-
1
-
-
0030457014
-
Ubiquitin-dependent protein degradation
-
Hochstrasser, M. (1996) Ubiquitin-dependent protein degradation. Annu. Rev. Genet. 30, 405-439
-
(1996)
Annu. Rev. Genet.
, vol.30
, pp. 405-439
-
-
Hochstrasser, M.1
-
2
-
-
0034296394
-
Basic Medical Research Award: The ubiquitin system
-
Hershko, A., Ciechanover, A., and Varshavsky, A. (2000) Basic Medical Research Award: the ubiquitin system. Nat. Med. 6, 1073-1081
-
(2000)
Nat. Med.
, vol.6
, pp. 1073-1081
-
-
Hershko, A.1
Ciechanover, A.2
Varshavsky, A.3
-
3
-
-
0035286734
-
Molecular dissection of autophagy: Two ubiquitin-like systems
-
Ohsumi, Y. (2001) Molecular dissection of autophagy: two ubiquitin-like systems. Nat. Rev. Mol. Cell Biol. 2, 211-216
-
(2001)
Nat. Rev. Mol. Cell Biol.
, vol.2
, pp. 211-216
-
-
Ohsumi, Y.1
-
4
-
-
64749083589
-
Protein quality control as a strategy for cellular regulation: Lessons from ubiquitin-mediated regulation of the sterol pathway
-
Hampton, R. Y., and Garza, R. M. (2009) Protein quality control as a strategy for cellular regulation: lessons from ubiquitin-mediated regulation of the sterol pathway. Chem. Rev. 109, 1561-1574
-
(2009)
Chem. Rev.
, vol.109
, pp. 1561-1574
-
-
Hampton, R.Y.1
Garza, R.M.2
-
5
-
-
84872102009
-
Design principles of a universal protein degradation machine
-
Matyskiela, M. E., and Martin, A. (2013) Design principles of a universal protein degradation machine. J. Mol. Biol. 425, 199-213
-
(2013)
J. Mol. Biol.
, vol.425
, pp. 199-213
-
-
Matyskiela, M.E.1
Martin, A.2
-
6
-
-
84878942836
-
Molecular architecture and assembly of the eukaryotic proteasome
-
Tomko, R. J., Jr., and Hochstrasser, M. (2013) Molecular architecture and assembly of the eukaryotic proteasome. Annu. Rev. Biochem. 82, 415-445
-
(2013)
Annu. Rev. Biochem.
, vol.82
, pp. 415-445
-
-
Tomko, R.J.1
Hochstrasser, M.2
-
7
-
-
84898807479
-
Deep classification of a large cryo-EM dataset defines the conformational landscape of the 26S proteasome
-
Unverdorben, P., Beck, F., led, P., Schweitzer, A., Pfeifer, G., Plitzko, J. M., Baumeister, W., and Förster, F. (2014) Deep classification of a large cryo-EM dataset defines the conformational landscape of the 26S proteasome. Proc. Natl. Acad. Sci. U.S.A. 111, 5544-5549
-
(2014)
Proc. Natl. Acad. Sci. U.S.A.
, vol.111
, pp. 5544-5549
-
-
Unverdorben, P.1
Beck, F.2
Led, P.3
Schweitzer, A.4
Pfeifer, G.5
Plitzko, J.M.6
Baumeister, W.7
Förster, F.8
-
8
-
-
0037852202
-
The proteasome: Structure, function, and role in the cell
-
Adams, J. (2003) The proteasome: structure, function, and role in the cell. Cancer Treat. Rev. 29, 3-9
-
(2003)
Cancer Treat. Rev.
, vol.29
, pp. 3-9
-
-
Adams, J.1
-
9
-
-
33847066706
-
Functions of the proteasome: From protein degradation and immune surveillance to cancer therapy
-
Goldberg, A. L. (2007) Functions of the proteasome: from protein degradation and immune surveillance to cancer therapy. Biochem. Soc. Trans. 35, 12-17
-
(2007)
Biochem. Soc. Trans.
, vol.35
, pp. 12-17
-
-
Goldberg, A.L.1
-
10
-
-
84924340276
-
Proteasome inhibitors as experimental therapeutics of autoimmune diseases
-
Verbrugge, S. E., Scheper, R. J., Lems, W. F., de Gruijl, T. D., and Jansen, G. (2015) Proteasome inhibitors as experimental therapeutics of autoimmune diseases. Arthritis Res. Ther. 17, 17
-
(2015)
Arthritis Res. Ther.
, vol.17
, pp. 17
-
-
Verbrugge, S.E.1
Scheper, R.J.2
Lems, W.F.3
De Gruijl, T.D.4
Jansen, G.5
-
11
-
-
65649115267
-
Recognition and processing of ubiquitin-protein conjugates by the proteasome
-
Finley, D. (2009) Recognition and processing of ubiquitin-protein conjugates by the proteasome. Annu. Rev. Biochem. 78, 477-513
-
(2009)
Annu. Rev. Biochem.
, vol.78
, pp. 477-513
-
-
Finley, D.1
-
12
-
-
0028999726
-
Biogenesis, structure, and function of the yeast 20S proteasome
-
Chen, P., and Hochstrasser, M. (1995) Biogenesis, structure, and function of the yeast 20S proteasome. EMBO J. 14, 2620-2630
-
(1995)
EMBO J.
, vol.14
, pp. 2620-2630
-
-
Chen, P.1
Hochstrasser, M.2
-
13
-
-
0030897031
-
Structure of 20S proteasome from yeast at 2.4 Å resolution
-
Groll, M., Ditzel, L., Löwe, J., Stock, D., Bochtler, M., Bartunik, H. D., and Huber, R. (1997) Structure of 20S proteasome from yeast at 2.4 Å resolution. Nature 386, 463-471
-
(1997)
Nature
, vol.386
, pp. 463-471
-
-
Groll, M.1
Ditzel, L.2
Löwe, J.3
Stock, D.4
Bochtler, M.5
Bartunik, H.D.6
Huber, R.7
-
14
-
-
0029042511
-
Crystal structure of the 20S proteasome from the archaeon T. Acidophilum at 3.4 Å resolution
-
Löwe, J., Stock, D., Jap, B., Zwickl, P., Baumeister, W., and Huber, R. (1995) Crystal structure of the 20S proteasome from the archaeon T. acidophilum at 3.4 Å resolution. Science 268, 533-539
-
(1995)
Science
, vol.268
, pp. 533-539
-
-
Löwe, J.1
Stock, D.2
Jap, B.3
Zwickl, P.4
Baumeister, W.5
Huber, R.6
-
15
-
-
0028972449
-
A protein catalytic framework with an N-terminal nucleophile is capable of self-activation
-
Brannigan, J. A., Dodson, G., Duggleby, H. J., Moody, P. C., Smith, J. L., Tomchick, D. R., and Murzin, A. G. (1995) A protein catalytic framework with an N-terminal nucleophile is capable of self-activation. Nature 378, 416-419
-
(1995)
Nature
, vol.378
, pp. 416-419
-
-
Brannigan, J.A.1
Dodson, G.2
Duggleby, H.J.3
Moody, P.C.4
Smith, J.L.5
Tomchick, D.R.6
Murzin, A.G.7
-
16
-
-
0036017391
-
Protein degradation and the generation of MHC class I-presented peptides
-
Rock, K. L., York, I. A., Saric, T., and Goldberg, A. L. (2002) Protein degradation and the generation of MHC class I-presented peptides. Adv. Immunol. 80, 1-70
-
(2002)
Adv. Immunol.
, vol.80
, pp. 1-70
-
-
Rock, K.L.1
York, I.A.2
Saric, T.3
Goldberg, A.L.4
-
17
-
-
21544475903
-
IFN-γ-induced immune adaptation of the proteasome system is an accelerated and transient response
-
Heink, S., Ludwig, D., Kloetzel, P. M., and Krüger, E. (2005) IFN-γ-induced immune adaptation of the proteasome system is an accelerated and transient response. Proc. Natl. Acad. Sci. U.S.A. 102, 9241-9246
-
(2005)
Proc. Natl. Acad. Sci. U.S.A.
, vol.102
, pp. 9241-9246
-
-
Heink, S.1
Ludwig, D.2
Kloetzel, P.M.3
Krüger, E.4
-
18
-
-
34249883977
-
Regulation of CD8+ T cell development by thymus-specific proteasomes
-
Murata, S., Sasaki, K., Kishimoto, T., Niwa, S., Hayashi, H., Takahama, Y., and Tanaka, K. (2007) Regulation of CD8+ T cell development by thymus-specific proteasomes. Science 316, 1349-1353
-
(2007)
Science
, vol.316
, pp. 1349-1353
-
-
Murata, S.1
Sasaki, K.2
Kishimoto, T.3
Niwa, S.4
Hayashi, H.5
Takahama, Y.6
Tanaka, K.7
-
19
-
-
83455178837
-
Proteasome structure, function, and lessons learned from β-lactone inhibitors
-
Groll, M., and Potts, B. C. (2011) Proteasome structure, function, and lessons learned from β-lactone inhibitors. Curr. Top. Med. Chem. 11, 2850-2878
-
(2011)
Curr. Top. Med. Chem.
, vol.11
, pp. 2850-2878
-
-
Groll, M.1
Potts, B.C.2
-
20
-
-
84876916040
-
Structural biology of the proteasome
-
Kish-Trier, E., and Hill, C. P. (2013) Structural biology of the proteasome. Annu. Rev. Biophys. 42, 29-49
-
(2013)
Annu. Rev. Biophys.
, vol.42
, pp. 29-49
-
-
Kish-Trier, E.1
Hill, C.P.2
-
22
-
-
54049107641
-
Some assembly required: Dedicated chaperones in eukaryotic proteasome biogenesis
-
Kusmierczyk, A. R., and Hochstrasser, M. (2008) Some assembly required: dedicated chaperones in eukaryotic proteasome biogenesis. Biol. Chem. 389, 1143-1151
-
(2008)
Biol. Chem.
, vol.389
, pp. 1143-1151
-
-
Kusmierczyk, A.R.1
Hochstrasser, M.2
-
23
-
-
58849093135
-
Molecular mechanisms of proteasome assembly
-
Murata, S., Yashiroda, H., and Tanaka, K. (2009) Molecular mechanisms of proteasome assembly. Nat. Rev. Mol. Cell Biol. 10, 104-115
-
(2009)
Nat. Rev. Mol. Cell Biol.
, vol.10
, pp. 104-115
-
-
Murata, S.1
Yashiroda, H.2
Tanaka, K.3
-
24
-
-
76449099938
-
Chaperone-assisted assembly of the proteasome core particle
-
Matias, A. C., Ramos, P. C., and Dohmen, R. J. (2010) Chaperone-assisted assembly of the proteasome core particle. Biochem. Soc. Trans. 38, 29-33
-
(2010)
Biochem. Soc. Trans.
, vol.38
, pp. 29-33
-
-
Matias, A.C.1
Ramos, P.C.2
Dohmen, R.J.3
-
25
-
-
0032548998
-
Ump1p is required for proper maturation of the 20S proteasome and becomes its substrate upon completion of the assembly
-
Ramos, P. C., Höckendorff, J., Johnson, E. S., Varshavsky, A., and Dohmen, R. J. (1998) Ump1p is required for proper maturation of the 20S proteasome and becomes its substrate upon completion of the assembly. Cell 92, 489-499
-
(1998)
Cell
, vol.92
, pp. 489-499
-
-
Ramos, P.C.1
Höckendorff, J.2
Johnson, E.S.3
Varshavsky, A.4
Dohmen, R.J.5
-
26
-
-
34247617365
-
β-Subunit appendages promote 20S proteasome assembly by overcoming an Ump1-dependent checkpoint
-
Li, X., Kusmierczyk, A. R., Wong, P., Emili, A., and Hochstrasser, M. (2007) β-Subunit appendages promote 20S proteasome assembly by overcoming an Ump1-dependent checkpoint. EMBO J. 26, 2339-2349
-
(2007)
EMBO J.
, vol.26
, pp. 2339-2349
-
-
Li, X.1
Kusmierczyk, A.R.2
Wong, P.3
Emili, A.4
Hochstrasser, M.5
-
27
-
-
0028178515
-
20S proteasomes are assembled via distinct precursor complexes: Processing of LMP2 and LMP7 proproteins takes place in 13-16S preproteasome complexes
-
Frentzel, S., Pesold-Hurt, B., Seelig, A., and Kloetzel, P.-M. (1994) 20S proteasomes are assembled via distinct precursor complexes: processing of LMP2 and LMP7 proproteins takes place in 13-16S preproteasome complexes. J. Mol. Biol. 236, 975-981
-
(1994)
J. Mol. Biol.
, vol.236
, pp. 975-981
-
-
Frentzel, S.1
Pesold-Hurt, B.2
Seelig, A.3
Kloetzel, P.-M.4
-
28
-
-
0030481129
-
Analysis of mammalian 20S proteasome biogenesis: The maturation of β-subunits is an ordered two-step mechanism involving autocatalysis
-
Schmidtke, G., Kraft, R., Kostka, S., Henklein, P., Frömmel, C., Löwe, J., Huber, R., Kloetzel, P. M., and Schmidt, M. (1996) Analysis of mammalian 20S proteasome biogenesis: the maturation of β-subunits is an ordered two-step mechanism involving autocatalysis. EMBO J. 15, 6887-6898
-
(1996)
EMBO J.
, vol.15
, pp. 6887-6898
-
-
Schmidtke, G.1
Kraft, R.2
Kostka, S.3
Henklein, P.4
Frömmel, C.5
Löwe, J.6
Huber, R.7
Kloetzel, P.M.8
Schmidt, M.9
-
29
-
-
0030880547
-
Intermediates in the formation of mouse 20S proteasomes: Implications for the assembly of precursor β subunits
-
Nandi, D., Woodward, E., Ginsburg, D. B., and Monaco, J. J. (1997) Intermediates in the formation of mouse 20S proteasomes: implications for the assembly of precursor β subunits. EMBO J. 16, 5363-5375
-
(1997)
EMBO J.
, vol.16
, pp. 5363-5375
-
-
Nandi, D.1
Woodward, E.2
Ginsburg, D.B.3
Monaco, J.J.4
-
30
-
-
84941012942
-
Proteasome assembly from 15S precursors involves major conformational changes and recycling of the Pba1-Pba2 chaperone
-
Kock, M., Nunes, M. M., Hemann, M., Kube, S., Dohmen, R. J., Herzog, F., Ramos, P. C., and Wendler, P. (2015) Proteasome assembly from 15S precursors involves major conformational changes and recycling of the Pba1-Pba2 chaperone. Nat. Commun. 6, 6123
-
(2015)
Nat. Commun.
, vol.6
, pp. 6123
-
-
Kock, M.1
Nunes, M.M.2
Hemann, M.3
Kube, S.4
Dohmen, R.J.5
Herzog, F.6
Ramos, P.C.7
Wendler, P.8
-
31
-
-
49949109912
-
Dissecting β-ring assembly pathway of the mammalian 20S proteasome
-
Hirano, Y., Kaneko, T., Okamoto, K., Bai, M., Yashiroda, H., Furuyama, K., Kato, K., Tanaka, K., and Murata, S. (2008) Dissecting β-ring assembly pathway of the mammalian 20S proteasome. EMBO J. 27, 2204-2213
-
(2008)
EMBO J.
, vol.27
, pp. 2204-2213
-
-
Hirano, Y.1
Kaneko, T.2
Okamoto, K.3
Bai, M.4
Yashiroda, H.5
Furuyama, K.6
Kato, K.7
Tanaka, K.8
Murata, S.9
-
32
-
-
85027955696
-
Aconserved 20S proteasome assembly factor requires a C-terminal HbYX motif for proteasomal precursor binding
-
Kusmierczyk, A. R., Kunjappu, M. J., Kim, R. Y., and Hochstrasser, M. (2011)Aconserved 20S proteasome assembly factor requires a C-terminal HbYX motif for proteasomal precursor binding. Nat. Struct. Mol. Biol. 18, 622-629
-
(2011)
Nat. Struct. Mol. Biol.
, vol.18
, pp. 622-629
-
-
Kusmierczyk, A.R.1
Kunjappu, M.J.2
Kim, R.Y.3
Hochstrasser, M.4
-
33
-
-
40949120953
-
Crystal structure of a chaperone complex that contributes to the assembly of yeast 20S proteasomes
-
Yashiroda, H., Mizushima, T., Okamoto, K., Kameyama, T., Hayashi, H., Kishimoto, T., Niwa, S., Kasahara, M., Kurimoto, E., Sakata, E., Takagi, K., Suzuki, A., Hirano, Y., Murata, S., Kato, K., Yamane, T., and Tanaka, K. (2008) Crystal structure of a chaperone complex that contributes to the assembly of yeast 20S proteasomes. Nat. Struct. Mol. Biol. 15, 228-236
-
(2008)
Nat. Struct. Mol. Biol.
, vol.15
, pp. 228-236
-
-
Yashiroda, H.1
Mizushima, T.2
Okamoto, K.3
Kameyama, T.4
Hayashi, H.5
Kishimoto, T.6
Niwa, S.7
Kasahara, M.8
Kurimoto, E.9
Sakata, E.10
Takagi, K.11
Suzuki, A.12
Hirano, Y.13
Murata, S.14
Kato, K.15
Yamane, T.16
Tanaka, K.17
-
34
-
-
84925652317
-
Maturation of the proteasome core particle induces an affinity switch that controls regulatory particle association
-
Wani, P. S., Rowland, M. A., Ondracek, A., Deeds, E. J., and Roelofs, J. (2015) Maturation of the proteasome core particle induces an affinity switch that controls regulatory particle association. Nat. Commun. 6, 6384
-
(2015)
Nat. Commun.
, vol.6
, pp. 6384
-
-
Wani, P.S.1
Rowland, M.A.2
Ondracek, A.3
Deeds, E.J.4
Roelofs, J.5
-
35
-
-
0344687318
-
Crystal structures of the Rhodococcus proteasome with and without its pro-peptides: Implications for the role of the pro-peptide in proteasome assembly
-
Kwon, Y. D., Nagy, I., Adams, P. D., Baumeister, W., and Jap, B. K. (2004) Crystal structures of the Rhodococcus proteasome with and without its pro-peptides: implications for the role of the pro-peptide in proteasome assembly. J. Mol. Biol. 335, 233-245
-
(2004)
J. Mol. Biol.
, vol.335
, pp. 233-245
-
-
Kwon, Y.D.1
Nagy, I.2
Adams, P.D.3
Baumeister, W.4
Jap, B.K.5
-
36
-
-
0030595329
-
Autocatalytic subunit processing couples active site formation in the 20S proteasome to completion of assembly
-
Chen, P., and Hochstrasser, M. (1996) Autocatalytic subunit processing couples active site formation in the 20S proteasome to completion of assembly. Cell 86, 961-972
-
(1996)
Cell
, vol.86
, pp. 961-972
-
-
Chen, P.1
Hochstrasser, M.2
-
37
-
-
0040008534
-
Proteasome β-type subunits: Unequal roles of propeptides in core particle maturation and a hierarchy of active site function
-
Jäger, S., Groll, M., Huber, R., Wolf, D. H., and Heinemeyer, W. (1999) Proteasome β-type subunits: unequal roles of propeptides in core particle maturation and a hierarchy of active site function. J. Mol. Biol. 291, 997-1013
-
(1999)
J. Mol. Biol.
, vol.291
, pp. 997-1013
-
-
Jäger, S.1
Groll, M.2
Huber, R.3
Wolf, D.H.4
Heinemeyer, W.5
-
38
-
-
79952184736
-
-
Academic Press, San Diego, CA
-
Guthrie, C., and Fink, G. R. (2002) Guide to Yeast Genetics and Molecular and Cell Biology, Academic Press, San Diego, CA
-
(2002)
Guide to Yeast Genetics and Molecular and Cell Biology
-
-
Guthrie, C.1
Fink, G.R.2
-
39
-
-
0024266139
-
New yeast-Escherichia coli shuttle vectors constructed with in vitro mutagenized yeast genes lacking six-base pair restriction sites
-
Gietz, R. D., and Sugino, A. (1988) New yeast-Escherichia coli shuttle vectors constructed with in vitro mutagenized yeast genes lacking six-base pair restriction sites. Gene 74, 527-534
-
(1988)
Gene
, vol.74
, pp. 527-534
-
-
Gietz, R.D.1
Sugino, A.2
-
40
-
-
0036134273
-
Two-stage polymerase chain reaction protocol allowing introduction of multiple mutations, deletions, and insertions, using QuikChange site-directed mutagenesis
-
Wang, W., and Malcolm, B. A. (2002) Two-stage polymerase chain reaction protocol allowing introduction of multiple mutations, deletions, and insertions, using QuikChange site-directed mutagenesis. Methods Mol. Biol. 182, 37-43
-
(2002)
Methods Mol. Biol.
, vol.182
, pp. 37-43
-
-
Wang, W.1
Malcolm, B.A.2
-
41
-
-
0028953840
-
Yeast vectors for the con-trolled expression of heterologous proteins in different genetic backgrounds
-
Mumberg, D., Müller, R., and Funk, M. (1995) Yeast vectors for the con-trolled expression of heterologous proteins in different genetic backgrounds. Gene 156, 119-122
-
(1995)
Gene
, vol.156
, pp. 119-122
-
-
Mumberg, D.1
Müller, R.2
Funk, M.3
-
42
-
-
0033168717
-
Eukaryotic 20S proteasome catalytic subunit propeptides prevent active site inactivation by N-terminal acetylation and promote particle assembly
-
Arendt, C. S., and Hochstrasser, M. (1999) Eukaryotic 20S proteasome catalytic subunit propeptides prevent active site inactivation by N-terminal acetylation and promote particle assembly. EMBO J. 18, 3575-3585
-
(1999)
EMBO J.
, vol.18
, pp. 3575-3585
-
-
Arendt, C.S.1
Hochstrasser, M.2
-
43
-
-
0021668558
-
A positive selection for mutants lacking orotidine-5′-phosphate decarboxylase activity in yeast: 5 fluoro-orotic acid resistance
-
Boeke, J. D., LaCroute, F., and Fink, G. R. (1984) A positive selection for mutants lacking orotidine-5′-phosphate decarboxylase activity in yeast: 5 fluoro-orotic acid resistance. Mol. Gen. Genet. 197, 345-346
-
(1984)
Mol. Gen. Genet.
, vol.197
, pp. 345-346
-
-
Boeke, J.D.1
LaCroute, F.2
Fink, G.R.3
-
44
-
-
0030763146
-
A septin-based hierarchy of proteins required for localized deposition of chitin in the Saccharomyces cerevisiae cell wall
-
DeMarini, D. J., Adams, A. E., Fares, H., De Virgilio, C., Valle, G., Chuang, J. S., and Pringle, J. R. (1997) A septin-based hierarchy of proteins required for localized deposition of chitin in the Saccharomyces cerevisiae cell wall. J. Cell Biol. 139, 75-93
-
(1997)
J. Cell Biol.
, vol.139
, pp. 75-93
-
-
DeMarini, D.J.1
Adams, A.E.2
Fares, H.3
De Virgilio, C.4
Valle, G.5
Chuang, J.S.6
Pringle, J.R.7
-
45
-
-
0025331090
-
In vivo degradation of a transcriptional regulator: The yeast α2 repressor
-
Hochstrasser, M., and Varshavsky, A. (1990) In vivo degradation of a transcriptional regulator: the yeast α2 repressor. Cell 61, 697-708
-
(1990)
Cell
, vol.61
, pp. 697-708
-
-
Hochstrasser, M.1
Varshavsky, A.2
-
46
-
-
0023472472
-
Tricine-sodium dodecyl sulfatepolyacrylamide gel electrophoresis for the separation of proteins in the range from 1 to 100 kDa
-
Schägger, H., and von Jagow, G. (1987) Tricine-sodium dodecyl sulfatepolyacrylamide gel electrophoresis for the separation of proteins in the range from 1 to 100 kDa. Anal. Biochem. 166, 368-379
-
(1987)
Anal. Biochem.
, vol.166
, pp. 368-379
-
-
Schägger, H.1
Von Jagow, G.2
-
47
-
-
0027198563
-
Multiple ubiquitin-conjugating enzymes participate in the in vivo degradation of the yeast MATα2 repressor
-
Chen, P., Johnson, P., Sommer, T., Jentsch, S., and Hochstrasser, M. (1993) Multiple ubiquitin-conjugating enzymes participate in the in vivo degradation of the yeast MATα2 repressor. Cell 74, 357-369
-
(1993)
Cell
, vol.74
, pp. 357-369
-
-
Chen, P.1
Johnson, P.2
Sommer, T.3
Jentsch, S.4
Hochstrasser, M.5
-
48
-
-
1442264792
-
Plasticity in eucaryotic 20S proteasome ring assembly revealed by a subunit deletion in yeast
-
Velichutina, I., Connerly, P. L., Arendt, C. S., Li, X., and Hochstrasser, M. (2004) Plasticity in eucaryotic 20S proteasome ring assembly revealed by a subunit deletion in yeast. EMBO J. 23, 500-510
-
(2004)
EMBO J.
, vol.23
, pp. 500-510
-
-
Velichutina, I.1
Connerly, P.L.2
Arendt, C.S.3
Li, X.4
Hochstrasser, M.5
-
49
-
-
84949197206
-
Proteasomes: Isolation and activity assays
-
Li, Y., Tomko, R. J., Jr., and Hochstrasser, M. (2015) Proteasomes: isolation and activity assays. Curr. Protoc. Cell Biol. 67, 3.43.1-3.43.20
-
(2015)
Curr. Protoc. Cell Biol.
, vol.67
, pp. 3431-34320
-
-
Li, Y.1
Tomko, R.J.2
Hochstrasser, M.3
-
50
-
-
0028907938
-
Genes encoded in the major histocompatibility complex affecting the generation of peptides for TAP transport
-
Cerundolo, V., Kelly, A., Elliott, T., Trowsdale, J., and Townsend, A. (1995) Genes encoded in the major histocompatibility complex affecting the generation of peptides for TAP transport. Eur. J. Immunol. 25, 554-562
-
(1995)
Eur. J. Immunol.
, vol.25
, pp. 554-562
-
-
Cerundolo, V.1
Kelly, A.2
Elliott, T.3
Trowsdale, J.4
Townsend, A.5
-
51
-
-
0034604384
-
Characterisation of the newly identified human Ump1 homologue POMP and analysis of LMP7(β 5i) incorporation into 20 S proteasomes
-
Witt, E., Zantopf, D., Schmidt, M., Kraft, R., Kloetzel, P. M., and Krüger, E. (2000) Characterisation of the newly identified human Ump1 homologue POMP and analysis of LMP7(β 5i) incorporation into 20 S proteasomes. J. Mol. Biol. 301, 1-9
-
(2000)
J. Mol. Biol.
, vol.301
, pp. 1-9
-
-
Witt, E.1
Zantopf, D.2
Schmidt, M.3
Kraft, R.4
Kloetzel, P.M.5
Krüger, E.6
-
52
-
-
0030737501
-
Identification of the yeast 20S proteasome catalytic centers and subunit interactions required for activesite formation
-
Arendt, C. S., and Hochstrasser, M. (1997) Identification of the yeast 20S proteasome catalytic centers and subunit interactions required for activesite formation. Proc. Natl. Acad. Sci. U.S.A. 94, 7156-7161
-
(1997)
Proc. Natl. Acad. Sci. U.S.A.
, vol.94
, pp. 7156-7161
-
-
Arendt, C.S.1
Hochstrasser, M.2
-
53
-
-
0033613196
-
The catalytic sites of 20S proteasomes and their role in subunit maturation: A mutational and crystallographic study
-
Groll, M., Heinemeyer, W., Jäger, S., Ullrich, T., Bochtler, M., Wolf, D. H., and Huber, R. (1999) The catalytic sites of 20S proteasomes and their role in subunit maturation: a mutational and crystallographic study. Proc. Natl. Acad. Sci. U.S.A. 96, 10976-10983
-
(1999)
Proc. Natl. Acad. Sci. U.S.A.
, vol.96
, pp. 10976-10983
-
-
Groll, M.1
Heinemeyer, W.2
Jäger, S.3
Ullrich, T.4
Bochtler, M.5
Wolf, D.H.6
Huber, R.7
-
54
-
-
0027418063
-
PRE2, highly homologous to the human major histocompatibility complex-linked RING10 gene, codes for yeast proteasome subunit necessary for chymotrypsin activity and degradation of ubiquitinated proteins
-
Heinemeyer, W., Gruhler, A., Möhrle, V., Mahé, Y., and Wolf, D. H. (1993) PRE2, highly homologous to the human major histocompatibility complex-linked RING10 gene, codes for yeast proteasome subunit necessary for chymotrypsin activity and degradation of ubiquitinated proteins. J. Biol. Chem. 268, 5115-5120
-
(1993)
J. Biol. Chem.
, vol.268
, pp. 5115-5120
-
-
Heinemeyer, W.1
Gruhler, A.2
Möhrle, V.3
Mahé, Y.4
Wolf, D.H.5
-
55
-
-
84901302032
-
Degradation of centromeric histone H3 variant Cse4 requires the Fpr3 peptidyl-prolyl cis-trans isomerase
-
Ohkuni, K., Abdulle, R., and Kitagawa, K. (2014) Degradation of centromeric histone H3 variant Cse4 requires the Fpr3 peptidyl-prolyl cis-trans isomerase. Genetics 196, 1041-1045
-
(2014)
Genetics
, vol.196
, pp. 1041-1045
-
-
Ohkuni, K.1
Abdulle, R.2
Kitagawa, K.3
-
56
-
-
0028695223
-
The eIF-2 alpha kinases: Regulators of protein synthesis in starvation and stress
-
Hinnebusch, A. G. (1994) The eIF-2 alpha kinases: regulators of protein synthesis in starvation and stress. Semin. Cell Biol. 5, 417-426
-
(1994)
Semin. Cell Biol.
, vol.5
, pp. 417-426
-
-
Hinnebusch, A.G.1
-
57
-
-
84891707361
-
EIF5A promotes translation of polyproline motifs
-
Gutierrez, E., Shin, B. S., Woolstenhulme, C. J., Kim, J. R., Saini, P., Buskirk, A. R., and Dever, T. E. (2013) eIF5A promotes translation of polyproline motifs. Mol. Cell 51, 35-45
-
(2013)
Mol. Cell
, vol.51
, pp. 35-45
-
-
Gutierrez, E.1
Shin, B.S.2
Woolstenhulme, C.J.3
Kim, J.R.4
Saini, P.5
Buskirk, A.R.6
Dever, T.E.7
-
58
-
-
0025242338
-
The OLE1 gene of Saccharomyces cerevisiae encodes the delta 9 fatty acid desaturase and can be functionally replaced by the rat stearoyl-CoA desaturase gene
-
Stukey, J. E., McDonough, V. M., and Martin, C. E. (1990) The OLE1 gene of Saccharomyces cerevisiae encodes the delta 9 fatty acid desaturase and can be functionally replaced by the rat stearoyl-CoA desaturase gene. J. Biol. Chem. 265, 20144-20149
-
(1990)
J. Biol. Chem.
, vol.265
, pp. 20144-20149
-
-
Stukey, J.E.1
McDonough, V.M.2
Martin, C.E.3
-
59
-
-
0034268493
-
Activation of a membrane-bound transcription factor by regulated ubiquitin/proteasome-dependent processing
-
Hoppe, T., Matuschewski, K., Rape, M., Schlenker, S., Ulrich, H. D., and Jentsch, S. (2000) Activation of a membrane-bound transcription factor by regulated ubiquitin/proteasome-dependent processing. Cell 102, 577-586
-
(2000)
Cell
, vol.102
, pp. 577-586
-
-
Hoppe, T.1
Matuschewski, K.2
Rape, M.3
Schlenker, S.4
Ulrich, H.D.5
Jentsch, S.6
-
60
-
-
36849024844
-
The C-terminal extension of the β7 subunit and activator complexes stabilize nascent 20S proteasomes and promote their maturation
-
Marques, A. J., Glanemann, C., Ramos, P. C., and Dohmen, R. J. (2007) The C-terminal extension of the β7 subunit and activator complexes stabilize nascent 20S proteasomes and promote their maturation. J. Biol. Chem. 282, 34869-34876
-
(2007)
J. Biol. Chem.
, vol.282
, pp. 34869-34876
-
-
Marques, A.J.1
Glanemann, C.2
Ramos, P.C.3
Dohmen, R.J.4
-
61
-
-
63849246525
-
Protein structure prediction on the Web: A case study using the Phyre server
-
Kelley, L. A., and Sternberg, M. J. (2009) Protein structure prediction on the Web: a case study using the Phyre server. Nat. Protoc. 4, 363-371
-
(2009)
Nat. Protoc.
, vol.4
, pp. 363-371
-
-
Kelley, L.A.1
Sternberg, M.J.2
-
62
-
-
84863088025
-
The proteasome system in infection: Impact of β5 and LMP7 on composition, maturation, and quantity of active proteasome complexes
-
Joeris, T., Schmidt, N., Ermert, D., Krienke, P., Visekruna, A., Kuckelkorn, U., Kaufmann, S. H., and Steinhoff, U. (2012) The proteasome system in infection: impact of β5 and LMP7 on composition, maturation, and quantity of active proteasome complexes. PLoS ONE 7, e39827
-
(2012)
PLoS ONE
, vol.7
-
-
Joeris, T.1
Schmidt, N.2
Ermert, D.3
Krienke, P.4
Visekruna, A.5
Kuckelkorn, U.6
Kaufmann, S.H.7
Steinhoff, U.8
-
63
-
-
0034604609
-
Novel propeptide function in 20 S proteasome assembly influences β subunit composition
-
Kingsbury, D. J., Griffin, T. A., and Colbert, R. A. (2000) Novel propeptide function in 20 S proteasome assembly influences β subunit composition. J. Biol. Chem. 275, 24156-24162
-
(2000)
J. Biol. Chem.
, vol.275
, pp. 24156-24162
-
-
Kingsbury, D.J.1
Griffin, T.A.2
Colbert, R.A.3
-
64
-
-
84930352736
-
Assembly mechanisms of specialized core particles of the proteasome
-
Bai, M., Zhao, X., Sahara, K., Ohte, Y., Hirano, Y., Kaneko, T., Yashiroda, H., and Murata, S. (2014) Assembly mechanisms of specialized core particles of the proteasome. Biomolecules 4, 662-677
-
(2014)
Biomolecules
, vol.4
, pp. 662-677
-
-
Bai, M.1
Zhao, X.2
Sahara, K.3
Ohte, Y.4
Hirano, Y.5
Kaneko, T.6
Yashiroda, H.7
Murata, S.8
-
65
-
-
0035841193
-
Two-hybrid analysis of the Saccharomyces cerevisiae 26S proteasome
-
Cagney, G., Uetz, P., and Fields, S. (2001) Two-hybrid analysis of the Saccharomyces cerevisiae 26S proteasome. Physiol. Genomics 7, 27-34
-
(2001)
Physiol. Genomics
, vol.7
, pp. 27-34
-
-
Cagney, G.1
Uetz, P.2
Fields, S.3
-
66
-
-
0028034043
-
A novel FK506-and rapamycin-binding protein (FPR3 gene product) in the yeast Saccharomyces cerevisiae is a proline rotamase localized to the nucleolus
-
Benton, B. M., Zang, J. H., and Thorner, J. (1994) A novel FK506-and rapamycin-binding protein (FPR3 gene product) in the yeast Saccharomyces cerevisiae is a proline rotamase localized to the nucleolus. J. Cell Biol. 127, 623-639
-
(1994)
J. Cell Biol.
, vol.127
, pp. 623-639
-
-
Benton, B.M.1
Zang, J.H.2
Thorner, J.3
-
67
-
-
0032569036
-
Conformational constraints for protein self-cleavage in the proteasome
-
Ditzel, L., Huber, R., Mann, K., Heinemeyer, W., Wolf, D. H., and Groll, M. (1998) Conformational constraints for protein self-cleavage in the proteasome. J. Mol. Biol. 279, 1187-1191
-
(1998)
J. Mol. Biol.
, vol.279
, pp. 1187-1191
-
-
Ditzel, L.1
Huber, R.2
Mann, K.3
Heinemeyer, W.4
Wolf, D.H.5
Groll, M.6
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