-
1
-
-
0032867676
-
The 26S proteasome: A molecular machine designed for controlled proteolysis
-
Voges, D., Zwickl, P., Baumeister, W. The 26S proteasome: a molecular machine designed for controlled proteolysis. Annu. Rev. Biochem. 68, 1015-1068 (1999).
-
(1999)
Annu. Rev. Biochem.
, vol.68
, pp. 1015-1068
-
-
Voges, D.1
Zwickl, P.2
Baumeister, W.3
-
2
-
-
0002709230
-
Proteasome inhibitors block development of Plasmodium spp
-
Gantt, S. M. et al. Proteasome inhibitors block development of Plasmodium spp. Antimicrob. Agents Chemother. 42, 2731-2738 (1998).
-
(1998)
Antimicrob. Agents Chemother.
, vol.42
, pp. 2731-2738
-
-
Gantt, S.M.1
-
3
-
-
70349318582
-
The proteasome inhibitor epoxomicin has potent Plasmodium falciparum gametocytocidal activity
-
Czesny, B., Goshu, S., Cook, J. L., Williamson, K. C. The proteasome inhibitor epoxomicin has potent Plasmodium falciparum gametocytocidal activity. Antimicrob. Agents Chemother. 53, 4080-4085 (2009).
-
(2009)
Antimicrob. Agents Chemother.
, vol.53
, pp. 4080-4085
-
-
Czesny, B.1
Goshu, S.2
Cook, J.L.3
Williamson, K.C.4
-
4
-
-
54049112217
-
Comprehensive study of proteasome inhibitors against Plasmodium falciparum laboratory strains and field isolates from Gabon
-
Kreidenweiss, A., Kremsner, P. G., Mordmüller, B. Comprehensive study of proteasome inhibitors against Plasmodium falciparum laboratory strains and field isolates from Gabon. Malar. J. 7, 187 (2008).
-
(2008)
Malar. J.
, vol.7
, pp. 187
-
-
Kreidenweiss, A.1
Kremsner, P.G.2
Mordmüller, B.3
-
5
-
-
48449087926
-
Marine actinomycetes: A new source of compounds against the human malaria parasite
-
Prudhomme, J. et al. Marine actinomycetes: a new source of compounds against the human malaria parasite. PLoS ONE 3, e2335 (2008).
-
(2008)
PLoS ONE
, vol.3
, pp. e2335
-
-
Prudhomme, J.1
-
6
-
-
84897738649
-
Blocking Plasmodium falciparum development via dual inhibition of hemoglobin degradation and the ubiquitin proteasome system by MG132
-
Prasad, R. et al. Blocking Plasmodium falciparum development via dual inhibition of hemoglobin degradation and the ubiquitin proteasome system by MG132. PLoS ONE 8, e73530 (2013).
-
(2013)
PLoS ONE
, vol.8
, pp. e73530
-
-
Prasad, R.1
-
7
-
-
84921785363
-
Population transcriptomics of human malaria parasites reveals the mechanism of artemisinin resistance
-
Mok, S. et al. Population transcriptomics of human malaria parasites reveals the mechanism of artemisinin resistance. Science 347, 431-435 (2015).
-
(2015)
Science
, vol.347
, pp. 431-435
-
-
Mok, S.1
-
8
-
-
84928814749
-
A molecular mechanism of artemisinin resistance in Plasmodium falciparum malaria
-
Mbengue, A. et al. A molecular mechanism of artemisinin resistance in Plasmodium falciparum malaria. Nature 520, 683-687 (2015).
-
(2015)
Nature
, vol.520
, pp. 683-687
-
-
Mbengue, A.1
-
9
-
-
84861464856
-
The proteasome of malaria parasites: A multi-stage drug target for chemotherapeutic intervention?
-
Aminake, M. N., Arndt, H. D., Pradel, G. The proteasome of malaria parasites: a multi-stage drug target for chemotherapeutic intervention? Int. J. Parasitol. Drugs Drug Resist. 2, 1-10 (2012).
-
(2012)
Int. J. Parasitol. Drugs Drug Resist.
, vol.2
, pp. 1-10
-
-
Aminake, M.N.1
Arndt, H.D.2
Pradel, G.3
-
10
-
-
84906264786
-
Assessing subunit dependency of the Plasmodium proteasome using small molecule inhibitors and active site probes
-
Li, H. et al. Assessing subunit dependency of the Plasmodium proteasome using small molecule inhibitors and active site probes. ACS Chem. Biol. 9, 1869-1876 (2014).
-
(2014)
ACS Chem. Biol.
, vol.9
, pp. 1869-1876
-
-
Li, H.1
-
11
-
-
84871609304
-
Validation of the proteasome as a therapeutic target in Plasmodium using an epoxyketone inhibitor with parasite-specific toxicity
-
Li, H. et al. Validation of the proteasome as a therapeutic target in Plasmodium using an epoxyketone inhibitor with parasite-specific toxicity. Chem. Biol. 19, 1535-1545 (2012).
-
(2012)
Chem. Biol.
, vol.19
, pp. 1535-1545
-
-
Li, H.1
-
13
-
-
84949141033
-
Identification of potent and selective non-covalent inhibitors of the Plasmodium falciparum proteasome
-
Li, H. et al. Identification of potent and selective non-covalent inhibitors of the Plasmodium falciparum proteasome. J. Am. Chem. Soc. 136, 13562-13565 (2014).
-
(2014)
J. Am. Chem. Soc.
, vol.136
, pp. 13562-13565
-
-
Li, H.1
-
14
-
-
84935897110
-
Destructin-1 is a collagen-degrading endopeptidase secreted by Pseudogymnoascus destructans, the causative agent of white-nose syndrome
-
O'Donoghue, A. J. et al. Destructin-1 is a collagen-degrading endopeptidase secreted by Pseudogymnoascus destructans, the causative agent of white-nose syndrome. Proc. Natl Acad. Sci. USA 112, 7478-7483 (2015).
-
(2015)
Proc. Natl Acad. Sci. USA
, vol.112
, pp. 7478-7483
-
-
O'Donoghue, A.J.1
-
15
-
-
84869088814
-
Global identification of peptidase specificity by multiplex substrate profiling
-
O'Donoghue, A. J. et al. Global identification of peptidase specificity by multiplex substrate profiling. Nature Methods 9, 1095-1100 (2012).
-
(2012)
Nature Methods
, vol.9
, pp. 1095-1100
-
-
O'Donoghue, A.J.1
-
16
-
-
70350732744
-
Improved visualization of protein consensus sequences by iceLogo
-
Colaert, N., Helsens, K., Martens, L., Vandekerckhove, J., Gevaert, K. Improved visualization of protein consensus sequences by iceLogo. Nature Methods 6, 786-787 (2009).
-
(2009)
Nature Methods
, vol.6
, pp. 786-787
-
-
Colaert, N.1
Helsens, K.2
Martens, L.3
Vandekerckhove, J.4
Gevaert, K.5
-
17
-
-
0035542852
-
Substrate specificity of the human proteasome
-
Harris, J. L., Alper, P. B., Li, J., Rechsteiner, M., Backes, B. J. Substrate specificity of the human proteasome. Chem. Biol. 8, 1131-1141 (2001).
-
(2001)
Chem. Biol.
, vol.8
, pp. 1131-1141
-
-
Harris, J.L.1
Alper, P.B.2
Li, J.3
Rechsteiner, M.4
Backes, B.J.5
-
18
-
-
84856373151
-
Proteasome inhibitors: An expanding army attacking a unique target
-
Kisselev, A. F., van der Linden, W. A., Overkleeft, H. S. Proteasome inhibitors: an expanding army attacking a unique target. Chem. Biol. 19, 99-115 (2012).
-
(2012)
Chem. Biol.
, vol.19
, pp. 99-115
-
-
Kisselev, A.F.1
Van Der Linden, W.A.2
Overkleeft, H.S.3
-
19
-
-
0031010398
-
Covalent modification of the active site threonine of proteasomal? Subunits and the Escherichia coli homolog HslV by a new class of inhibitors
-
Bogyo, M. et al. Covalent modification of the active site threonine of proteasomal ? subunits and the Escherichia coli homolog HslV by a new class of inhibitors. Proc. Natl Acad. Sci. USA 94, 6629-6634 (1997).
-
(1997)
Proc. Natl Acad. Sci. USA
, vol.94
, pp. 6629-6634
-
-
Bogyo, M.1
-
20
-
-
84986883266
-
Cryo-EM reveals the conformation of a substrate analogue in the human 20S proteasome core
-
da Fonseca, P. C. A., Morris, E. P. Cryo-EM reveals the conformation of a substrate analogue in the human 20S proteasome core. Nature Commun. 6, 7573-7576 (2015).
-
(2015)
Nature Commun.
, vol.6
, pp. 7573-7576
-
-
Da Fonseca, P.C.A.1
Morris, E.P.2
-
21
-
-
84930188528
-
Crystal structure of the human 20S proteasome in complex with carfilzomib
-
Harshbarger, W., Miller, C., Diedrich, C., Sacchettini, J. Crystal structure of the human 20S proteasome in complex with carfilzomib. Structure 23, 418-424 (2015).
-
(2015)
Structure
, vol.23
, pp. 418-424
-
-
Harshbarger, W.1
Miller, C.2
Diedrich, C.3
Sacchettini, J.4
-
22
-
-
0037021405
-
Artemisinin: Mechanisms of action, resistance and toxicity
-
Meshnick, S. R. Artemisinin: mechanisms of action, resistance and toxicity. Int. J. Parasitol. 32, 1655-1660 (2002).
-
(2002)
Int. J. Parasitol.
, vol.32
, pp. 1655-1660
-
-
Meshnick, S.R.1
-
23
-
-
84904892931
-
Tracking Resistance to Artemisinin Collaboration (TRAC Spread of artemisinin resistance in Plasmodium falciparum malaria
-
Ashley, E. A. et al.; Tracking Resistance to Artemisinin Collaboration (TRAC). Spread of artemisinin resistance in Plasmodium falciparum malaria. N. Engl. J. Med. 371, 411-423 (2014).
-
(2014)
N. Engl. J. Med.
, vol.371
, pp. 411-423
-
-
Ashley, E.A.1
-
24
-
-
84921719133
-
Drug resistance K13-propeller mutations confer artemisinin resistance in Plasmodium falciparum clinical isolates
-
Straimer, J. et al. Drug resistance. K13-propeller mutations confer artemisinin resistance in Plasmodium falciparum clinical isolates. Science 347, 428-431 (2015).
-
(2015)
Science
, vol.347
, pp. 428-431
-
-
Straimer, J.1
-
25
-
-
84929493850
-
Targeting the cell stress response of Plasmodium falciparum to overcome artemisinin resistance
-
Dogovski, C. et al. Targeting the cell stress response of Plasmodium falciparum to overcome artemisinin resistance. PLoS Biol. 13, e1002132 (2015).
-
(2015)
PLoS Biol.
, vol.13
, pp. e1002132
-
-
Dogovski, C.1
-
26
-
-
73149103209
-
Selective inhibitor of proteasome's caspase-like sites sensitizes cells to specific inhibition of chymotrypsin-like sites
-
Britton, M. et al. Selective inhibitor of proteasome's caspase-like sites sensitizes cells to specific inhibition of chymotrypsin-like sites. Chem. Biol. 16, 1278-1289 (2009).
-
(2009)
Chem. Biol.
, vol.16
, pp. 1278-1289
-
-
Britton, M.1
-
27
-
-
77954314106
-
Assembly structure, and function of the 26S proteasome
-
Bedford, L., Paine, S., Sheppard, P. W., Mayer, R. J., Roelofs, J. Assembly, structure, and function of the 26S proteasome. Trends Cell Biol. 20, 391-401 (2010).
-
(2010)
Trends Cell Biol.
, vol.20
, pp. 391-401
-
-
Bedford, L.1
Paine, S.2
Sheppard, P.W.3
Mayer, R.J.4
Roelofs, J.5
-
28
-
-
0029099619
-
Vinyl sulfones as mechanism-based cysteine protease inhibitors
-
Palmer, J. T., Rasnick, D., Klaus, J. L., Brömme, D. Vinyl sulfones as mechanism-based cysteine protease inhibitors. J. Med. Chem. 38, 3193-3196 (1995).
-
(1995)
J. Med. Chem.
, vol.38
, pp. 3193-3196
-
-
Palmer, J.T.1
Rasnick, D.2
Klaus, J.L.3
Brömme, D.4
-
29
-
-
39349098031
-
Identification of proteases that regulate erythrocyte rupture by the malaria parasite Plasmodium falciparum
-
Arastu-Kapur, S. et al. Identification of proteases that regulate erythrocyte rupture by the malaria parasite Plasmodium falciparum. Nature Chem. Biol. 4, 203-213 (2008).
-
(2008)
Nature Chem. Biol.
, vol.4
, pp. 203-213
-
-
Arastu-Kapur, S.1
-
30
-
-
65649139708
-
Design and synthesis of an orally bioavailable and selective peptide epoxyketone proteasome inhibitor (PR-047
-
Zhou, H. J. et al. Design and synthesis of an orally bioavailable and selective peptide epoxyketone proteasome inhibitor (PR-047). J. Med. Chem. 52, 3028-3038 (2009).
-
(2009)
J. Med. Chem.
, vol.52
, pp. 3028-3038
-
-
Zhou, H.J.1
-
31
-
-
84922727036
-
Semi-automated selection of cryo-EM particles in RELION-1.3
-
Scheres, S. H. W. Semi-automated selection of cryo-EM particles in RELION-1.3. J. Struct. Biol. 189, 114-122 (2015).
-
(2015)
J. Struct. Biol.
, vol.189
, pp. 114-122
-
-
Scheres, S.H.W.1
-
32
-
-
0029975088
-
SPIDER and WEB: Processing and visualization of images in 3D electron microscopy and related fields
-
Frank, J. et al. SPIDER and WEB: processing and visualization of images in 3D electron microscopy and related fields. J. Struct. Biol. 116, 190-199 (1996).
-
(1996)
J. Struct. Biol.
, vol.116
, pp. 190-199
-
-
Frank, J.1
-
33
-
-
4444221565
-
UCSF Chimera - A visualization system for exploratory research and analysis
-
Pettersen, E. F. et al. UCSF Chimera-a visualization system for exploratory research and analysis. J. Comput. Chem. 25, 1605-1612 (2004).
-
(2004)
J. Comput. Chem.
, vol.25
, pp. 1605-1612
-
-
Pettersen, E.F.1
-
34
-
-
84894623755
-
Quantifying the local resolution of cryo-EM density maps
-
Kucukelbir, A., Sigworth, F. J., Tagare, H. D. Quantifying the local resolution of cryo-EM density maps. Nature Methods 11, 63-65 (2014).
-
(2014)
Nature Methods
, vol.11
, pp. 63-65
-
-
Kucukelbir, A.1
Sigworth, F.J.2
Tagare, H.D.3
-
35
-
-
84930074657
-
The Phyre2 web portal for protein modeling, prediction and analysis
-
Kelley, L. A., Mezulis, S., Yates, C. M., Wass, M. N., Sternberg, M. J. E. The Phyre2 web portal for protein modeling, prediction and analysis. Nature Protocols 10, 845-858 (2015).
-
(2015)
Nature Protocols
, vol.10
, pp. 845-858
-
-
Kelley, L.A.1
Mezulis, S.2
Yates, C.M.3
Wass, M.N.4
Sternberg, M.J.E.5
-
36
-
-
42949089487
-
Flexible fitting of atomic structures into electron microscopy maps using molecular dynamics
-
Trabuco, L. G., Villa, E., Mitra, K., Frank, J., Schulten, K. Flexible fitting of atomic structures into electron microscopy maps using molecular dynamics. Structure 16, 673-683 (2008).
-
(2008)
Structure
, vol.16
, pp. 673-683
-
-
Trabuco, L.G.1
Villa, E.2
Mitra, K.3
Frank, J.4
Schulten, K.5
-
37
-
-
77949535720
-
Features and development of Coot
-
Emsley, P., Lohkamp, B., Scott, W. G., Cowtan, K. Features and development of Coot. Acta Crystallogr. D 66, 486-501 (2010).
-
(2010)
Acta Crystallogr. D
, vol.66
, pp. 486-501
-
-
Emsley, P.1
Lohkamp, B.2
Scott, W.G.3
Cowtan, K.4
-
38
-
-
84860273177
-
Towards automated crystallographic structure refinement with phenix.refine
-
Afonine, P. V. et al. Towards automated crystallographic structure refinement with phenix.refine. Acta Crystallogr. D 68, 352-367 (2012).
-
(2012)
Acta Crystallogr. D
, vol.68
, pp. 352-367
-
-
Afonine, P.V.1
-
39
-
-
74549178560
-
MolProbity: All-atom structure validation for macromolecular crystallography
-
Chen, V. B. et al. MolProbity: all-atom structure validation for macromolecular crystallography. Acta Crystallogr. D 66, 12-21 (2010).
-
(2010)
Acta Crystallogr. D
, vol.66
, pp. 12-21
-
-
Chen, V.B.1
-
40
-
-
33750989899
-
A fluorescent broad-spectrum proteasome inhibitor for labeling proteasomes in vitro and in vivo
-
Verdoes, M. et al. A fluorescent broad-spectrum proteasome inhibitor for labeling proteasomes in vitro and in vivo. Chem. Biol. 13, 1217-1226 (2006).
-
(2006)
Chem. Biol.
, vol.13
, pp. 1217-1226
-
-
Verdoes, M.1
-
41
-
-
0142042865
-
Optimal determination of particle orientation, absolute hand, and contrast loss in single-particle electron cryomicroscopy
-
Rosenthal, P. B., Henderson, R. Optimal determination of particle orientation, absolute hand, and contrast loss in single-particle electron cryomicroscopy. J. Mol. Biol. 333, 721-745 (2003).
-
(2003)
J. Mol. Biol.
, vol.333
, pp. 721-745
-
-
Rosenthal, P.B.1
Henderson, R.2
|