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Volumn 7, Issue , 2016, Pages

Modelling the Tox21 10 K chemical profiles for in vivo toxicity prediction and mechanism characterization

Author keywords

[No Author keywords available]

Indexed keywords

CELL NUCLEUS RECEPTOR; ORGANIC COMPOUND;

EID: 84955449812     PISSN: None     EISSN: 20411723     Source Type: Journal    
DOI: 10.1038/ncomms10425     Document Type: Article
Times cited : (201)

References (38)
  • 1
    • 39349118236 scopus 로고    scopus 로고
    • Toxicology. Transforming environmental health protection
    • Collins, F. S., Gray, G. M., Bucher, J. R. Toxicology. Transforming environmental health protection. Science 319, 906-907 (2008).
    • (2008) Science , vol.319 , pp. 906-907
    • Collins, F.S.1    Gray, G.M.2    Bucher, J.R.3
  • 2
    • 62749084516 scopus 로고    scopus 로고
    • Toxicity testing in the 21st century: Implications for human health risk assessment
    • discussion 492-487
    • Kavlock, R. J., Austin, C. P., Tice, R. R. Toxicity testing in the 21st century: implications for human health risk assessment. Risk Anal. 29, 485-487 discussion 492-487 (2009).
    • (2009) Risk Anal. , vol.29 , pp. 485-487
    • Kavlock, R.J.1    Austin, C.P.2    Tice, R.R.3
  • 3
    • 84879599189 scopus 로고    scopus 로고
    • Improving the human hazard characterization of chemicals: A Tox21 update
    • Tice, R. R., Austin, C. P., Kavlock, R. J., Bucher, J. R. Improving the human hazard characterization of chemicals: a Tox21 update. Environ. Health Perspect. 121, 756-765 (2013).
    • (2013) Environ. Health Perspect. , vol.121 , pp. 756-765
    • Tice, R.R.1    Austin, C.P.2    Kavlock, R.J.3    Bucher, J.R.4
  • 5
    • 79961042769 scopus 로고    scopus 로고
    • Chemical genomics profiling of environmental chemical modulation of human nuclear receptors
    • Huang, R. et al. Chemical genomics profiling of environmental chemical modulation of human nuclear receptors. Environ. Health Perspect. 119, 1142-1148 (2011).
    • (2011) Environ. Health Perspect. , vol.119 , pp. 1142-1148
    • Huang, R.1
  • 6
    • 78649630186 scopus 로고    scopus 로고
    • The future of toxicity testing: A focus on in vitro methods using a quantitative high throughput screening platform
    • Shukla, S. J., Huang, R., Austin, C. P., Xia, M. The future of toxicity testing: a focus on in vitro methods using a quantitative high throughput screening platform. Drug Discov. Today 15, 997-1007 (2010).
    • (2010) Drug Discov. Today , vol.15 , pp. 997-1007
    • Shukla, S.J.1    Huang, R.2    Austin, C.P.3    Xia, M.4
  • 7
    • 84881124332 scopus 로고    scopus 로고
    • The Tox21 robotic platform for the assessment of environmental chemicals-from vision to reality
    • Attene-Ramos, M. S. et al. The Tox21 robotic platform for the assessment of environmental chemicals-from vision to reality. Drug Discov. Today 18, 716-723 (2013).
    • (2013) Drug Discov. Today , vol.18 , pp. 716-723
    • Attene-Ramos, M.S.1
  • 8
    • 84923337329 scopus 로고    scopus 로고
    • Quantitative high-throughput profiling of environmental chemicals and drugs that modulate farnesoid X receptor
    • Hsu, C. W. et al. Quantitative high-throughput profiling of environmental chemicals and drugs that modulate farnesoid X receptor. Sci. Rep 4, 6437 (2014).
    • (2014) Sci. Rep , vol.4 , pp. 6437
    • Hsu, C.W.1
  • 9
    • 84904350064 scopus 로고    scopus 로고
    • Profiling of the Tox21 10K compound library for agonists and antagonists of the estrogen receptor alpha signaling pathway
    • Huang, R. et al. Profiling of the Tox21 10K compound library for agonists and antagonists of the estrogen receptor alpha signaling pathway. Sci. Rep. 4, 5664 (2014).
    • (2014) Sci. Rep. , vol.4 , pp. 5664
    • Huang, R.1
  • 10
    • 84920090996 scopus 로고    scopus 로고
    • Profiling of the Tox21 chemical collection for mitochondrial function to identify compounds that acutely decrease mitochondrial membrane potential
    • Attene-Ramos, M. S. et al. Profiling of the Tox21 chemical collection for mitochondrial function to identify compounds that acutely decrease mitochondrial membrane potential. Environ. Health Perspect. 123, 49-56 (2015).
    • (2015) Environ. Health Perspect. , vol.123 , pp. 49-56
    • Attene-Ramos, M.S.1
  • 11
    • 0033003760 scopus 로고    scopus 로고
    • A simple statistical parameter for use in evaluation and validation of high throughput screening assays
    • Zhang, J. H., Chung, T. D., Oldenburg, K. R. A simple statistical parameter for use in evaluation and validation of high throughput screening assays. J. Biomol. Screen. 4, 67-73 (1999).
    • (1999) J. Biomol. Screen. , vol.4 , pp. 67-73
    • Zhang, J.H.1    Chung, T.D.2    Oldenburg, K.R.3
  • 12
    • 84882754000 scopus 로고    scopus 로고
    • From Na\+/K\+-ATPase and cardiac glycosides to cytotoxicity and cancer treatment
    • Babula, P., Masarik, M., Adam, V., Provaznik, I., Kizek, R. From Na\+/K\+-ATPase and cardiac glycosides to cytotoxicity and cancer treatment. Anticancer Agents Med. Chem. 13, 1069-1087 (2013).
    • (2013) Anticancer Agents Med. Chem. , vol.13 , pp. 1069-1087
    • Babula, P.1    Masarik, M.2    Adam, V.3    Provaznik, I.4    Kizek, R.5
  • 13
    • 79955400711 scopus 로고    scopus 로고
    • Statin-induced myopathy: A review and update
    • Abd, T. T., Jacobson, T. A. Statin-induced myopathy: a review and update. Expert Opin. Drug Saf. 10, 373-387 (2011).
    • (2011) Expert Opin. Drug Saf. , vol.10 , pp. 373-387
    • Abd, T.T.1    Jacobson, T.A.2
  • 14
    • 15344348695 scopus 로고    scopus 로고
    • The alkylating carcinogen N-methyl-N0-nitro-Nnitrosoguanidine activates the plasminogen activator inhibitor-1 gene through sequential phosphorylation of p53 by ATM and ATR kinases
    • Vidal, B. et al. The alkylating carcinogen N-methyl-N0-nitro-Nnitrosoguanidine activates the plasminogen activator inhibitor-1 gene through sequential phosphorylation of p53 by ATM and ATR kinases. Thromb. Haemost. 93, 584-591 (2005).
    • (2005) Thromb. Haemost. , vol.93 , pp. 584-591
    • Vidal, B.1
  • 15
    • 84868258039 scopus 로고    scopus 로고
    • Review: Endocrine disrupting chemicals and immune responses: A focus on bisphenol-A and its potential mechanisms
    • Rogers, J. A., Metz, L., Yong, V. W. Review: endocrine disrupting chemicals and immune responses: a focus on bisphenol-A and its potential mechanisms. Mol. Immunol. 53, 421-430 (2012).
    • (2012) Mol. Immunol. , vol.53 , pp. 421-430
    • Rogers, J.A.1    Metz, L.2    Yong, V.W.3
  • 16
    • 84907867579 scopus 로고    scopus 로고
    • Effect of nonpersistent pesticides on estrogen receptor, androgen receptor, and aryl hydrocarbon receptor
    • Medjakovic, S. et al. Effect of nonpersistent pesticides on estrogen receptor, androgen receptor, and aryl hydrocarbon receptor. Environ. Toxicol. 29, 1201-1216 (2013).
    • (2013) Environ. Toxicol. , vol.29 , pp. 1201-1216
    • Medjakovic, S.1
  • 18
    • 0027374862 scopus 로고
    • Ampiroxicam, an anti-inflammatory agent which is a prodrug of piroxicam
    • Carty, T. J. et al. Ampiroxicam, an anti-inflammatory agent which is a prodrug of piroxicam. Agents Actions 39, 157-165 (1993).
    • (1993) Agents Actions , vol.39 , pp. 157-165
    • Carty, T.J.1
  • 19
    • 84877297399 scopus 로고    scopus 로고
    • Perspectives on validation of high-throughput assays supporting 21st century toxicity testing
    • Judson, R. et al. Perspectives on validation of high-throughput assays supporting 21st century toxicity testing. ALTEX 30, 51-56 (2013).
    • (2013) ALTEX , vol.30 , pp. 51-56
    • Judson, R.1
  • 20
    • 41849099259 scopus 로고    scopus 로고
    • Characterization of diversity in toxicity mechanism using in vitro cytotoxicity assays in quantitative high throughput screening
    • Huang, R. et al. Characterization of diversity in toxicity mechanism using in vitro cytotoxicity assays in quantitative high throughput screening. Chem. Res. Toxicol. 21, 659-667 (2008).
    • (2008) Chem. Res. Toxicol. , vol.21 , pp. 659-667
    • Huang, R.1
  • 22
    • 84865650447 scopus 로고    scopus 로고
    • Can animal data predict human outcome? Problems and pitfalls of translational animal research
    • Martic-Kehl, M. I., Schibli, R., Schubiger, P. A. Can animal data predict human outcome? Problems and pitfalls of translational animal research. Eur. J. Nucl. Med. Mol. Imaging 39, 1492-1496 (2012).
    • (2012) Eur. J. Nucl. Med. Mol. Imaging , vol.39 , pp. 1492-1496
    • Martic-Kehl, M.I.1    Schibli, R.2    Schubiger, P.A.3
  • 23
    • 2642692496 scopus 로고
    • The MEIC program and its implications for the prediction of acute human systemic toxicity
    • Walum, E., Nilsson, M., Clemedson, C., Ekwall, B. The MEIC program and its implications for the prediction of acute human systemic toxicity. Alternative Methods Toxicol. Life Sci. 11, 275-282 (1995).
    • (1995) Alternative Methods Toxicol. Life Sci. , vol.11 , pp. 275-282
    • Walum, E.1    Nilsson, M.2    Clemedson, C.3    Ekwall, B.4
  • 24
    • 0024708337 scopus 로고
    • Alternatives to animals in toxicity testing
    • Goldberg, A. M., Frazier, J. M. Alternatives to animals in toxicity testing. Sci. Am. 261, 24-30 (1989).
    • (1989) Sci. Am. , vol.261 , pp. 24-30
    • Goldberg, A.M.1    Frazier, J.M.2
  • 25
    • 84903693496 scopus 로고    scopus 로고
    • Integrative approaches for predicting in vivo effects of chemicals from their structural descriptors and the results of short-term biological assays
    • Low, Y. S., Sedykh, A., Rusyn, I., Tropsha, A. Integrative approaches for predicting in vivo effects of chemicals from their structural descriptors and the results of short-term biological assays. Curr. Top. Med. Chem. 14, 1356-1364 (2014).
    • (2014) Curr. Top. Med. Chem. , vol.14 , pp. 1356-1364
    • Low, Y.S.1    Sedykh, A.2    Rusyn, I.3    Tropsha, A.4
  • 26
    • 84929478944 scopus 로고    scopus 로고
    • Population-based hazard and concentration-response assessment of chemicals: The 1000 Genomes High-Throughput Screening Study
    • Abdo, N. et al. Population-based hazard and concentration-response assessment of chemicals: The 1000 Genomes High-Throughput Screening Study. Environ. Health Perspect. 123, 458-466 (2015).
    • (2015) Environ. Health Perspect. , vol.123 , pp. 458-466
    • Abdo, N.1
  • 27
    • 84941076570 scopus 로고    scopus 로고
    • Prediction of human population responses to toxic compounds by a collaborative competition
    • Eduati, F. et al. Prediction of human population responses to toxic compounds by a collaborative competition. Nat. Biotechnol. 33, 933-940 (2015).
    • (2015) Nat. Biotechnol. , vol.33 , pp. 933-940
    • Eduati, F.1
  • 28
    • 79955428497 scopus 로고    scopus 로고
    • The NCGC pharmaceutical collection: A comprehensive resource of clinically approved drugs enabling repurposing and chemical genomics
    • Huang, R. et al. The NCGC pharmaceutical collection: a comprehensive resource of clinically approved drugs enabling repurposing and chemical genomics. Sci. Transl. Med. 3, 80-16 (2011).
    • (2011) Sci. Transl. Med. , vol.3 , pp. 80-116
    • Huang, R.1
  • 29
    • 84862900458 scopus 로고    scopus 로고
    • The development, application and limitations of breast cancer cell lines to study tamoxifen and aromatase inhibitor resistance
    • Wong, C., Chen, S. The development, application and limitations of breast cancer cell lines to study tamoxifen and aromatase inhibitor resistance. J. Steroid Biochem. Mol. Biol. 131, 83-92 (2012).
    • (2012) J. Steroid Biochem. Mol. Biol. , vol.131 , pp. 83-92
    • Wong, C.1    Chen, S.2
  • 30
    • 84943756669 scopus 로고    scopus 로고
    • Cell-based high-throughput screening for aromatase inhibitors in the Tox21 10 K library
    • Chen, S. et al. Cell-based high-throughput screening for aromatase inhibitors in the Tox21 10 K library. Toxicol. Sci. 147, 446-457 (2015).
    • (2015) Toxicol. Sci. , vol.147 , pp. 446-457
    • Chen, S.1
  • 31
    • 84862144439 scopus 로고    scopus 로고
    • Application of a homogenous membrane potential assay to assess mitochondrial function
    • Sakamuru, S. et al. Application of a homogenous membrane potential assay to assess mitochondrial function. Physiol. Genomics 44, 495-503 (2012).
    • (2012) Physiol. Genomics , vol.44 , pp. 495-503
    • Sakamuru, S.1
  • 32
    • 79960993856 scopus 로고    scopus 로고
    • Characterization of environmental chemicals with potential for DNA damage using isogenic DNA repair-deficient chicken DT40 cell lines
    • Yamamoto, K. N. et al. Characterization of environmental chemicals with potential for DNA damage using isogenic DNA repair-deficient chicken DT40 cell lines. Environ. Mol. Mutagen 52, 547-561 (2011).
    • (2011) Environ. Mol. Mutagen , vol.52 , pp. 547-561
    • Yamamoto, K.N.1
  • 33
    • 84859464647 scopus 로고    scopus 로고
    • High-throughput genotoxicity assay identifies antioxidants as inducers of DNA damage response and cell death
    • Fox, J. T. et al. High-throughput genotoxicity assay identifies antioxidants as inducers of DNA damage response and cell death. Proc. Natl Acad. Sci. USA 109, 5423-5428 (2012).
    • (2012) Proc. Natl Acad. Sci. USA , vol.109 , pp. 5423-5428
    • Fox, J.T.1
  • 34
    • 84864746527 scopus 로고    scopus 로고
    • Profiling environmental chemicals for activity in the antioxidant response element signaling pathway using a high throughput screening approach
    • Shukla, S. J. et al. Profiling environmental chemicals for activity in the antioxidant response element signaling pathway using a high throughput screening approach. Environ. Health Perspect. 120, 1150-1156 (2012).
    • (2012) Environ. Health Perspect. , vol.120 , pp. 1150-1156
    • Shukla, S.J.1
  • 35
    • 33746789921 scopus 로고    scopus 로고
    • Quantitative high-throughput screening: A titration-based approach that efficiently identifies biological activities in large chemical libraries
    • Inglese, J. et al. Quantitative high-throughput screening: a titration-based approach that efficiently identifies biological activities in large chemical libraries. Proc. Natl Acad. Sci. USA 103, 11473-11478 (2006).
    • (2006) Proc. Natl Acad. Sci. USA , vol.103 , pp. 11473-11478
    • Inglese, J.1
  • 37
    • 33746588228 scopus 로고    scopus 로고
    • Self-organizing neural projections
    • Kohonen, T. Self-organizing neural projections. Neural Netw. 19, 723-733 (2006).
    • (2006) Neural Netw. , vol.19 , pp. 723-733
    • Kohonen, T.1
  • 38
    • 0027457620 scopus 로고
    • Receiver-operating characteristic (ROC) plots: A fundamental evaluation tool in clinical medicine
    • Zweig, M. H., Campbell, G. Receiver-operating characteristic (ROC) plots: a fundamental evaluation tool in clinical medicine. Clin. Chem. 39, 561-577 (1993).
    • (1993) Clin. Chem. , vol.39 , pp. 561-577
    • Zweig, M.H.1    Campbell, G.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.