-
1
-
-
78751590899
-
Silencing chromatin: comparing modes and mechanisms
-
Beisel C., Paro R. Silencing chromatin: comparing modes and mechanisms. Nat Rev Genet 2011, 12:123-135.
-
(2011)
Nat Rev Genet
, vol.12
, pp. 123-135
-
-
Beisel, C.1
Paro, R.2
-
2
-
-
84885774880
-
Something silent this way forms: the functional organization of the repressive nuclear compartment
-
Politz J.C., Scalzo D., Groudine M. Something silent this way forms: the functional organization of the repressive nuclear compartment. Annu Rev Cell Dev Biol 2013, 29:241-270.
-
(2013)
Annu Rev Cell Dev Biol
, vol.29
, pp. 241-270
-
-
Politz, J.C.1
Scalzo, D.2
Groudine, M.3
-
3
-
-
84928741638
-
Constitutive heterochromatin formation and transcription in mammals
-
Saksouk N., Simboeck E., Déjardin J. Constitutive heterochromatin formation and transcription in mammals. Epigenet Chromatin 2015, 8:3.
-
(2015)
Epigenet Chromatin
, vol.8
, pp. 3
-
-
Saksouk, N.1
Simboeck, E.2
Déjardin, J.3
-
4
-
-
84938303550
-
Chromatin at the nuclear periphery and the regulation of genome functions
-
Lemaitre C., Bickmore W.A. Chromatin at the nuclear periphery and the regulation of genome functions. Histochem Cell Biol 2015, 144:111-122.
-
(2015)
Histochem Cell Biol
, vol.144
, pp. 111-122
-
-
Lemaitre, C.1
Bickmore, W.A.2
-
5
-
-
84897042327
-
Nucleolus and nuclear periphery: velcro for heterochromatin
-
Padeken J., Heun P. Nucleolus and nuclear periphery: velcro for heterochromatin. Curr Opin Cell Biol 2014, 28:54-60.
-
(2014)
Curr Opin Cell Biol
, vol.28
, pp. 54-60
-
-
Padeken, J.1
Heun, P.2
-
6
-
-
0034330420
-
Nuclear compartmentalization and gene activity
-
Francastel C., Schubeler D., Martin D.I., Groudine M. Nuclear compartmentalization and gene activity. Nat Rev Mol Cell Biol 2000, 1:137-143.
-
(2000)
Nat Rev Mol Cell Biol
, vol.1
, pp. 137-143
-
-
Francastel, C.1
Schubeler, D.2
Martin, D.I.3
Groudine, M.4
-
7
-
-
33646942698
-
Genome restructuring in mouse embryos during reprogramming and early development
-
Martin C., Beaujean N., Brochard V., Audouard C., Zink D., Debey P. Genome restructuring in mouse embryos during reprogramming and early development. Dev Biol 2006, 292:317-332.
-
(2006)
Dev Biol
, vol.292
, pp. 317-332
-
-
Martin, C.1
Beaujean, N.2
Brochard, V.3
Audouard, C.4
Zink, D.5
Debey, P.6
-
8
-
-
84884134904
-
The pluripotent genome in three dimensions is shaped around pluripotency factors
-
de Wit E., Bouwman B.A., Zhu Y., Klous P., Splinter E., Verstegen M.J., Krijger P.H., Festuccia N., Nora E.P., Welling M., et al. The pluripotent genome in three dimensions is shaped around pluripotency factors. Nature 2013, 501:227-231.
-
(2013)
Nature
, vol.501
, pp. 227-231
-
-
de Wit, E.1
Bouwman, B.A.2
Zhu, Y.3
Klous, P.4
Splinter, E.5
Verstegen, M.J.6
Krijger, P.H.7
Festuccia, N.8
Nora, E.P.9
Welling, M.10
-
9
-
-
84867671385
-
3D-FISH analysis of embryonic nuclei in mouse highlights several abrupt changes of nuclear organization during preimplantation development
-
Aguirre-Lavin T., Adenot P., Bonnet-Garnier A., Lehmann G., Fleurot R., Boulesteix C., Debey P., Beaujean N. 3D-FISH analysis of embryonic nuclei in mouse highlights several abrupt changes of nuclear organization during preimplantation development. BMC Dev Biol 2012, 12:30.
-
(2012)
BMC Dev Biol
, vol.12
, pp. 30
-
-
Aguirre-Lavin, T.1
Adenot, P.2
Bonnet-Garnier, A.3
Lehmann, G.4
Fleurot, R.5
Boulesteix, C.6
Debey, P.7
Beaujean, N.8
-
10
-
-
84922008989
-
Chromatin regulation: how complex does it get?
-
Meier K., Brehm A. Chromatin regulation: how complex does it get?. Epigenetics 2014, 9:1485-1495.
-
(2014)
Epigenetics
, vol.9
, pp. 1485-1495
-
-
Meier, K.1
Brehm, A.2
-
11
-
-
63449109369
-
Heterochromatic genome stability requires regulators of histone H3 K9 methylation
-
Peng J.C., Karpen G.H. Heterochromatic genome stability requires regulators of histone H3 K9 methylation. PLoS Genet 2009, 5:e1000435.
-
(2009)
PLoS Genet
, vol.5
, pp. e1000435
-
-
Peng, J.C.1
Karpen, G.H.2
-
12
-
-
84865687580
-
Step-wise methylation of histone H3K9 positions heterochromatin at the nuclear periphery
-
Towbin B.D., Gonzalez-Aguilera C., Sack R., Gaidatzis D., Kalck V., Meister P., Askjaer P., Gasser S.M. Step-wise methylation of histone H3K9 positions heterochromatin at the nuclear periphery. Cell 2012, 150:934-947.
-
(2012)
Cell
, vol.150
, pp. 934-947
-
-
Towbin, B.D.1
Gonzalez-Aguilera, C.2
Sack, R.3
Gaidatzis, D.4
Kalck, V.5
Meister, P.6
Askjaer, P.7
Gasser, S.M.8
-
13
-
-
84892429004
-
Chromatin structure and transposable elements in organismal aging
-
Wood J.G., Helfand S.L. Chromatin structure and transposable elements in organismal aging. Front Genet 2013, 4:274.
-
(2013)
Front Genet
, vol.4
, pp. 274
-
-
Wood, J.G.1
Helfand, S.L.2
-
14
-
-
84878864199
-
The hallmarks of aging
-
Lopez-Otin C., Blasco M.A., Partridge L., Serrano M., Kroemer G. The hallmarks of aging. Cell 2013, 153:1194-1217.
-
(2013)
Cell
, vol.153
, pp. 1194-1217
-
-
Lopez-Otin, C.1
Blasco, M.A.2
Partridge, L.3
Serrano, M.4
Kroemer, G.5
-
15
-
-
84969301632
-
DNA methylation changes in aging human CD34+ cells coincide with hotspots of disordered methylation in AML at imprinted and allelically methylated regions
-
Triche T., Capone B.S., Merchant M.D., Chaudhary P., Ramsingh G. DNA methylation changes in aging human CD34+ cells coincide with hotspots of disordered methylation in AML at imprinted and allelically methylated regions. Blood 2013, 122:1193.
-
(2013)
Blood
, vol.122
, pp. 1193
-
-
Triche, T.1
Capone, B.S.2
Merchant, M.D.3
Chaudhary, P.4
Ramsingh, G.5
-
16
-
-
84939207207
-
Estrogen-induced chromatin decondensation and nuclear re-organization linked to regional epigenetic regulation in breast cancer
-
Rafique S., Thomas J.S., Sproul D., Bickmore W.A. Estrogen-induced chromatin decondensation and nuclear re-organization linked to regional epigenetic regulation in breast cancer. Genome Biol 2015, 16:145.
-
(2015)
Genome Biol
, vol.16
, pp. 145
-
-
Rafique, S.1
Thomas, J.S.2
Sproul, D.3
Bickmore, W.A.4
-
17
-
-
84858412556
-
Silencing of endogenous retroviruses: when and why do histone marks predominate?
-
Leung D.C., Lorincz M.C. Silencing of endogenous retroviruses: when and why do histone marks predominate?. Trends Biochem Sci 2012, 37:127-133.
-
(2012)
Trends Biochem Sci
, vol.37
, pp. 127-133
-
-
Leung, D.C.1
Lorincz, M.C.2
-
18
-
-
84905900534
-
Extensive transduction of nonrepetitive DNA mediated by L1 retrotransposition in cancer genomes
-
Tubio J.M.C., Li Y., Ju Y.S., Martincorena I., Cooke S.L., Tojo M., Gundem G., Pipinikas C.P., Zamora J., Raine K., et al. Extensive transduction of nonrepetitive DNA mediated by L1 retrotransposition in cancer genomes. Science 2014, 345:1251343.
-
(2014)
Science
, vol.345
, pp. 1251343
-
-
Tubio, J.M.C.1
Li, Y.2
Ju, Y.S.3
Martincorena, I.4
Cooke, S.L.5
Tojo, M.6
Gundem, G.7
Pipinikas, C.P.8
Zamora, J.9
Raine, K.10
-
19
-
-
62849115107
-
Repeated elements coordinate the spatial organization of the yeast genome
-
O'Sullivan J.M., Sontam D.M., Grierson R., Jones B. Repeated elements coordinate the spatial organization of the yeast genome. Yeast 2009, 26:125-138.
-
(2009)
Yeast
, vol.26
, pp. 125-138
-
-
O'Sullivan, J.M.1
Sontam, D.M.2
Grierson, R.3
Jones, B.4
-
20
-
-
33845866637
-
H3K9 methylation and RNA interference regulate nucleolar organization and repeated DNA stability
-
Peng J.C., Karpen G.H. H3K9 methylation and RNA interference regulate nucleolar organization and repeated DNA stability. Nat Cell Biol 2007, 9:25-35.
-
(2007)
Nat Cell Biol
, vol.9
, pp. 25-35
-
-
Peng, J.C.1
Karpen, G.H.2
-
22
-
-
84903782130
-
Evolutionally dynamic L1 regulation in embryonic stem cells
-
Castro-Diaz N., Ecco G., Coluccio A., Kapopoulou A., Yazdanpanah B., Friedli M., Duc J., Jang S.M., Turelli P., Trono D. Evolutionally dynamic L1 regulation in embryonic stem cells. Gene Dev 2014, 28:1397-1409.
-
(2014)
Gene Dev
, vol.28
, pp. 1397-1409
-
-
Castro-Diaz, N.1
Ecco, G.2
Coluccio, A.3
Kapopoulou, A.4
Yazdanpanah, B.5
Friedli, M.6
Duc, J.7
Jang, S.M.8
Turelli, P.9
Trono, D.10
-
23
-
-
84903791369
-
PiRNA pathway targets active LINE1 elements to establish the repressive H3K9me3 mark in germ cells
-
Pezic D., Manakov S.A., Sachidanandam R., Aravin A.A. piRNA pathway targets active LINE1 elements to establish the repressive H3K9me3 mark in germ cells. Gene Dev 2014, 28:1410-1428.
-
(2014)
Gene Dev
, vol.28
, pp. 1410-1428
-
-
Pezic, D.1
Manakov, S.A.2
Sachidanandam, R.3
Aravin, A.A.4
-
24
-
-
84930939091
-
Histone H3.3 is required for endogenous retroviral element silencing in embryonic stem cells
-
Elsasser S.J., Noh K.-M., Diaz N., Allis C.D., Banaszynski L.A. Histone H3.3 is required for endogenous retroviral element silencing in embryonic stem cells. Nature 2015, 522:240-244.
-
(2015)
Nature
, vol.522
, pp. 240-244
-
-
Elsasser, S.J.1
Noh, K.-M.2
Diaz, N.3
Allis, C.D.4
Banaszynski, L.A.5
-
25
-
-
84940990521
-
Early embryonic-like cells are induced by downregulating replication-dependent chromatin assembly
-
Ishiuchi T., Enriquez-Gasca R., Mizutani E., Boskovic A., Ziegler-Birling C., Rodriguez-Terrones D., Wakayama T., Vaquerizas J.M., Torres-Padilla M.E. Early embryonic-like cells are induced by downregulating replication-dependent chromatin assembly. Nat Struct Mol Biol 2015, 22:662-671.
-
(2015)
Nat Struct Mol Biol
, vol.22
, pp. 662-671
-
-
Ishiuchi, T.1
Enriquez-Gasca, R.2
Mizutani, E.3
Boskovic, A.4
Ziegler-Birling, C.5
Rodriguez-Terrones, D.6
Wakayama, T.7
Vaquerizas, J.M.8
Torres-Padilla, M.E.9
-
26
-
-
84945472619
-
Systematic identification of factors for provirus silencing in embryonic stem cells
-
Yang B.X., El Farran C.A., Guo H.C., Yu T., Fang H.T., Wang H.F., Schlesinger S., Seah Y.F., Goh G.Y., Neo S.P., et al. Systematic identification of factors for provirus silencing in embryonic stem cells. Cell 2015, 163:230-245.
-
(2015)
Cell
, vol.163
, pp. 230-245
-
-
Yang, B.X.1
El Farran, C.A.2
Guo, H.C.3
Yu, T.4
Fang, H.T.5
Wang, H.F.6
Schlesinger, S.7
Seah, Y.F.8
Goh, G.Y.9
Neo, S.P.10
-
27
-
-
84898010302
-
The retrovirus HERVH is a long noncoding RNA required for human embryonic stem cell identity
-
Lu X., Sachs F., Ramsay L., Jacques P.E., Goke J., Bourque G., Ng H.H. The retrovirus HERVH is a long noncoding RNA required for human embryonic stem cell identity. Nat Struct Mol Biol 2014, 21:423-425.
-
(2014)
Nat Struct Mol Biol
, vol.21
, pp. 423-425
-
-
Lu, X.1
Sachs, F.2
Ramsay, L.3
Jacques, P.E.4
Goke, J.5
Bourque, G.6
Ng, H.H.7
-
28
-
-
84922115236
-
Primate-specific endogenous retrovirus-driven transcription defines naive-like stem cells
-
Wang J., Xie G., Singh M., Ghanbarian A.T., Rasko T., Szvetnik A., Cai H., Besser D., Prigione A., Fuchs N.V., et al. Primate-specific endogenous retrovirus-driven transcription defines naive-like stem cells. Nature 2014, 516:405-409.
-
(2014)
Nature
, vol.516
, pp. 405-409
-
-
Wang, J.1
Xie, G.2
Singh, M.3
Ghanbarian, A.T.4
Rasko, T.5
Szvetnik, A.6
Cai, H.7
Besser, D.8
Prigione, A.9
Fuchs, N.V.10
-
29
-
-
84901192884
-
Quiescence-induced LncRNAs trigger H4K20 trimethylation and transcriptional silencing
-
Bierhoff H., Dammert M.A., Brocks D., Dambacher S., Schotta G., Grummt I. Quiescence-induced LncRNAs trigger H4K20 trimethylation and transcriptional silencing. Mol Cell 2014, 54:675-682.
-
(2014)
Mol Cell
, vol.54
, pp. 675-682
-
-
Bierhoff, H.1
Dammert, M.A.2
Brocks, D.3
Dambacher, S.4
Schotta, G.5
Grummt, I.6
-
30
-
-
84903771634
-
Heterochromatin-associated interactions of Drosophila HP1a with dADD1, HIPP1, and repetitive RNAs
-
Alekseyenko A.A., Gorchakov A.A., Zee B.M., Fuchs S.M., Kharchenko P.V., Kuroda M.I. Heterochromatin-associated interactions of Drosophila HP1a with dADD1, HIPP1, and repetitive RNAs. Gene Dev 2014, 28:1445-1460.
-
(2014)
Gene Dev
, vol.28
, pp. 1445-1460
-
-
Alekseyenko, A.A.1
Gorchakov, A.A.2
Zee, B.M.3
Fuchs, S.M.4
Kharchenko, P.V.5
Kuroda, M.I.6
-
31
-
-
84875263916
-
Epigenetic control of RNA polymerase I transcription in mammalian cells
-
Grummt I., Längst G. Epigenetic control of RNA polymerase I transcription in mammalian cells. BBA-Gene Regul Mech 2013, 1829:393-404.
-
(2013)
BBA-Gene Regul Mech
, vol.1829
, pp. 393-404
-
-
Grummt, I.1
Längst, G.2
-
32
-
-
77954954525
-
The NoRC complex mediates the heterochromatin formation and stability of silent rRNA genes and centromeric repeats
-
Guetg C., Lienemann P., Sirri V., Grummt I., Hernandez-Verdun D., Hottiger M.O., Fussenegger M., Santoro R. The NoRC complex mediates the heterochromatin formation and stability of silent rRNA genes and centromeric repeats. EMBO J 2010, 29:2135-2146.
-
(2010)
EMBO J
, vol.29
, pp. 2135-2146
-
-
Guetg, C.1
Lienemann, P.2
Sirri, V.3
Grummt, I.4
Hernandez-Verdun, D.5
Hottiger, M.O.6
Fussenegger, M.7
Santoro, R.8
-
33
-
-
84919432607
-
LncRNA maturation to initiate heterochromatin formation in the nucleolus is required for exit from pluripotency in ESCs
-
Savic N., Bar D., Leone S., Frommel S.C., Weber F.A., Vollenweider E., Ferrari E., Ziegler U., Kaech A., Shakhova O., et al. lncRNA maturation to initiate heterochromatin formation in the nucleolus is required for exit from pluripotency in ESCs. Cell Stem Cell 2014, 15:720-734.
-
(2014)
Cell Stem Cell
, vol.15
, pp. 720-734
-
-
Savic, N.1
Bar, D.2
Leone, S.3
Frommel, S.C.4
Weber, F.A.5
Vollenweider, E.6
Ferrari, E.7
Ziegler, U.8
Kaech, A.9
Shakhova, O.10
-
34
-
-
77958576363
-
Interaction of noncoding RNA with the rDNA promoter mediates recruitment of DNMT3b and silencing of rRNA genes
-
Schmitz K.-M., Mayer C., Postepska A., Grummt I. Interaction of noncoding RNA with the rDNA promoter mediates recruitment of DNMT3b and silencing of rRNA genes. Gene Dev 2010, 24:2264-2269.
-
(2010)
Gene Dev
, vol.24
, pp. 2264-2269
-
-
Schmitz, K.-M.1
Mayer, C.2
Postepska, A.3
Grummt, I.4
-
35
-
-
70449555139
-
Ribosomal DNA contributes to global chromatin regulation
-
Paredes S., Maggert K.A. Ribosomal DNA contributes to global chromatin regulation. Proc Natl Acad Sci U S A 2009, 106:17829-17834.
-
(2009)
Proc Natl Acad Sci U S A
, vol.106
, pp. 17829-17834
-
-
Paredes, S.1
Maggert, K.A.2
-
36
-
-
84939991605
-
Proteomic characterization of the nucleolar linker histone H1 interaction network
-
Szerlong H.J., Herman J.A., Krause C.M., DeLuca J.G., Skoultchi A., Winger Q.A., Prenni J.E., Hansen J.C. Proteomic characterization of the nucleolar linker histone H1 interaction network. J Mol Biol 2015, 427:2056-2071.
-
(2015)
J Mol Biol
, vol.427
, pp. 2056-2071
-
-
Szerlong, H.J.1
Herman, J.A.2
Krause, C.M.3
DeLuca, J.G.4
Skoultchi, A.5
Winger, Q.A.6
Prenni, J.E.7
Hansen, J.C.8
-
37
-
-
84919444537
-
The nucleolus gets the silent treatment
-
Feinberg A.P. The nucleolus gets the silent treatment. Cell Stem Cell 2014, 15:675-676.
-
(2014)
Cell Stem Cell
, vol.15
, pp. 675-676
-
-
Feinberg, A.P.1
-
38
-
-
84881593275
-
The nucleolus: a raft adrift in the nuclear sea or the keystone in nuclear structure?
-
O'Sullivan J.M., Pai D.A., Cridge A.G., Engelke D.R., Ganley A.R. The nucleolus: a raft adrift in the nuclear sea or the keystone in nuclear structure?. Biomol Concepts 2013, 4:277-286.
-
(2013)
Biomol Concepts
, vol.4
, pp. 277-286
-
-
O'Sullivan, J.M.1
Pai, D.A.2
Cridge, A.G.3
Engelke, D.R.4
Ganley, A.R.5
-
39
-
-
84975704717
-
Grabbing the genome by the NADs
-
Matheson T.D., Kaufman P.D. Grabbing the genome by the NADs. Chromosoma 2015, 10.1007/s00412-015-0527-8.
-
(2015)
Chromosoma
-
-
Matheson, T.D.1
Kaufman, P.D.2
-
40
-
-
84887584974
-
Heterochromatin establishment at pericentromeres depends on nuclear position
-
Jachowicz J.W., Santenard A., Bender A., Muller J., Torres-Padilla M.E. Heterochromatin establishment at pericentromeres depends on nuclear position. Genes Dev 2013, 27:2427-2432.
-
(2013)
Genes Dev
, vol.27
, pp. 2427-2432
-
-
Jachowicz, J.W.1
Santenard, A.2
Bender, A.3
Muller, J.4
Torres-Padilla, M.E.5
-
41
-
-
84907333075
-
Nucleolus-tethering system (NoTS) reveals that assembly of photobodies follows a self-organization model
-
Liu Y., Liu Q., Yan Q., Shi L., Fang Y. Nucleolus-tethering system (NoTS) reveals that assembly of photobodies follows a self-organization model. Mol Biol Cell 2014, 25:1366-1373.
-
(2014)
Mol Biol Cell
, vol.25
, pp. 1366-1373
-
-
Liu, Y.1
Liu, Q.2
Yan, Q.3
Shi, L.4
Fang, Y.5
-
43
-
-
84924804206
-
Inverse size scaling of the nucleolus by a concentration-dependent phase transition
-
Weber S.C., Brangwynne C.P. Inverse size scaling of the nucleolus by a concentration-dependent phase transition. Curr Biol 2015, 25:641-646.
-
(2015)
Curr Biol
, vol.25
, pp. 641-646
-
-
Weber, S.C.1
Brangwynne, C.P.2
-
44
-
-
84946771792
-
Forces, fluctuations and self-organization in the nucleus
-
Pederson T., King M., Markoc J.F. Forces, fluctuations and self-organization in the nucleus. Mol Biol Cell 2015, 26:3915-3919.
-
(2015)
Mol Biol Cell
, vol.26
, pp. 3915-3919
-
-
Pederson, T.1
King, M.2
Markoc, J.F.3
-
45
-
-
84876838711
-
The hierarchy of the 3D genome
-
Gibcus J.H., Dekker J. The hierarchy of the 3D genome. Mol Cell 2013, 49:773-782.
-
(2013)
Mol Cell
, vol.49
, pp. 773-782
-
-
Gibcus, J.H.1
Dekker, J.2
-
46
-
-
77955723803
-
Anomalous diffusion in the interphase cell nucleus: the effect of spatial correlations of chromatin
-
Fritsch C.C., Langowski J. Anomalous diffusion in the interphase cell nucleus: the effect of spatial correlations of chromatin. J Chem Phys 2010, 133:11.
-
(2010)
J Chem Phys
, vol.133
, pp. 11
-
-
Fritsch, C.C.1
Langowski, J.2
-
47
-
-
72449204595
-
Molecular crowding affects diffusion and binding of nuclear proteins in heterochromatin and reveals the fractal organization of chromatin
-
Bancaud A., Huet S., Daigle N., Mozziconacci J., Beaudouin J., Ellenberg J. Molecular crowding affects diffusion and binding of nuclear proteins in heterochromatin and reveals the fractal organization of chromatin. EMBO J 2009, 28:3785-3798.
-
(2009)
EMBO J
, vol.28
, pp. 3785-3798
-
-
Bancaud, A.1
Huet, S.2
Daigle, N.3
Mozziconacci, J.4
Beaudouin, J.5
Ellenberg, J.6
-
48
-
-
74949142827
-
The effects of osmotic stress on the structure and function of the cell nucleus
-
Finan J.D., Guilak F. The effects of osmotic stress on the structure and function of the cell nucleus. J Cell Biochem 2010, 109:460-467.
-
(2010)
J Cell Biochem
, vol.109
, pp. 460-467
-
-
Finan, J.D.1
Guilak, F.2
-
49
-
-
84863540362
-
Physical tethering and volume exclusion determine higher-order genome organization in budding yeast
-
Tjong H., Gong K., Chen L., Alber F. Physical tethering and volume exclusion determine higher-order genome organization in budding yeast. Genome Res 2012, 22:1295-1305.
-
(2012)
Genome Res
, vol.22
, pp. 1295-1305
-
-
Tjong, H.1
Gong, K.2
Chen, L.3
Alber, F.4
-
50
-
-
84877795624
-
Identical cells with different 3D genomes; cause and consequences?
-
Krijger P.H., de Laat W. Identical cells with different 3D genomes; cause and consequences?. Curr Opin Genet Dev 2013, 23:191-196.
-
(2013)
Curr Opin Genet Dev
, vol.23
, pp. 191-196
-
-
Krijger, P.H.1
de Laat, W.2
-
51
-
-
0014734592
-
Comparison of mitotic phenomena and effects induced by hypertonic solutions in HeLa cells
-
Robbins E., Pederson T., Klein P. Comparison of mitotic phenomena and effects induced by hypertonic solutions in HeLa cells. J Cell Biol 1970, 44:400-416.
-
(1970)
J Cell Biol
, vol.44
, pp. 400-416
-
-
Robbins, E.1
Pederson, T.2
Klein, P.3
-
52
-
-
84934437931
-
Correlative microscopy of individual cells: sequential application of microscopic systems with increasing resolution to study the nuclear landscape
-
Hubner B., Cremer T., Neumann J. Correlative microscopy of individual cells: sequential application of microscopic systems with increasing resolution to study the nuclear landscape. Methods Mol Biol 2013, 1042:299-336.
-
(2013)
Methods Mol Biol
, vol.1042
, pp. 299-336
-
-
Hubner, B.1
Cremer, T.2
Neumann, J.3
-
53
-
-
84888065325
-
Crowded chromatin is not sufficient for heterochromatin formation and not required for its maintenance
-
Walter A., Chapuis C., Huet S., Ellenberg J. Crowded chromatin is not sufficient for heterochromatin formation and not required for its maintenance. J Struct Biol 2013, 184:445-453.
-
(2013)
J Struct Biol
, vol.184
, pp. 445-453
-
-
Walter, A.1
Chapuis, C.2
Huet, S.3
Ellenberg, J.4
-
54
-
-
84901470319
-
Mechanisms of functional promiscuity by HP1 proteins
-
Canzio D., Larson A., Narlikar G.J. Mechanisms of functional promiscuity by HP1 proteins. Trends Cell Biol 2014, 24:377-386.
-
(2014)
Trends Cell Biol
, vol.24
, pp. 377-386
-
-
Canzio, D.1
Larson, A.2
Narlikar, G.J.3
-
55
-
-
84930719986
-
Lamins: nuclear intermediate filament proteins with fundamental functions in nuclear mechanics and genome regulation
-
Gruenbaum Y., Foisner R. Lamins: nuclear intermediate filament proteins with fundamental functions in nuclear mechanics and genome regulation. Annu Rev Biochem 2015, 84:131-164.
-
(2015)
Annu Rev Biochem
, vol.84
, pp. 131-164
-
-
Gruenbaum, Y.1
Foisner, R.2
-
56
-
-
84897036591
-
Mechanisms and dynamics of nuclear lamina-genome interactions
-
Amendola M., van Steensel B. Mechanisms and dynamics of nuclear lamina-genome interactions. Curr Opin Cell Biol 2014, 28:61-68.
-
(2014)
Curr Opin Cell Biol
, vol.28
, pp. 61-68
-
-
Amendola, M.1
van Steensel, B.2
-
57
-
-
84455208122
-
Mouse B-type lamins are required for proper organogenesis but not by embryonic stem cells
-
Kim Y., Sharov A.A., McDole K., Cheng M., Hao H., Fan C.-M., Gaiano N., Ko M.S.H., Zheng Y. Mouse B-type lamins are required for proper organogenesis but not by embryonic stem cells. Science 2011, 334:1706-1710.
-
(2011)
Science
, vol.334
, pp. 1706-1710
-
-
Kim, Y.1
Sharov, A.A.2
McDole, K.3
Cheng, M.4
Hao, H.5
Fan, C.-M.6
Gaiano, N.7
Ko, M.S.H.8
Zheng, Y.9
-
58
-
-
84928884605
-
Nuclear lamins are not required for lamina-associated domain organization in mouse embryonic stem cells
-
Amendola M., van Steensel B. Nuclear lamins are not required for lamina-associated domain organization in mouse embryonic stem cells. EMBO Rep 2015, 16:610-617.
-
(2015)
EMBO Rep
, vol.16
, pp. 610-617
-
-
Amendola, M.1
van Steensel, B.2
-
59
-
-
84882642434
-
Redistribution of the lamin B1 genomic binding profile affects rearrangement of heterochromatic domains and SAHF formation during senescence
-
Sadaie M., Salama R., Carroll T., Tomimatsu K., Chandra T., Young A.R., Narita M., Perez-Mancera P.A., Bennett D.C., Chong H., et al. Redistribution of the lamin B1 genomic binding profile affects rearrangement of heterochromatic domains and SAHF formation during senescence. Gene Dev 2013, 27:1800-1808.
-
(2013)
Gene Dev
, vol.27
, pp. 1800-1808
-
-
Sadaie, M.1
Salama, R.2
Carroll, T.3
Tomimatsu, K.4
Chandra, T.5
Young, A.R.6
Narita, M.7
Perez-Mancera, P.A.8
Bennett, D.C.9
Chong, H.10
-
60
-
-
84882682843
-
Lamin B1 depletion in senescent cells triggers large-scale changes in gene expression and the chromatin landscape
-
Shah P.P., Donahue G., Otte G.L., Capell B.C., Nelson D.M., Cao K., Aggarwala V., Cruickshanks H.A., Rai T.S., McBryan T., et al. Lamin B1 depletion in senescent cells triggers large-scale changes in gene expression and the chromatin landscape. Gene Dev 2013, 27:1787-1799.
-
(2013)
Gene Dev
, vol.27
, pp. 1787-1799
-
-
Shah, P.P.1
Donahue, G.2
Otte, G.L.3
Capell, B.C.4
Nelson, D.M.5
Cao, K.6
Aggarwala, V.7
Cruickshanks, H.A.8
Rai, T.S.9
McBryan, T.10
-
61
-
-
84873302358
-
LBR and lamin A/C sequentially tether peripheral heterochromatin and inversely regulate differentiation
-
Solovei I., Wang Audrey S., Thanisch K., Schmidt Christine S., Krebs S., Zwerger M., Cohen Tatiana V., Devys D., Foisner R., Peichl L., et al. LBR and lamin A/C sequentially tether peripheral heterochromatin and inversely regulate differentiation. Cell 2013, 152:584-598.
-
(2013)
Cell
, vol.152
, pp. 584-598
-
-
Solovei, I.1
Wang Audrey, S.2
Thanisch, K.3
Schmidt Christine, S.4
Krebs, S.5
Zwerger, M.6
Cohen Tatiana, V.7
Devys, D.8
Foisner, R.9
Peichl, L.10
-
62
-
-
84899815048
-
Stochastic genome-nuclear lamina interactions: modulating roles of lamin A and BAF
-
Kind J., van Steensel B. Stochastic genome-nuclear lamina interactions: modulating roles of lamin A and BAF. Nucleus 2014, 5:124-130.
-
(2014)
Nucleus
, vol.5
, pp. 124-130
-
-
Kind, J.1
van Steensel, B.2
-
63
-
-
26444589253
-
The nuclear-envelope protein and transcriptional repressor LAP2beta interacts with HDAC3 at the nuclear periphery, and induces histone H4 deacetylation
-
Somech R., Shaklai S., Geller O., Amariglio N., Simon A.J., Rechavi G., Gal-Yam E.N. The nuclear-envelope protein and transcriptional repressor LAP2beta interacts with HDAC3 at the nuclear periphery, and induces histone H4 deacetylation. J Cell Sci 2005, 118:4017-4025.
-
(2005)
J Cell Sci
, vol.118
, pp. 4017-4025
-
-
Somech, R.1
Shaklai, S.2
Geller, O.3
Amariglio, N.4
Simon, A.J.5
Rechavi, G.6
Gal-Yam, E.N.7
-
64
-
-
12344305602
-
LAP2alpha and BAF transiently localize to telomeres and specific regions on chromatin during nuclear assembly
-
Dechat T., Gajewski A., Korbei B., Gerlich D., Daigle N., Haraguchi T., Furukawa K., Ellenberg J., Foisner R. LAP2alpha and BAF transiently localize to telomeres and specific regions on chromatin during nuclear assembly. J Cell Sci 2004, 117:6117-6128.
-
(2004)
J Cell Sci
, vol.117
, pp. 6117-6128
-
-
Dechat, T.1
Gajewski, A.2
Korbei, B.3
Gerlich, D.4
Daigle, N.5
Haraguchi, T.6
Furukawa, K.7
Ellenberg, J.8
Foisner, R.9
-
65
-
-
84876879922
-
The nucleoplasmin homolog NLP mediates centromere clustering and anchoring to the nucleolus
-
Padeken J., Mendiburo M.J., Chlamydas S., Schwarz H.J., Kremmer E., Heun P. The nucleoplasmin homolog NLP mediates centromere clustering and anchoring to the nucleolus. Mol Cell 2013, 50:236-249.
-
(2013)
Mol Cell
, vol.50
, pp. 236-249
-
-
Padeken, J.1
Mendiburo, M.J.2
Chlamydas, S.3
Schwarz, H.J.4
Kremmer, E.5
Heun, P.6
-
66
-
-
0842310349
-
CTCF tethers an insulator to subnuclear sites, suggesting shared insulator mechanisms across species
-
Yusufzai T.M., Tagami H., Nakatani Y., Felsenfeld G. CTCF tethers an insulator to subnuclear sites, suggesting shared insulator mechanisms across species. Mol Cell 2004, 13:291-298.
-
(2004)
Mol Cell
, vol.13
, pp. 291-298
-
-
Yusufzai, T.M.1
Tagami, H.2
Nakatani, Y.3
Felsenfeld, G.4
-
67
-
-
84893767092
-
Topological organization of multichromosomal regions by the long intergenic noncoding RNA Firre
-
Hacisuleyman E., Goff L.A., Trapnell C., Williams A., Henao-Mejia J., Sun L., McClanahan P., Hendrickson D.G., Sauvageau M., Kelley D.R., et al. Topological organization of multichromosomal regions by the long intergenic noncoding RNA Firre. Nat Struct Mol Biol 2014, 21:198-206.
-
(2014)
Nat Struct Mol Biol
, vol.21
, pp. 198-206
-
-
Hacisuleyman, E.1
Goff, L.A.2
Trapnell, C.3
Williams, A.4
Henao-Mejia, J.5
Sun, L.6
McClanahan, P.7
Hendrickson, D.G.8
Sauvageau, M.9
Kelley, D.R.10
-
68
-
-
84938412430
-
The lncRNA Firre anchors the inactive X chromosome to the nucleolus by binding CTCF and maintains H3K27me3 methylation
-
Yang F., Deng X., Ma W., Berletch J.B., Rabaia N., Wei G., Moore J.M., Filippova G.N., Xu J., Liu Y., et al. The lncRNA Firre anchors the inactive X chromosome to the nucleolus by binding CTCF and maintains H3K27me3 methylation. Genome Biol 2015, 16:52.
-
(2015)
Genome Biol
, vol.16
, pp. 52
-
-
Yang, F.1
Deng, X.2
Ma, W.3
Berletch, J.B.4
Rabaia, N.5
Wei, G.6
Moore, J.M.7
Filippova, G.N.8
Xu, J.9
Liu, Y.10
-
69
-
-
84875703872
-
Single-cell dynamics of genome-nuclear lamina interactions
-
Kind J., Pagie L., Ortabozkoyun H., Boyle S., de Vries S.S., Janssen H., Amendola M., Nolen L.D., Bickmore W.A., van Steensel B. Single-cell dynamics of genome-nuclear lamina interactions. Cell 2013, 153:178-192.
-
(2013)
Cell
, vol.153
, pp. 178-192
-
-
Kind, J.1
Pagie, L.2
Ortabozkoyun, H.3
Boyle, S.4
de Vries, S.S.5
Janssen, H.6
Amendola, M.7
Nolen, L.D.8
Bickmore, W.A.9
van Steensel, B.10
-
70
-
-
84875200698
-
Functional implications of genome topology
-
Cavalli G., Misteli T. Functional implications of genome topology. Nat Struct Mol Biol 2013, 20:290-299.
-
(2013)
Nat Struct Mol Biol
, vol.20
, pp. 290-299
-
-
Cavalli, G.1
Misteli, T.2
-
71
-
-
70349873824
-
Comprehensive mapping of long-range interactions reveals folding principles of the human genome
-
Lieberman-Aiden E., van Berkum N.L., Williams L., Imakaev M., Ragoczy T., Telling A., Amit I., Lajoie B.R., Sabo P.J., Dorschner M.O., et al. Comprehensive mapping of long-range interactions reveals folding principles of the human genome. Science 2009, 326:289-293.
-
(2009)
Science
, vol.326
, pp. 289-293
-
-
Lieberman-Aiden, E.1
van Berkum, N.L.2
Williams, L.3
Imakaev, M.4
Ragoczy, T.5
Telling, A.6
Amit, I.7
Lajoie, B.R.8
Sabo, P.J.9
Dorschner, M.O.10
-
72
-
-
84921915746
-
Functional redundancy in the nuclear compartmentalization of the late-replicating genome
-
Ragoczy T., Telling A., Scalzo D., Kooperberg C., Groudine M. Functional redundancy in the nuclear compartmentalization of the late-replicating genome. Nucleus 2014, 5:626-635.
-
(2014)
Nucleus
, vol.5
, pp. 626-635
-
-
Ragoczy, T.1
Telling, A.2
Scalzo, D.3
Kooperberg, C.4
Groudine, M.5
-
73
-
-
78149295090
-
High-resolution whole-genome sequencing reveals that specific chromatin domains from most human chromosomes associate with nucleoli
-
van Koningsbruggen S., Gierlinski M., Schofield P., Martin D., Barton G.J., Ariyurek Y., den Dunnen J.T., Lamond A.I. High-resolution whole-genome sequencing reveals that specific chromatin domains from most human chromosomes associate with nucleoli. Mol Biol Cell 2010, 21:3735-3748.
-
(2010)
Mol Biol Cell
, vol.21
, pp. 3735-3748
-
-
van Koningsbruggen, S.1
Gierlinski, M.2
Schofield, P.3
Martin, D.4
Barton, G.J.5
Ariyurek, Y.6
den Dunnen, J.T.7
Lamond, A.I.8
-
74
-
-
84920871341
-
Directed targeting of chromatin to the nuclear lamina is mediated by chromatin state and A-type lamins
-
Harr J.C., Luperchio T.R., Wong X., Cohen E., Wheelan S.J., Reddy K.L. Directed targeting of chromatin to the nuclear lamina is mediated by chromatin state and A-type lamins. J Cell Biol 2015, 208:33-52.
-
(2015)
J Cell Biol
, vol.208
, pp. 33-52
-
-
Harr, J.C.1
Luperchio, T.R.2
Wong, X.3
Cohen, E.4
Wheelan, S.J.5
Reddy, K.L.6
-
75
-
-
84934311709
-
Proliferation-dependent positioning of individual centromeres in the interphase nucleus of human lymphoblastoid cell lines
-
Ollion J., Loll F., Cochennec J., Boudier T., Escude C. Proliferation-dependent positioning of individual centromeres in the interphase nucleus of human lymphoblastoid cell lines. Mol Biol Cell 2015, 26:2550-2560.
-
(2015)
Mol Biol Cell
, vol.26
, pp. 2550-2560
-
-
Ollion, J.1
Loll, F.2
Cochennec, J.3
Boudier, T.4
Escude, C.5
-
76
-
-
84908501892
-
Nucleolar tethering mediates pairing between the IgH and Myc loci
-
Strongin D.E., Groudine M., Politz J.C. Nucleolar tethering mediates pairing between the IgH and Myc loci. Nucleus 2014, 5:474-481.
-
(2014)
Nucleus
, vol.5
, pp. 474-481
-
-
Strongin, D.E.1
Groudine, M.2
Politz, J.C.3
-
77
-
-
84943200502
-
The 4D nucleome: evidence for a dynamic nuclear landscape based on co-aligned active and inactive nuclear compartments
-
Cremer T., Cremer M., Hubner B., Strickfaden H., Smeets D., Popken J., Sterr M., Markaki Y., Rippe K., Cremer C. The 4D nucleome: evidence for a dynamic nuclear landscape based on co-aligned active and inactive nuclear compartments. FEBS Lett 2015.
-
(2015)
FEBS Lett
-
-
Cremer, T.1
Cremer, M.2
Hubner, B.3
Strickfaden, H.4
Smeets, D.5
Popken, J.6
Sterr, M.7
Markaki, Y.8
Rippe, K.9
Cremer, C.10
|