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Volumn 16, Issue 1, 2015, Pages

The lncRNA Firre anchors the inactive X chromosome to the nucleolus by binding CTCF and maintains H3K27me3 methylation

Author keywords

[No Author keywords available]

Indexed keywords

COHESIN; CCCTC-BINDING FACTOR; FIRRE LONG NON CODING RNA, MOUSE; HISTONE DEMETHYLASE; KDM6B PROTEIN, MOUSE; LONG UNTRANSLATED RNA; REPRESSOR PROTEIN;

EID: 84938412430     PISSN: 14747596     EISSN: 1474760X     Source Type: Journal    
DOI: 10.1186/s13059-015-0618-0     Document Type: Article
Times cited : (201)

References (80)
  • 1
    • 7144223296 scopus 로고
    • Gene action in the X-chromosome of the mouse (Mus musculus L)
    • Lyon M. Gene action in the X-chromosome of the mouse (Mus musculus L). Nature. 1961;190:372-3.
    • (1961) Nature. , vol.190 , pp. 372-373
    • Lyon, M.1
  • 2
    • 84884331196 scopus 로고    scopus 로고
    • X chromosome inactivation and epigenetic responses to cellular reprogramming
    • Lessing D, Lee JT. X chromosome inactivation and epigenetic responses to cellular reprogramming. Annu Rev Genomics Hum Genet. 2013;14:85-110.
    • (2013) Annu Rev Genomics Hum Genet. , vol.14 , pp. 85-110
    • Lessing, D.1    Lee, J.T.2
  • 3
    • 84877818467 scopus 로고    scopus 로고
    • Role and control of X chromosome dosage in mammalian development
    • Schulz EG, Heard E. Role and control of X chromosome dosage in mammalian development. Curr Opin Genet Dev. 2013;23:109-15.
    • (2013) Curr Opin Genet Dev. , vol.23 , pp. 109-115
    • Schulz, E.G.1    Heard, E.2
  • 4
    • 84879642373 scopus 로고    scopus 로고
    • The Xist lncRNA exploits three-dimensional genome architecture to spread across the X chromosome
    • Engreitz JM, Pandya-Jones A, McDonel P, Shishkin A, Sirokman K, Surka C, et al. The Xist lncRNA exploits three-dimensional genome architecture to spread across the X chromosome. Science. 2013;341:1237973.
    • (2013) Science. , vol.341 , pp. 1237973
    • Engreitz, J.M.1    Pandya-Jones, A.2    McDonel, P.3    Shishkin, A.4    Sirokman, K.5    Surka, C.6
  • 5
    • 84890549512 scopus 로고    scopus 로고
    • High-resolution Xist binding maps reveal two-step spreading during X-chromosome inactivation
    • Simon MD, Pinter SF, Fang R, Sarma K, Rutenberg-Schoenberg M, Bowman SK, et al. High-resolution Xist binding maps reveal two-step spreading during X-chromosome inactivation. Nature. 2013;504:465-9.
    • (2013) Nature. , vol.504 , pp. 465-469
    • Simon, M.D.1    Pinter, S.F.2    Fang, R.3    Sarma, K.4    Rutenberg-Schoenberg, M.5    Bowman, S.K.6
  • 6
    • 33746069681 scopus 로고    scopus 로고
    • Dosage compensation in mammals: fine-tuning the expression of the X chromosome
    • Heard E, Disteche CM. Dosage compensation in mammals: fine-tuning the expression of the X chromosome. Genes Dev. 2006;20:1848-67.
    • (2006) Genes Dev. , vol.20 , pp. 1848-1867
    • Heard, E.1    Disteche, C.M.2
  • 7
    • 0020987354 scopus 로고
    • Mammalian X-chromosome inactivation
    • Gartler SM, Riggs AD. Mammalian X-chromosome inactivation. Annu Rev Genet. 1983;17:155-90.
    • (1983) Annu Rev Genet. , vol.17 , pp. 155-190
    • Gartler, S.M.1    Riggs, A.D.2
  • 8
    • 84865097073 scopus 로고    scopus 로고
    • Smchd1-dependent and -independent pathways determine developmental dynamics of CpG island methylation on the inactive x chromosome
    • Gendrel AV, Apedaile A, Coker H, Termanis A, Zvetkova I, Godwin J, et al. Smchd1-dependent and -independent pathways determine developmental dynamics of CpG island methylation on the inactive x chromosome. Dev Cell. 2012;23:265-79.
    • (2012) Dev Cell. , vol.23 , pp. 265-279
    • Gendrel, A.V.1    Apedaile, A.2    Coker, H.3    Termanis, A.4    Zvetkova, I.5    Godwin, J.6
  • 9
    • 0028212159 scopus 로고
    • The human X-inactivation centre is not required for maintenance of X- chromosome inactivation
    • Brown CJ, Willard HF. The human X-inactivation centre is not required for maintenance of X- chromosome inactivation. Nature. 1994;368:154-6.
    • (1994) Nature. , vol.368 , pp. 154-156
    • Brown, C.J.1    Willard, H.F.2
  • 11
    • 0035858882 scopus 로고    scopus 로고
    • Synergism of Xist RNA, DNA methylation, and histone hypoacetylation in maintaining X chromosome inactivation
    • Csankovszki G, Nagy A, Jaenisch R. Synergism of Xist RNA, DNA methylation, and histone hypoacetylation in maintaining X chromosome inactivation. J Cell Biol. 2001;153:773-84.
    • (2001) J Cell Biol. , vol.153 , pp. 773-784
    • Csankovszki, G.1    Nagy, A.2    Jaenisch, R.3
  • 12
    • 79961090805 scopus 로고    scopus 로고
    • Evolutionary diversity and developmental regulation of X-chromosome inactivation
    • Escamilla-Del-Arenal M, da Rocha ST, Heard E. Evolutionary diversity and developmental regulation of X-chromosome inactivation. Hum Genet. 2011;130:307-27.
    • (2011) Hum Genet. , vol.130 , pp. 307-327
    • Escamilla-Del-Arenal, M.1    Rocha, S.T.2    Heard, E.3
  • 14
    • 84922706546 scopus 로고    scopus 로고
    • Noncoding RNAs and epigenetic mechanisms during X-chromosome inactivation
    • Gendrel AV, Heard E. Noncoding RNAs and epigenetic mechanisms during X-chromosome inactivation. Annu Rev Cell Dev Biol. 2014;30:561-80.
    • (2014) Annu Rev Cell Dev Biol. , vol.30 , pp. 561-580
    • Gendrel, A.V.1    Heard, E.2
  • 15
    • 33645153558 scopus 로고    scopus 로고
    • The Polycomb group protein Eed protects the inactive X-chromosome from differentiation-induced reactivation
    • Kalantry S, Mills KC, Yee D, Otte AP, Panning B, Magnuson T. The Polycomb group protein Eed protects the inactive X-chromosome from differentiation-induced reactivation. Nat Cell Biol. 2006;8:195-202.
    • (2006) Nat Cell Biol. , vol.8 , pp. 195-202
    • Kalantry, S.1    Mills, K.C.2    Yee, D.3    Otte, A.P.4    Panning, B.5    Magnuson, T.6
  • 17
    • 77951794067 scopus 로고    scopus 로고
    • Global survey of escape from X inactivation by RNA-sequencing in mouse
    • Yang F, Babak T, Shendure J, Disteche CM. Global survey of escape from X inactivation by RNA-sequencing in mouse. Genome Res. 2010;20:614-22.
    • (2010) Genome Res. , vol.20 , pp. 614-622
    • Yang, F.1    Babak, T.2    Shendure, J.3    Disteche, C.M.4
  • 18
    • 84870009618 scopus 로고    scopus 로고
    • Site-specific silencing of regulatory elements as a mechanism of X inactivation
    • Calabrese JM, Sun W, Song L, Mugford JW, Williams L, Yee D, et al. Site-specific silencing of regulatory elements as a mechanism of X inactivation. Cell. 2012;151:951-63.
    • (2012) Cell. , vol.151 , pp. 951-963
    • Calabrese, J.M.1    Sun, W.2    Song, L.3    Mugford, J.W.4    Williams, L.5    Yee, D.6
  • 19
    • 84897575650 scopus 로고    scopus 로고
    • Maternal bias and escape from X chromosome imprinting in the midgestation mouse placenta
    • Finn EH, Smith CL, Rodriguez J, Sidow A, Baker JC. Maternal bias and escape from X chromosome imprinting in the midgestation mouse placenta. Dev Biol. 2014;390:80-92.
    • (2014) Dev Biol. , vol.390 , pp. 80-92
    • Finn, E.H.1    Smith, C.L.2    Rodriguez, J.3    Sidow, A.4    Baker, J.C.5
  • 20
    • 84891818179 scopus 로고    scopus 로고
    • Cellular resolution maps of X chromosome inactivation: implications for neural development, function, and disease
    • Wu H, Luo J, Yu H, Rattner A, Mo A, Wang Y, et al. Cellular resolution maps of X chromosome inactivation: implications for neural development, function, and disease. Neuron. 2014;81:103-19.
    • (2014) Neuron. , vol.81 , pp. 103-119
    • Wu, H.1    Luo, J.2    Yu, H.3    Rattner, A.4    Mo, A.5    Wang, Y.6
  • 23
    • 79955540235 scopus 로고    scopus 로고
    • Live-cell chromosome dynamics and outcome of X chromosome pairing events during ES cell differentiation
    • Masui O, Bonnet I, Le Baccon P, Brito I, Pollex T, Murphy N, et al. Live-cell chromosome dynamics and outcome of X chromosome pairing events during ES cell differentiation. Cell. 2011;145:447-58.
    • (2011) Cell. , vol.145 , pp. 447-458
    • Masui, O.1    Bonnet, I.2    Baccon, P.3    Brito, I.4    Pollex, T.5    Murphy, N.6
  • 24
    • 79956306617 scopus 로고    scopus 로고
    • Regulation of X-chromosome inactivation by the X-inactivation centre
    • Augui S, Nora EP, Heard E. Regulation of X-chromosome inactivation by the X-inactivation centre. Nat Rev Genet. 2011;12:429-42.
    • (2011) Nat Rev Genet. , vol.12 , pp. 429-442
    • Augui, S.1    Nora, E.P.2    Heard, E.3
  • 25
    • 85045484695 scopus 로고
    • A morphological distinction between neurones of the male and female, and the behaviour of the nucleolar satellite during accelerated nucleoprotein synthesis
    • Barr ML, Bertram EG. A morphological distinction between neurones of the male and female, and the behaviour of the nucleolar satellite during accelerated nucleoprotein synthesis. Nature. 1949;163:676.
    • (1949) Nature. , vol.163 , pp. 676
    • Barr, M.L.1    Bertram, E.G.2
  • 26
    • 0042379770 scopus 로고    scopus 로고
    • Chromatin of the Barr body: histone and non-histone proteins associated with or excluded from the inactive X chromosome
    • Chadwick BP, Willard HF. Chromatin of the Barr body: histone and non-histone proteins associated with or excluded from the inactive X chromosome. Hum Mol Genet. 2003;12:2167-78.
    • (2003) Hum Mol Genet. , vol.12 , pp. 2167-2178
    • Chadwick, B.P.1    Willard, H.F.2
  • 27
    • 34249006523 scopus 로고    scopus 로고
    • Perinucleolar targeting of the inactive X during S phase: evidence for a role in the maintenance of silencing
    • Zhang LF, Huynh KD, Lee JT. Perinucleolar targeting of the inactive X during S phase: evidence for a role in the maintenance of silencing. Cell. 2007;129:693-706.
    • (2007) Cell. , vol.129 , pp. 693-706
    • Zhang, L.F.1    Huynh, K.D.2    Lee, J.T.3
  • 28
    • 35348924169 scopus 로고    scopus 로고
    • Genetics and epigenetics of the multifunctional protein CTCF
    • Filippova GN. Genetics and epigenetics of the multifunctional protein CTCF. Curr Top Dev Biol. 2008;80:337-60.
    • (2008) Curr Top Dev Biol. , vol.80 , pp. 337-360
    • Filippova, G.N.1
  • 29
    • 67549119096 scopus 로고    scopus 로고
    • CTCF: master weaver of the genome
    • Phillips JE, Corces VG. CTCF: master weaver of the genome. Cell. 2009;137:1194-211.
    • (2009) Cell. , vol.137 , pp. 1194-1211
    • Phillips, J.E.1    Corces, V.G.2
  • 30
    • 84899415536 scopus 로고    scopus 로고
    • CTCF: an architectural protein bridging genome topology and function
    • Ong CT, Corces VG. CTCF: an architectural protein bridging genome topology and function. Nat Rev Genet. 2014;15:234-46.
    • (2014) Nat Rev Genet. , vol.15 , pp. 234-246
    • Ong, C.T.1    Corces, V.G.2
  • 32
    • 84875127327 scopus 로고    scopus 로고
    • CTCF and cohesin: linking gene regulatory elements with their targets
    • Merkenschlager M, Odom DT. CTCF and cohesin: linking gene regulatory elements with their targets. Cell. 2013;152:1285-97.
    • (2013) Cell. , vol.152 , pp. 1285-1297
    • Merkenschlager, M.1    Odom, D.T.2
  • 33
    • 0842310349 scopus 로고    scopus 로고
    • CTCF tethers an insulator to subnuclear sites, suggesting shared insulator mechanisms across species
    • Yusufzai TM, Tagami H, Nakatani Y, Felsenfeld G. CTCF tethers an insulator to subnuclear sites, suggesting shared insulator mechanisms across species. Mol Cell. 2004;13:291-8.
    • (2004) Mol Cell. , vol.13 , pp. 291-298
    • Yusufzai, T.M.1    Tagami, H.2    Nakatani, Y.3    Felsenfeld, G.4
  • 34
    • 2942537834 scopus 로고    scopus 로고
    • The 5'-HS4 chicken {beta}-globin insulator is a CTCF-dependent nuclear matrix-associated element
    • Yusufzai TM, Felsenfeld G. The 5'-HS4 chicken {beta}-globin insulator is a CTCF-dependent nuclear matrix-associated element. Proc Natl Acad Sci U S A. 2004;101:8620-4.
    • (2004) Proc Natl Acad Sci U S A. , vol.101 , pp. 8620-8624
    • Yusufzai, T.M.1    Felsenfeld, G.2
  • 35
    • 69249208461 scopus 로고    scopus 로고
    • Identification of a perinuclear positioning element in human subtelomeres that requires A-type lamins and CTCF
    • Ottaviani A, Schluth-Bolard C, Rival-Gervier S, Boussouar A, Rondier D, Foerster AM, et al. Identification of a perinuclear positioning element in human subtelomeres that requires A-type lamins and CTCF. EMBO J. 2009;28:2428-36.
    • (2009) EMBO J. , vol.28 , pp. 2428-2436
    • Ottaviani, A.1    Schluth-Bolard, C.2    Rival-Gervier, S.3    Boussouar, A.4    Rondier, D.5    Foerster, A.M.6
  • 37
    • 11244258156 scopus 로고    scopus 로고
    • Boundaries between chromosomal domains of X inactivation and escape bind CTCF and lack CpG methylation during early development
    • Filippova GN, Cheng MK, Moore JM, Truong JP, Hu YJ, Nguyen DK, et al. Boundaries between chromosomal domains of X inactivation and escape bind CTCF and lack CpG methylation during early development. Dev Cell. 2005;8:31-42.
    • (2005) Dev Cell. , vol.8 , pp. 31-42
    • Filippova, G.N.1    Cheng, M.K.2    Moore, J.M.3    Truong, J.P.4    Hu, Y.J.5    Nguyen, D.K.6
  • 38
    • 48949102889 scopus 로고    scopus 로고
    • DXZ4 chromatin adopts an opposing conformation to that of the surrounding chromosome and acquires a novel inactive X-specific role involving CTCF and antisense transcripts
    • Chadwick BP. DXZ4 chromatin adopts an opposing conformation to that of the surrounding chromosome and acquires a novel inactive X-specific role involving CTCF and antisense transcripts. Genome Res. 2008;18:1259-69.
    • (2008) Genome Res. , vol.18 , pp. 1259-1269
    • Chadwick, B.P.1
  • 39
    • 84867116639 scopus 로고    scopus 로고
    • THE macrosatellite dxz4 mediates ctcf-dependent long-range intrachromosomal interactions on the human inactive X chromosome
    • Horakova AH, Moseley SC, McLaughlin CR, Tremblay DC, Chadwick BP. THE macrosatellite dxz4 mediates ctcf-dependent long-range intrachromosomal interactions on the human inactive X chromosome. Hum Mol Genet. 2012;21:4367-77.
    • (2012) Hum Mol Genet. , vol.21 , pp. 4367-4377
    • Horakova, A.H.1    Moseley, S.C.2    McLaughlin, C.R.3    Tremblay, D.C.4    Chadwick, B.P.5
  • 40
    • 84919949716 scopus 로고    scopus 로고
    • A 3D Map of the human genome at kilobase resolution reveals principles of chromatin looping
    • Rao SS, Huntley MH, Durand NC, Stamenova EK, Bochkov ID, Robinson JT, et al. A 3D Map of the human genome at kilobase resolution reveals principles of chromatin looping. Cell. 2014;159:1665-80.
    • (2014) Cell. , vol.159 , pp. 1665-1680
    • Rao, S.S.1    Huntley, M.H.2    Durand, N.C.3    Stamenova, E.K.4    Bochkov, I.D.5    Robinson, J.T.6
  • 41
    • 38849121606 scopus 로고    scopus 로고
    • Cohesins functionally associate with CTCF on mammalian Chromosome Arms
    • Parelho V, Hadjur S, Spivakov M, Leleu M, Sauer S, Gregson HC, et al. Cohesins functionally associate with CTCF on mammalian Chromosome Arms. Cell. 2008;132:422-33.
    • (2008) Cell. , vol.132 , pp. 422-433
    • Parelho, V.1    Hadjur, S.2    Spivakov, M.3    Leleu, M.4    Sauer, S.5    Gregson, H.C.6
  • 42
    • 39149121436 scopus 로고    scopus 로고
    • Cohesin mediates transcriptional insulation by CCCTC-binding factor
    • Wendt KS, Yoshida K, Itoh T, Bando M, Koch B, Schirghuber E, et al. Cohesin mediates transcriptional insulation by CCCTC-binding factor. Nature. 2008;451:796-801.
    • (2008) Nature. , vol.451 , pp. 796-801
    • Wendt, K.S.1    Yoshida, K.2    Itoh, T.3    Bando, M.4    Koch, B.5    Schirghuber, E.6
  • 43
    • 39449111307 scopus 로고    scopus 로고
    • Cohesins localize with CTCF at the KSHV latency control region and at cellular c-myc and H19/Igf2 insulators
    • Stedman W, Kang H, Lin S, Kissil JL, Bartolomei MS, Lieberman PM. Cohesins localize with CTCF at the KSHV latency control region and at cellular c-myc and H19/Igf2 insulators. EMBO J. 2008;27:654-66.
    • (2008) EMBO J. , vol.27 , pp. 654-666
    • Stedman, W.1    Kang, H.2    Lin, S.3    Kissil, J.L.4    Bartolomei, M.S.5    Lieberman, P.M.6
  • 47
    • 84876420573 scopus 로고    scopus 로고
    • Mammalian X upregulation is associated with enhanced transcription initiation, RNA half-life, and MOF-mediated H4K16 acetylation
    • Deng X, Berletch JB, Ma W, Nguyen DK, Hiatt JB, Noble WS, et al. Mammalian X upregulation is associated with enhanced transcription initiation, RNA half-life, and MOF-mediated H4K16 acetylation. Dev Cell. 2013;25:55-68.
    • (2013) Dev Cell. , vol.25 , pp. 55-68
    • Deng, X.1    Berletch, J.B.2    Ma, W.3    Nguyen, D.K.4    Hiatt, J.B.5    Noble, W.S.6
  • 48
    • 79953300078 scopus 로고    scopus 로고
    • FIMO: scanning for occurrences of a given motif
    • Grant CE, Bailey TL, Noble WS. FIMO: scanning for occurrences of a given motif. Bioinformatics. 2011;27:1017-8.
    • (2011) Bioinformatics. , vol.27 , pp. 1017-1018
    • Grant, C.E.1    Bailey, T.L.2    Noble, W.S.3
  • 49
    • 84921539874 scopus 로고    scopus 로고
    • Locus-specific targeting to the X chromosome revealed by the RNA interactome of CTCF
    • Kung JT, Kesner B, An JY, Ahn JY, Cifuentes-Rojas C, Colognori D, et al. Locus-specific targeting to the X chromosome revealed by the RNA interactome of CTCF. Mol Cell. 2015;57:361-75.
    • (2015) Mol Cell. , vol.57 , pp. 361-375
    • Kung, J.T.1    Kesner, B.2    An, J.Y.3    Ahn, J.Y.4    Cifuentes-Rojas, C.5    Colognori, D.6
  • 50
    • 84865051224 scopus 로고    scopus 로고
    • The mouse DXZ4 homolog retains Ctcf binding and proximity to Pls3 despite substantial organizational differences compared to the primate macrosatellite
    • Horakova AH, Calabrese JM, McLaughlin CR, Tremblay DC, Magnuson T, Chadwick BP. The mouse DXZ4 homolog retains Ctcf binding and proximity to Pls3 despite substantial organizational differences compared to the primate macrosatellite. Genome Biol. 2012;13:R70.
    • (2012) Genome Biol. , vol.13 , pp. R70
    • Horakova, A.H.1    Calabrese, J.M.2    McLaughlin, C.R.3    Tremblay, D.C.4    Magnuson, T.5    Chadwick, B.P.6
  • 51
    • 84908412361 scopus 로고    scopus 로고
    • Small RNA expression from the human macrosatellite DXZ4
    • Pohlers M, Calabrese JM, Magnuson T. Small RNA expression from the human macrosatellite DXZ4. G3 (Bethesda). 2014;4:1981-9.
    • (2014) G3 (Bethesda) , vol.4 , pp. 1981-1989
    • Pohlers, M.1    Calabrese, J.M.2    Magnuson, T.3
  • 52
    • 61449172037 scopus 로고    scopus 로고
    • Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources
    • da Huang W, Sherman BT, Lempicki RA. Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources. Nat Protoc. 2009;4:44-57.
    • (2009) Nat Protoc. , vol.4 , pp. 44-57
    • Huang, W.1    Sherman, B.T.2    Lempicki, R.A.3
  • 53
    • 58549109636 scopus 로고    scopus 로고
    • X chromosome dosage compensation: how mammals keep the balance
    • Payer B, Lee JT. X chromosome dosage compensation: how mammals keep the balance. Annu Rev Genet. 2008;42:733-72.
    • (2008) Annu Rev Genet. , vol.42 , pp. 733-772
    • Payer, B.1    Lee, J.T.2
  • 54
    • 67650076211 scopus 로고    scopus 로고
    • The pluripotency factor Oct4 interacts with Ctcf and also controls X-chromosome pairing and counting
    • Donohoe ME, Silva SS, Pinter SF, Xu N, Lee JT. The pluripotency factor Oct4 interacts with Ctcf and also controls X-chromosome pairing and counting. Nature. 2009;460:128-32.
    • (2009) Nature. , vol.460 , pp. 128-132
    • Donohoe, M.E.1    Silva, S.S.2    Pinter, S.F.3    Xu, N.4    Lee, J.T.5
  • 57
    • 84897042327 scopus 로고    scopus 로고
    • Nucleolus and nuclear periphery: velcro for heterochromatin
    • Padeken J, Heun P. Nucleolus and nuclear periphery: velcro for heterochromatin. Curr Opin Cell Biol. 2014;28:54-60.
    • (2014) Curr Opin Cell Biol. , vol.28 , pp. 54-60
    • Padeken, J.1    Heun, P.2
  • 59
    • 84863723258 scopus 로고    scopus 로고
    • Rsx is a metatherian RNA with Xist-like properties in X-chromosome inactivation
    • Grant J, Mahadevaiah SK, Khil P, Sangrithi MN, Royo H, Duckworth J, et al. Rsx is a metatherian RNA with Xist-like properties in X-chromosome inactivation. Nature. 2012;487:254-8.
    • (2012) Nature. , vol.487 , pp. 254-258
    • Grant, J.1    Mahadevaiah, S.K.2    Khil, P.3    Sangrithi, M.N.4    Royo, H.5    Duckworth, J.6
  • 60
    • 47249139022 scopus 로고    scopus 로고
    • The chromosome glue gets a little stickier
    • McNairn AJ, Gerton JL. The chromosome glue gets a little stickier. Trends Genet. 2008;24:382-9.
    • (2008) Trends Genet. , vol.24 , pp. 382-389
    • McNairn, A.J.1    Gerton, J.L.2
  • 61
    • 84876879922 scopus 로고    scopus 로고
    • The nucleoplasmin homolog NLP mediates centromere clustering and anchoring to the nucleolus
    • Padeken J, Mendiburo MJ, Chlamydas S, Schwarz HJ, Kremmer E, Heun P. The nucleoplasmin homolog NLP mediates centromere clustering and anchoring to the nucleolus. Mol Cell. 2013;50:236-49.
    • (2013) Mol Cell. , vol.50 , pp. 236-249
    • Padeken, J.1    Mendiburo, M.J.2    Chlamydas, S.3    Schwarz, H.J.4    Kremmer, E.5    Heun, P.6
  • 62
    • 84857331867 scopus 로고    scopus 로고
    • Base-resolution analyses of sequence and parent-of-origin dependent DNA methylation in the mouse genome
    • Xie W, Barr CL, Kim A, Yue F, Lee AY, Eubanks J, et al. Base-resolution analyses of sequence and parent-of-origin dependent DNA methylation in the mouse genome. Cell. 2012;148:816-31.
    • (2012) Cell. , vol.148 , pp. 816-831
    • Xie, W.1    Barr, C.L.2    Kim, A.3    Yue, F.4    Lee, A.Y.5    Eubanks, J.6
  • 64
    • 0033529654 scopus 로고    scopus 로고
    • The protein CTCF is required for the enhancer blocking activity of vertebrate insulators
    • Bell AC, West AG, Felsenfeld G. The protein CTCF is required for the enhancer blocking activity of vertebrate insulators. Cell. 1999;98:387-96.
    • (1999) Cell. , vol.98 , pp. 387-396
    • Bell, A.C.1    West, A.G.2    Felsenfeld, G.3
  • 65
    • 0026865003 scopus 로고
    • A novel GC-rich human macrosatellite VNTR in Xq24 is differentially methylated on active and inactive X chromosomes
    • Giacalone J, Friedes J, Francke U. A novel GC-rich human macrosatellite VNTR in Xq24 is differentially methylated on active and inactive X chromosomes. Nat Genet. 1992;1:137-43.
    • (1992) Nat Genet. , vol.1 , pp. 137-143
    • Giacalone, J.1    Friedes, J.2    Francke, U.3
  • 67
    • 54049138948 scopus 로고    scopus 로고
    • Kcnq1ot1 antisense noncoding RNA mediates lineage-specific transcriptional silencing through chromatin-level regulation
    • Pandey RR, Mondal T, Mohammad F, Enroth S, Redrup L, Komorowski J, et al. Kcnq1ot1 antisense noncoding RNA mediates lineage-specific transcriptional silencing through chromatin-level regulation. Mol Cell. 2008;32:232-46.
    • (2008) Mol Cell. , vol.32 , pp. 232-246
    • Pandey, R.R.1    Mondal, T.2    Mohammad, F.3    Enroth, S.4    Redrup, L.5    Komorowski, J.6
  • 68
    • 84883139798 scopus 로고    scopus 로고
    • Differentiation-driven nucleolar association of the mouse imprinted Kcnq1 locus
    • Fedoriw AM, Calabrese JM, Mu W, Yee D, Magnuson T. Differentiation-driven nucleolar association of the mouse imprinted Kcnq1 locus. G3 (Bethesda). 2012;2:1521-8.
    • (2012) G3 (Bethesda) , vol.2 , pp. 1521-1528
    • Fedoriw, A.M.1    Calabrese, J.M.2    Mu, W.3    Yee, D.4    Magnuson, T.5
  • 69
    • 0032805149 scopus 로고    scopus 로고
    • Conditional deletion of Xist disrupts histone macroH2A localization but not maintenance of X inactivation
    • Csankovszki G, Panning B, Bates B, Pehrson JR, Jaenisch R. Conditional deletion of Xist disrupts histone macroH2A localization but not maintenance of X inactivation. Nat Genet. 1999;22:323-4.
    • (1999) Nat Genet. , vol.22 , pp. 323-324
    • Csankovszki, G.1    Panning, B.2    Bates, B.3    Pehrson, J.R.4    Jaenisch, R.5
  • 70
    • 84879603009 scopus 로고    scopus 로고
    • Reactivation of the inactive X chromosome in development and reprogramming
    • Ohhata T, Wutz A. Reactivation of the inactive X chromosome in development and reprogramming. Cell Mol Life Sci. 2012;70:2443-61.
    • (2012) Cell Mol Life Sci. , vol.70 , pp. 2443-2461
    • Ohhata, T.1    Wutz, A.2
  • 71
    • 0025360755 scopus 로고
    • 5-Azacytidine-induced reactivation of the human X chromosome-linked PGK1 gene is associated with a large region of cytosine demethylation in the 5' CpG island
    • Hansen RS, Gartler SM. 5-Azacytidine-induced reactivation of the human X chromosome-linked PGK1 gene is associated with a large region of cytosine demethylation in the 5' CpG island. Proc Natl Acad Sci U S A. 1990;87:4174-8.
    • (1990) Proc Natl Acad Sci U S A. , vol.87 , pp. 4174-4178
    • Hansen, R.S.1    Gartler, S.M.2
  • 73
    • 60749087716 scopus 로고    scopus 로고
    • A proximal conserved repeat in the Xist gene is essential as a genomic element for X-inactivation in mouse
    • Hoki Y, Kimura N, Kanbayashi M, Amakawa Y, Ohhata T, Sasaki H, et al. A proximal conserved repeat in the Xist gene is essential as a genomic element for X-inactivation in mouse. Development. 2009;136:139-46.
    • (2009) Development. , vol.136 , pp. 139-146
    • Hoki, Y.1    Kimura, N.2    Kanbayashi, M.3    Amakawa, Y.4    Ohhata, T.5    Sasaki, H.6
  • 75
    • 27144510368 scopus 로고    scopus 로고
    • Genome-scale profiling of histone H3.3 replacement patterns
    • Mito Y, Henikoff JG, Henikoff S. Genome-scale profiling of histone H3.3 replacement patterns. Nat Genet. 2005;37:1090-7.
    • (2005) Nat Genet. , vol.37 , pp. 1090-1097
    • Mito, Y.1    Henikoff, J.G.2    Henikoff, S.3
  • 76
    • 0034935016 scopus 로고    scopus 로고
    • CTCF-binding sites flank CTG/CAG repeats and form a methylation- sensitive insulator at the DM1 locus
    • Filippova GN, Thienes CP, Penn BH, Cho DH, Hu YJ, Moore JM, et al. CTCF-binding sites flank CTG/CAG repeats and form a methylation- sensitive insulator at the DM1 locus. Nat Genet. 2001;28:335-43.
    • (2001) Nat Genet. , vol.28 , pp. 335-343
    • Filippova, G.N.1    Thienes, C.P.2    Penn, B.H.3    Cho, D.H.4    Hu, Y.J.5    Moore, J.M.6
  • 77
    • 0035336967 scopus 로고    scopus 로고
    • Histone H2A variants and the inactive X chromosome: identification of a second macroH2A variant
    • Chadwick BP, Willard HF. Histone H2A variants and the inactive X chromosome: identification of a second macroH2A variant. Hum Mol Genet. 2001;10:1101-13.
    • (2001) Hum Mol Genet. , vol.10 , pp. 1101-1113
    • Chadwick, B.P.1    Willard, H.F.2
  • 78
    • 33646033137 scopus 로고    scopus 로고
    • A lentiviral RNAi library for human and mouse genes applied to an arrayed viral high-content screen
    • Moffat J, Grueneberg DA, Yang X, Kim SY, Kloepfer AM, Hinkle G, et al. A lentiviral RNAi library for human and mouse genes applied to an arrayed viral high-content screen. Cell. 2006;124:1283-98.
    • (2006) Cell. , vol.124 , pp. 1283-1298
    • Moffat, J.1    Grueneberg, D.A.2    Yang, X.3    Kim, S.Y.4    Kloepfer, A.M.5    Hinkle, G.6
  • 79
    • 65449136284 scopus 로고    scopus 로고
    • TopHat: discovering splice junctions with RNA-Seq
    • Trapnell C, Pachter L, Salzberg SL. TopHat: discovering splice junctions with RNA-Seq. Bioinformatics. 2009;25:1105-11.
    • (2009) Bioinformatics. , vol.25 , pp. 1105-1111
    • Trapnell, C.1    Pachter, L.2    Salzberg, S.L.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.