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Volumn 89, Issue , 2015, Pages 20-33

Whole transcriptome analysis reveals a role for OGG1-initiated DNA repair signaling in airway remodeling

Author keywords

8 Oxoguanine; Airway remodeling; OGG1 BER

Indexed keywords

8 HYDROXYGUANINE; 8 HYDROXYGUANINE DNA GLYCOSYLASE 1; ACTIN; CADHERIN; CHEMOKINE; COLLAGEN; CYTOKINE; DNA GLYCOSYLTRANSFERASE; INTEGRIN; MESSENGER RNA; RHO GUANINE NUCLEOTIDE BINDING PROTEIN; TRANSCRIPTOME; TRANSFORMING GROWTH FACTOR BETA; UNCLASSIFIED DRUG; 8-HYDROXYGUANINE; BIOLOGICAL MARKER; GUANINE; OXOGUANINE GLYCOSYLASE 1, HUMAN;

EID: 84941915969     PISSN: 08915849     EISSN: 18734596     Source Type: Journal    
DOI: 10.1016/j.freeradbiomed.2015.07.007     Document Type: Article
Times cited : (31)

References (59)
  • 2
    • 34447572685 scopus 로고    scopus 로고
    • Clinical relevance of airway remodelling in airway diseases
    • A.L. James, and S. Wenzel Clinical relevance of airway remodelling in airway diseases Eur. Respir. J. 30 2007 134 155
    • (2007) Eur. Respir. J. , vol.30 , pp. 134-155
    • James, A.L.1    Wenzel, S.2
  • 3
    • 0038799736 scopus 로고    scopus 로고
    • Oxidative DNA damage: Mechanisms, mutation, and disease
    • M.S. Cooke, M.D. Evans, M. Dizdaroglu, and J. Lunec Oxidative DNA damage: mechanisms, mutation, and disease FASEB J. 17 2003 1195 1214
    • (2003) FASEB J. , vol.17 , pp. 1195-1214
    • Cooke, M.S.1    Evans, M.D.2    Dizdaroglu, M.3    Lunec, J.4
  • 4
    • 0031027125 scopus 로고    scopus 로고
    • How easily oxidizable is DNA? One-electron reduction potentials of adenosine and guanosine radicals in aqueous solution
    • S. Steenken, and S. Jovanovic How easily oxidizable is DNA? One-electron reduction potentials of adenosine and guanosine radicals in aqueous solution J. Am. Chem. Soc. 119 1997 617 618
    • (1997) J. Am. Chem. Soc. , vol.119 , pp. 617-618
    • Steenken, S.1    Jovanovic, S.2
  • 5
    • 0344154463 scopus 로고    scopus 로고
    • Oxidative damage to DNA: Formation, measurement and biochemical features
    • J. Cadet, T. Douki, D. Gasparutto, and J.L. Ravanat Oxidative damage to DNA: formation, measurement and biochemical features Mutat. Res. 531 2003 5 23
    • (2003) Mutat. Res. , vol.531 , pp. 5-23
    • Cadet, J.1    Douki, T.2    Gasparutto, D.3    Ravanat, J.L.4
  • 6
    • 33745805544 scopus 로고    scopus 로고
    • Urinary 8-hydroxyguanine may be a better marker of oxidative stress than 8-hydroxydeoxyguanosine in relation to the life spans of various species
    • P. Svoboda, M. Maekawa, K. Kawai, T. Tominaga, K. Savela, and H. Kasai Urinary 8-hydroxyguanine may be a better marker of oxidative stress than 8-hydroxydeoxyguanosine in relation to the life spans of various species Antioxid. Redox Signaling 8 2006 985 992
    • (2006) Antioxid. Redox Signaling , vol.8 , pp. 985-992
    • Svoboda, P.1    Maekawa, M.2    Kawai, K.3    Tominaga, T.4    Savela, K.5    Kasai, H.6
  • 7
    • 77954563673 scopus 로고    scopus 로고
    • 8-Oxo-7,8-dihydroguanine: Links to gene expression, aging, and defense against oxidative stress
    • Z. Radak, and I. Boldogh 8-Oxo-7,8-dihydroguanine: links to gene expression, aging, and defense against oxidative stress Free Radic. Biol. Med. 49 2010 587 596
    • (2010) Free Radic. Biol. Med. , vol.49 , pp. 587-596
    • Radak, Z.1    Boldogh, I.2
  • 8
    • 34249870372 scopus 로고    scopus 로고
    • 8-Oxo-guanine bypass by human DNA polymerases in the presence of auxiliary proteins
    • G. Maga, G. Villani, E. Crespan, U. Wimmer, E. Ferrari, B. Bertocci, and U. Hubscher 8-Oxo-guanine bypass by human DNA polymerases in the presence of auxiliary proteins Nature 447 2007 606 608
    • (2007) Nature , vol.447 , pp. 606-608
    • Maga, G.1    Villani, G.2    Crespan, E.3    Wimmer, U.4    Ferrari, E.5    Bertocci, B.6    Hubscher, U.7
  • 10
    • 70450260475 scopus 로고    scopus 로고
    • Molecular basis of transcriptional mutagenesis at 8-oxoguanine
    • G.E. Damsma, and P. Cramer Molecular basis of transcriptional mutagenesis at 8-oxoguanine J. Biol. Chem. 284 2009 31658 31663
    • (2009) J. Biol. Chem. , vol.284 , pp. 31658-31663
    • Damsma, G.E.1    Cramer, P.2
  • 12
    • 0345448169 scopus 로고    scopus 로고
    • Substrate specificities and excision kinetics of DNA glycosylases involved in base-excision repair of oxidative DNA damage
    • M. Dizdaroglu Substrate specificities and excision kinetics of DNA glycosylases involved in base-excision repair of oxidative DNA damage Mutat. Res 531 2003 109 126
    • (2003) Mutat. Res , vol.531 , pp. 109-126
    • Dizdaroglu, M.1
  • 16
    • 84905125583 scopus 로고    scopus 로고
    • 8-Oxoguanine DNA glycosylase-1-mediated DNA repair is associated with Rho GTPase activation and α-smooth muscle actin polymerization
    • J. Luo, K. Hosoki, A. Bacsi, Z. Radak, M.L. Hegde, S. Sur, T.K. Hazra, A.R. Brasier, X. Ba, and I. Boldogh 8-Oxoguanine DNA glycosylase-1-mediated DNA repair is associated with Rho GTPase activation and α-smooth muscle actin polymerization Free Radic. Biol. Med. 73 2014 430 438
    • (2014) Free Radic. Biol. Med. , vol.73 , pp. 430-438
    • Luo, J.1    Hosoki, K.2    Bacsi, A.3    Radak, Z.4    Hegde, M.L.5    Sur, S.6    Hazra, T.K.7    Brasier, A.R.8    Ba, X.9    Boldogh, I.10
  • 18
    • 84871270797 scopus 로고    scopus 로고
    • 8-Oxoguanine DNA glycosylase (OGG1) deficiency increases susceptibility to obesity and metabolic dysfunction
    • e51697 2012
    • H. Sampath, V. Vartanian, M.R. Rollins, K. Sakumi, Y. Nakabeppu, and R.S. Lloyd 8-Oxoguanine DNA glycosylase (OGG1) deficiency increases susceptibility to obesity and metabolic dysfunction PLoS One 7 2012 e51697 2012
    • (2012) PLoS One , vol.7
    • Sampath, H.1    Vartanian, V.2    Rollins, M.R.3    Sakumi, K.4    Nakabeppu, Y.5    Lloyd, R.S.6
  • 19
    • 84888135337 scopus 로고    scopus 로고
    • The 8-oxoguanine DNA glycosylase 1 (ogg1) decreases the vulnerability of the developing brain to DNA damage
    • A. Gu, G. Ji, L. Yan, and Y. Zhou The 8-oxoguanine DNA glycosylase 1 (ogg1) decreases the vulnerability of the developing brain to DNA damage DNA Repair (Amsterdam) 12 2013 1094 1104
    • (2013) DNA Repair (Amsterdam) , vol.12 , pp. 1094-1104
    • Gu, A.1    Ji, G.2    Yan, L.3    Zhou, Y.4
  • 23
    • 70349581595 scopus 로고    scopus 로고
    • PANTHER pathway: An ontology-based pathway database coupled with data analysis tools
    • H. Mi, and P. Thomas PANTHER pathway: an ontology-based pathway database coupled with data analysis tools Methods Mol. Biol. 563 2009 123 140
    • (2009) Methods Mol. Biol. , vol.563 , pp. 123-140
    • Mi, H.1    Thomas, P.2
  • 24
    • 84892511644 scopus 로고    scopus 로고
    • Large-scale gene function analysis with the PANTHER classification system
    • H. Mi, A. Muruganujan, J.T. Casagrande, and P.D. Thomas Large-scale gene function analysis with the PANTHER classification system Nat. Protoc. 8 2013 1551 1566
    • (2013) Nat. Protoc. , vol.8 , pp. 1551-1566
    • Mi, H.1    Muruganujan, A.2    Casagrande, J.T.3    Thomas, P.D.4
  • 26
    • 0035710746 scopus 로고    scopus 로고
    • Analysis of relative gene expression data using real-time quantitative PCR and the 2(-ΔΔC(T)) method
    • K.J. Livak, and T.D. Schmittgen Analysis of relative gene expression data using real-time quantitative PCR and the 2(-ΔΔC(T)) method Methods 25 2001 402 408
    • (2001) Methods , vol.25 , pp. 402-408
    • Livak, K.J.1    Schmittgen, T.D.2
  • 27
    • 84894520335 scopus 로고    scopus 로고
    • Beyond E-cadherin: Roles of other cadherin superfamily members in cancer
    • F. van Roy Beyond E-cadherin: roles of other cadherin superfamily members in cancer Nat. Rev. Cancer 14 2014 121 134
    • (2014) Nat. Rev. Cancer , vol.14 , pp. 121-134
    • Van Roy, F.1
  • 28
    • 33845414010 scopus 로고    scopus 로고
    • Cadherins in development: Cell adhesion, sorting, and tissue morphogenesis
    • J.M. Halbleib, and W.J. Nelson Cadherins in development: cell adhesion, sorting, and tissue morphogenesis Genes Dev. 20 2006 3199 3214
    • (2006) Genes Dev. , vol.20 , pp. 3199-3214
    • Halbleib, J.M.1    Nelson, W.J.2
  • 29
    • 77149147440 scopus 로고    scopus 로고
    • The catenin family at a glance
    • P.D. McCrea, and D. Gu The catenin family at a glance J. Cell Sci. 123 2010 637 642
    • (2010) J. Cell Sci. , vol.123 , pp. 637-642
    • McCrea, P.D.1    Gu, D.2
  • 30
    • 33750578091 scopus 로고    scopus 로고
    • Comparative integromics on FAT1, FAT2, FAT3 and FAT4
    • Y. Katoh, and M. Katoh Comparative integromics on FAT1, FAT2, FAT3 and FAT4 Int. J. Mol. Med. 18 2006 523 528
    • (2006) Int. J. Mol. Med. , vol.18 , pp. 523-528
    • Katoh, Y.1    Katoh, M.2
  • 31
    • 84869223135 scopus 로고    scopus 로고
    • Smoking induces epithelial-to-mesenchymal transition in non-small cell lung cancer through HDAC-mediated downregulation of E-cadherin
    • N.S. Nagathihalli, P.P. Massion, A.L. Gonzalez, P. Lu, and P.K. Datta Smoking induces epithelial-to-mesenchymal transition in non-small cell lung cancer through HDAC-mediated downregulation of E-cadherin Mol. Cancer Ther. 11 2012 2362 2372
    • (2012) Mol. Cancer Ther. , vol.11 , pp. 2362-2372
    • Nagathihalli, N.S.1    Massion, P.P.2    Gonzalez, A.L.3    Lu, P.4    Datta, P.K.5
  • 32
    • 80054036560 scopus 로고    scopus 로고
    • Transmembrane collagen receptors
    • B. Leitinger Transmembrane collagen receptors Annu. Rev. Cell Dev. Biol. 27 2011 265 290
    • (2011) Annu. Rev. Cell Dev. Biol. , vol.27 , pp. 265-290
    • Leitinger, B.1
  • 33
    • 79955965565 scopus 로고    scopus 로고
    • The extracellular matrix dimension of skeletal muscle development
    • S. Thorsteinsdottir, M. Deries, A.S. Cachaco, and F. Bajanca The extracellular matrix dimension of skeletal muscle development Dev. Biol. 354 2011 191 207
    • (2011) Dev. Biol. , vol.354 , pp. 191-207
    • Thorsteinsdottir, S.1    Deries, M.2    Cachaco, A.S.3    Bajanca, F.4
  • 34
    • 33744995986 scopus 로고    scopus 로고
    • Laminin isoforms and lung development: All isoforms are not equal
    • N.M. Nguyen, and R.M. Senior Laminin isoforms and lung development: all isoforms are not equal Dev. Biol. 294 2006 271 279
    • (2006) Dev. Biol. , vol.294 , pp. 271-279
    • Nguyen, N.M.1    Senior, R.M.2
  • 35
    • 63449105614 scopus 로고    scopus 로고
    • Effect of extracellular matrix composition on airway epithelial cell and fibroblast structure: Implications for airway remodeling in asthma
    • S.G. Royce, L. Tan, A.A. Koek, and M.L. Tang Effect of extracellular matrix composition on airway epithelial cell and fibroblast structure: implications for airway remodeling in asthma Ann. Allergy Asthma Immunol. 102 2009 238 246
    • (2009) Ann. Allergy Asthma Immunol. , vol.102 , pp. 238-246
    • Royce, S.G.1    Tan, L.2    Koek, A.A.3    Tang, M.L.4
  • 37
    • 77649271537 scopus 로고    scopus 로고
    • The role of formins in filopodia formation
    • H. Mellor The role of formins in filopodia formation Biochim. Biophys. Acta 1803 2010 191 200
    • (2010) Biochim. Biophys. Acta , vol.1803 , pp. 191-200
    • Mellor, H.1
  • 41
    • 33646562542 scopus 로고    scopus 로고
    • The logic of TGFbeta signaling
    • J. Massague, and R.R. Gomis The logic of TGFbeta signaling FEBS Lett. 580 2006 2811 2820
    • (2006) FEBS Lett. , vol.580 , pp. 2811-2820
    • Massague, J.1    Gomis, R.R.2
  • 43
    • 8444243360 scopus 로고    scopus 로고
    • Regulation of muscle mass by myostatin
    • S.J. Lee Regulation of muscle mass by myostatin Annu. Rev. Cell Dev. Biol. 20 2004 61 86
    • (2004) Annu. Rev. Cell Dev. Biol. , vol.20 , pp. 61-86
    • Lee, S.J.1
  • 44
    • 84896538802 scopus 로고    scopus 로고
    • 8-Oxoguanine DNA glycosylase-1 augments proinflammatory gene expression by facilitating the recruitment of site-specific transcription factors
    • X. Ba, A. Bacsi, J. Luo, L. Aguilera-Aguirre, X. Zeng, Z. Radak, A.R. Brasier, and I. Boldogh 8-Oxoguanine DNA glycosylase-1 augments proinflammatory gene expression by facilitating the recruitment of site-specific transcription factors J. Immunol. 192 2014 2384 2394
    • (2014) J. Immunol. , vol.192 , pp. 2384-2394
    • Ba, X.1    Bacsi, A.2    Luo, J.3    Aguilera-Aguirre, L.4    Zeng, X.5    Radak, Z.6    Brasier, A.R.7    Boldogh, I.8
  • 45
    • 84901316606 scopus 로고    scopus 로고
    • Cellular mechanisms and physiological consequences of redox-dependent signalling
    • K.M. Holmstrom, and T. Finkel Cellular mechanisms and physiological consequences of redox-dependent signalling Nat. Rev. Mol. Cell Biol. 15 2014 411 421
    • (2014) Nat. Rev. Mol. Cell Biol. , vol.15 , pp. 411-421
    • Holmstrom, K.M.1    Finkel, T.2
  • 49
    • 84871716320 scopus 로고    scopus 로고
    • Down-regulation of 8-oxoguanine DNA glycosylase 1 expression in the airway epithelium ameliorates allergic lung inflammation
    • A. Bacsi, L. Aguilera-Aguirre, B. Szczesny, Z. Radak, T.K. Hazra, S. Sur, X. Ba, and I. Boldogh Down-regulation of 8-oxoguanine DNA glycosylase 1 expression in the airway epithelium ameliorates allergic lung inflammation DNA Repair (Amsterdam) 12 2013 18 26
    • (2013) DNA Repair (Amsterdam) , vol.12 , pp. 18-26
    • Bacsi, A.1    Aguilera-Aguirre, L.2    Szczesny, B.3    Radak, Z.4    Hazra, T.K.5    Sur, S.6    Ba, X.7    Boldogh, I.8
  • 51
    • 34249289745 scopus 로고    scopus 로고
    • TNF-alpha-induced NF-kappaB/RelA Ser(276) phosphorylation and enhanceosome formation is mediated by an ROS-dependent PKAc pathway
    • M. Jamaluddin, S. Wang, I. Boldogh, B. Tian, and A.R. Brasier TNF-alpha-induced NF-kappaB/RelA Ser(276) phosphorylation and enhanceosome formation is mediated by an ROS-dependent PKAc pathway Cell. Signalling 19 2007 1419 1433
    • (2007) Cell. Signalling , vol.19 , pp. 1419-1433
    • Jamaluddin, M.1    Wang, S.2    Boldogh, I.3    Tian, B.4    Brasier, A.R.5
  • 52
    • 84910643436 scopus 로고    scopus 로고
    • Systems biology approaches to understanding epithelial mesenchymal transition (EMT) in mucosal remodeling and signaling in asthma
    • T. Ijaz, K. Pazdrak, M. Kalita, R. Konig, S. Choudhary, B. Tian, I. Boldogh, and A.R. Brasier Systems biology approaches to understanding epithelial mesenchymal transition (EMT) in mucosal remodeling and signaling in asthma World Allergy Organ. J. 7 2014 13
    • (2014) World Allergy Organ. J. , vol.7 , pp. 13
    • Ijaz, T.1    Pazdrak, K.2    Kalita, M.3    Konig, R.4    Choudhary, S.5    Tian, B.6    Boldogh, I.7    Brasier, A.R.8
  • 53
    • 44349176408 scopus 로고    scopus 로고
    • RelA Ser276 phosphorylation is required for activation of a subset of NF-kappaB-dependent genes by recruiting cyclin-dependent kinase 9/cyclin T1 complexes
    • D.E. Nowak, B. Tian, M. Jamaluddin, I. Boldogh, L.A. Vergara, S. Choudhary, and A.R. Brasier RelA Ser276 phosphorylation is required for activation of a subset of NF-kappaB-dependent genes by recruiting cyclin-dependent kinase 9/cyclin T1 complexes Mol. Cell. Biol. 28 2008 3623 3638
    • (2008) Mol. Cell. Biol. , vol.28 , pp. 3623-3638
    • Nowak, D.E.1    Tian, B.2    Jamaluddin, M.3    Boldogh, I.4    Vergara, L.A.5    Choudhary, S.6    Brasier, A.R.7
  • 54
    • 84896713477 scopus 로고    scopus 로고
    • Chromatin regulators of genomic imprinting
    • J.R. Weaver, and M.S. Bartolomei Chromatin regulators of genomic imprinting Biochim. Biophys. Acta 1839 2014 169 177
    • (2014) Biochim. Biophys. Acta , vol.1839 , pp. 169-177
    • Weaver, J.R.1    Bartolomei, M.S.2
  • 55
    • 84892363964 scopus 로고    scopus 로고
    • Histone deacetylases and their inhibitors: New implications for asthma and chronic respiratory conditions
    • S.G. Royce, and T.C. Karagiannis Histone deacetylases and their inhibitors: new implications for asthma and chronic respiratory conditions Curr. Opin. Allergy Clin. Immunol. 14 2014 44 48
    • (2014) Curr. Opin. Allergy Clin. Immunol. , vol.14 , pp. 44-48
    • Royce, S.G.1    Karagiannis, T.C.2
  • 56
    • 80054757007 scopus 로고    scopus 로고
    • Analysis of epithelial barrier integrity in polarized lung epithelial cells
    • M. Strengert, and U.G. Knaus Analysis of epithelial barrier integrity in polarized lung epithelial cells Methods Mol. Biol. 763 2011 195 206
    • (2011) Methods Mol. Biol. , vol.763 , pp. 195-206
    • Strengert, M.1    Knaus, U.G.2
  • 58
    • 79955445335 scopus 로고    scopus 로고
    • Bronchial epithelium-derived IL-8 and RANTES increased bronchial smooth muscle cell migration and proliferation by Kruppel-like factor 5 in areca nut-mediated airway remodeling
    • P.L. Kuo, Y.L. Hsu, M.S. Huang, S.L. Chiang, and Y.C. Ko Bronchial epithelium-derived IL-8 and RANTES increased bronchial smooth muscle cell migration and proliferation by Kruppel-like factor 5 in areca nut-mediated airway remodeling Toxicol. Sci. 121 2011 177 190
    • (2011) Toxicol. Sci. , vol.121 , pp. 177-190
    • Kuo, P.L.1    Hsu, Y.L.2    Huang, M.S.3    Chiang, S.L.4    Ko, Y.C.5


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