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Volumn 65, Issue 4, 2006, Pages 1036-1040

The crystal structure of XC847 from Xanthomonas campestris: A 3′-5′ oligoribonuclease of DnaQ fold family with a novel opposingly shifted helix

Author keywords

3 5 oligoribonuclease; DEDDh; Orn; Structural genomics; X ray diffraction; Xantliomonas campestris

Indexed keywords

3',5' OLIGORIBONUCLEASE; BACTERIAL PROTEIN; PROTEIN DNAQ; PROTEIN XC847; RIBONUCLEASE; UNCLASSIFIED DRUG;

EID: 33751090084     PISSN: 08873585     EISSN: 10970134     Source Type: Journal    
DOI: 10.1002/prot.21148     Document Type: Article
Times cited : (21)

References (18)
  • 1
    • 0033551137 scopus 로고    scopus 로고
    • Oligoribonuclease is an essential component of the mRNA decay pathway
    • Ghosh S, Deutscher MP. Oligoribonuclease is an essential component of the mRNA decay pathway. Proc Natl Acad Sci USA 1999;96:4372-4377.
    • (1999) Proc Natl Acad Sci USA , vol.96 , pp. 4372-4377
    • Ghosh, S.1    Deutscher, M.P.2
  • 2
    • 0036808553 scopus 로고    scopus 로고
    • mRNA stability and the control of gene expression: Implications for human disease
    • Hollams EM, Giles KM, Thomson AM, Leedman PJ. mRNA stability and the control of gene expression: implications for human disease. Neurochem Res 2002;27:957-980.
    • (2002) Neurochem Res , vol.27 , pp. 957-980
    • Hollams, E.M.1    Giles, K.M.2    Thomson, A.M.3    Leedman, P.J.4
  • 3
    • 0035283033 scopus 로고    scopus 로고
    • Exoribonuclease superfamilies: Structural analysis and phylogenetic distribution
    • Zuo Y, Deutscher MP. Exoribonuclease superfamilies: structural analysis and phylogenetic distribution. Nucleic Acids Res 2001;29:1017-1026.
    • (2001) Nucleic Acids Res , vol.29 , pp. 1017-1026
    • Zuo, Y.1    Deutscher, M.P.2
  • 4
    • 0029046231 scopus 로고
    • Oligoribonuclease is distinct from the other known exoribonucleases of Escherichia coli
    • Yu D, Deutscher MP. Oligoribonuclease is distinct from the other known exoribonucleases of Escherichia coli. J Biol Chem 1995;177:4137-4139.
    • (1995) J Biol Chem , vol.177 , pp. 4137-4139
    • Yu, D.1    Deutscher, M.P.2
  • 6
    • 7544228191 scopus 로고    scopus 로고
    • Crystal structure of human ISG20, an interferon-induced antiviral ribonuclease
    • Horio T, Murai M, Inoue T, Hamasaki T, Tanaka T, Ohgi T. Crystal structure of human ISG20, an interferon-induced antiviral ribonuclease. FEBS Lett 2004;577:111-116.
    • (2004) FEBS Lett , vol.577 , pp. 111-116
    • Horio, T.1    Murai, M.2    Inoue, T.3    Hamasaki, T.4    Tanaka, T.5    Ohgi, T.6
  • 7
    • 0036229246 scopus 로고    scopus 로고
    • Structural basis for proofreading during replication of the Escherichia coli chromosome
    • Hamdan S, Carr PD, Brown SE, Ollis DL, Dixon NE. Structural basis for proofreading during replication of the Escherichia coli chromosome. Structure 2002;10:535-546.
    • (2002) Structure , vol.10 , pp. 535-546
    • Hamdan, S.1    Carr, P.D.2    Brown, S.E.3    Ollis, D.L.4    Dixon, N.E.5
  • 8
    • 0033664281 scopus 로고    scopus 로고
    • Structure of Escherichia coli exonuclease I suggests how processivity is achieved
    • Breyer WA, Matthews BW. Structure of Escherichia coli exonuclease I suggests how processivity is achieved. Nat Struct Biol 2000;7:1125-1128.
    • (2000) Nat Struct Biol , vol.7 , pp. 1125-1128
    • Breyer, W.A.1    Matthews, B.W.2
  • 9
    • 0345832225 scopus 로고    scopus 로고
    • X-ray structure and activity of the yeast Pop2 protein: A nuclease subunit of the mRNA deadenylase complex
    • Thore S, Mauxion F, Seraphin B, Suck D. X-ray structure and activity of the yeast Pop2 protein: a nuclease subunit of the mRNA deadenylase complex. EMBO Rep 2003;4:1150-1155.
    • (2003) EMBO Rep , vol.4 , pp. 1150-1155
    • Thore, S.1    Mauxion, F.2    Seraphin, B.3    Suck, D.4
  • 10
    • 0025085655 scopus 로고
    • Ligation-independent cloning of PCR products (LIC-PCR)
    • Aslanidis C, de Jong PJ. Ligation-independent cloning of PCR products (LIC-PCR). Nucleic Acids Res 1990;18:6069-6074.
    • (1990) Nucleic Acids Res , vol.18 , pp. 6069-6074
    • Aslanidis, C.1    De Jong, P.J.2
  • 11
    • 33744465811 scopus 로고    scopus 로고
    • The cloning, purification, crystallization, and preliminary X-ray crystallographic analysis of XC847, a 3′-5′ oligoribonuclease from Xanthomonas campestris
    • Wu Y-Y, Chin K-H, Chou C-C, Lee C-C, Shr H-L, Lyu P-C, Wang AH-J, Chou S-H. The cloning, purification, crystallization, and preliminary X-ray crystallographic analysis of XC847, a 3′-5′ oligoribonuclease from Xanthomonas campestris. Acta Crystallogr F 2005;61:902-905.
    • (2005) Acta Crystallogr F , vol.61 , pp. 902-905
    • Wu, Y.-Y.1    Chin, K.-H.2    Chou, C.-C.3    Lee, C.-C.4    Shr, H.-L.5    Lyu, P.-C.6    Wang, A.H.-J.7    Chou, S.-H.8
  • 12
    • 84920325457 scopus 로고
    • AMoRe: An automated package for molecular replacement
    • Navaza G. AMoRe: an automated package for molecular replacement. Acta Crystallogr A 1994;50:157-163.
    • (1994) Acta Crystallogr A , vol.50 , pp. 157-163
    • Navaza, G.1
  • 14
    • 0032790081 scopus 로고    scopus 로고
    • XtalView/Xfit - A versatile program for manipulating atomic coordinates and electron density
    • McRee DE. XtalView/Xfit-a versatile program for manipulating atomic coordinates and electron density. J Struct Biol 1999;125:156-165.
    • (1999) J Struct Biol , vol.125 , pp. 156-165
    • McRee, D.E.1
  • 15
    • 0031473847 scopus 로고    scopus 로고
    • SWISS-MODEL and the Swiss-PdbViewer: An environment for comparative protein modeling
    • Guex N, Peitsch MC. SWISS-MODEL and the Swiss-PdbViewer: an environment for comparative protein modeling. Electrophoresis 1997;18:2714-2723.
    • (1997) Electrophoresis , vol.18 , pp. 2714-2723
    • Guex, N.1    Peitsch, M.C.2
  • 16
    • 0028871926 scopus 로고
    • Dali: A network tool for protein structure comparison
    • Holm L, Sander C. Dali: a network tool for protein structure comparison. Trends Biochem Sci 1995;20:478-480.
    • (1995) Trends Biochem Sci , vol.20 , pp. 478-480
    • Holm, L.1    Sander, C.2
  • 17
    • 0033581011 scopus 로고    scopus 로고
    • DNA polymerases: Structural diversity and common mechanisms
    • Steitz TA. DNA polymerases: structural diversity and common mechanisms. J Biol Chem 1999;274:17395-17398.
    • (1999) J Biol Chem , vol.274 , pp. 17395-17398
    • Steitz, T.A.1
  • 18
    • 0016711596 scopus 로고
    • A novel oligoribonuclease of Escherichia coli. II. Mechanism of action
    • Datta AK, Niyogi SK. A novel oligoribonuclease of Escherichia coli. II. Mechanism of action. J Biol Chem 1975;250:7313-7319.
    • (1975) J Biol Chem , vol.250 , pp. 7313-7319
    • Datta, A.K.1    Niyogi, S.K.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.