-
1
-
-
84875490185
-
Cancer genome landscapes
-
Vogelstein, B. et al. Cancer genome landscapes. Science 339, 1546-1558 (2013).
-
(2013)
Science
, vol.339
, pp. 1546-1558
-
-
Vogelstein, B.1
-
2
-
-
78049398107
-
Distant metastasis occurs late during the genetic evolution of pancreatic cancer
-
Yachida, S. et al. Distant metastasis occurs late during the genetic evolution of pancreatic cancer. Nature 467, 1114-1117 (2010).
-
(2010)
Nature
, vol.467
, pp. 1114-1117
-
-
Yachida, S.1
-
3
-
-
84874598318
-
Intratumor heterogeneity in human glioblastoma reflects cancer evolutionary dynamics
-
Sottoriva, A. et al. Intratumor heterogeneity in human glioblastoma reflects cancer evolutionary dynamics. Proc. Natl Acad. Sci. USA 110, 4009-4014 (2013).
-
(2013)
Proc. Natl Acad. Sci. USA
, vol.110
, pp. 4009-4014
-
-
Sottoriva, A.1
-
4
-
-
79953766940
-
Tumour evolution inferred by single-cell sequencing
-
Navin, N. et al. Tumour evolution inferred by single-cell sequencing. Nature 472, 90-94 (2011).
-
(2011)
Nature
, vol.472
, pp. 90-94
-
-
Navin, N.1
-
5
-
-
84863393080
-
Intratumor heterogeneity and branched evolution revealed by multiregion sequencing
-
Gerlinger, M. et al. Intratumor heterogeneity and branched evolution revealed by multiregion sequencing. N. Engl. J. Med. 366, 883-892 (2012).
-
(2012)
N. Engl. J. Med.
, vol.366
, pp. 883-892
-
-
Gerlinger, M.1
-
6
-
-
0141988694
-
An evolutionarymodel of carcinogenesis
-
Gatenby, R. A.Vincent, T. L. An evolutionarymodel of carcinogenesis. Cancer Res. 63, 6212-6220 (2003).
-
(2003)
Cancer Res.
, vol.63
, pp. 6212-6220
-
-
Gatenby, R.A.1
Vincent, T.L.2
-
7
-
-
34247267072
-
Mathematical modeling of cell population dynamics in the colonic crypt and in colorectal cancer
-
Johnston, M. D., Edwards, C. M., Bodmer, W. F., Maini, P. K., Chapman, S. J. Mathematical modeling of cell population dynamics in the colonic crypt and in colorectal cancer. Proc. Natl Acad. Sci. USA 104, 4008-4013 (2007).
-
(2007)
Proc. Natl Acad. Sci. USA
, vol.104
, pp. 4008-4013
-
-
Johnston, M.D.1
Edwards, C.M.2
Bodmer, W.F.3
Maini, P.K.4
Chapman, S.J.5
-
8
-
-
78249261016
-
Accumulation of driver and passenger mutations during tumor progression
-
Bozic, I. et al. Accumulation of driver and passenger mutations during tumor progression. Proc. Natl Acad. Sci. USA 107, 18545-18550 (2010).
-
(2010)
Proc. Natl Acad. Sci. USA
, vol.107
, pp. 18545-18550
-
-
Bozic, I.1
-
9
-
-
36949025507
-
Genetic progression and the waiting time to cancer
-
Beerenwinkel, N. et al. Genetic progression and the waiting time to cancer. PLOS Comput. Biol. 3, e225 (2007).
-
(2007)
PLOS Comput. Biol.
, vol.3
, pp. e225
-
-
Beerenwinkel, N.1
-
10
-
-
72549097003
-
Evolution of resistance and progression to disease during clonal expansion of cancer
-
Durrett, R., Moseley, S. Evolution of resistance and progression to disease during clonal expansion of cancer. Theor. Popul. Biol. 77, 42-48 (2010).
-
(2010)
Theor. Popul. Biol.
, vol.77
, pp. 42-48
-
-
Durrett, R.1
Moseley, S.2
-
11
-
-
0036792092
-
Metapopulation dynamics and spatial heterogeneity in cancer
-
González-Garcia, I., Sole, R. V., Costa, J. Metapopulation dynamics and spatial heterogeneity in cancer. Proc. Natl Acad. Sci. USA 99, 13085-13089 (2002).
-
(2002)
Proc. Natl Acad. Sci. USA
, vol.99
, pp. 13085-13089
-
-
González-Garcia, I.1
Sole, R.V.2
Costa, J.3
-
12
-
-
77950927779
-
Selection in spatial stochastic models of cancer: Migration as a key modulator of fitness
-
Thalhauser, C. J., Lowengrub, J. S., Stupack, D., Komarova, N. L. Selection in spatial stochastic models of cancer: migration as a key modulator of fitness. Biol. Direct 5, 21 (2010).
-
(2010)
Biol. Direct
, vol.5
, pp. 21
-
-
Thalhauser, C.J.1
Lowengrub, J.S.2
Stupack, D.3
Komarova, N.L.4
-
13
-
-
83655197912
-
Spatial structure increases the waiting time for cancer
-
Martens, E. A., Kostadinov, R., Maley, C. C., Hallatschek, O. Spatial structure increases the waiting time for cancer. New J. Phys. 13, 115014 (2011).
-
(2011)
New J. Phys.
, vol.13
, pp. 115014
-
-
Martens, E.A.1
Kostadinov, R.2
Maley, C.C.3
Hallatschek, O.4
-
14
-
-
33751217466
-
Tumor morphology and phenotypic evolution driven by selective pressure from the microenvironment
-
Anderson, A. R. A., Weaver, A. M., Cummings, P. T., Quaranta, V. Tumor morphology and phenotypic evolution driven by selective pressure from the microenvironment. Cell 127, 905-915 (2006).
-
(2006)
Cell
, vol.127
, pp. 905-915
-
-
Anderson, A.R.A.1
Weaver, A.M.2
Cummings, P.T.3
Quaranta, V.4
-
15
-
-
35348824187
-
Ahybridmodel for tumor spheroid growth in vitro I: Theoretical development and early results
-
Kim, Y.,Magdalena, A.S.Othmer, H. G.Ahybridmodel for tumor spheroid growth in vitro I: theoretical development and early results.Math.ModelsMethods Appl. Sci. 17, 1773-1798 (2007).
-
(2007)
Math. Models Methods Appl. Sci.
, vol.17
, pp. 1773-1798
-
-
Kim, Y.1
Magdalena, A.S.2
Othmer, H.G.3
-
16
-
-
33745918670
-
Mathematical modeling of dynamic adaptive tumour-induced angiogenesis: Clinical implications and therapeutic targeting strategies
-
McDougall, S. R., Anderson, A. R., Chaplain, M. A. Mathematical modeling of dynamic adaptive tumour-induced angiogenesis: clinical implications and therapeutic targeting strategies. J. Theor. Biol. 241, 564-589 (2006).
-
(2006)
J. Theor. Biol.
, vol.241
, pp. 564-589
-
-
McDougall, S.R.1
Anderson, A.R.2
Chaplain, M.A.3
-
17
-
-
84888345632
-
Modeling tumor-associated edema in gliomas during anti-angiogenic therapy and its impact on imageable tumor
-
Hawkins-Daarud, A., Rockne, R. C., Anderson, A. R. A., Swanson, K. R. Modeling tumor-associated edema in gliomas during anti-angiogenic therapy and its impact on imageable tumor. Front. Oncol. 3, 66 (2013).
-
(2013)
Front. Oncol.
, vol.3
, pp. 66
-
-
Hawkins-Daarud, A.1
Rockne, R.C.2
Anderson, A.R.A.3
Swanson, K.R.4
-
18
-
-
79961023271
-
Genome-scale epigenetic reprogramming during epithelial-to-mesenchymal transition
-
McDonald,O.G.,Wu, H., Timp,W., Doi, A.Feinberg, A. P.Genome-scale epigenetic reprogramming during epithelial-to-mesenchymal transition. Nature Struct. Mol. Biol. 18, 867-874 (2011).
-
(2011)
Nature Struct. Mol. Biol.
, vol.18
, pp. 867-874
-
-
McDonald, O.G.1
Wu, H.2
Timp, W.3
Doi, A.4
Feinberg, A.P.5
-
19
-
-
22144443475
-
Drug resistance in cancer: Principles of emergence and prevention
-
Komarova, N. L., Wodarz, D. Drug resistance in cancer: principles of emergence and prevention. Proc. Natl Acad. Sci. USA 102, 9714-9719 (2005).
-
(2005)
Proc. Natl Acad. Sci. USA
, vol.102
, pp. 9714-9719
-
-
Komarova, N.L.1
Wodarz, D.2
-
20
-
-
84861904282
-
Dynamics of targeted cancer therapy
-
Bozic, I., Allen, B., Nowak, M. A. Dynamics of targeted cancer therapy. TrendsMol. Med. 18, 311-316 (2012).
-
(2012)
TrendsMol. Med.
, vol.18
, pp. 311-316
-
-
Bozic, I.1
Allen, B.2
Nowak, M.A.3
-
21
-
-
84909606346
-
Timing and heterogeneity of mutations associated with drug resistance in metastatic cancers
-
Bozic, I., Nowak, M. A. Timing and heterogeneity of mutations associated with drug resistance in metastatic cancers. Proc. Natl Acad. Sci. USA 111, 15964-15968 (2014).
-
(2014)
Proc. Natl Acad. Sci. USA
, vol.111
, pp. 15964-15968
-
-
Bozic, I.1
Nowak, M.A.2
-
22
-
-
73649102105
-
Preexistence and clonal selection of MET amplification in EGFR mutant NSCLC
-
Turke, A. B. et al. Preexistence and clonal selection of MET amplification in EGFR mutant NSCLC. Cancer Cell 17, 77-88 (2010).
-
(2010)
Cancer Cell
, vol.17
, pp. 77-88
-
-
Turke, A.B.1
-
23
-
-
84904705356
-
Spatial interactions and cooperation can change the speed of evolution of complex phenotypes
-
Komarova, N. L. Spatial interactions and cooperation can change the speed of evolution of complex phenotypes. Proc. Natl Acad. Sci. USA 111, 10789-10795 (2014).
-
(2014)
Proc. Natl Acad. Sci. USA
, vol.111
, pp. 10789-10795
-
-
Komarova, N.L.1
-
24
-
-
77955015464
-
AACR Centennial Series: The biology of cancer metastasis: Historical perspective
-
Talmadge, J. E., Fidler, I. J. AACR Centennial Series: the biology of cancer metastasis: historical perspective. Cancer Res. 70, 5649-5669 (2010).
-
(2010)
Cancer Res.
, vol.70
, pp. 5649-5669
-
-
Talmadge, J.E.1
Fidler, I.J.2
-
25
-
-
84901852284
-
Differentiation imbalance in single oesophageal progenitor cells causes clonal immortalization and field change
-
Alcolea, M.P. et al. Differentiation imbalance in single oesophageal progenitor cells causes clonal immortalization and field change. Nature Cell Biol. 16, 615-622 (2014).
-
(2014)
Nature Cell Biol.
, vol.16
, pp. 615-622
-
-
Alcolea, M.P.1
-
26
-
-
79953748864
-
RGB marking facilitatesmulticolor clonal cell tracking
-
Weber, K. et al. RGB marking facilitatesmulticolor clonal cell tracking. Nature Med. 17, 504-509 (2011).
-
(2011)
Nature Med.
, vol.17
, pp. 504-509
-
-
Weber, K.1
-
27
-
-
84892602255
-
Physical biology in cancer. 5. the rocky road of metastasis: The role of cytoskeletal mechanics in cell migratory responseto3Dmatrixtopography
-
Bordeleau, F., Alcoser, T. A., Reinhart-King, C. A. Physical biology in cancer. 5. The rocky road of metastasis: the role of cytoskeletal mechanics in cell migratory responseto3Dmatrixtopography. Am. J.Physiol.CellPhysiol.306,C110-C120(2014).
-
(2014)
Am. J. Physiol. Cell Physiol.
, vol.306
, pp. C110-C120
-
-
Bordeleau, F.1
Alcoser, T.A.2
Reinhart-King, C.A.3
-
28
-
-
84902455455
-
The on-off relationship of Rho and Rac during integrin-mediated adhesion and cell migration
-
Lawson, C. D., Burridge, K. The on-off relationship of Rho and Rac during integrin-mediated adhesion and cell migration. Small GTPases 5, e27958 (2014).
-
(2014)
Small GTPases
, vol.5
, pp. e27958
-
-
Lawson, C.D.1
Burridge, K.2
-
29
-
-
84888287469
-
Gene of the month: E-cadherin (CDH1)
-
Gall, T. M. H., Frampton, A. E. Gene of the month: E-cadherin (CDH1). J. Clin. Pathol. 66, 928-932 (2013).
-
(2013)
J. Clin. Pathol.
, vol.66
, pp. 928-932
-
-
Gall, T.M.H.1
Frampton, A.E.2
-
30
-
-
38949178861
-
Absence of E-cadherin expression distinguishes noncohesive from cohesive pancreatic cancer
-
Winter, J. M. et al. Absence of E-cadherin expression distinguishes noncohesive from cohesive pancreatic cancer. Clin. Cancer Res. 14, 412-418 (2008).
-
(2008)
Clin. Cancer Res.
, vol.14
, pp. 412-418
-
-
Winter, J.M.1
-
31
-
-
84884354905
-
Tumor growth dynamics: Insights into somatic evolutionary processes
-
Rodriguez-Brenes, I. A., Komarova, N. L., Wodarz, D. Tumor growth dynamics: insights into somatic evolutionary processes. Trends Ecol. Evol. 28, 597-604 (2013).
-
(2013)
Trends Ecol. Evol.
, vol.28
, pp. 597-604
-
-
Rodriguez-Brenes, I.A.1
Komarova, N.L.2
Wodarz, D.3
-
32
-
-
25144494216
-
A hybrid mathematical model of solid tumour invasion: The importance of cell adhesion
-
Anderson, A. R. A. A hybrid mathematical model of solid tumour invasion: the importance of cell adhesion. Math. Med. Biol. 22, 163-186 (2005).
-
(2005)
Math. Med. Biol.
, vol.22
, pp. 163-186
-
-
Anderson, A.R.A.1
-
33
-
-
33748696982
-
Spatial stochastic models for cancer initiation and progression
-
Komarova, N. L. Spatial stochastic models for cancer initiation and progression. Bull. Math. Biol. 68, 1573-1599 (2006).
-
(2006)
Bull. Math. Biol.
, vol.68
, pp. 1573-1599
-
-
Komarova, N.L.1
-
34
-
-
84937759450
-
Survival probabilities at spherical frontiers
-
Lavrentovich, M. O., Nelson, D. R. Survival probabilities at spherical frontiers. Theor. Popul. Biol. 102, 26-39 (2015).
-
(2015)
Theor. Popul. Biol.
, vol.102
, pp. 26-39
-
-
Lavrentovich, M.O.1
Nelson, D.R.2
-
35
-
-
84877012648
-
Spatial stochasticmodels of cancer: Fitness, migration, invasion
-
Komarova, N. L. Spatial stochasticmodels of cancer: fitness, migration, invasion. Math. Biosci. Eng. 10, 761-775 (2013).
-
(2013)
Math. Biosci. Eng.
, vol.10
, pp. 761-775
-
-
Komarova, N.L.1
-
36
-
-
84894286980
-
Spatial invasion dynamics on random and unstructured meshes: Implications for heterogeneous tumor populations
-
Manem, V. S. K., Kohandel, M., Komarova, N. L., Sivaloganathan, S. Spatial invasion dynamics on random and unstructured meshes: implications for heterogeneous tumor populations. J. Theor. Biol. 349, 66-73 (2014).
-
(2014)
J. Theor. Biol.
, vol.349
, pp. 66-73
-
-
Manem, V.S.K.1
Kohandel, M.2
Komarova, N.L.3
Sivaloganathan, S.4
-
37
-
-
84959252466
-
Spatial Moran models II: Cancer initiation in spatially structured tissue
-
Durrett, R., Foo, J., Leder, K. Spatial Moran models, II: cancer initiation in spatially structured tissue. J. Math. Biol. http://dx.doi.org/10.1007/s00285-015-0912-1 (2015).
-
(2015)
J. Math. Biol.
-
-
Durrett, R.1
Foo, J.2
Leder, K.3
-
38
-
-
84864044363
-
The impact of phenotypic switching on glioblastoma growth and invasion
-
Gerlee, P., Nelander, S. The impact of phenotypic switching on glioblastoma growth and invasion. PLOS Comput. Biol. 8, e1002556 (2012).
-
(2012)
PLOS Comput. Biol.
, vol.8
, pp. e1002556
-
-
Gerlee, P.1
Nelander, S.2
-
39
-
-
0036792092
-
Metapopulation dynamics and spatial heterogeneity in cancer
-
González-Garc?á, I., Solé, R. V., Costa, J. Metapopulation dynamics and spatial heterogeneity in cancer. Proc. Natl Acad. Sci. USA 99, 13085-13089 (2002).
-
(2002)
Proc. Natl Acad. Sci. USA
, vol.99
, pp. 13085-13089
-
-
González-Garcá, I.1
-
40
-
-
84860198019
-
Model for in vivo progression of tumors based on co-evolving cell population and vasculature
-
Sehyo,C.C. et al.Model for in vivo progression of tumors based on co-evolving cell population and vasculature. Sci. Rep. 1, 31 (2011).
-
(2011)
Sci. Rep.
, vol.1
, pp. 31
-
-
Sehyo, C.C.1
-
41
-
-
79951902304
-
Toward an Ising model of cancer and beyond
-
Torquato, S. Toward an Ising model of cancer and beyond. Phys. Biol. 8, 015017 (2011).
-
(2011)
Phys. Biol.
, vol.8
, pp. 015017
-
-
Torquato, S.1
-
42
-
-
84872760999
-
The effect of one additional driver mutation on tumor progression
-
Reiter, J. G., Bozic, I., Allen, B., Chatterjee, K., Nowak, M. A. The effect of one additional driver mutation on tumor progression. Evol. Appl. 6, 34-45 (2013).
-
(2013)
Evol. Appl.
, vol.6
, pp. 34-45
-
-
Reiter, J.G.1
Bozic, I.2
Allen, B.3
Chatterjee, K.4
Nowak, M.A.5
-
43
-
-
0034696767
-
Simulated brain tumor growth dynamics using a three-dimensional cellular automaton
-
Kansal, A. R., Torquato, S., Harsh,G. R., Chiocca, E. A.& Deisboeck, T. S. Simulated brain tumor growth dynamics using a three-dimensional cellular automaton. J. Theor. Biol. 203, 367-382 (2000).
-
(2000)
J. Theor. Biol.
, vol.203
, pp. 367-382
-
-
Kansal, A.R.1
Torquato, S.2
Harsh, G.R.3
Chiocca, E.A.4
Deisboeck, T.S.5
-
44
-
-
0034619684
-
Emergence of a subpopulation in a computational model of tumor growth
-
Kansal, A. R., Torquato, S., Chiocca, E. A., Deisboeck, T. S. Emergence of a subpopulation in a computational model of tumor growth. J. Theor. Biol. 207, 431-441 (2000).
-
(2000)
J. Theor. Biol.
, vol.207
, pp. 431-441
-
-
Kansal, A.R.1
Torquato, S.2
Chiocca, E.A.3
Deisboeck, T.S.4
-
45
-
-
84939614428
-
Spatial evolution of tumors with successive driver mutations
-
Antal, T., Krapivsky, P. L., Nowak, M. A. Spatial evolution of tumors with successive driver mutations. Phys. Rev. E 92, 022705 (2015).
-
(2015)
Phys. Rev. e
, vol.92
, pp. 022705
-
-
Antal, T.1
Krapivsky, P.L.2
Nowak, M.A.3
-
46
-
-
67349111353
-
Migration rules: Tumours are conglomerates of self-metastases
-
Enderling, H., Hlatky, L., Hahnfeldt, P. Migration rules: tumours are conglomerates of self-metastases. Br. J. Cancer 100, 1917-1925 (2009).
-
(2009)
Br. J. Cancer
, vol.100
, pp. 1917-1925
-
-
Enderling, H.1
Hlatky, L.2
Hahnfeldt, P.3
-
47
-
-
75149132546
-
Cancer stemcell tumormodel reveals invasivemorphology and increased phenotypical heterogeneity
-
Sottoriva, A. et al. Cancer stemcell tumormodel reveals invasivemorphology and increased phenotypical heterogeneity. Cancer Res. 70, 46-56 (2010).
-
(2010)
Cancer Res.
, vol.70
, pp. 6-56
-
-
Sottoriva, A.1
-
48
-
-
25844463997
-
Multicellular tumor spheroid in an off-lattice voronoi-delaunay cell model
-
Schaller, G., Meyer-Hermann, M. Multicellular tumor spheroid in an off-lattice voronoi-delaunay cell model. Phys. Rev. E 71, 051910 (2005).
-
(2005)
Phys. Rev. e
, vol.71
, pp. 051910
-
-
Schaller, G.1
Meyer-Hermann, M.2
-
49
-
-
66749089871
-
Comparing the growth kinetics of cell populations in two and three dimensions
-
Radszuweit, M., Block, M., Hengstler, J. G., Schö ll, E., Drasdo, D. Comparing the growth kinetics of cell populations in two and three dimensions. Phys. Rev. E 79, 051907 (2009).
-
(2009)
Phys. Rev. e
, vol.79
, pp. 051907
-
-
Radszuweit, M.1
Block, M.2
Hengstler, J.G.3
Schöll, E.4
Drasdo, D.5
-
50
-
-
84875495575
-
Interfacial properties in a discretemodel for tumor growth
-
Moglia, B., Guisoni, N.& Albano, E. V. Interfacial properties in a discretemodel for tumor growth. Phys. Rev. E 87, 032713 (2013).
-
(2013)
Phys. Rev. e
, vol.87
, pp. 032713
-
-
Moglia, B.1
Guisoni, N.2
Albano, E.V.3
-
51
-
-
84899887965
-
Multifocality and recurrence risk: A quantitative model of field cancerization
-
Foo, J., Leder, K., Ryser, M. Multifocality and recurrence risk: a quantitative model of field cancerization. J. Theor. Biol. 355, 170-184 (2014).
-
(2014)
J. Theor. Biol.
, vol.355
, pp. 170-184
-
-
Foo, J.1
Leder, K.2
Ryser, M.3
-
52
-
-
84926303212
-
Evolution andphenotypic selection of cancer stem cells
-
Poleszczuk, J.,Hahnfeldt,P.Enderling,H. Evolution andphenotypic selection of cancer stem cells. PLOS Comput. Biol. 11, e1004025 (2015).
-
(2015)
PLOS Comput. Biol.
, vol.11
, pp. e1004025
-
-
Poleszczuk, J.1
Hahnfeldt, P.2
Enderling, H.3
-
53
-
-
66149101375
-
A waiting time problem arising from the study of multi-stage carcinogenesis
-
Durrett, R., Schmidt, D., Schweinsberg, J. A waiting time problem arising from the study of multi-stage carcinogenesis. Ann. Appl. Probab. 19, 676-718 (2009).
-
(2009)
Ann. Appl. Probab.
, vol.19
, pp. 676-718
-
-
Durrett, R.1
Schmidt, D.2
Schweinsberg, J.3
-
54
-
-
5644258383
-
An ordinary differential equation model for the multistep transformation to cancer
-
Spencer, S. L., Berryman, M. J., Garc?á, J. A., Abbott, D. An ordinary differential equation model for the multistep transformation to cancer. J. Theor. Biol. 231, 515-524 (2004).
-
(2004)
J. Theor. Biol.
, vol.231
, pp. 515-524
-
-
Spencer, S.L.1
Berryman, M.J.2
Garcá, J.A.3
Abbott, D.4
-
55
-
-
84881377835
-
A hybrid model of tumor-stromal interactions in breast cancer
-
Kim, Y., Othmer, H. G. A hybrid model of tumor-stromal interactions in breast cancer. Bull. Math. Biol. 75, 1304-1350 (2013).
-
(2013)
Bull. Math. Biol.
, vol.75
, pp. 1304-1350
-
-
Kim, Y.1
Othmer, H.G.2
-
56
-
-
65349115288
-
Multi-scale modelling of cancer cell intravasation: The role of cadherins in metastasis
-
Ramis-Conde, I., Chaplain, M. A. J., Anderson, A. R. A., Drasdo, D. Multi-scale modelling of cancer cell intravasation: the role of cadherins in metastasis. Phys. Biol. 6, 016008 (2009).
-
(2009)
Phys. Biol.
, vol.6
, pp. 016008
-
-
Ramis-Conde, I.1
Chaplain, M.A.J.2
Anderson, A.R.A.3
Drasdo, D.4
-
57
-
-
84255170467
-
Quantifying the role of angiogenesis in malignant progression of gliomas: In silico modeling integrates imaging and histology
-
Swanson, K. R. et al. Quantifying the role of angiogenesis in malignant progression of gliomas: in silico modeling integrates imaging and histology. Cancer Res. 71, 7366-7375 (2011).
-
(2011)
Cancer Res.
, vol.71
, pp. 66-7375
-
-
Swanson, K.R.1
-
58
-
-
84899464897
-
Mechanical properties of growing melanocytic nevi and the progression to melanoma
-
Taloni, A. et al. Mechanical properties of growing melanocytic nevi and the progression to melanoma. PLoS ONE 9, e94229 (2014).
-
(2014)
PLoS ONE
, vol.9
, pp. e94229
-
-
Taloni, A.1
-
59
-
-
26944481103
-
A single-cell-based model of tumor growth in vitro: Monolayers and spheroids
-
Drasdo, D., Höhme, S. A single-cell-based model of tumor growth in vitro: monolayers and spheroids. Phys. Biol. 2, 133 (2005).
-
(2005)
Phys. Biol.
, vol.2
, pp. 133
-
-
Drasdo, D.1
Höhme, S.2
-
60
-
-
34249873259
-
On the role of physics in the growth and pattern formation of multi-cellular systems: What can we learn from individualcell based models?
-
Drasdo, D., Hoehme, S., Block, M. On the role of physics in the growth and pattern formation of multi-cellular systems: what can we learn from individualcell based models? J. Stat. Phys. 128, 287-345 (2007).
-
(2007)
J. Stat. Phys.
, vol.128
, pp. 287-345
-
-
Drasdo, D.1
Hoehme, S.2
Block, M.3
-
61
-
-
28444483647
-
A multiscale model for avascular tumor growth
-
Jiang, Y., Pjesivac-Grbovic, J., Cantrell, C., Freyer, J. P. A multiscale model for avascular tumor growth. Biophys. J. 89, 3884-3894 (2005).
-
(2005)
Biophys. J.
, vol.89
, pp. 3884-3894
-
-
Jiang, Y.1
Pjesivac-Grbovic, J.2
Cantrell, C.3
Freyer, J.P.4
-
62
-
-
84941231893
-
-
eds Family, F., Vicsek, T. World Scientific
-
Eden, M. in A Two-Dimensional Growth Process (eds Family, F., Vicsek, T.) 265-283 (World Scientific, 1961).
-
(1961)
A Two-Dimensional Growth Process
, pp. 265-283
-
-
Eden, M.1
-
64
-
-
0032436318
-
BacSim a simulator for individualbased modelling of bacterial colony growth
-
Kreft, J. U., Booth, G., Wimpenny, J. W. T. BacSim, a simulator for individualbased modelling of bacterial colony growth. Microbiology 144, 3275-3287 (1998).
-
(1998)
Microbiology
, vol.144
, pp. 3275-3287
-
-
Kreft, J.U.1
Booth, G.2
Wimpenny, J.W.T.3
-
65
-
-
80052631835
-
IDynoMiCS: Next-generation individual-based modelling of biofilms
-
Lardon, L. A. et al. iDynoMiCS: Next-generation individual-based modelling of biofilms. Environ. Microbiol. 13, 2416-2434 (2011).
-
(2011)
Environ. Microbiol.
, vol.13
, pp. 2416-2434
-
-
Lardon, L.A.1
-
66
-
-
41949139438
-
Comparative lesion sequencing provides insights into tumor evolution
-
Jones, S. et al. Comparative lesion sequencing provides insights into tumor evolution. Proc. Natl Acad. Sci. USA 105, 4283-4288 (2008).
-
(2008)
Proc. Natl Acad. Sci. USA
, vol.105
, pp. 4283-4288
-
-
Jones, S.1
-
67
-
-
18344378411
-
Prevalence of somatic alterations in the colorectal cancer cell genome
-
Wang, T. L. et al. Prevalence of somatic alterations in the colorectal cancer cell genome. Proc. Natl Acad. Sci. USA 99, 3076-3080 (2002).
-
(2002)
Proc. Natl Acad. Sci. USA
, vol.99
, pp. 3076-3080
-
-
Wang, T.L.1
-
68
-
-
84863000299
-
Themolecular evolution ofacquiredresistance to targetedEGFR blockade in colorectal cancers
-
Diaz, L. A. Jr et al. Themolecular evolution ofacquiredresistance to targetedEGFR blockade in colorectal cancers. Nature 486, 537-540 (2012).
-
(2012)
Nature
, vol.486
, pp. 537-540
-
-
Diaz, Jr.L.A.1
-
69
-
-
0018616459
-
Establishment of epidermal cell columns in mammalian skin: Computer simulation
-
Honda, H., Morita, T., Tanabe, A. Establishment of epidermal cell columns in mammalian skin: computer simulation. J. Theor. Biol. 81, 745-759 (1979).
-
(1979)
J. Theor. Biol.
, vol.81
, pp. 745-759
-
-
Honda, H.1
Morita, T.2
Tanabe, A.3
-
70
-
-
84857759429
-
Reproduction-time statistics and segregation patterns in growing populations
-
Ali, A., Somfai, E., Grosskinsky, S. Reproduction-time statistics and segregation patterns in growing populations. Phys. Rev. E 85, 021923 (2012).
-
(2012)
Phys. Rev. E
, vol.85
, pp. 021923
-
-
Ali, A.1
Somfai, E.2
Grosskinsky, S.3
-
71
-
-
85031877099
-
Data from: A quantitative test of population genetics using spatio-genetic patterns in bacterial colonies
-
Korolev, K. S., Xavier, J. B., Nelson, D. R., Foster, K. R. Data from: a quantitative test of population genetics using spatio-genetic patterns in bacterial colonies. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.3147q (2011).
-
(2011)
Dryad Digital Repository.
-
-
Korolev, K.S.1
Xavier, J.B.2
Nelson, D.R.3
Foster, K.R.4
-
72
-
-
84873110015
-
Newinsight intoKi67 expression at the invasive front in breast cancer
-
Gong, P.,Wang, Y., Liu,G., Zhang, J.Wang, Z.Newinsight intoKi67 expression at the invasive front in breast cancer. PLoS ONE 8, e54912 (2013).
-
(2013)
PLoS ONE
, vol.8
, pp. e54912
-
-
Gong, P.1
Wang, Y.2
Liu, G.3
Zhang, J.4
Wang, Z.5
-
73
-
-
84892924219
-
A single institution's 26-year experience with nonfunctional pancreatic neuroendocrine tumors: A validation of current staging systemsand a new prognostic nomogram
-
Ellison, T. A. et al. A single institution's 26-year experience with nonfunctional pancreatic neuroendocrine tumors: a validation of current staging systemsand a new prognostic nomogram. Ann. Surg. 259, 204-212 (2014).
-
(2014)
Ann. Surg.
, vol.259
, pp. 204-212
-
-
Ellison, T.A.1
-
74
-
-
41949139438
-
Comparative lesion sequencing provides insights into tumor evolution
-
Jones, S. et al. Comparative lesion sequencing provides insights into tumor evolution. Proc. Natl Acad. Sci. USA 105, 4283-4288 (2008).
-
(2008)
Proc. Natl Acad. Sci. USA
, vol.105
, pp. 4283-4288
-
-
Jones, S.1
-
75
-
-
84864085607
-
Clinically used breast cancer markers such as estrogen receptor, progesterone receptor, and human epidermal growth factor receptor 2 are unstable throughout tumor progression
-
Lindstrom, L. S. et al. Clinically used breast cancer markers such as estrogen receptor, progesterone receptor, and human epidermal growth factor receptor 2 are unstable throughout tumor progression. J. Clin. Oncol. 30, 2601-2608 (2012).
-
(2012)
J. Clin. Oncol.
, vol.30
, pp. 2601-2608
-
-
Lindstrom, L.S.1
-
76
-
-
84898732516
-
Tumor genetic analyses of patients with metastatic renal cell carcinoma and extended benefit from mTOR inhibitor therapy
-
Voss, M. H. et al. Tumor genetic analyses of patients with metastatic renal cell carcinoma and extended benefit from mTOR inhibitor therapy. Clin. Cancer Res. 20, 1955-1964 (2014).
-
(2014)
Clin. Cancer Res.
, vol.20
, pp. 1955-1964
-
-
Voss, M.H.1
-
77
-
-
84890116570
-
Long-term dynamics of adaptation in asexual populations
-
Wiser, M. J., Ribeck, N., Lenski, R. E. Long-term dynamics of adaptation in asexual populations. Science 342, 1364-1367 (2013).
-
(2013)
Science
, vol.342
, pp. 1364-1367
-
-
Wiser, M.J.1
Ribeck, N.2
Lenski, R.E.3
-
78
-
-
0030757227
-
Increased mRNA Levels of ERG16 CDR, and MDR1 correlate with increases in azole resistance in Candida albicans isolates from a patient infected with human immunodeficiency virus
-
White, T. C. Increased mRNA Levels of ERG16, CDR, and MDR1 correlate with increases in azole resistance in Candida albicans isolates from a patient infected with human immunodeficiency virus. Antimicrob. Agents Chemother. 41, 1482-1487 (1997).
-
(1997)
Antimicrob. Agents Chemother.
, vol.41
, pp. 1482-1487
-
-
White, T.C.1
-
79
-
-
84928254065
-
Clonal status of actionable driver events and the timing of mutational processes in cancer evolution
-
McGranahan, N. et al. Clonal status of actionable driver events and the timing of mutational processes in cancer evolution. Sci. Transl. Med. 7, 283 (2015).
-
(2015)
Sci. Transl. Med.
, vol.7
, pp. 283
-
-
McGranahan, N.1
-
80
-
-
78650462567
-
Fluidization of tissues by cell division and apoptosis
-
Ranft, J. et al. Fluidization of tissues by cell division and apoptosis. Proc.Natl Acad. Sci. USA 107, 20863-20868 (2010).
-
(2010)
Proc.Natl Acad. Sci. USA
, vol.107
, pp. 20863-20868
-
-
Ranft, J.1
-
81
-
-
84920616812
-
PGC-1a mediates mitochondrial biogenesis and oxidative phosphorylation in cancer cells to promote metastasis
-
LeBleu, V. S. et al. PGC-1a mediates mitochondrial biogenesis and oxidative phosphorylation in cancer cells to promote metastasis. Nature Cell Biol. 16, 992-1003 (2014).
-
(2014)
Nature Cell Biol.
, vol.16
, pp. 992-1003
-
-
LeBleu, V.S.1
-
82
-
-
84907342688
-
Circulating tumor cell clusters are oligoclonal precursors of breast cancer metastasis
-
Aceto, N. et al. Circulating tumor cell clusters are oligoclonal precursors of breast cancer metastasis. Cell 158, 1110-1122 (2014).
-
(2014)
Cell
, vol.158
, pp. 1110-1122
-
-
Aceto, N.1
-
83
-
-
84873377603
-
A multiphase model for three-dimensional tumor growth
-
Sciumè, G. et al. A multiphase model for three-dimensional tumor growth. New J. Phys. 15, 015005 (2013).
-
(2013)
New J. Phys.
, vol.15
, pp. 015005
-
-
Sciumè, G.1
-
84
-
-
84927178621
-
Physical influences of the extracellular environment oncell migration
-
Charras,G.Sahai, E.Physical influences of the extracellular environment oncell migration. Nature Rev. Mol. Cell Biol. 15, 813-824 (2014).
-
(2014)
Nature Rev. Mol. Cell Biol.
, vol.15
, pp. 813-824
-
-
Charras, G.1
Sahai, E.2
-
85
-
-
84863622489
-
Diversity of dynamics and morphologies of invasive solid tumors
-
Jiao, Y., Torquato, S. Diversity of dynamics and morphologies of invasive solid tumors. AIP Advances 2, 011003 (2012).
-
(2012)
AIP Advances
, vol.2
, pp. 011003
-
-
Jiao, Y.1
Torquato, S.2
-
86
-
-
11244250625
-
Modeling the effect of deregulated proliferation and apoptosis on the growth dynamics of epithelial cell populations in vitro
-
Galle, J., Loeffler, M., Drasdo, D. Modeling the effect of deregulated proliferation and apoptosis on the growth dynamics of epithelial cell populations in vitro. Biophys. J. 88, 62-75 (2005).
-
(2005)
Biophys. J.
, vol.88
, pp. 62-75
-
-
Galle, J.1
Loeffler, M.2
Drasdo, D.3
-
87
-
-
0029757195
-
Young's modulus measurements of soft tissues with application to elasticity imaging. Ultrasonics ferroelectrics and frequency control
-
Chen, E. J., Novakofski, J., Jenkins, W. K., O'Brien, W. D. Jr. Young's modulus measurements of soft tissues with application to elasticity imaging. Ultrasonics, ferroelectrics, and frequency control. IEEE Transactions 43, 191-194 (1996).
-
(1996)
IEEE Transactions
, vol.43
, pp. 191-194
-
-
Chen, E.J.1
Novakofski, J.2
Jenkins, W.K.3
O'Brien, Jr.W.D.4
-
88
-
-
0043246587
-
Measuring the elastic modulus of ex vivo small tissue samples
-
Samani, A., Bishop, J., Luginbuhl, C., Plewes, D. B. Measuring the elastic modulus of ex vivo small tissue samples. Phys. Med. Biol. 48, 2183 (2003).
-
(2003)
Phys. Med. Biol.
, vol.48
, pp. 2183
-
-
Samani, A.1
Bishop, J.2
Luginbuhl, C.3
Plewes, D.B.4
-
90
-
-
0033049359
-
Elasticity ofnormal and cancerous humanbladder cells studied by scanning force microscopy
-
Lekka,M. et al. Elasticity ofnormal and cancerous humanbladder cells studied by scanning force microscopy. Eur. Biophys. J. 28, 312-316 (1999).
-
(1999)
Eur. Biophys. J.
, vol.28
, pp. 312-316
-
-
Lekkam1
-
91
-
-
84869132722
-
Soft mattermodels of developing tissues and tumors
-
Gonzalez-Rodriguez, D., Guevorkian, K., Douezan, S., Brochard-Wyart, F. Soft mattermodels of developing tissues and tumors. Science 338, 910-917 (2012).
-
(2012)
Science
, vol.338
, pp. 910-917
-
-
Gonzalez-Rodriguez, D.1
Guevorkian, K.2
Douezan, S.3
Brochard-Wyart, F.4
-
92
-
-
84873520822
-
Fine tuning of tissues' viscosity and surface tension through contractility suggests a new role for a-catenin
-
Stirbat, T. V. et al. Fine tuning of tissues' viscosity and surface tension through contractility suggests a new role for a-catenin. PLoS ONE 8, e52554 (2013).
-
(2013)
PLoS ONE
, vol.8
, pp. e52554
-
-
Stirbat, T.V.1
-
93
-
-
0034180349
-
Buckling instabilities of one-layered growing tissues
-
Drasdo, D. Buckling instabilities of one-layered growing tissues. Phys. Rev. Lett. 84, 4244-4247 (2000).
-
(2000)
Phys. Rev. Lett.
, vol.84
, pp. 4244-4247
-
-
Drasdo, D.1
-
94
-
-
79954526299
-
Undulation instability of epithelial tissues
-
Basan, M., Joanny, J.-F., Prost, J., Risler, T. Undulation instability of epithelial tissues. Phys. Rev. Lett. 106, 158101 (2011).
-
(2011)
Phys. Rev. Lett.
, vol.106
, pp. 158101
-
-
Basan, M.1
Joanny, J.-F.2
Prost, J.3
Risler, T.4
-
95
-
-
84881483492
-
Evolutionary dynamics of cancer in response to targeted combination therapy
-
Bozic, I. et al. Evolutionary dynamics of cancer in response to targeted combination therapy. Elife 2, e00747 (2013).
-
(2013)
Elife
, vol.2
, pp. e00747
-
-
Bozic, I.1
-
96
-
-
84887478772
-
Combining two strategies to improve perfusion and drug delivery in solid tumors
-
Stylianopoulos, T., Jain, R. K. Combining two strategies to improve perfusion and drug delivery in solid tumors. Proc. Natl Acad. Sci. USA 110, 18632-18637 (2013).
-
(2013)
Proc. Natl Acad. Sci. USA
, vol.110
, pp. 18632-18637
-
-
Stylianopoulos, T.1
Jain, R.K.2
-
97
-
-
84905831182
-
Evolution of acquired resistance to anti-cancer therapy
-
Foo, J., Michor, F. Evolution of acquired resistance to anti-cancer therapy. J. Theor. Biol. 355, 10-20 (2014).
-
(2014)
J. Theor. Biol.
, vol.355
, pp. 10-20
-
-
Foo, J.1
Michor, F.2
-
98
-
-
0021143707
-
The genetic origin of drug resistance in neoplasms: Implications for systemic therapy
-
Goldie, J. H., Coldman, A. J. The genetic origin of drug resistance in neoplasms: implications for systemic therapy. Cancer Res. 44, 3643-3653 (1984).
-
(1984)
Cancer Res.
, vol.44
, pp. 3643-3653
-
-
Goldie, J.H.1
Coldman, A.J.2
-
99
-
-
0022871280
-
A stochastic model for the origin and treatment of tumors containing drug-resistant cells
-
Coldman, A. J., Goldie, J. H. A stochastic model for the origin and treatment of tumors containing drug-resistant cells. Bull. Math. Biol. 48, 279-292 (1986).
-
(1986)
Bull. Math. Biol.
, vol.48
, pp. 279-292
-
-
Coldman, A.J.1
Goldie, J.H.2
-
100
-
-
0020805347
-
A model for the resistance of tumor cells to cancer chemotherapeutic agents
-
Coldman, A. J., Goldie, J. H. A model for the resistance of tumor cells to cancer chemotherapeutic agents. Math. Biosci. 65, 291-307 (1983).
-
(1983)
Math. Biosci.
, vol.65
, pp. 291-307
-
-
Coldman, A.J.1
Goldie, J.H.2
-
101
-
-
84865208085
-
Mutational pathway determines whether drug gradients accelerate evolution of drug-resistant cells
-
Greulich, P., Waclaw, B., Allen, R. J. Mutational pathway determines whether drug gradients accelerate evolution of drug-resistant cells. Phys. Rev. Lett. 109, 088101 (2012).
-
(2012)
Phys. Rev. Lett.
, vol.109
, pp. 088101
-
-
Greulich, P.1
Waclaw, B.2
Allen, R.J.3
-
102
-
-
84859574722
-
Selective sweeps in growing microbial colonies
-
Korolev, K. S. et al. Selective sweeps in growing microbial colonies. Phys. Biol. 9, 026008 (2012).
-
(2012)
Phys. Biol.
, vol.9
, pp. 026008
-
-
Korolev, K.S.1
|