-
6
-
-
0347418195
-
-
A. G. Vitreschak, D. A. Rodionov, A. A. Mironov, and M. S. Gelfand, Trends Genet. 20, 44 (2004). 10.1016/j.tig.2003.11.008
-
(2004)
Trends Genet.
, vol.20
, pp. 44
-
-
Vitreschak, A.G.1
Rodionov, D.A.2
Mironov, A.A.3
Gelfand, M.S.4
-
7
-
-
0042320361
-
-
W. C. Winkler, A. Nahvi, N. Sudarsan, J. E. Barrick, and R. R. Breaker, Nat. Struct. Biol. 10, 701 (2003). 10.1038/nsb967
-
(2003)
Nat. Struct. Biol.
, vol.10
, pp. 701
-
-
Winkler, W.C.1
Nahvi, A.2
Sudarsan, N.3
Barrick, J.E.4
Breaker, R.R.5
-
9
-
-
18744396047
-
-
A. S. Mironov, I. Gusarov, R. Rafikov, L. E. Lopez, K. Shatalin, R. A. Kreneva, D. A. Perumov, and E. Nudler, Cell 111, 747 (2002). 10.1016/S0092-8674(02)01134-0
-
(2002)
Cell
, vol.111
, pp. 747
-
-
Mironov, A.S.1
Gusarov, I.2
Rafikov, R.3
Lopez, L.E.4
Shatalin, K.5
Kreneva, R.A.6
Perumov, D.A.7
Nudler, E.8
-
10
-
-
0038210214
-
-
M. Mandal, B. Boese, J. E. Barrick, W. C. Winkler, and R. R. Breaker, Cell 113, 577 (2003). 10.1016/S0092-8674(03)00391-X
-
(2003)
Cell
, vol.113
, pp. 577
-
-
Mandal, M.1
Boese, B.2
Barrick, J.E.3
Winkler, W.C.4
Breaker, R.R.5
-
12
-
-
71049194730
-
-
W. Huang, J. Kim, S. Jha, and F. Aboul-ela, Nucleic Acids Res. 37, 6528 (2009). 10.1093/nar/gkp664
-
(2009)
Nucleic Acids Res.
, vol.37
, pp. 6528
-
-
Huang, W.1
Kim, J.2
Jha, S.3
Aboul-Ela, F.4
-
14
-
-
84872543206
-
-
A. Serganov and E. Nudler, Cell 152, 17 (2013). 10.1016/j.cell.2012.12.024
-
(2013)
Cell
, vol.152
, pp. 17
-
-
Serganov, A.1
Nudler, E.2
-
18
-
-
80052973462
-
-
R. R. Breaker, Mol. Cell 43, 867 (2011). 10.1016/j.molcel.2011.08.024
-
(2011)
Mol. Cell
, vol.43
, pp. 867
-
-
Breaker, R.R.1
-
19
-
-
5044234799
-
-
M. Mandal, M. Lee, J. E. Barrick, Z. Weinberg, G. M. Emilsson, W. L. Ruzzo, and R. R. Breaker, Science 306, 275 (2004). 10.1126/science.1100829
-
(2004)
Science
, vol.306
, pp. 275
-
-
Mandal, M.1
Lee, M.2
Barrick, J.E.3
Weinberg, Z.4
Emilsson, G.M.5
Ruzzo, W.L.6
Breaker, R.R.7
-
20
-
-
84881466980
-
-
J. R. Mellin, T. Tiensuu, C. Bécavin, E. Gouin, J. Johansson, and P. Cossart, Proc. Natl. Acad. Sci. U. S. A. 110, 13132 (2013). 10.1073/pnas.1304795110
-
(2013)
Proc. Natl. Acad. Sci. U. S. A.
, vol.110
, pp. 13132
-
-
Mellin, J.R.1
Tiensuu, T.2
Bécavin, C.3
Gouin, E.4
Johansson, J.5
Cossart, P.6
-
21
-
-
0037453069
-
-
B. A. Murphy McDaniel, F. J. Grundy, I. Artsimovitch, and T. M. Henkin, Proc. Natl. Acad. Sci. U. S. A. 100, 3083 (2003). 10.1073/pnas.0630422100
-
(2003)
Proc. Natl. Acad. Sci. U. S. A.
, vol.100
, pp. 3083
-
-
Murphy McDaniel, B.A.1
Grundy, F.J.2
Artsimovitch, I.3
Henkin, T.M.4
-
23
-
-
84880512394
-
-
A. Reining, S. Nozinovic, K. Schlepckow, F. Buhr, B. Fürtig, and H. Schwalbe, Nature 499, 355 (2013). 10.1038/nature12378
-
(2013)
Nature
, vol.499
, pp. 355
-
-
Reining, A.1
Nozinovic, S.2
Schlepckow, K.3
Buhr, F.4
Fürtig, B.5
Schwalbe, H.6
-
24
-
-
34447548824
-
-
R. Rieder, K. Lang, D. Graber, and R. Micura, ChemBioChem 8, 896 (2007). 10.1002/cbic.200700057
-
(2007)
ChemBioChem
, vol.8
, pp. 896
-
-
Rieder, R.1
Lang, K.2
Graber, D.3
Micura, R.4
-
25
-
-
34249278470
-
-
M. T. Cheah, A. Wachter, N. Sudarsan, and R. R. Breaker, Nature 447, 497 (2007). 10.1038/nature05769
-
(2007)
Nature
, vol.447
, pp. 497
-
-
Cheah, M.T.1
Wachter, A.2
Sudarsan, N.3
Breaker, R.R.4
-
28
-
-
79851499341
-
-
J.-F. Lemay, G. Desnoyers, S. Blouin, B. Heppell, L. Bastet, P. St-Pierre, E. Massé, and D. A. Lafontaine, PLoS Genet. 7, e1001278 (2011). 10.1371/journal.pgen.1001278
-
(2011)
PLoS Genet.
, vol.7
, pp. e1001278
-
-
Lemay, J.-F.1
Desnoyers, G.2
Blouin, S.3
Heppell, B.4
Bastet, L.5
St-Pierre, P.6
Massé, E.7
Lafontaine, D.A.8
-
30
-
-
0037100667
-
-
A. G. Vitreschak, D. A. Rodionov, A. A. Mironov, and M. S. Gelfand, Nucleic Acids Res. 30, 3141 (2002). 10.1093/nar/gkf433
-
(2002)
Nucleic Acids Res.
, vol.30
, pp. 3141
-
-
Vitreschak, A.G.1
Rodionov, D.A.2
Mironov, A.A.3
Gelfand, M.S.4
-
32
-
-
77949327506
-
-
R. K. Montange, E. Mondragón, D. van Tyne, A. D. Garst, P. Ceres, and R. T. Batey, J. Mol. Biol. 396, 761 (2010). 10.1016/j.jmb.2009.12.007
-
(2010)
J. Mol. Biol.
, vol.396
, pp. 761
-
-
Montange, R.K.1
Mondragón, E.2
Van Tyne, D.3
Garst, A.D.4
Ceres, P.5
Batey, R.T.6
-
33
-
-
77954627025
-
-
C. D. Stoddard, R. K. Montange, S. P. Hennelly, R. P. Rambo, K. Y. Sanbonmatsu, and R. T. Batey, Structure 18, 787 (2010). 10.1016/j.str.2010.04.006
-
(2010)
Structure
, vol.18
, pp. 787
-
-
Stoddard, C.D.1
Montange, R.K.2
Hennelly, S.P.3
Rambo, R.P.4
Sanbonmatsu, K.Y.5
Batey, R.T.6
-
34
-
-
79956101942
-
-
B. Heppell, S. Blouin, A.-M. Dussault, J. Mulhbacher, E. Ennifar, J. C. Penedo, and D. A. Lafontaine, Nat. Chem. Biol. 7, 384 (2011). 10.1038/nchembio.563
-
(2011)
Nat. Chem. Biol.
, vol.7
, pp. 384
-
-
Heppell, B.1
Blouin, S.2
Dussault, A.-M.3
Mulhbacher, J.4
Ennifar, E.5
Penedo, J.C.6
Lafontaine, D.A.7
-
35
-
-
84861357374
-
-
V. K. Boyapati, W. Huang, J. Spedale, and F. Aboul-Ela, RNA 18, 1230 (2012). 10.1261/rna.032177.111
-
(2012)
RNA
, vol.18
, pp. 1230
-
-
Boyapati, V.K.1
Huang, W.2
Spedale, J.3
Aboul-Ela, F.4
-
36
-
-
84864234722
-
-
R. L. Hayes, J. K. Noel, U. Mohanty, P. C. Whitford, S. P. Hennelly, J. N. Onuchic, and K. Y. Sanbonmatsu, J. Am. Chem. Soc. 134, 12043 (2012). 10.1021/ja301454u
-
(2012)
J. Am. Chem. Soc.
, vol.134
, pp. 12043
-
-
Hayes, R.L.1
Noel, J.K.2
Mohanty, U.3
Whitford, P.C.4
Hennelly, S.P.5
Onuchic, J.N.6
Sanbonmatsu, K.Y.7
-
39
-
-
58849122772
-
-
P. C. Whitford, A. Schug, J. Saunders, S. P. Hennelly, J. N. Onuchic, and K. Y. Sanbonmatsu, Biophys. J. 96, L07 (2009). 10.1016/j.bpj.2008.10.033
-
(2009)
Biophys. J.
, vol.96
, pp. L07
-
-
Whitford, P.C.1
Schug, A.2
Saunders, J.3
Hennelly, S.P.4
Onuchic, J.N.5
Sanbonmatsu, K.Y.6
-
40
-
-
84878497970
-
-
W. Huang, J. Kim, S. Jha, and F. Aboul-ela, PLoS Comput. Biol. 9, e1003069 (2013). 10.1371/journal.pcbi.1003069
-
(2013)
PLoS Comput. Biol.
, vol.9
, pp. e1003069
-
-
Huang, W.1
Kim, J.2
Jha, S.3
Aboul-Ela, F.4
-
41
-
-
84895799734
-
-
B. Lutz, M. Faber, A. Verma, S. Klumpp, and A. Schug, Nucleic Acids Res. 42, 2687 (2014). 10.1093/nar/gkt1213
-
(2014)
Nucleic Acids Res.
, vol.42
, pp. 2687
-
-
Lutz, B.1
Faber, M.2
Verma, A.3
Klumpp, S.4
Schug, A.5
-
45
-
-
78649529299
-
-
C. Lu, F. Ding, A. Chowdhury, V. Pradhan, J. Tomsic, W. M. Holmes, T. M. Henkin, and A. Ke, J. Mol. Biol. 404, 803 (2010). 10.1016/j.jmb.2010.09.059
-
(2010)
J. Mol. Biol.
, vol.404
, pp. 803
-
-
Lu, C.1
Ding, F.2
Chowdhury, A.3
Pradhan, V.4
Tomsic, J.5
Holmes, W.M.6
Henkin, T.M.7
Ke, A.8
-
48
-
-
0033591465
-
-
D. H. Mathews, J. Sabina, M. Zuker, and D. H. Turner, J. Mol. Biol. 288, 911 (1999). 10.1006/jmbi.1999.2700
-
(1999)
J. Mol. Biol.
, vol.288
, pp. 911
-
-
Mathews, D.H.1
Sabina, J.2
Zuker, M.3
Turner, D.H.4
-
49
-
-
0032552882
-
-
T. Xia, J. SantaLucia, Jr., M. E. Burkard, R. Kierzek, S. J. Schroeder, X. Jiao, C. Cox, and D. H. Turner, Biochemistry 37, 14719 (1998). 10.1021/bi9809425
-
(1998)
Biochemistry
, vol.37
, pp. 14719
-
-
Xia, T.1
SantaLucia, Jr.J.2
Burkard, M.E.3
Kierzek, R.4
Schroeder, S.J.5
Jiao, X.6
Cox, C.7
Turner, D.H.8
-
50
-
-
38649086717
-
-
J. Tomšič, B. A. McDaniel, F. J. Grundy, and T. M. Henkin, J. Bacteriol. 190, 823 (2008). 10.1128/jb.01034-07
-
(2008)
J. Bacteriol.
, vol.190
, pp. 823
-
-
Tomšič, J.1
McDaniel, B.A.2
Grundy, F.J.3
Henkin, T.M.4
-
53
-
-
0035900642
-
-
I. Gusarov and E. Nudler, Cell 107, 437 (2001). 10.1016/S0092-8674(01)00582-7
-
(2001)
Cell
, vol.107
, pp. 437
-
-
Gusarov, I.1
Nudler, E.2
-
56
-
-
0033765116
-
-
I. Artsimovitch, V. Svetlov, L. Anthony, R. R. Burgess, and R. Landick, J. Bacteriol. 182, 6027 (2000). 10.1128/JB.182.21.6027-6035.2000
-
(2000)
J. Bacteriol.
, vol.182
, pp. 6027
-
-
Artsimovitch, I.1
Svetlov, V.2
Anthony, L.3
Burgess, R.R.4
Landick, R.5
-
57
-
-
15944382675
-
-
J. K. Wickiser, W. C. Winkler, R. R. Breaker, and D. M. Crothers, Mol. Cell 18, 49 (2005). 10.1016/j.molcel.2005.02.032
-
(2005)
Mol. Cell
, vol.18
, pp. 49
-
-
Wickiser, J.K.1
Winkler, W.C.2
Breaker, R.R.3
Crothers, D.M.4
-
58
-
-
84862673628
-
-
E. Nudler, Cell 149, 1438 (2012). 10.1016/j.cell.2012.06.003
-
(2012)
Cell
, vol.149
, pp. 1438
-
-
Nudler, E.1
-
60
-
-
84859702878
-
-
W. Huang, J. Kim, S. Jha, and F. Aboul-ela, J. Mol. Biol. 418, 331 (2012). 10.1016/j.jmb.2012.02.019
-
(2012)
J. Mol. Biol.
, vol.418
, pp. 331
-
-
Huang, W.1
Kim, J.2
Jha, S.3
Aboul-Ela, F.4
-
61
-
-
77649169870
-
-
E. M. Mahen, P. Y. Watson, J. W. Cottrell, and M. J. Fedor, PLoS Biol. 8, e1000307 (2010). 10.1371/journal.pbio.1000307
-
(2010)
PLoS Biol.
, vol.8
, pp. e1000307
-
-
Mahen, E.M.1
Watson, P.Y.2
Cottrell, J.W.3
Fedor, M.J.4
-
62
-
-
84892621662
-
-
J. Chen, S. Gong, Y. Wang, and W. Zhang, J. Chem. Phys. 140, 025102 (2014). 10.1063/1.4861037
-
(2014)
J. Chem. Phys.
, vol.140
-
-
Chen, J.1
Gong, S.2
Wang, Y.3
Zhang, W.4
-
63
-
-
33847682251
-
-
E. Koculi, C. Hyeon, D. Thirumalai, and S. A. Woodson, J. Am. Chem. Soc. 129, 2676 (2007). 10.1021/ja068027r
-
(2007)
J. Am. Chem. Soc.
, vol.129
, pp. 2676
-
-
Koculi, E.1
Hyeon, C.2
Thirumalai, D.3
Woodson, S.A.4
-
65
-
-
1242274330
-
-
D. E. Draper, RNA 10, 335 (2004). 10.1261/rna.5205404
-
(2004)
RNA
, vol.10
, pp. 335
-
-
Draper, D.E.1
|