-
1
-
-
84871788221
-
Comparative analysis of syntenic genes in grass genomes reveals accelerated rates of gene structure and coding sequence evolution in polyploid wheat
-
E.D. Akhunov, S. Sehgal, H.Q. Liang, S.C. Wang, A.R. Akhunova, G. Kaur, W.L. Li, K.L. Forrest, D. See, and H. Šimková Comparative analysis of syntenic genes in grass genomes reveals accelerated rates of gene structure and coding sequence evolution in polyploid wheat Plant Physiol. 161 2013 252 265
-
(2013)
Plant Physiol.
, vol.161
, pp. 252-265
-
-
Akhunov, E.D.1
Sehgal, S.2
Liang, H.Q.3
Wang, S.C.4
Akhunova, A.R.5
Kaur, G.6
Li, W.L.7
Forrest, K.L.8
See, D.9
Šimková, H.10
-
3
-
-
0030733792
-
Developmental-dependent inheritance of 5-azacytidine-induced epimutations in triticale: Analysis of rDNA expression patterns
-
L. Amado, R. Abranches, N. Neves, and W. Viegas Developmental-dependent inheritance of 5-azacytidine-induced epimutations in triticale: analysis of rDNA expression patterns Chromosome Res. 5 1997 445 450
-
(1997)
Chromosome Res.
, vol.5
, pp. 445-450
-
-
Amado, L.1
Abranches, R.2
Neves, N.3
Viegas, W.4
-
4
-
-
84886340414
-
Reprogramming of gene expression in the genetically stable bread allohexaploid wheat
-
Z.J. Chen, J.A. Birchler, John Wiley & Sons Hoboken, NJ
-
D. Arnaud, H. Chelaifa, J. Jahier, and B. Chalhoub Reprogramming of gene expression in the genetically stable bread allohexaploid wheat Z.J. Chen, J.A. Birchler, Polyploid and Hybrid Genomics 2013 John Wiley & Sons Hoboken, NJ 195 211
-
(2013)
Polyploid and Hybrid Genomics
, pp. 195-211
-
-
Arnaud, D.1
Chelaifa, H.2
Jahier, J.3
Chalhoub, B.4
-
5
-
-
80054838610
-
Genomic expression dominance in the natural allopolyploid Coffea arabica is massively affected by growth temperature
-
A. Bardil, J.D. de Almeida, M.C. Combes, P. Lashermes, and B. Bertrand Genomic expression dominance in the natural allopolyploid Coffea arabica is massively affected by growth temperature New Phytol. 192 2011 760 774
-
(2011)
New Phytol.
, vol.192
, pp. 760-774
-
-
Bardil, A.1
De Almeida, J.D.2
Combes, M.C.3
Lashermes, P.4
Bertrand, B.5
-
6
-
-
79952907997
-
Size matters in Triticeae polyploids: Larger genomes have higher remodeling
-
M. Bento, J.P. Gustafson, W. Viegas, and M. Silva Size matters in Triticeae polyploids: larger genomes have higher remodeling Genome 54 2011 175 183
-
(2011)
Genome
, vol.54
, pp. 175-183
-
-
Bento, M.1
Gustafson, J.P.2
Viegas, W.3
Silva, M.4
-
7
-
-
0027947023
-
Complementary gene interactions in alfalfa are greater in autotetraploids than diploids
-
E.T. Bingham, R.W. Groose, D.R. Woodfield, and K.K. Kidwell Complementary gene interactions in alfalfa are greater in autotetraploids than diploids Crop Sci. 34 1994 823 829
-
(1994)
Crop Sci.
, vol.34
, pp. 823-829
-
-
Bingham, E.T.1
Groose, R.W.2
Woodfield, D.R.3
Kidwell, K.K.4
-
8
-
-
53549108881
-
Variation for homoeologous gene silencing in hexaploid wheat
-
A. Bottley, and R.M.D. Koebner Variation for homoeologous gene silencing in hexaploid wheat Plant J. 56 2008 297 302
-
(2008)
Plant J.
, vol.56
, pp. 297-302
-
-
Bottley, A.1
Koebner, R.M.D.2
-
9
-
-
33748319356
-
Homoeologous gene silencing in hexaploid wheat
-
A. Bottley, G.M. Xia, and R.M.D. Koebner Homoeologous gene silencing in hexaploid wheat Plant J. 47 2006 897 906
-
(2006)
Plant J.
, vol.47
, pp. 897-906
-
-
Bottley, A.1
Xia, G.M.2
Koebner, R.M.D.3
-
10
-
-
84870260198
-
Analysis of the bread wheat genome using whole-genome shotgun sequencing
-
R. Brenchley, M. Spannagl, M. Pfeifer, G.L. Barker, R. D'Amore, A.M. Allen, N. McKenzie, M. Kramer, A. Kerhornou, and D. Bolser Analysis of the bread wheat genome using whole-genome shotgun sequencing Nature 491 2012 705 710
-
(2012)
Nature
, vol.491
, pp. 705-710
-
-
Brenchley, R.1
Spannagl, M.2
Pfeifer, M.3
Barker, G.L.4
D'Amore, R.5
Allen, A.M.6
McKenzie, N.7
Kramer, M.8
Kerhornou, A.9
Bolser, D.10
-
11
-
-
57149104113
-
An epigenetic role for maternally inherited piRNAs in transposon silencing
-
J. Brennecke, C.D. Malone, A.A. Aravin, R. Sachidanandam, A. Stark, and G.J. Hannon An epigenetic role for maternally inherited piRNAs in transposon silencing Science 322 2008 1387 1392
-
(2008)
Science
, vol.322
, pp. 1387-1392
-
-
Brennecke, J.1
Malone, C.D.2
Aravin, A.A.3
Sachidanandam, R.4
Stark, A.5
Hannon, G.J.6
-
12
-
-
37049192065
-
The Mendelian theory of heredity and the augmentation of vigor
-
A.B. Bruce The Mendelian theory of heredity and the augmentation of vigor Science 32 1910 627 628
-
(1910)
Science
, vol.32
, pp. 627-628
-
-
Bruce, A.B.1
-
13
-
-
79953789287
-
Transcriptomic shock generates evolutionary novelty in a newly formed, natural allopolyploid plant
-
R.J. Buggs, A. Zhang, L.N. Miles, J.A. Tate, L. Gao, W. Wei, P.S. Schnable, W.B. Barbazuk, P.S. Soltis, and D.E. Soltis Transcriptomic shock generates evolutionary novelty in a newly formed, natural allopolyploid plant Curr. Biol. 21 2011 551 556
-
(2011)
Curr. Biol.
, vol.21
, pp. 551-556
-
-
Buggs, R.J.1
Zhang, A.2
Miles, L.N.3
Tate, J.A.4
Gao, L.5
Wei, W.6
Schnable, P.S.7
Barbazuk, W.B.8
Soltis, P.S.9
Soltis, D.E.10
-
14
-
-
77955727160
-
Genome-wide gene expression changes in genetically stable synthetic and natural wheat allohexaploids
-
V. Chague, J. Just, I. Mestiri, S. Balzergue, A.M. Tanguy, C. Huneau, V. Huteau, H. Belcram, O. Coriton, and J. Jahier Genome-wide gene expression changes in genetically stable synthetic and natural wheat allohexaploids New Phytol. 187 2010 1181 1194
-
(2010)
New Phytol.
, vol.187
, pp. 1181-1194
-
-
Chague, V.1
Just, J.2
Mestiri, I.3
Balzergue, S.4
Tanguy, A.M.5
Huneau, C.6
Huteau, V.7
Belcram, H.8
Coriton, O.9
Jahier, J.10
-
15
-
-
35348996554
-
Specialization and evolution of endogenous small RNA pathways
-
E.J. Chapman, and J.C. Carrington Specialization and evolution of endogenous small RNA pathways Nat. Rev. Genet. 8 2007 884 896
-
(2007)
Nat. Rev. Genet.
, vol.8
, pp. 884-896
-
-
Chapman, E.J.1
Carrington, J.C.2
-
16
-
-
67650888375
-
Reciprocal silencing, transcriptional bias and functional divergence of homeologs in polyploid cotton (Gossypium)
-
B. Chaudhary, L. Flagel, R.M. Stupar, J.A. Udall, N. Verma, N.M. Springer, and J.F. Wendel Reciprocal silencing, transcriptional bias and functional divergence of homeologs in polyploid cotton (Gossypium) Genetics 182 2009 503 517
-
(2009)
Genetics
, vol.182
, pp. 503-517
-
-
Chaudhary, B.1
Flagel, L.2
Stupar, R.M.3
Udall, J.A.4
Verma, N.5
Springer, N.M.6
Wendel, J.F.7
-
17
-
-
84872127434
-
Prevalence of gene expression additivity in genetically stable wheat allohexaploids
-
H. Chelaifa, V. Chague, S. Chalabi, I. Mestiri, D. Arnaud, D. Deffains, Y. Lu, H. Belcram, V. Huteau, and J. Chiquet Prevalence of gene expression additivity in genetically stable wheat allohexaploids New Phytol. 197 2013 730 736
-
(2013)
New Phytol.
, vol.197
, pp. 730-736
-
-
Chelaifa, H.1
Chague, V.2
Chalabi, S.3
Mestiri, I.4
Arnaud, D.5
Deffains, D.6
Lu, Y.7
Belcram, H.8
Huteau, V.9
Chiquet, J.10
-
18
-
-
34248328910
-
Genetic and epigenetic mechanisms for gene expression and phenotypic variation in plant polyploids
-
Z.J. Chen Genetic and epigenetic mechanisms for gene expression and phenotypic variation in plant polyploids Annu. Rev. Plant Biol. 58 2007 377 406
-
(2007)
Annu. Rev. Plant Biol.
, vol.58
, pp. 377-406
-
-
Chen, Z.J.1
-
19
-
-
75949117260
-
Molecular mechanisms of polyploidy and hybrid vigor
-
Z.J. Chen Molecular mechanisms of polyploidy and hybrid vigor Trends Plant Sci. 15 2010 57 71
-
(2010)
Trends Plant Sci.
, vol.15
, pp. 57-71
-
-
Chen, Z.J.1
-
20
-
-
84879412664
-
Genomic and epigenetic insights into the molecular bases of heterosis
-
Z.J. Chen Genomic and epigenetic insights into the molecular bases of heterosis Nat. Rev. Genet. 14 2013 471 482
-
(2013)
Nat. Rev. Genet.
, vol.14
, pp. 471-482
-
-
Chen, Z.J.1
-
21
-
-
45849142231
-
RNAi of met1 reduces DNA methylation and induces genome-specific changes in gene expression and centromeric small RNA accumulation in Arabidopsis allopolyploids
-
M. Chen, M. Ha, E. Lackey, J. Wang, and Z.J. Chen RNAi of met1 reduces DNA methylation and induces genome-specific changes in gene expression and centromeric small RNA accumulation in Arabidopsis allopolyploids Genetics 178 2008 1845 1858
-
(2008)
Genetics
, vol.178
, pp. 1845-1858
-
-
Chen, M.1
Ha, M.2
Lackey, E.3
Wang, J.4
Chen, Z.J.5
-
22
-
-
84860424914
-
Biased gene fractionation and dominant gene expression among the subgenomes of Brassica rapa
-
F. Cheng, J. Wu, L. Fang, S.L. Sun, B. Liu, K. Lin, G. Bonnema, and X.W. Wang Biased gene fractionation and dominant gene expression among the subgenomes of Brassica rapa PLoS One 7 2012 e36442
-
(2012)
PLoS One
, vol.7
, pp. e36442
-
-
Cheng, F.1
Wu, J.2
Fang, L.3
Sun, S.L.4
Liu, B.5
Lin, K.6
Bonnema, G.7
Wang, X.W.8
-
23
-
-
84856390205
-
Extensive chromosomal variation in a recently formed natural allopolyploid species, Tragopogon miscellus (Asteraceae)
-
M. Chester, J.P. Gallagher, V.V. Symonds, d.S.A.V. Cruz, E.V. Mavrodiev, A.R. Leitch, P.S. Soltis, and D.E. Soltis Extensive chromosomal variation in a recently formed natural allopolyploid species, Tragopogon miscellus (Asteraceae) Proc. Natl. Acad. Sci. USA 109 2012 1176 1181
-
(2012)
Proc. Natl. Acad. Sci. USA
, vol.109
, pp. 1176-1181
-
-
Chester, M.1
Gallagher, J.P.2
Symonds, V.V.3
Cruz, D.S.A.V.4
Mavrodiev, E.V.5
Leitch, A.R.6
Soltis, P.S.7
Soltis, D.E.8
-
24
-
-
33645027873
-
Use of wild relatives to improve salt tolerance in wheat
-
T.D. Colmer, T.J. Flowers, and R. Munns Use of wild relatives to improve salt tolerance in wheat J. Exp. Bot. 57 2006 1059 1078
-
(2006)
J. Exp. Bot.
, vol.57
, pp. 1059-1078
-
-
Colmer, T.D.1
Flowers, T.J.2
Munns, R.3
-
25
-
-
33644681986
-
The advantages and disadvantages of being polyploid
-
L. Comai The advantages and disadvantages of being polyploid Nat. Rev. Genet. 6 2005 836 846
-
(2005)
Nat. Rev. Genet.
, vol.6
, pp. 836-846
-
-
Comai, L.1
-
26
-
-
0033789617
-
Phenotypic instability and rapid gene silencing in newly formed Arabidopsis allotetraploids
-
L. Comai, A.P. Tyagi, K. Winter, R. Holmes-Davis, S.H. Reynolds, Y. Stevens, and B. Byers Phenotypic instability and rapid gene silencing in newly formed Arabidopsis allotetraploids Plant Cell 12 2000 1551 1568
-
(2000)
Plant Cell
, vol.12
, pp. 1551-1568
-
-
Comai, L.1
Tyagi, A.P.2
Winter, K.3
Holmes-Davis, R.4
Reynolds, S.H.5
Stevens, Y.6
Byers, B.7
-
27
-
-
59749083470
-
Constitutive expression of OsGH3.1 reduces auxin content and enhances defense response and resistance to a fungal pathogen in rice
-
C. Domingo, F. Andrés, D. Tharreau, D.J. Iglesias, and M. Talón Constitutive expression of OsGH3.1 reduces auxin content and enhances defense response and resistance to a fungal pathogen in rice Mol. Plant Microbe Interact. 22 2009 201 210
-
(2009)
Mol. Plant Microbe Interact.
, vol.22
, pp. 201-210
-
-
Domingo, C.1
Andrés, F.2
Tharreau, D.3
Iglesias, D.J.4
Talón, M.5
-
28
-
-
34347399464
-
Genome plasticity a key factor in the success of polyploid wheat under domestication
-
J. Dubcovsky, and J. Dvorak Genome plasticity a key factor in the success of polyploid wheat under domestication Science 316 2007 1862 1866
-
(2007)
Science
, vol.316
, pp. 1862-1866
-
-
Dubcovsky, J.1
Dvorak, J.2
-
29
-
-
49249116833
-
Nuclear DNA amount and genome downsizing in natural and synthetic allopolyploids of the genera Aegilops and Triticum
-
T. Eilam, Y. Anikster, E. Millet, J. Manisterski, and M. Feldman Nuclear DNA amount and genome downsizing in natural and synthetic allopolyploids of the genera Aegilops and Triticum Genome 51 2008 616 627
-
(2008)
Genome
, vol.51
, pp. 616-627
-
-
Eilam, T.1
Anikster, Y.2
Millet, E.3
Manisterski, J.4
Feldman, M.5
-
30
-
-
80052782297
-
Genome size in diploids, allopolyploids, and autopolyploids of Mediterranean Triticeae
-
T. Eilam, Y. Anikster, E. Millet, J. Manisterski, and M. Feldman Genome size in diploids, allopolyploids, and autopolyploids of Mediterranean Triticeae J. Bot. 2010 2010 10.1155/2010/341380
-
(2010)
J. Bot.
, vol.2010
-
-
Eilam, T.1
Anikster, Y.2
Millet, E.3
Manisterski, J.4
Feldman, M.5
-
31
-
-
70349288278
-
Genome evolution in allopolyploid wheat - A revolutionary reprogramming followed by gradual changes
-
M. Feldman, and A.A. Levy Genome evolution in allopolyploid wheat - a revolutionary reprogramming followed by gradual changes J. Genet. Genomics 36 2009 511 518
-
(2009)
J. Genet. Genomics
, vol.36
, pp. 511-518
-
-
Feldman, M.1
Levy, A.A.2
-
32
-
-
84865772155
-
Genomic asymmetry in allopolyploid plants: Wheat as a model
-
M. Feldman, A.A. Levy, T. Fahima, and A. Korol Genomic asymmetry in allopolyploid plants: wheat as a model J. Exp. Bot. 63 2012 5045 5059
-
(2012)
J. Exp. Bot.
, vol.63
, pp. 5045-5059
-
-
Feldman, M.1
Levy, A.A.2
Fahima, T.3
Korol, A.4
-
33
-
-
84869040067
-
Genomic plasticity in polyploid wheat
-
P.S. Soltis, D.E. Soltis, Springer New York
-
M. Feldman, A. Levy, B. Chalhoub, and K. Kashkush Genomic plasticity in polyploid wheat P.S. Soltis, D.E. Soltis, Polyploidy and Genome Evolution 2012 Springer New York 109 135
-
(2012)
Polyploidy and Genome Evolution
, pp. 109-135
-
-
Feldman, M.1
Levy, A.2
Chalhoub, B.3
Kashkush, K.4
-
34
-
-
77950931393
-
Evolutionary rate variation, genomic dominance and duplicate gene expression evolution during allotetraploid cotton speciation
-
L.E. Flagel, and J.F. Wendel Evolutionary rate variation, genomic dominance and duplicate gene expression evolution during allotetraploid cotton speciation New Phytol. 186 2010 184 193
-
(2010)
New Phytol.
, vol.186
, pp. 184-193
-
-
Flagel, L.E.1
Wendel, J.F.2
-
35
-
-
84893062974
-
Two evolutionarily distinct classes of paleopolyploidy
-
O. Garsmeur, J.C. Schnable, A. Almeida, C. Jourda, A. Hont, and M. Freeling Two evolutionarily distinct classes of paleopolyploidy Mol. Biol. Evol. 31 2014 448 454
-
(2014)
Mol. Biol. Evol.
, vol.31
, pp. 448-454
-
-
Garsmeur, O.1
Schnable, J.C.2
Almeida, A.3
Jourda, C.4
Hont, A.5
Freeling, M.6
-
36
-
-
0000923953
-
Progressive heterosis in autotetraploid alfalfa: Studies using 2 types of inbreds
-
R.W. Groose, L.E. Talbert, W.P. Kojis, and E.T. Bingham Progressive heterosis in autotetraploid alfalfa: studies using 2 types of inbreds Crop Sci. 29 1989 1173 1177
-
(1989)
Crop Sci.
, vol.29
, pp. 1173-1177
-
-
Groose, R.W.1
Talbert, L.E.2
Kojis, W.P.3
Bingham, E.T.4
-
37
-
-
84888138244
-
The role of epigenetics in hybrid vigour
-
M. Groszmann, I.K. Greaves, R. Fujimoto, W.J. Peacock, and E.S. Dennis The role of epigenetics in hybrid vigour Trends Genet. 29 2013 684 690
-
(2013)
Trends Genet.
, vol.29
, pp. 684-690
-
-
Groszmann, M.1
Greaves, I.K.2
Fujimoto, R.3
Peacock, W.J.4
Dennis, E.S.5
-
38
-
-
84868595333
-
Homoeolog expression bias and expression level dominance in allopolyploids
-
C.E. Grover, J.P. Gallagher, E.P. Szadkowski, M.J. Yoo, L.E. Flagel, and J.F. Wendel Homoeolog expression bias and expression level dominance in allopolyploids New Phytol. 196 2012 966 971
-
(2012)
New Phytol.
, vol.196
, pp. 966-971
-
-
Grover, C.E.1
Gallagher, J.P.2
Szadkowski, E.P.3
Yoo, M.J.4
Flagel, L.E.5
Wendel, J.F.6
-
39
-
-
84892773410
-
MiR828 and miR858 regulate homoeologous MYB2 gene functions in Arabidopsis trichome and cotton fibre development
-
X. Guan, M. Pang, G. Nah, X. Shi, W. Ye, D.M. Stelly, and Z.J. Chen miR828 and miR858 regulate homoeologous MYB2 gene functions in Arabidopsis trichome and cotton fibre development Nat. Commun. 5 2014 3050
-
(2014)
Nat. Commun.
, vol.5
, pp. 3050
-
-
Guan, X.1
Pang, M.2
Nah, G.3
Shi, X.4
Ye, W.5
Stelly, D.M.6
Chen, Z.J.7
-
40
-
-
84905166105
-
Polyploidy and small RNA regulation of cotton fiber development
-
X. Guan, Q. Song, and Z.J. Chen Polyploidy and small RNA regulation of cotton fiber development Trends Plant Sci. 19 2014 516 528
-
(2014)
Trends Plant Sci.
, vol.19
, pp. 516-528
-
-
Guan, X.1
Song, Q.2
Chen, Z.J.3
-
41
-
-
84919819893
-
Asymmetric epigenetic modification and elimination of rDNA sequences by polyploidization in wheat
-
X. Guo, and F.P. Han Asymmetric epigenetic modification and elimination of rDNA sequences by polyploidization in wheat Plant Cell 26 2014 4311 4327
-
(2014)
Plant Cell
, vol.26
, pp. 4311-4327
-
-
Guo, X.1
Han, F.P.2
-
42
-
-
70449588694
-
Small RNAs serve as a genetic buffer against genomic shock in Arabidopsis interspecific hybrids and allopolyploids
-
M. Ha, J. Lu, L. Tian, V. Ramachandran, K.D. Kasschau, E.J. Chapman, J.C. Carrington, X. Chen, X.J. Wang, and Z.J. Chen Small RNAs serve as a genetic buffer against genomic shock in Arabidopsis interspecific hybrids and allopolyploids Proc. Natl. Acad. Sci. USA 106 2009 17835 17840
-
(2009)
Proc. Natl. Acad. Sci. USA
, vol.106
, pp. 17835-17840
-
-
Ha, M.1
Lu, J.2
Tian, L.3
Ramachandran, V.4
Kasschau, K.D.5
Chapman, E.J.6
Carrington, J.C.7
Chen, X.8
Wang, X.J.9
Chen, Z.J.10
-
43
-
-
23344449410
-
Rapid and repeatable elimination of a parental genome-specific DNA repeat (pGc1R-1a) in newly synthesized wheat allopolyploids
-
F.P. Han, G. Fedak, W. Guo, and B. Liu Rapid and repeatable elimination of a parental genome-specific DNA repeat (pGc1R-1a) in newly synthesized wheat allopolyploids Genetics 170 2005 1239 1245
-
(2005)
Genetics
, vol.170
, pp. 1239-1245
-
-
Han, F.P.1
Fedak, G.2
Guo, W.3
Liu, B.4
-
44
-
-
0037560724
-
Allopolyploidy alters gene expression in the highly stable hexaploid wheat
-
P. He, B.R. Friebe, B.S. Gill, and J.M. Zhou Allopolyploidy alters gene expression in the highly stable hexaploid wheat Plant Mol. Biol. 52 2003 401 414
-
(2003)
Plant Mol. Biol.
, vol.52
, pp. 401-414
-
-
He, P.1
Friebe, B.R.2
Gill, B.S.3
Zhou, J.M.4
-
45
-
-
43449099736
-
Genomic clues to the evolutionary success of polyploid plants
-
M.J. Hegarty, and S.J. Hiscock Genomic clues to the evolutionary success of polyploid plants Curr. Biol. 18 2008 R435 R444
-
(2008)
Curr. Biol.
, vol.18
, pp. R435-R444
-
-
Hegarty, M.J.1
Hiscock, S.J.2
-
46
-
-
33747161960
-
Transcriptome shock after interspecific hybridization in Senecio is ameliorated by genome duplication
-
M.J. Hegarty, G.L. Barker, I.D. Wilson, R.J. Abbott, K.J. Edwards, and S.J. Hiscock Transcriptome shock after interspecific hybridization in Senecio is ameliorated by genome duplication Curr. Biol. 16 2006 1652 1659
-
(2006)
Curr. Biol.
, vol.16
, pp. 1652-1659
-
-
Hegarty, M.J.1
Barker, G.L.2
Wilson, I.D.3
Abbott, R.J.4
Edwards, K.J.5
Hiscock, S.J.6
-
47
-
-
0025645782
-
Gene expression and parental dominance in hybrid plants
-
J.S. Heslop-Harrison Gene expression and parental dominance in hybrid plants Dev. Cell 1990 21 28
-
(1990)
Dev. Cell
, pp. 21-28
-
-
Heslop-Harrison, J.S.1
-
48
-
-
84904382612
-
A chromosome-based draft sequence of the hexaploid bread wheat (Triticum aestivum) genome
-
International Wheat Genome Sequencing Consortium (IWGSC) A chromosome-based draft sequence of the hexaploid bread wheat (Triticum aestivum) genome Science 345 2014 1251788
-
(2014)
Science
, vol.345
, pp. 1251788
-
-
-
49
-
-
77951171017
-
Genomic and expression plasticity of polyploidy
-
S. Jackson, and Z.J. Chen Genomic and expression plasticity of polyploidy Curr. Opin. Plant Biol. 13 2010 153 159
-
(2010)
Curr. Opin. Plant Biol.
, vol.13
, pp. 153-159
-
-
Jackson, S.1
Chen, Z.J.2
-
50
-
-
84875898037
-
The Aegilops tauschii draft genome sequence reveals gene repertoire for wheat adaptation
-
J. Jia, S. Zhao, X. Kong, Y. Li, G. Zhao, W. He, R. Appels, M. Pfeifer, Y. Tao, and X. Zhang The Aegilops tauschii draft genome sequence reveals gene repertoire for wheat adaptation Nature 496 2013 91 95
-
(2013)
Nature
, vol.496
, pp. 91-95
-
-
Jia, J.1
Zhao, S.2
Kong, X.3
Li, Y.4
Zhao, G.5
He, W.6
Appels, R.7
Pfeifer, M.8
Tao, Y.9
Zhang, X.10
-
51
-
-
0001136614
-
Dominance of linked factors as a means of accounting for heterosis
-
D.F. Jones Dominance of linked factors as a means of accounting for heterosis Genetics 2 1917 466 479
-
(1917)
Genetics
, vol.2
, pp. 466-479
-
-
Jones, D.F.1
-
52
-
-
0036241339
-
Gene loss, silencing and activation in a newly synthesized wheat allotetraploid
-
K. Kashkush, M. Feldman, and A.A. Levy Gene loss, silencing and activation in a newly synthesized wheat allotetraploid Genetics 160 2002 1651 1659
-
(2002)
Genetics
, vol.160
, pp. 1651-1659
-
-
Kashkush, K.1
Feldman, M.2
Levy, A.A.3
-
53
-
-
0037226595
-
Transcriptional activation of retrotransposons alters the expression of adjacent genes in wheat
-
K. Kashkush, M. Feldman, and A.A. Levy Transcriptional activation of retrotransposons alters the expression of adjacent genes in wheat Nat. Genet. 33 2003 102 106
-
(2003)
Nat. Genet.
, vol.33
, pp. 102-106
-
-
Kashkush, K.1
Feldman, M.2
Levy, A.A.3
-
54
-
-
79958231735
-
Wheat hybridization and polyploidization results in deregulation of small RNAs
-
M. Kenan-Eichler, D. Leshkowitz, L. Tal, E. Noor, C. Melamed-Bessudo, M. Feldman, and A.A. Levy Wheat hybridization and polyploidization results in deregulation of small RNAs Genetics 188 2011 263 272
-
(2011)
Genetics
, vol.188
, pp. 263-272
-
-
Kenan-Eichler, M.1
Leshkowitz, D.2
Tal, L.3
Noor, E.4
Melamed-Bessudo, C.5
Feldman, M.6
Levy, A.A.7
-
55
-
-
0001018538
-
Discovery of the DD analyser, one of the tetraploid
-
H. Kihara Discovery of the DD analyser, one of the tetraploid Agric. Hortic. 19 1944 889 890
-
(1944)
Agric. Hortic.
, vol.19
, pp. 889-890
-
-
Kihara, H.1
-
56
-
-
78951489213
-
Genetic and epigenetic dynamics of a retrotransposon after allopolyploidization of wheat
-
Z. Kraitshtein, B. Yaakov, V. Khasdan, and K. Kashkush Genetic and epigenetic dynamics of a retrotransposon after allopolyploidization of wheat Genetics 186 2010 U801 U889
-
(2010)
Genetics
, vol.186
, pp. U801-U889
-
-
Kraitshtein, Z.1
Yaakov, B.2
Khasdan, V.3
Kashkush, K.4
-
57
-
-
82355176023
-
Immediate unidirectional epigenetic reprogramming of NORs occurs independently of rDNA rearrangements in synthetic and natural forms of a polyploid species Brassica napus
-
T. Ksiazczyk, A. Kovarik, F. Eber, V. Huteau, L. Khaitova, Z. Tesarikova, O. Coriton, and A.-M. Chèvre Immediate unidirectional epigenetic reprogramming of NORs occurs independently of rDNA rearrangements in synthetic and natural forms of a polyploid species Brassica napus Chromosoma 120 2011 557 571
-
(2011)
Chromosoma
, vol.120
, pp. 557-571
-
-
Ksiazczyk, T.1
Kovarik, A.2
Eber, F.3
Huteau, V.4
Khaitova, L.5
Tesarikova, Z.6
Coriton, O.7
Chèvre, A.-M.8
-
58
-
-
42549129942
-
Genomic plasticity and the diversity of polyploid plants
-
A. Leitch, and I. Leitch Genomic plasticity and the diversity of polyploid plants Science 320 2008 481 483
-
(2008)
Science
, vol.320
, pp. 481-483
-
-
Leitch, A.1
Leitch, I.2
-
59
-
-
84903618373
-
MRNA and small RNA transcriptomes reveal insights into dynamic homoeolog regulation of allopolyploid heterosis in nascent hexaploid wheat
-
A. Li, D. Liu, J. Wu, X. Zhao, M. Hao, S. Geng, J. Yan, X. Jiang, L. Zhang, and J. Wu mRNA and small RNA transcriptomes reveal insights into dynamic homoeolog regulation of allopolyploid heterosis in nascent hexaploid wheat Plant Cell 26 2014 1878 1900
-
(2014)
Plant Cell
, vol.26
, pp. 1878-1900
-
-
Li, A.1
Liu, D.2
Wu, J.3
Zhao, X.4
Hao, M.5
Geng, S.6
Yan, J.7
Jiang, X.8
Zhang, L.9
Wu, J.10
-
60
-
-
84908689021
-
Genomic analyses provide insights into the history of tomato breeding
-
T. Lin, G.T. Zhu, J.H. Zhang, X.Y. Xu, Q.H. Yu, Z. Zheng, Z.H. Zhang, Y.Y. Lun, S. Li, and X.X. Wang Genomic analyses provide insights into the history of tomato breeding Nat. Genet. 46 2014 1220 1226
-
(2014)
Nat. Genet.
, vol.46
, pp. 1220-1226
-
-
Lin, T.1
Zhu, G.T.2
Zhang, J.H.3
Xu, X.Y.4
Yu, Q.H.5
Zheng, Z.6
Zhang, Z.H.7
Lun, Y.Y.8
Li, S.9
Wang, X.X.10
-
61
-
-
85009146268
-
The draft genome of Triticum urartu
-
H.-Q. Ling, S. Zhao, D. Liu, J. Wang, H. Sun, C. Zhang, H. Fan, D. Li, L. Dong, and Y. Tao The draft genome of Triticum urartu Nature 496 2013 487 490
-
(2013)
Nature
, vol.496
, pp. 487-490
-
-
Ling, H.-Q.1
Zhao, S.2
Liu, D.3
Wang, J.4
Sun, H.5
Zhang, C.6
Fan, H.7
Li, D.8
Dong, L.9
Tao, Y.10
-
62
-
-
84919682706
-
The miR9863 family regulates distinct Mla alleles in barley to attenuate NLR receptor-triggered disease resistance and cell-death signaling
-
J. Liu, X.L. Cheng, D. Liu, W.H. Xu, R. Wise, and Q.H. Shen The miR9863 family regulates distinct Mla alleles in barley to attenuate NLR receptor-triggered disease resistance and cell-death signaling PLoS Genet. 10 2014 e1004755
-
(2014)
PLoS Genet.
, vol.10
, pp. e1004755
-
-
Liu, J.1
Cheng, X.L.2
Liu, D.3
Xu, W.H.4
Wise, R.5
Shen, Q.H.6
-
63
-
-
84859464802
-
Maternal siRNAs as regulators of parental genome imbalance and gene expression in endosperm of Arabidopsis seeds
-
J. Lu, C. Zhang, D.C. Baulcombe, and Z.J. Chen Maternal siRNAs as regulators of parental genome imbalance and gene expression in endosperm of Arabidopsis seeds Proc. Natl. Acad. Sci. USA 109 2012 5529 5534
-
(2012)
Proc. Natl. Acad. Sci. USA
, vol.109
, pp. 5529-5534
-
-
Lu, J.1
Zhang, C.2
Baulcombe, D.C.3
Chen, Z.J.4
-
64
-
-
84867802864
-
Microsatellite mutation rate during allohexaploidization of newly resynthesized wheat
-
J.T. Luo, M. Hao, L. Zhang, J.X. Chen, L.Q. Zhang, Z.W. Yuan, Z.H. Yan, Y.L. Zheng, H.G. Zhang, and Y. Yen Microsatellite mutation rate during allohexaploidization of newly resynthesized wheat Int. J. Mol. Sci. 13 2012 12533 12543
-
(2012)
Int. J. Mol. Sci.
, vol.13
, pp. 12533-12543
-
-
Luo, J.T.1
Hao, M.2
Zhang, L.3
Chen, J.X.4
Zhang, L.Q.5
Yuan, Z.W.6
Yan, Z.H.7
Zheng, Y.L.8
Zhang, H.G.9
Yen, Y.10
-
65
-
-
0034634395
-
The evolutionary fate and consequences of duplicate genes
-
M. Lynch, and J.S. Conery The evolutionary fate and consequences of duplicate genes Science 290 2000 1151 1155
-
(2000)
Science
, vol.290
, pp. 1151-1155
-
-
Lynch, M.1
Conery, J.S.2
-
66
-
-
0033972072
-
The probability of duplicate gene preservation by subfunctionalization
-
M. Lynch, and A. Force The probability of duplicate gene preservation by subfunctionalization Genetics 154 2000 459 473
-
(2000)
Genetics
, vol.154
, pp. 459-473
-
-
Lynch, M.1
Force, A.2
-
67
-
-
16344369286
-
Genome evolution of allopolyploids: A process of cytological and genetic diploidization
-
X.F. Ma, and J.P. Gustafson Genome evolution of allopolyploids: a process of cytological and genetic diploidization Cytogenet. Genome Res. 109 2005 236 249
-
(2005)
Cytogenet. Genome Res.
, vol.109
, pp. 236-249
-
-
Ma, X.F.1
Gustafson, J.P.2
-
68
-
-
33845425611
-
Timing and rate of genome variation in triticale following allopolyploidization
-
X.F. Ma, and J.P. Gustafson Timing and rate of genome variation in triticale following allopolyploidization Genome 49 2006 950 958
-
(2006)
Genome
, vol.49
, pp. 950-958
-
-
Ma, X.F.1
Gustafson, J.P.2
-
69
-
-
48849092200
-
Allopolyploidization-accommodated genomic sequence changes in Triticale
-
X.F. Ma, and J.P. Gustafson Allopolyploidization-accommodated genomic sequence changes in Triticale Ann. Bot. 101 2008 825 832
-
(2008)
Ann. Bot.
, vol.101
, pp. 825-832
-
-
Ma, X.F.1
Gustafson, J.P.2
-
70
-
-
11144296219
-
Polyploidization-induced genome variation in triticale
-
X.F. Ma, P. Fang, and J.P. Gustafson Polyploidization-induced genome variation in triticale Genome 47 2004 839 848
-
(2004)
Genome
, vol.47
, pp. 839-848
-
-
Ma, X.F.1
Fang, P.2
Gustafson, J.P.3
-
71
-
-
84872597340
-
Polyploidy and its effect on evolutionary success: Old questions revisited with new tools
-
A. Madlung Polyploidy and its effect on evolutionary success: old questions revisited with new tools Heredity (Edinb.) 110 2013 99 104
-
(2013)
Heredity (Edinb.)
, vol.110
, pp. 99-104
-
-
Madlung, A.1
-
72
-
-
12844257041
-
Genomic changes in synthetic Arabidopsis polyploids
-
A. Madlung, A.P. Tyagi, B. Watson, H.M. Jiang, T. Kagochi, R.W. Doerge, R. Martienssen, and L. Comai Genomic changes in synthetic Arabidopsis polyploids Plant J. 41 2005 221 230
-
(2005)
Plant J.
, vol.41
, pp. 221-230
-
-
Madlung, A.1
Tyagi, A.P.2
Watson, B.3
Jiang, H.M.4
Kagochi, T.5
Doerge, R.W.6
Martienssen, R.7
Comai, L.8
-
73
-
-
84862545124
-
Allopolyploidization lays the foundation for evolution of distinct populations: Evidence from analysis of synthetic Arabidopsis allohexaploids
-
S.C. Matsushita, A.P. Tyagi, G.M. Thornton, J.C. Pires, and A. Madlung Allopolyploidization lays the foundation for evolution of distinct populations: evidence from analysis of synthetic Arabidopsis allohexaploids Genetics 191 2012 535 547
-
(2012)
Genetics
, vol.191
, pp. 535-547
-
-
Matsushita, S.C.1
Tyagi, A.P.2
Thornton, G.M.3
Pires, J.C.4
Madlung, A.5
-
74
-
-
0002450482
-
The artificial synthesis of Triticum spelta
-
E.S. McFadden, and E.R. Sears The artificial synthesis of Triticum spelta Rec. Soc. Genet. Am. 13 1944 26 27
-
(1944)
Rec. Soc. Genet. Am.
, vol.13
, pp. 26-27
-
-
McFadden, E.S.1
Sears, E.R.2
-
75
-
-
77957217584
-
The origin of Triticum spelta and its free-threshing hexaploid relatives
-
E.S. McFadden, and E.R. Sears The origin of Triticum spelta and its free-threshing hexaploid relatives J. Hered. 37 1946 81 89
-
(1946)
J. Hered.
, vol.37
, pp. 81-89
-
-
McFadden, E.S.1
Sears, E.R.2
-
76
-
-
77950938640
-
Newly synthesized wheat allohexaploids display progenitor-dependent meiotic stability and aneuploidy but structural genomic additivity
-
I. Mestiri, V. Chague, A.M. Tanguy, C. Huneau, V. Huteau, H. Belcram, O. Coriton, B. Chalhoub, and J. Jahier Newly synthesized wheat allohexaploids display progenitor-dependent meiotic stability and aneuploidy but structural genomic additivity New Phytol. 186 2010 86 101
-
(2010)
New Phytol.
, vol.186
, pp. 86-101
-
-
Mestiri, I.1
Chague, V.2
Tanguy, A.M.3
Huneau, C.4
Huteau, V.5
Belcram, H.6
Coriton, O.7
Chalhoub, B.8
Jahier, J.9
-
77
-
-
33748529969
-
On the abundance of polyploids in flowering plants
-
L.A. Meyers, and D.A. Levin On the abundance of polyploids in flowering plants Evolution 60 2006 1198 1206
-
(2006)
Evolution
, vol.60
, pp. 1198-1206
-
-
Meyers, L.A.1
Levin, D.A.2
-
78
-
-
0036189284
-
Trends in site-number change of rDNA loci during polyploid evolution in Sanguisorba (Rosaceae)
-
M. Mishima, N. Ohmido, K. Fukui, and T. Yahara Trends in site-number change of rDNA loci during polyploid evolution in Sanguisorba (Rosaceae) Chromosoma 110 2002 550 558
-
(2002)
Chromosoma
, vol.110
, pp. 550-558
-
-
Mishima, M.1
Ohmido, N.2
Fukui, K.3
Yahara, T.4
-
79
-
-
0346373740
-
Discrimination of homoeologous gene expression in hexaploid wheat by SNP analysis of contigs grouped from a large number of expressed sequence tags
-
K. Mochida, Y. Yamazaki, and Y. Ogihara Discrimination of homoeologous gene expression in hexaploid wheat by SNP analysis of contigs grouped from a large number of expressed sequence tags Mol. Genet. Genomics 270 2004 371 377
-
(2004)
Mol. Genet. Genomics
, vol.270
, pp. 371-377
-
-
Mochida, K.1
Yamazaki, Y.2
Ogihara, Y.3
-
80
-
-
0000369257
-
RRNA gene activity and control of expression mediated by methylation and imprinting during embryo development in wheat x rye hybrids
-
N. Neves, J.S. Heslop-Harrison, and W. Viegas rRNA gene activity and control of expression mediated by methylation and imprinting during embryo development in wheat x rye hybrids Theor. Appl. Genet. 91 1995 529 533
-
(1995)
Theor. Appl. Genet.
, vol.91
, pp. 529-533
-
-
Neves, N.1
Heslop-Harrison, J.S.2
Viegas, W.3
-
81
-
-
79959845558
-
Cis- and trans-regulation of miR163 and target genes confers natural variation of secondary metabolites in two Arabidopsis species and their allopolyploids
-
D.W. Ng, C. Zhang, M. Miller, G. Palmer, M. Whiteley, D. Tholl, and Z.J. Chen Cis- and trans-regulation of miR163 and target genes confers natural variation of secondary metabolites in two Arabidopsis species and their allopolyploids Plant Cell 23 2011 1729 1740
-
(2011)
Plant Cell
, vol.23
, pp. 1729-1740
-
-
Ng, D.W.1
Zhang, C.2
Miller, M.3
Palmer, G.4
Whiteley, M.5
Tholl, D.6
Chen, Z.J.7
-
82
-
-
84862777313
-
Big roles for small RNAs in polyploidy, hybrid vigor, and hybrid incompatibility
-
D.W. Ng, J. Lu, and Z.J. Chen Big roles for small RNAs in polyploidy, hybrid vigor, and hybrid incompatibility Curr. Opin. Plant Biol. 15 2012 154 161
-
(2012)
Curr. Opin. Plant Biol.
, vol.15
, pp. 154-161
-
-
Ng, D.W.1
Lu, J.2
Chen, Z.J.3
-
83
-
-
0035543132
-
Genotypic variation in tetraploid wheat affecting homoeologous pairing in hybrids with Aegilops peregrina
-
H. Ozkan, and M. Feldman Genotypic variation in tetraploid wheat affecting homoeologous pairing in hybrids with Aegilops peregrina Genome 44 2001 1000 1006
-
(2001)
Genome
, vol.44
, pp. 1000-1006
-
-
Ozkan, H.1
Feldman, M.2
-
84
-
-
0038338886
-
Nonadditive changes in genome size during allopolyploidization in the wheat (Aegilops-Triticum) group
-
H. Ozkan, M. Tuna, and K. Arumuganathan Nonadditive changes in genome size during allopolyploidization in the wheat (Aegilops-Triticum) group J. Hered. 94 2003 260 264
-
(2003)
J. Hered.
, vol.94
, pp. 260-264
-
-
Ozkan, H.1
Tuna, M.2
Arumuganathan, K.3
-
85
-
-
53349160131
-
A physical map of the 1-gigabase bread wheat chromosome 3B
-
E. Paux, P. Sourdille, J. Salse, C. Saintenac, F. Choulet, P. Leroy, A. Korol, M. Michalak, S. Kianian, and W. Spielmeyer A physical map of the 1-gigabase bread wheat chromosome 3B Science 322 2008 101
-
(2008)
Science
, vol.322
, pp. 101
-
-
Paux, E.1
Sourdille, P.2
Salse, J.3
Saintenac, C.4
Choulet, F.5
Leroy, P.6
Korol, A.7
Michalak, M.8
Kianian, S.9
Spielmeyer, W.10
-
86
-
-
80052262008
-
Domestication evolution, genetics and genomics in wheat
-
J.H.H. Peng, D.F. Sun, and E. Nevo Domestication evolution, genetics and genomics in wheat Mol. Breed. 28 2011 281 301
-
(2011)
Mol. Breed.
, vol.28
, pp. 281-301
-
-
Peng, J.H.H.1
Sun, D.F.2
Nevo, E.3
-
87
-
-
85048671720
-
Genome interplay in the grain transcriptome of hexaploid bread wheat
-
M. Pfeifer, K.G. Kugler, S.R. Sandve, B.J. Zhan, H.D. Rudi, T.R. Hvidsten Consortium, I.W.G.S K.F.X. Mayer, and O.-A. Olsen Genome interplay in the grain transcriptome of hexaploid bread wheat Science 345 2014 1250091
-
(2014)
Science
, vol.345
, pp. 1250091
-
-
Pfeifer, M.1
Kugler, K.G.2
Sandve, S.R.3
Zhan, B.J.4
Rudi, H.D.5
Hvidsten, T.R.6
Mayer, K.F.X.7
Olsen, O.-A.8
-
88
-
-
84890316359
-
Wheat syntenome unveils new evidences of contrasted evolutionary plasticity between paleo- and neoduplicated subgenomes
-
C. Pont, F. Murat, S. Guizard, R. Flores, S. Foucrier, Y. Bidet, U.M. Quraishi, M. Alaux, D. Jaroslav, and T. Fahima Wheat syntenome unveils new evidences of contrasted evolutionary plasticity between paleo- and neoduplicated subgenomes Plant J. 76 2013 1030 1044
-
(2013)
Plant J.
, vol.76
, pp. 1030-1044
-
-
Pont, C.1
Murat, F.2
Guizard, S.3
Flores, R.4
Foucrier, S.5
Bidet, Y.6
Quraishi, U.M.7
Alaux, M.8
Jaroslav, D.9
Fahima, T.10
-
89
-
-
11144224315
-
Chromosomal locus rearrangements are a rapid response to formation of the allotetraploid Arabidopsis suecica genome
-
O. Pontes, N. Neves, M. Silva, M.S. Lewis, A. Madlung, L. Comai, W. Viegas, and C.S. Pikaard Chromosomal locus rearrangements are a rapid response to formation of the allotetraploid Arabidopsis suecica genome Proc. Natl. Acad. Sci. USA 101 2004 18240 18245
-
(2004)
Proc. Natl. Acad. Sci. USA
, vol.101
, pp. 18240-18245
-
-
Pontes, O.1
Neves, N.2
Silva, M.3
Lewis, M.S.4
Madlung, A.5
Comai, L.6
Viegas, W.7
Pikaard, C.S.8
-
90
-
-
0036845822
-
Splitting pairs: The diverging fates of duplicated genes
-
V.E. Prince, and F.B. Pickett Splitting pairs: the diverging fates of duplicated genes Nat. Rev. Genet. 3 2002 827 837
-
(2002)
Nat. Rev. Genet.
, vol.3
, pp. 827-837
-
-
Prince, V.E.1
Pickett, F.B.2
-
91
-
-
62549107556
-
Nonadditive expression of homoeologous genes is established upon polyploidization in hexaploid wheat
-
M. Pumphrey, J. Bai, D. Laudencia-Chingcuanco, O. Anderson, and B.S. Gill Nonadditive expression of homoeologous genes is established upon polyploidization in hexaploid wheat Genetics 181 2009 1147 1157
-
(2009)
Genetics
, vol.181
, pp. 1147-1157
-
-
Pumphrey, M.1
Bai, J.2
Laudencia-Chingcuanco, D.3
Anderson, O.4
Gill, B.S.5
-
92
-
-
84862820384
-
Global transgenerational gene expression dynamics in two newly synthesized allohexaploid wheat (Triticum aestivum) lines
-
B. Qi, W. Huang, B. Zhu, X. Zhong, J. Guo, N. Zhao, C. Xu, H. Zhang, J. Pang, and F. Han Global transgenerational gene expression dynamics in two newly synthesized allohexaploid wheat (Triticum aestivum) lines BMC Biol. 10 2012 3
-
(2012)
BMC Biol.
, vol.10
, pp. 3
-
-
Qi, B.1
Huang, W.2
Zhu, B.3
Zhong, X.4
Guo, J.5
Zhao, N.6
Xu, C.7
Zhang, H.8
Pang, J.9
Han, F.10
-
93
-
-
56349088536
-
Aneuploidy underlies rapid adaptive evolution of yeast cells deprived of a conserved cytokinesis motor
-
G. Rancati, N. Pavelka, B. Fleharty, A. Noll, R. Trimble, K. Walton, A. Perera, K. Staehling-Hampton, C.W. Seidel, and R. Li Aneuploidy underlies rapid adaptive evolution of yeast cells deprived of a conserved cytokinesis motor Cell 135 2008 879 893
-
(2008)
Cell
, vol.135
, pp. 879-893
-
-
Rancati, G.1
Pavelka, N.2
Fleharty, B.3
Noll, A.4
Trimble, R.5
Walton, K.6
Perera, A.7
Staehling-Hampton, K.8
Seidel, C.W.9
Li, R.10
-
94
-
-
66149174929
-
Genomic expression dominance in allopolyploids
-
R.A. Rapp, J.A. Udall, and J.F. Wendel Genomic expression dominance in allopolyploids BMC Biol. 7 2009 18
-
(2009)
BMC Biol.
, vol.7
, pp. 18
-
-
Rapp, R.A.1
Udall, J.A.2
Wendel, J.F.3
-
95
-
-
84907342844
-
Doubling down on genomes: Polyploidy and crop plants
-
S. Renny-Byfield, and J.F. Wendel Doubling down on genomes: polyploidy and crop plants Botany 101 2014 1711 1725
-
(2014)
Botany
, vol.101
, pp. 1711-1725
-
-
Renny-Byfield, S.1
Wendel, J.F.2
-
96
-
-
75849147404
-
Gene expression analysis at the intersection of ploidy and hybridity in maize
-
N.C. Riddle, H. Jiang, L. An, R.W. Doerge, and J.A. Birchler Gene expression analysis at the intersection of ploidy and hybridity in maize Theor. Appl. Genet. 120 2010 341 353
-
(2010)
Theor. Appl. Genet.
, vol.120
, pp. 341-353
-
-
Riddle, N.C.1
Jiang, H.2
An, L.3
Doerge, R.W.4
Birchler, J.A.5
-
98
-
-
0027497590
-
Correlation between the size of the intergenic regulatory region, the status of cytosine methylation of rRNA genes and nucleolar expression in wheat
-
R. Sardana, M. O'Dell, and R. Flavell Correlation between the size of the intergenic regulatory region, the status of cytosine methylation of rRNA genes and nucleolar expression in wheat Mol. Gen. Genet. 236 1993 155 162
-
(1993)
Mol. Gen. Genet.
, vol.236
, pp. 155-162
-
-
Sardana, R.1
O'Dell, M.2
Flavell, R.3
-
99
-
-
84877658412
-
Progress toward understanding heterosis in crop plants
-
P.S. Schnable, and N.M. Springer Progress toward understanding heterosis in crop plants Annu. Rev. Plant Biol. 64 2013 71 88
-
(2013)
Annu. Rev. Plant Biol.
, vol.64
, pp. 71-88
-
-
Schnable, P.S.1
Springer, N.M.2
-
100
-
-
79952744855
-
Differentiation of the maize subgenomes by genome dominance and both ancient and ongoing gene loss
-
J.C. Schnable, N.M. Springer, and M. Freeling Differentiation of the maize subgenomes by genome dominance and both ancient and ongoing gene loss Proc. Natl. Acad. Sci. USA 108 2011 4069 4074
-
(2011)
Proc. Natl. Acad. Sci. USA
, vol.108
, pp. 4069-4074
-
-
Schnable, J.C.1
Springer, N.M.2
Freeling, M.3
-
101
-
-
0025109002
-
Position-dependent NOR activity in barley
-
I. Schubert, and G. Kunzel Position-dependent NOR activity in barley Chromosoma 99 1990 352 359
-
(1990)
Chromosoma
, vol.99
, pp. 352-359
-
-
Schubert, I.1
Kunzel, G.2
-
102
-
-
0034866855
-
Sequence elimination and cytosine methylation are rapid and reproducible responses of the genome to wide hybridization and allopolyploidy in wheat
-
H. Shaked, K. Kashkush, H. Ozkan, M. Feldman, and A.A. Levy Sequence elimination and cytosine methylation are rapid and reproducible responses of the genome to wide hybridization and allopolyploidy in wheat Plant Cell 13 2001 1749 1759
-
(2001)
Plant Cell
, vol.13
, pp. 1749-1759
-
-
Shaked, H.1
Kashkush, K.2
Ozkan, H.3
Feldman, M.4
Levy, A.A.5
-
103
-
-
84864834178
-
Cis- and trans-regulatory divergence between progenitor species determines gene-expression novelty in Arabidopsis allopolyploids
-
X. Shi, D.W. Ng, C. Zhang, L. Comai, W. Ye, and Z.J. Chen Cis- and trans-regulatory divergence between progenitor species determines gene-expression novelty in Arabidopsis allopolyploids Nat. Commun. 3 2012 950
-
(2012)
Nat. Commun.
, vol.3
, pp. 950
-
-
Shi, X.1
Ng, D.W.2
Zhang, C.3
Comai, L.4
Ye, W.5
Chen, Z.J.6
-
104
-
-
84924269561
-
What is "heterosis"?
-
G.H. Shull What is "heterosis"? Genetics 33 1948 439 446
-
(1948)
Genetics
, vol.33
, pp. 439-446
-
-
Shull, G.H.1
-
105
-
-
80051740988
-
The emergence of Ug99 races of the stem rust fungus is a threat to world wheat production
-
R.P. Singh, D.P. Hodson, J. Huerta-Espino, Y. Jin, S. Bhavani, P. Njau, S. Herrera-Foessel, P.K. Singh, S. Singh, and V. Govindan The emergence of Ug99 races of the stem rust fungus is a threat to world wheat production Annu. Rev. Phytopathol. 49 2011 465 481
-
(2011)
Annu. Rev. Phytopathol.
, vol.49
, pp. 465-481
-
-
Singh, R.P.1
Hodson, D.P.2
Huerta-Espino, J.3
Jin, Y.4
Bhavani, S.5
Njau, P.6
Herrera-Foessel, S.7
Singh, P.K.8
Singh, S.9
Govindan, V.10
-
106
-
-
84893271829
-
The role of microRNAs in the control of flowering time
-
E. Spanudakis, and S. Jackson The role of microRNAs in the control of flowering time J. Exp. Bot. 65 2014 365 380
-
(2014)
J. Exp. Bot.
, vol.65
, pp. 365-380
-
-
Spanudakis, E.1
Jackson, S.2
-
108
-
-
0025151918
-
Genetic-control of 1R nucleolus organizer region expression in the presence of wheat genomes
-
R. Vieira, A. Queiroz, L. Morais, A. Barao, T. Mellosampayo, and W. Viegas Genetic-control of 1R nucleolus organizer region expression in the presence of wheat genomes Genome 33 1990 713 718
-
(1990)
Genome
, vol.33
, pp. 713-718
-
-
Vieira, R.1
Queiroz, A.2
Morais, L.3
Barao, A.4
Mellosampayo, T.5
Viegas, W.6
-
109
-
-
60149086351
-
Origin, biogenesis, and activity of plant microRNAs
-
O. Voinnet Origin, biogenesis, and activity of plant microRNAs Cell 136 2009 669 687
-
(2009)
Cell
, vol.136
, pp. 669-687
-
-
Voinnet, O.1
-
110
-
-
4344642732
-
Stochastic and epigenetic changes of gene expression in Arabidopsis polyploids
-
J. Wang, H.-S. Lee, L. Tian, M. Chen, J.J. Lee, A. Madlung, L. Comai, and Z.J. Chen Stochastic and epigenetic changes of gene expression in Arabidopsis polyploids Genetics 167 2004 1961 1973
-
(2004)
Genetics
, vol.167
, pp. 1961-1973
-
-
Wang, J.1
Lee, H.-S.2
Tian, L.3
Chen, M.4
Lee, J.J.5
Madlung, A.6
Comai, L.7
Chen, Z.J.8
-
111
-
-
33644762929
-
Genome-wide nonadditive gene regulation in Arabidopsis allotetraploids
-
J. Wang, L. Tian, H.S. Lee, N.E. Wei, H. Jiang, B. Watson, A. Madlung, T.C. Osborn, R.W. Doerge, and L. Comai Genome-wide nonadditive gene regulation in Arabidopsis allotetraploids Genetics 172 2006 507 517
-
(2006)
Genetics
, vol.172
, pp. 507-517
-
-
Wang, J.1
Tian, L.2
Lee, H.S.3
Wei, N.E.4
Jiang, H.5
Watson, B.6
Madlung, A.7
Osborn, T.C.8
Doerge, R.W.9
Comai, L.10
-
112
-
-
84896704687
-
Polyploids as a 'model system' for the study of heterosis
-
J.D. Washburn, and J.A. Birchler Polyploids as a 'model system' for the study of heterosis Plant Reprod. 27 2014 1 5
-
(2014)
Plant Reprod.
, vol.27
, pp. 1-5
-
-
Washburn, J.D.1
Birchler, J.A.2
-
113
-
-
70350029271
-
Novel microRNAs uncovered by deep sequencing of small RNA transcriptomes in bread wheat (Triticum aestivum L.) and Brachypodium distachyon (L.) Beauv
-
B. Wei, T. Cai, R. Zhang, A. Li, N. Huo, S. Li, Y.Q. Gu, J. Vogel, J. Jia, and Y. Qi Novel microRNAs uncovered by deep sequencing of small RNA transcriptomes in bread wheat (Triticum aestivum L.) and Brachypodium distachyon (L.) Beauv Funct. Integr. Genomic. 9 2009 499 511
-
(2009)
Funct. Integr. Genomic.
, vol.9
, pp. 499-511
-
-
Wei, B.1
Cai, T.2
Zhang, R.3
Li, A.4
Huo, N.5
Li, S.6
Gu, Y.Q.7
Vogel, J.8
Jia, J.9
Qi, Y.10
-
114
-
-
0028917850
-
Bidirectional interlocus concerted evolution following allopolyploid speciation in cotton (Gossypium)
-
J.F. Wendel, A. Schnabel, and T. Seelanan Bidirectional interlocus concerted evolution following allopolyploid speciation in cotton (Gossypium) Proc. Natl. Acad. Sci. USA 92 1995 280 284
-
(1995)
Proc. Natl. Acad. Sci. USA
, vol.92
, pp. 280-284
-
-
Wendel, J.F.1
Schnabel, A.2
Seelanan, T.3
-
115
-
-
79959839889
-
Frequent gene movement and pseudogene evolution is common to the large and complex genomes of wheat, barley, and their relatives
-
T. Wicker, K.F.X. Mayer, H. Gundlach, M. Martis, B. Steuernagel, U. Scholz, H. Šimková, M. Kubaláková, C.F. Frédéric, and S. Taudien Frequent gene movement and pseudogene evolution is common to the large and complex genomes of wheat, barley, and their relatives Plant Cell 23 2011 1706 1718
-
(2011)
Plant Cell
, vol.23
, pp. 1706-1718
-
-
Wicker, T.1
Mayer, K.F.X.2
Gundlach, H.3
Martis, M.4
Steuernagel, B.5
Scholz, U.6
Šimková, H.7
Kubaláková, M.8
Frédéric, C.F.9
Taudien, S.10
-
116
-
-
0035344021
-
Yesterday's polyploids and the mystery of diploidization
-
K.H. Wolfe Yesterday's polyploids and the mystery of diploidization Nat. Rev. Genet. 2 2001 333 341
-
(2001)
Nat. Rev. Genet.
, vol.2
, pp. 333-341
-
-
Wolfe, K.H.1
-
117
-
-
69549117029
-
The frequency of polyploid speciation in vascular plants
-
T.E. Wood, N. Takebayashic, M.S. Barker, I. Mayrosee, P.B. Greenspoond, and L.H. Rieseberg The frequency of polyploid speciation in vascular plants Proc. Natl. Acad. Sci. USA 106 2009 13875 13879
-
(2009)
Proc. Natl. Acad. Sci. USA
, vol.106
, pp. 13875-13879
-
-
Wood, T.E.1
Takebayashic, N.2
Barker, M.S.3
Mayrosee, I.4
Greenspoond, P.B.5
Rieseberg, L.H.6
-
118
-
-
79956351636
-
Homoeologous shuffling and chromosome compensation maintain genome balance in resynthesized allopolyploid Brassica napus
-
Z. Xiong, R.T. Gaeta, and J.C. Pires Homoeologous shuffling and chromosome compensation maintain genome balance in resynthesized allopolyploid Brassica napus Proc. Natl. Acad. Sci. USA 108 2011 7908 7913
-
(2011)
Proc. Natl. Acad. Sci. USA
, vol.108
, pp. 7908-7913
-
-
Xiong, Z.1
Gaeta, R.T.2
Pires, J.C.3
-
119
-
-
78651388093
-
Massive alterations of the methylation patterns around DNA transposons in the first four generations of a newly formed wheat allohexaploid
-
B. Yaakov, and K. Kashkush Massive alterations of the methylation patterns around DNA transposons in the first four generations of a newly formed wheat allohexaploid Genome 54 2011 42 49
-
(2011)
Genome
, vol.54
, pp. 42-49
-
-
Yaakov, B.1
Kashkush, K.2
-
120
-
-
79959256918
-
Methylation, transcription, and rearrangements of transposable elements in synthetic allopolyploids
-
B. Yaakov, and K. Kashkush Methylation, transcription, and rearrangements of transposable elements in synthetic allopolyploids Int. J. Plant Genomics 2011 2011 569826
-
(2011)
Int. J. Plant Genomics
, vol.2011
, pp. 569826
-
-
Yaakov, B.1
Kashkush, K.2
-
121
-
-
70349282119
-
Synthetic hexaploid wheat and its utilization for wheat genetic improvement in China
-
W. Yang, D. Liu, J. Li, L. Zhang, H. Wei, X. Hu, Y. Zheng, Z. He, and Y. Zou Synthetic hexaploid wheat and its utilization for wheat genetic improvement in China J. Genet. Genomics 36 2009 539 546
-
(2009)
J. Genet. Genomics
, vol.36
, pp. 539-546
-
-
Yang, W.1
Liu, D.2
Li, J.3
Zhang, L.4
Wei, H.5
Hu, X.6
Zheng, Y.7
He, Z.8
Zou, Y.9
-
122
-
-
84905995450
-
Evolution of physiological responses to salt stress in hexaploid wheat
-
C.W. Yang, L. Zhao, H.K. Zhang, Z.Z. Yang, H. Wang, S.S. Wen, C.Y. Zhang, S. Rustgi, D.V. Wettstein, and B. Liu Evolution of physiological responses to salt stress in hexaploid wheat Proc. Natl. Acad. Sci. USA 111 2014 11882 11887
-
(2014)
Proc. Natl. Acad. Sci. USA
, vol.111
, pp. 11882-11887
-
-
Yang, C.W.1
Zhao, L.2
Zhang, H.K.3
Yang, Z.Z.4
Wang, H.5
Wen, S.S.6
Zhang, C.Y.7
Rustgi, S.8
Wettstein, D.V.9
Liu, B.10
-
124
-
-
77950460285
-
Frequent occurrence of unreduced gametes in Triticum turgidum-Aegilops tauschii hybrids
-
L.Q. Zhang, D.C. Liu, Y.L. Zheng, Z.H. Yan, S.F. Dai, Y.F. Li, Q. Jiang, Y.Q. Ye, and Y. Yen Frequent occurrence of unreduced gametes in Triticum turgidum-Aegilops tauschii hybrids Euphytica 172 2010 285 294
-
(2010)
Euphytica
, vol.172
, pp. 285-294
-
-
Zhang, L.Q.1
Liu, D.C.2
Zheng, Y.L.3
Yan, Z.H.4
Dai, S.F.5
Li, Y.F.6
Jiang, Q.7
Ye, Y.Q.8
Yen, Y.9
-
125
-
-
84874493629
-
Persistent whole-chromosome aneuploidy is generally associated with nascent allohexaploid wheat
-
H. Zhang, Y. Bian, X. Gou, B. Zhu, C. Xu, B. Qi, N. Li, S. Rustgi, H. Zhou, and F. Han Persistent whole-chromosome aneuploidy is generally associated with nascent allohexaploid wheat Proc. Natl. Acad. Sci. USA 110 2013 3447 3452
-
(2013)
Proc. Natl. Acad. Sci. USA
, vol.110
, pp. 3447-3452
-
-
Zhang, H.1
Bian, Y.2
Gou, X.3
Zhu, B.4
Xu, C.5
Qi, B.6
Li, N.7
Rustgi, S.8
Zhou, H.9
Han, F.10
-
126
-
-
84888316492
-
Intrinsic karyotype stability and gene copy number variations may have laid the foundation for tetraploid wheat formation
-
H.K. Zhang, Y. Bian, X.W. Gou, Y.Z. Dong, S. Rustgi, B.J. Zhang, C.M. Xu, N. Li, B. Qi, and F.P. Han Intrinsic karyotype stability and gene copy number variations may have laid the foundation for tetraploid wheat formation Proc. Natl. Acad. Sci. USA 110 2013 19466 19471
-
(2013)
Proc. Natl. Acad. Sci. USA
, vol.110
, pp. 19466-19471
-
-
Zhang, H.K.1
Bian, Y.2
Gou, X.W.3
Dong, Y.Z.4
Rustgi, S.5
Zhang, B.J.6
Xu, C.M.7
Li, N.8
Qi, B.9
Han, F.P.10
-
127
-
-
84907361931
-
Evolution of the BBAA component of bread wheat during its history at the allohexaploid level
-
H.K. Zhang, B. Zhu, B. Qi, X.W. Gou, Y.Z. Dong, C.M. Xu, B.J. Zhang, W. Huang, C. Liu, and X.T. Wang Evolution of the BBAA component of bread wheat during its history at the allohexaploid level Plant Cell 26 2014 2761 2776
-
(2014)
Plant Cell
, vol.26
, pp. 2761-2776
-
-
Zhang, H.K.1
Zhu, B.2
Qi, B.3
Gou, X.W.4
Dong, Y.Z.5
Xu, C.M.6
Zhang, B.J.7
Huang, W.8
Liu, C.9
Wang, X.T.10
-
128
-
-
80052000625
-
Chromosomal and genome-wide molecular changes associated with initial stages of allohexaploidization in wheat can be transit and incidental
-
N. Zhao, L. Xu, B. Zhu, M. Li, H. Zhang, B. Qi, C. Xu, F. Han, and B. Liu Chromosomal and genome-wide molecular changes associated with initial stages of allohexaploidization in wheat can be transit and incidental Genome 54 2011 692 699
-
(2011)
Genome
, vol.54
, pp. 692-699
-
-
Zhao, N.1
Xu, L.2
Zhu, B.3
Li, M.4
Zhang, H.5
Qi, B.6
Xu, C.7
Han, F.8
Liu, B.9
-
129
-
-
79960125436
-
Extensive and heritable epigenetic remodeling and genetic stability accompany allohexaploidization of wheat
-
N. Zhao, B. Zhu, M. Li, L. Wang, L. Xu, H. Zhang, S. Zheng, B. Qi, F. Han, and B. Liu Extensive and heritable epigenetic remodeling and genetic stability accompany allohexaploidization of wheat Genetics 188 2011 499 510
-
(2011)
Genetics
, vol.188
, pp. 499-510
-
-
Zhao, N.1
Zhu, B.2
Li, M.3
Wang, L.4
Xu, L.5
Zhang, H.6
Zheng, S.7
Qi, B.8
Han, F.9
Liu, B.10
-
130
-
-
84885373147
-
A role for a dioxygenase in auxin metabolism and reproductive development in rice
-
Z.G. Zhao, Y.H. Zhang, X. Liu, X. Zhang, S.C. Liu, X.W. Yu, Y.L. Ren, X.M. Zheng, K.N. Zhou, and L. Jiang A role for a dioxygenase in auxin metabolism and reproductive development in rice Dev. Cell 27 2013 113 122
-
(2013)
Dev. Cell
, vol.27
, pp. 113-122
-
-
Zhao, Z.G.1
Zhang, Y.H.2
Liu, X.3
Zhang, X.4
Liu, S.C.5
Yu, X.W.6
Ren, Y.L.7
Zheng, X.M.8
Zhou, K.N.9
Jiang, L.10
|