-
1
-
-
0032487442
-
Transcription sites are not correlated with chromosome territories in wheat nuclei
-
AbranchesR, Beven AF, Aragón-Alcaide L, Shaw PJ (1998) Transcription sites are not correlated with chromosome territories in wheat nuclei. J Cell Biol 143:5-12
-
(1998)
J Cell Biol
, vol.143
, pp. 5-12
-
-
Abranches, R.1
Beven, A.F.2
Aragón-Alcaide, L.3
Shaw, P.J.4
-
2
-
-
58549087805
-
Incremental steps toward incompatibility revealed by Arabidopsis epistatic interactions modulating salicylic acid pathway activation
-
Alcazar R, Garcia AV, Parker JE, Reymond M (2009) Incremental steps toward incompatibility revealed by Arabidopsis epistatic interactions modulating salicylic acid pathway activation. Proc Natl Acad Sci USA 106:334-339
-
(2009)
Proc Natl Acad Sci USA
, vol.106
, pp. 334-339
-
-
Alcazar, R.1
Garcia, A.V.2
Parker, J.E.3
Reymond, M.4
-
4
-
-
77954893229
-
Spatio-temporal patterns of genome evolution in allotetraploid species of the genus Oryza
-
Ammiraju JS, Fan C, Yu Y, Song X, Cranston KA, Pontaroli AC, Lu F, Sanyal A, JiangN, Rambo T, Currie J, ColluraK, Talag J, Bennetzen JL, Chen M, Jackson S, Wing RA (2010) Spatio-temporal patterns of genome evolution in allotetraploid species of the genus Oryza. Plant J 63:430-442
-
(2010)
Plant J
, vol.63
, pp. 430-442
-
-
Ammiraju, J.S.1
Fan, C.2
Yu, Y.3
Song, X.4
Cranston, K.A.5
Pontaroli, A.C.6
Lu, F.7
Sanyal, A.8
Jiang, N.9
Rambo, T.10
Currie, J.11
Collura, K.12
Talag, J.13
Bennetzen, J.L.14
Chen, M.15
Jackson, S.16
Wing, R.A.17
-
5
-
-
0345103307
-
Variable genome composition in Triticum × Leymus amphiploids
-
Anamthawat-Jonsson K (1999) Variable genome composition in Triticum × Leymus amphiploids. Theor Appl Genet 99:1087-1093
-
(1999)
Theor Appl Genet
, vol.99
, pp. 1087-1093
-
-
Anamthawat-Jonsson, K.1
-
7
-
-
0035211572
-
Nucleolus-associated telomere clustering precedes meiotic chromosome synapsis in Arabidopsis thaliana
-
Armstrong SJ, Franklin FCH, Jones GH (2001) Nucleolus-associated telomere clustering precedes meiotic chromosome synapsis in Arabidopsis thaliana. J Cell Sci 114:4207-4217
-
(2001)
J Cell Sci
, vol.114
, pp. 4207-4217
-
-
Armstrong, S.J.1
Franklin, F.C.H.2
Jones, G.H.3
-
8
-
-
36549053175
-
A genomic view of introgression and hybrid speciation
-
Baack EJ, Rieseberg LH (2007) A genomic view of introgression and hybrid speciation. Curr Opin Genet Dev 17:513-518
-
(2007)
Curr Opin Genet Dev
, vol.17
, pp. 513-518
-
-
Baack, E.J.1
Rieseberg, L.H.2
-
9
-
-
33745373606
-
Primate segmental duplications: Crucibles of evolution diversity and disease
-
Bailey JA, Eichler EE (2006) Primate segmental duplications: crucibles of evolution diversity and disease. Nat Rev Genet 7:552-564
-
(2006)
Nat Rev Genet
, vol.7
, pp. 552-564
-
-
Bailey, J.A.1
Eichler, E.E.2
-
10
-
-
62349104354
-
Widespread evidence for horizontal transfer of transposable elements across Drosophila genomes
-
Bartolome C, Bello X, Maside X (2009) Widespread evidence for horizontal transfer of transposable elements across Drosophila genomes. Genome Biol 10:R22
-
(2009)
Genome Biol
, vol.10
, pp. R22
-
-
Bartolome, C.1
Bello, X.2
Maside, X.3
-
11
-
-
77950355575
-
Cooperation of multiple chromatin modifications can generate unanticipated stability of epigenetic states in Arabidopsis
-
Baubec T, Dinh HQ, Pecinka A, Rakic B, Rozhon W, Wohlrab B, von Haeseler A, Mittelsten Scheid O (2010) Cooperation of multiple chromatin modifications can generate unanticipated stability of epigenetic states in Arabidopsis. Plant Cell 22:34-47
-
(2010)
Plant Cell
, vol.22
, pp. 34-47
-
-
Baubec, T.1
Dinh, H.Q.2
Pecinka, A.3
Rakic, B.4
Rozhon, W.5
Wohlrab, B.6
von Haeseler, A.7
Mittelsten Scheid, O.8
-
12
-
-
0017258605
-
The time, rate and mechanism of chromosome elimination in Hordeum hybrids
-
BennettMD, Finch RA, Barclay IR (1976) The time, rate and mechanism of chromosome elimination in Hordeum hybrids. Chromosoma 54:175-200
-
(1976)
Chromosoma
, vol.54
, pp. 175-200
-
-
Bennett, M.D.1
Finch, R.A.2
Barclay, I.R.3
-
13
-
-
79952907997
-
Size matters in Triticeae polyploids: Larger genomes have higher remodelling
-
Bento M, Gustafson JP, Viegas W, Silva M (2011) Size matters in Triticeae polyploids: larger genomes have higher remodelling. Genome 54:175-183
-
(2011)
Genome
, vol.54
, pp. 175-183
-
-
Bento, M.1
Gustafson, J.P.2
Viegas, W.3
Silva, M.4
-
14
-
-
70549085367
-
Too much of a good thing? Hybrid necrosis as a byproduct of plant immune system diversification
-
Bomblies K (2009) Too much of a good thing? Hybrid necrosis as a byproduct of plant immune system diversification. Botany-Botanique 87:1013-1022
-
(2009)
Botany-Botanique
, vol.87
, pp. 1013-1022
-
-
Bomblies, K.1
-
15
-
-
34548676152
-
Autoimmune response as a mechanism for a Dobzhansky-Muller-type incompatibility syndrome in plants
-
Bomblies K, Lempe J, Epple P, Warthmann N, Lanz C, Dangl JL, Weigel D (2007) Autoimmune response as a mechanism for a Dobzhansky-Muller-type incompatibility syndrome in plants. PLoS Biol 5:1962-1972
-
(2007)
PLoS Biol
, vol.5
, pp. 1962-1972
-
-
Bomblies, K.1
Lempe, J.2
Epple, P.3
Warthmann, N.4
Lanz, C.5
Dangl, J.L.6
Weigel, D.7
-
16
-
-
0001169778
-
Die Blastomerenkerne von Ascaris megalocephala und die Theorie der Chromosomenindividualität
-
Boveri T (1909) Die Blastomerenkerne von Ascaris megalocephala und die Theorie der Chromosomenindividualität. Arch Zellforsch 3:181-268
-
(1909)
Arch Zellforsch
, vol.3
, pp. 181-268
-
-
Boveri, T.1
-
17
-
-
34247107485
-
Transgenerational changes in the genome stability and methylation in pathogen-infected plants (virus-induced plant genome instability)
-
Boyko A, Kathiria P, Zemp FJ, Yao Y, Pogribny I, Kovalchuk I (2007) Transgenerational changes in the genome stability and methylation in pathogen-infected plants (virus-induced plant genome instability). Nucleic Acids Res 35:1714-1725
-
(2007)
Nucleic Acids Res
, vol.35
, pp. 1714-1725
-
-
Boyko, A.1
Kathiria, P.2
Zemp, F.J.3
Yao, Y.4
Pogribny, I.5
Kovalchuk, I.6
-
18
-
-
79957782710
-
Genome instability and epigenetic modification - heritable responses to environmental stress?
-
Boyko A, Kovalchuk I (2011) Genome instability and epigenetic modification - heritable responses to environmental stress? Curr Op Plant Biol 14:260-266
-
(2011)
Curr Op Plant Biol
, vol.14
, pp. 260-266
-
-
Boyko, A.1
Kovalchuk, I.2
-
19
-
-
77649277105
-
Epigenetic chromatin modifications in Brassica genomes
-
Braszewska-Zalewska A, Bernas T, Maluszynska J (2009) Epigenetic chromatin modifications in Brassica genomes. Genome 53:203-210
-
(2009)
Genome
, vol.53
, pp. 203-210
-
-
Braszewska-Zalewska, A.1
Bernas, T.2
Maluszynska, J.3
-
20
-
-
68349127317
-
Does hybridization between divergent progenitors drive whole-genome duplication?
-
Buggs RJA, Soltis PS, Soltis DE (2009) Does hybridization between divergent progenitors drive whole-genome duplication? Mol Ecol 18:3334-3339
-
(2009)
Mol Ecol
, vol.18
, pp. 3334-3339
-
-
Buggs, R.J.A.1
Soltis, P.S.2
Soltis, D.E.3
-
21
-
-
0345086449
-
Chromosome substitutions and recombination in the amphiploid Lolium perenne × Festuca pratensis cv. Prior (2n 1/4 4x 1/4 28)
-
Canter PH, Pašakinskienė I, Jones RN, Humphreys MW (1999) Chromosome substitutions and recombination in the amphiploid Lolium perenne × Festuca pratensis cv. Prior (2n 1/4 4x 1/4 28). Theor Appl Genet 98:809-814
-
(1999)
Theor Appl Genet
, vol.98
, pp. 809-814
-
-
Canter, P.H.1
Pašakinskienė, I.2
Jones, R.N.3
Humphreys, M.W.4
-
22
-
-
0035895502
-
The human transcriptome map: Clustering of highly expressed genes in chromosomal domains
-
Caron H, van Schaik B, van der Mee M, Baas F, Riggins G, van Sluis P, Hermus MC, van Asperen R, Boon K, Voûte PA, Heisterkamp S, van Kampen A, Versteeg R (2001) The human transcriptome map: clustering of highly expressed genes in chromosomal domains. Science 291:1289-1292
-
(2001)
Science
, vol.291
, pp. 1289-1292
-
-
Caron, H.1
van Schaik, B.2
van der Mee, M.3
Baas, F.4
Riggins, G.5
van Sluis, P.6
Hermus, M.C.7
van Asperen, R.8
Boon, K.9
Voûte, P.A.10
Heisterkamp, S.11
van Kampen, A.12
Versteeg, R.13
-
23
-
-
78650334271
-
Homoeolog-specific retention and use in allotetraploid Arabidopsis suecica depends on parent of origin and network partners
-
Chang PL, Dilkes BP, McMahon M, Comai L, Nuzhdin CL (2010) Homoeolog-specific retention and use in allotetraploid Arabidopsis suecica depends on parent of origin and network partners. Genome Biol 11:R125
-
(2010)
Genome Biol
, vol.11
-
-
Chang, P.L.1
Dilkes, B.P.2
McMahon, M.3
Comai, L.4
Nuzhdin, C.L.5
-
24
-
-
58149344008
-
Dynamics and differential proliferation of transposable elements during the evolution of the B and A genomes of wheat
-
Charles M, Belcram H, Just J, Huneau C, Viollet A, Couloux A, Segurens B, Carter M, Huteau V, Coriton O, Appels R, Samain S, Chalhoub B (2008) Dynamics and differential proliferation of transposable elements during the evolution of the B and A genomes of wheat. Genetics 180:1071-1086
-
(2008)
Genetics
, vol.180
, pp. 1071-1086
-
-
Charles, M.1
Belcram, H.2
Just, J.3
Huneau, C.4
Viollet, A.5
Couloux, A.6
Segurens, B.7
Carter, M.8
Huteau, V.9
Coriton, O.10
Appels, R.11
Samain, S.12
Chalhoub, B.13
-
25
-
-
75949117260
-
Molecular mechanisms of polyploidy and hybrid vigor
-
Chen ZJ (2010) Molecular mechanisms of polyploidy and hybrid vigor. Trends Plant Sci 15:57-71
-
(2010)
Trends Plant Sci
, vol.15
, pp. 57-71
-
-
Chen, Z.J.1
-
26
-
-
33645389485
-
Mechanisms of genomic rearrangements and gene expression changes in plant polyploids
-
Chen ZJ, Ni Z (2006) Mechanisms of genomic rearrangements and gene expression changes in plant polyploids. Bioessays 28:240-252
-
(2006)
Bioessays
, vol.28
, pp. 240-252
-
-
Chen, Z.J.1
Ni, Z.2
-
27
-
-
77649190691
-
Strong positive selection drives rapid diversification of R-genes in Arabidopsis relatives
-
Chen Q, Han Z, Jiang H, Tian D, Yang S (2010) Strong positive selection drives rapid diversification of R-genes in Arabidopsis relatives. JMol Evol 70:137-148
-
(2010)
JMol Evol
, vol.70
, pp. 137-148
-
-
Chen, Q.1
Han, Z.2
Jiang, H.3
Tian, D.4
Yang, S.5
-
28
-
-
0033789617
-
Phenotypic instability and rapid gene silencing in newly formed Arabidopsis allotetraploids
-
Comai L, Tyagi AP, Winter K, Holmes-Davis R, Reynolds SH, Stevens Y, Byers B (2000) Phenotypic instability and rapid gene silencing in newly formed Arabidopsis allotetraploids. Plant Cell 12:1551-1567
-
(2000)
Plant Cell
, vol.12
, pp. 1551-1567
-
-
Comai, L.1
Tyagi, A.P.2
Winter, K.3
Holmes-Davis, R.4
Reynolds, S.H.5
Stevens, Y.6
Byers, B.7
-
29
-
-
0035108110
-
The polar arrangement of telomeres in interphase and meiosis. Rabl organisation and the bouquet
-
Cowan CR, Carlton PM, Cande WZ (2001) The polar arrangement of telomeres in interphase and meiosis. Rabl organisation and the bouquet. Plant Physiol 125:532-538
-
(2001)
Plant Physiol
, vol.125
, pp. 532-538
-
-
Cowan, C.R.1
Carlton, P.M.2
Cande, W.Z.3
-
31
-
-
70350645172
-
A nomadic subtelomeric disease resistance gene cluster in common bean
-
David P, Chen NW, Pedrosa-Harand A, Thareau V, Sévignac M, Cannon SB, Debouck D, Langin T, Geffroy V (2009) A nomadic subtelomeric disease resistance gene cluster in common bean. Plant Physiol 151:1048-1065
-
(2009)
Plant Physiol
, vol.151
, pp. 1048-1065
-
-
David, P.1
Chen, N.W.2
Pedrosa-Harand, A.3
Thareau, V.4
Sévignac, M.5
Cannon, S.B.6
Debouck, D.7
Langin, T.8
Geffroy, V.9
-
32
-
-
77958462555
-
Copy number variation shapes genome diversity in Arabidopsis over immediate family generational scales
-
DeBolt S (2010) Copy number variation shapes genome diversity in Arabidopsis over immediate family generational scales. Genome Biol Evol 2:441-453
-
(2010)
Genome Biol Evol
, vol.2
, pp. 441-453
-
-
DeBolt, S.1
-
33
-
-
34447509197
-
Highly asymmetric rice genomes
-
Ding J, Araki H, Wang Q, Zhang P, Yang S, Chen JQ, Tian D (2007) Highly asymmetric rice genomes. BMC Genomics 8:154
-
(2007)
BMC Genomics
, vol.8
, pp. 154
-
-
Ding, J.1
Araki, H.2
Wang, Q.3
Zhang, P.4
Yang, S.5
Chen, J.Q.6
Tian, D.7
-
34
-
-
79955751729
-
Differential contributions to the transcriptome of duplicated genes in response to abiotic stresses in natural and synthetic polyploids
-
Dong S, Adams K (2011) Differential contributions to the transcriptome of duplicated genes in response to abiotic stresses in natural and synthetic polyploids. New Phytol 190:1045-1057
-
(2011)
New Phytol
, vol.190
, pp. 1045-1057
-
-
Dong, S.1
Adams, K.2
-
35
-
-
0031762360
-
Non-Rabl patterns of centromere and telomere distribution in the interphase nuclei of plant cells
-
Dong F, Jiang J (1998) Non-Rabl patterns of centromere and telomere distribution in the interphase nuclei of plant cells. Chromosome Res 6:551-558
-
(1998)
Chromosome Res
, vol.6
, pp. 551-558
-
-
Dong, F.1
Jiang, J.2
-
36
-
-
73949127791
-
The polychromatic Helitron landscape of the maize genome
-
Du C, Fefelova N, Caronna J, He L, Dooner HK (2009) The polychromatic Helitron landscape of the maize genome. Proc Natl Acad Sci USA 106:19916-19921
-
(2009)
Proc Natl Acad Sci USA
, vol.106
, pp. 19916-19921
-
-
Du, C.1
Fefelova, N.2
Caronna, J.3
He, L.4
Dooner, H.K.5
-
38
-
-
28644433483
-
Centromere positioning and dynamics in living Arabidopsis plants
-
Fang Y, Spector DL (2005) Centromere positioning and dynamics in living Arabidopsis plants. Mol Biol Cell 16:5710-5718
-
(2005)
Mol Biol Cell
, vol.16
, pp. 5710-5718
-
-
Fang, Y.1
Spector, D.L.2
-
39
-
-
65249143921
-
Plants with double genomes might have had chance to survive the Cretaceous - Tertiary extinction event
-
Fawcett JA, Maere S, Van de Peer Y (2009) Plants with double genomes might have had chance to survive the Cretaceous - Tertiary extinction event. Proc Natl Acad Sci USA 106:5737-5742
-
(2009)
Proc Natl Acad Sci USA
, vol.106
, pp. 5737-5742
-
-
Fawcett, J.A.1
Maere, S.2
Van de Peer, Y.3
-
40
-
-
0030671532
-
Rapid elimination of low-copy DNA sequences in polyploid wheat: A possible mechanism for differentiation of homoeologous chromosomes
-
Feldman M, Liu B, Segal G, Abbo S, Levy AA, Vega JM (1997) Rapid elimination of low-copy DNA sequences in polyploid wheat: a possible mechanism for differentiation of homoeologous chromosomes. Genetics 147:1381-1387
-
(1997)
Genetics
, vol.147
, pp. 1381-1387
-
-
Feldman, M.1
Liu, B.2
Segal, G.3
Abbo, S.4
Levy, A.A.5
Vega, J.M.6
-
41
-
-
74949084336
-
Genome-wide mapping of alternative splicing in Arabidopsis thaliana
-
Filichkin SA, Priest HD, Givan SA, Shen R, Bryant DW, Fox SE, Wong WK, Mockler TC (2010) Genome-wide mapping of alternative splicing in Arabidopsis thaliana. Genome Res 20:45-58
-
(2010)
Genome Res
, vol.20
, pp. 45-58
-
-
Filichkin, S.A.1
Priest, H.D.2
Givan, S.A.3
Shen, R.4
Bryant, D.W.5
Fox, S.E.6
Wong, W.K.7
Mockler, T.C.8
-
42
-
-
0000322073
-
Tissue-specific elimination of alternative whole parental genomes in one barley hybrid
-
Finch RA (1983) Tissue-specific elimination of alternative whole parental genomes in one barley hybrid. Chromosoma 88:386-393
-
(1983)
Chromosoma
, vol.88
, pp. 386-393
-
-
Finch, R.A.1
-
43
-
-
7844244448
-
The mechanism of somatic chromosome elimination in Hordeum
-
Brandham PE, Bennett MD (eds), Allen and Unwin, London
-
Finch RA, Bennett MD (1983) The mechanism of somatic chromosome elimination in Hordeum. In: Brandham PE, Bennett MD (eds) Kew chromosome conference II. Allen and Unwin, London, pp 147-154
-
(1983)
Kew chromosome conference II
, pp. 147-154
-
-
Finch, R.A.1
Bennett, M.D.2
-
44
-
-
0019731451
-
Hordeum and Secale mitotic genomes lie apart in a hybrid
-
Finch RA, Smith JB, Bennett MD (1981) Hordeum and Secale mitotic genomes lie apart in a hybrid. J Cell Sci 52:391-403
-
(1981)
J Cell Sci
, vol.52
, pp. 391-403
-
-
Finch, R.A.1
Smith, J.B.2
Bennett, M.D.3
-
45
-
-
77950931393
-
Evolutionary rate variation, genomic dominance and duplicate gene expression evolution during allotetraploid cotton speciation
-
Flagel LE, Wendel JF (2010) Evolutionary rate variation, genomic dominance and duplicate gene expression evolution during allotetraploid cotton speciation. New Phytol 186:184-193
-
(2010)
New Phytol
, vol.186
, pp. 184-193
-
-
Flagel, L.E.1
Wendel, J.F.2
-
46
-
-
79953240134
-
From nucleosome to chromosome: A dynamic organization of genetic information
-
Fransz P, de Jong H (2011) From nucleosome to chromosome: a dynamic organization of genetic information. Plant J 66:4-17
-
(2011)
Plant J
, vol.66
, pp. 4-17
-
-
Fransz, P.1
de Jong, H.2
-
47
-
-
0037195153
-
Interphase chromosomes in Arabidopsis are organised as well defined chromocenters from which euchromatin loops emanate
-
Fransz P, De Jong H, Lysák M, Castiglione MF, Schubert I (2002) Interphase chromosomes in Arabidopsis are organised as well defined chromocenters from which euchromatin loops emanate. Proc Natl Acad Sci USA 99:14584-14589
-
(2002)
Proc Natl Acad Sci USA
, vol.99
, pp. 14584-14589
-
-
Fransz, P.1
De Jong, H.2
Lysák, M.3
Castiglione, M.F.4
Schubert, I.5
-
48
-
-
0037047037
-
Intraspecific violation of genetic colinearity and its implications in maize
-
Fu HH, Dooner HK (2002) Intraspecific violation of genetic colinearity and its implications in maize. Proc Natl Acad Sci USA 99:9573-9578
-
(2002)
Proc Natl Acad Sci USA
, vol.99
, pp. 9573-9578
-
-
Fu, H.H.1
Dooner, H.K.2
-
49
-
-
33646048752
-
Chromosomal histone modification patterns - from conservation to diversity
-
Fuchs J, Demidov D, Houben A, Schubert I (2006) Chromosomal histone modification patterns - from conservation to diversity. Trends Plant Sci 11:199-208
-
(2006)
Trends Plant Sci
, vol.11
, pp. 199-208
-
-
Fuchs, J.1
Demidov, D.2
Houben, A.3
Schubert, I.4
-
50
-
-
0030959648
-
DNA sequence evidence for the segmental allotetraploid origin of maize
-
Gaut BS, Doebley JF (1997) DNA sequence evidence for the segmental allotetraploid origin of maize. Proc Natl Acad Sci USA 94:6809-6814
-
(1997)
Proc Natl Acad Sci USA
, vol.94
, pp. 6809-6814
-
-
Gaut, B.S.1
Doebley, J.F.2
-
51
-
-
67149086996
-
Extensive demethylation of repetitive elements during seed development underlies gene imprinting
-
Gehring M, Bubb KL, Henikoff S (2009) Extensive demethylation of repetitive elements during seed development underlies gene imprinting. Science 324:1447-1451
-
(2009)
Science
, vol.324
, pp. 1447-1451
-
-
Gehring, M.1
Bubb, K.L.2
Henikoff, S.3
-
52
-
-
33644684612
-
Uniparental chromosome elimination at mitosis and interphase in wheat and pearl millet crosses involves micronucleus formation, progressive heterochromatinization, and DNA fragmentation
-
Gernand D, Rutten T, Varshney A, Rubtsova M, Prodanovic S, Brüss C, Kumlehn J, Matzk F, Houben A (2005) Uniparental chromosome elimination at mitosis and interphase in wheat and pearl millet crosses involves micronucleus formation, progressive heterochromatinization, and DNA fragmentation. Plant Cell 17:2431-2438
-
(2005)
Plant Cell
, vol.17
, pp. 2431-2438
-
-
Gernand, D.1
Rutten, T.2
Varshney, A.3
Rubtsova, M.4
Prodanovic, S.5
Brüss, C.6
Kumlehn, J.7
Matzk, F.8
Houben, A.9
-
53
-
-
0002873475
-
Nucleo-cytoplasmic interaction (NCI) hypothesis of genome evolution and speciation in polyploid plants
-
Sasakuma T, Kinoshita T (eds), Yokohama, Japan
-
Gill BS (1991) Nucleo-cytoplasmic interaction (NCI) hypothesis of genome evolution and speciation in polyploid plants. In: Sasakuma T, Kinoshita T (eds) pp 48-53, Proceedings of the Kihara memorial symposium on cytoplasmic engineering in wheat. Yokohama, Japan
-
(1991)
Proceedings of the Kihara memorial symposium on cytoplasmic engineering in wheat
-
-
Gill, B.S.1
-
54
-
-
34250172721
-
The three-dimensional structure of human interphase chromosomes is related to the transcriptome map
-
Goetze S, Mateos-Langerak J, Gierman HJ, de Leeuw W, Giromus O, Indemans MH, Koster J, Ondrej V, Versteeg R, van Driel R (2007) The three-dimensional structure of human interphase chromosomes is related to the transcriptome map. Mol Cell Biol 27: 4475-4487
-
(2007)
Mol Cell Biol
, vol.27
, pp. 4475-4487
-
-
Goetze, S.1
Mateos-Langerak, J.2
Gierman, H.J.3
de Leeuw, W.4
Giromus, O.5
Indemans, M.H.6
Koster, J.7
Ondrej, V.8
Versteeg, R.9
van Driel, R.10
-
55
-
-
70450204614
-
A first-generation haplotype map of maize
-
Gore MA, Chia JM, Elshire RJ, Sun Q, Ersoz ES, Hurwitz BL, Peiffer JA, McMullen MD, Grills GS, Ross-Ibarra J, Ware DH, Buckler ES (2009) A first-generation haplotype map of maize. Science 326: 1115-1117
-
(2009)
Science
, vol.326
, pp. 1115-1117
-
-
Gore, M.A.1
Chia, J.M.2
Elshire, R.J.3
Sun, Q.4
Ersoz, E.S.5
Hurwitz, B.L.6
Peiffer, J.A.7
McMullen, M.D.8
Grills, G.S.9
Ross-Ibarra, J.10
Ware, D.H.11
Buckler, E.S.12
-
56
-
-
0001076782
-
Parent-specific gene-expression and the triploid endosperm
-
Haig D, Westoby M (1989) Parent-specific gene-expression and the triploid endosperm. Am Nat 134:147-155
-
(1989)
Am Nat
, vol.134
, pp. 147-155
-
-
Haig, D.1
Westoby, M.2
-
57
-
-
62549151798
-
The functional role of pack-MULEs in rice inferred from purifying selection and expression profile
-
Hanada K, Vallejo V, Nobuta K, Slotkin RK, Lisch D, Meyers BC, Shiu SH, Jiang N (2009) The functional role of pack-MULEs in rice inferred from purifying selection and expression profile. Plant Cell 21:25-38
-
(2009)
Plant Cell
, vol.21
, pp. 25-38
-
-
Hanada, K.1
Vallejo, V.2
Nobuta, K.3
Slotkin, R.K.4
Lisch, D.5
Meyers, B.C.6
Shiu, S.H.7
Jiang, N.8
-
58
-
-
0001788365
-
Taxonomy, evolution, and history
-
Rabinowitch HD, Brewster JL (eds), CRC Press, Boca Raton
-
Hanelt P (1990) Taxonomy, evolution, and history. In: Rabinowitch HD, Brewster JL (eds) Onions and allied crops, vol I, Botany, physiology and genetics. CRC Press, Boca Raton, pp 1-24
-
(1990)
Onions and allied crops, vol I, Botany, physiology and genetics
, pp. 1-24
-
-
Hanelt, P.1
-
59
-
-
66649090313
-
Haplotype structure strongly affects recombination in a maize genetic interval polymorphic for Helitron and retrotransposon insertions
-
He LM, Dooner HK (2009) Haplotype structure strongly affects recombination in a maize genetic interval polymorphic for Helitron and retrotransposon insertions. Proc Natl Acad Sci USA 106:8410-8416
-
(2009)
Proc Natl Acad Sci USA
, vol.106
, pp. 8410-8416
-
-
He, L.M.1
Dooner, H.K.2
-
60
-
-
13144275312
-
Hybrid speciation in plants: New insights from molecular studies
-
Hegarty MJ, Hiscock SJ (2005) Hybrid speciation in plants: new insights from molecular studies. New Phytol 165:411-423
-
(2005)
New Phytol
, vol.165
, pp. 411-423
-
-
Hegarty, M.J.1
Hiscock, S.J.2
-
61
-
-
43449099736
-
Genomic clues to the evolutionary success of polyploid plants
-
Hegarty MJ, Hiscock SJ (2008) Genomic clues to the evolutionary success of polyploid plants. Curr Biol 18:R435-R444
-
(2008)
Curr Biol
, vol.18
, pp. R435-R444
-
-
Hegarty, M.J.1
Hiscock, S.J.2
-
62
-
-
33747161960
-
Transcriptome shock after interspecific hybridisation in Senecio is ameliorated by genome duplication
-
Hegarty MJ, Barker GL, Wilson ID, Abbott RJ, Edwards KJ, Hiscock SJ (2006) Transcriptome shock after interspecific hybridisation in Senecio is ameliorated by genome duplication. Curr Biol 16:1652-1659
-
(2006)
Curr Biol
, vol.16
, pp. 1652-1659
-
-
Hegarty, M.J.1
Barker, G.L.2
Wilson, I.D.3
Abbott, R.J.4
Edwards, K.J.5
Hiscock, S.J.6
-
63
-
-
49649120162
-
Changes to gene expression associated with hybrid speciation in plants: Further insights from transcriptomic studies in Senecio
-
Hegarty MJ, Barker GL, Brennan AC, Abbott RJ, Edwards KJ, Hiscock SJ (2008) Changes to gene expression associated with hybrid speciation in plants: further insights from transcriptomic studies in Senecio. Philos Trans Roy Soc Lond B Bio 363:3055-3069
-
(2008)
Philos Trans Roy Soc Lond B Bio
, vol.363
, pp. 3055-3069
-
-
Hegarty, M.J.1
Barker, G.L.2
Brennan, A.C.3
Abbott, R.J.4
Edwards, K.J.5
Hiscock, S.J.6
-
64
-
-
0000251397
-
Das Heterochromatin der Moose. I
-
Heitz E (1928) Das Heterochromatin der Moose. I. Jahrb Wiss Bot 69:762-818
-
(1928)
Jahrb Wiss Bot
, vol.69
, pp. 762-818
-
-
Heitz, E.1
-
66
-
-
79952303685
-
Transposable elements and small RNAs contribute to gene expression divergence between Arabidopsis thaliana and Arabidopsis lyrata
-
Hollister JD, Smith LM, Guo YL, Ott F, Weigel D, Gaut BS (2011) Transposable elements and small RNAs contribute to gene expression divergence between Arabidopsis thaliana and Arabidopsis lyrata. Proc Natl Acad Sci USA 108:2322-2327
-
(2011)
Proc Natl Acad Sci USA
, vol.108
, pp. 2322-2327
-
-
Hollister, J.D.1
Smith, L.M.2
Guo, Y.L.3
Ott, F.4
Weigel, D.5
Gaut, B.S.6
-
67
-
-
79952143430
-
Regulation of imprinted gene expression in Arabidopsis endosperm
-
Hsieh TF, Shin J, Uzawa R, Silva P, Cohen S, Bauer MJ, HashimotoM, Kirkbride RC, Harada JJ, Zilberman D, Fischer RL (2011) Regulation of imprinted gene expression in Arabidopsis endosperm. Proc Natl Acad Sci USA 108:1755-1762
-
(2011)
Proc Natl Acad Sci USA
, vol.108
, pp. 1755-1762
-
-
Hsieh, T.F.1
Shin, J.2
Uzawa, R.3
Silva, P.4
Cohen, S.5
Bauer, M.J.6
Hashimoto, M.7
Kirkbride, R.C.8
Harada, J.J.9
Zilberman, D.10
Fischer, R.L.11
-
68
-
-
0028852942
-
Discriminating the ancestral progenitors of hexaploid Festuca arundinacea using genomic in situ hybridisation
-
Humphreys MW, Thomas HM, Morgan WG, Meredith MR, Harper JA, Thomas H, Zwierzykowski Z, Ghesquiére M (1995) Discriminating the ancestral progenitors of hexaploid Festuca arundinacea using genomic in situ hybridisation. Heredity 75:171-174
-
(1995)
Heredity
, vol.75
, pp. 171-174
-
-
Humphreys, M.W.1
Thomas, H.M.2
Morgan, W.G.3
Meredith, M.R.4
Harper, J.A.5
Thomas, H.6
Zwierzykowski, Z.7
Ghesquiére, M.8
-
69
-
-
78649949031
-
Chromosome elimination by wide hybridisation between Triticeae or oat plant and pearl millet: Pearl millet chromosome dynamics in hybrid embryo cells
-
Ishii T, Ueda T, Tanaka H, Tsujimoto H (2010) Chromosome elimination by wide hybridisation between Triticeae or oat plant and pearl millet: pearl millet chromosome dynamics in hybrid embryo cells. Chromosome Res 18:821-831
-
(2010)
Chromosome Res
, vol.18
, pp. 821-831
-
-
Ishii, T.1
Ueda, T.2
Tanaka, H.3
Tsujimoto, H.4
-
70
-
-
34249819663
-
F-box proteins in rice. Genome-wide analysis classification temporal and spatial gene expression during panicle and seed development and regulation by light and abiotic stress
-
Jain M, Nijhawan A, Arora R, Agarwal P, Ray S, Sharma P, Kapoor S, Tyagi AK, Khurana JP (2007) F-box proteins in rice. Genome-wide analysis classification temporal and spatial gene expression during panicle and seed development and regulation by light and abiotic stress. Plant Physiol 143:1467-1483
-
(2007)
Plant Physiol
, vol.143
, pp. 1467-1483
-
-
Jain, M.1
Nijhawan, A.2
Arora, R.3
Agarwal, P.4
Ray, S.5
Sharma, P.6
Kapoor, S.7
Tyagi, A.K.8
Khurana, J.P.9
-
71
-
-
84966193667
-
Elimination of synaptonemal complex irregularities in a Lolium hybrid
-
Jenkins G, White J (1990) Elimination of synaptonemal complex irregularities in a Lolium hybrid. Heredity 64:45-53
-
(1990)
Heredity
, vol.64
, pp. 45-53
-
-
Jenkins, G.1
White, J.2
-
72
-
-
79955630390
-
Ancestral polyploidy in seed plants and angiosperms
-
Jiao Y, Wickett NJ, Ayyampalayam S, Chanderbali AS, Landherr L, Ralph PE, Tomsho LP, Hu Y, Liang H, Soltis PS, Soltis DE, Clifton SW, Schlarbaum SE, Schuster SC, Ma H, Leebens-Mack J, dePamphilis CW (2011) Ancestral polyploidy in seed plants and angiosperms. Nature 473:97-100
-
(2011)
Nature
, vol.473
, pp. 97-100
-
-
Jiao, Y.1
Wickett, N.J.2
Ayyampalayam, S.3
Chanderbali, A.S.4
Landherr, L.5
Ralph, P.E.6
Tomsho, L.P.7
Hu, Y.8
Liang, H.9
Soltis, P.S.10
Soltis, D.E.11
Clifton, S.W.12
Schlarbaum, S.E.13
Schuster, S.C.14
Ma, H.15
Leebens-Mack, J.16
dePamphilis, C.W.17
-
73
-
-
1542647343
-
Maize centromeres: Organization and functional adaptation in the genetic background of oat
-
Jin W, Melo JR, Nagaki K, Talbert PB, Henikoff S, Dawe RK, Jiang J (2004) Maize centromeres: organization and functional adaptation in the genetic background of oat. Plant Cell 16:571-581
-
(2004)
Plant Cell
, vol.16
, pp. 571-581
-
-
Jin, W.1
Melo, J.R.2
Nagaki, K.3
Talbert, P.B.4
Henikoff, S.5
Dawe, R.K.6
Jiang, J.7
-
74
-
-
67651227407
-
Assessing the impact of transgenerational epigenetic variation on complex traits
-
Johannes F, Porcher E, Teixeira FK, Saliba-Colombani V, Simon M, Agier N, Bulski A, Albuisson J, Heredia F, Audigier P, Bouchez D, Dillmann C, Guerche P, Hospital F, Colot V (2009) Assessing the impact of transgenerational epigenetic variation on complex traits. PLoS Genet 5:e1000530
-
(2009)
PLoS Genet
, vol.5
-
-
Johannes, F.1
Porcher, E.2
Teixeira, F.K.3
Saliba-Colombani, V.4
Simon, M.5
Agier, N.6
Bulski, A.7
Albuisson, J.8
Heredia, F.9
Audigier, P.10
Bouchez, D.11
Dillmann, C.12
Guerche, P.13
Hospital, F.14
Colot, V.15
-
75
-
-
85013565590
-
Cytogenetics of alliums
-
Tsuchiya T, Gupta PK (eds), Elsevier, Amsterdam
-
Jones RN (1991) Cytogenetics of alliums. In: Tsuchiya T, Gupta PK (eds) Chromosome engineering in plants: genetics, breeding, evolution, Part B. Elsevier, Amsterdam, pp 215-227
-
(1991)
Chromosome engineering in plants: Genetics, breeding, evolution, Part B
, pp. 215-227
-
-
Jones, R.N.1
-
76
-
-
75749117546
-
Order out of chaos in the hybrid plant nucleus
-
Jones RN, Hegarty M (2009) Order out of chaos in the hybrid plant nucleus. Cytogenet Genome Res 126:376-389
-
(2009)
Cytogenet Genome Res
, vol.126
, pp. 376-389
-
-
Jones, R.N.1
Hegarty, M.2
-
77
-
-
13144297196
-
Genome conflict in the Gramineae
-
Jones RN, Pašakinskienė I (2005) Genome conflict in the Gramineae. New Phytol 165:391-410
-
(2005)
New Phytol
, vol.165
, pp. 391-410
-
-
Jones, R.N.1
Pašakinskienė, I.2
-
78
-
-
0034612315
-
Genome evolution of wild barley (Hordeum spontaneum) by BARE-1 retrotransposon dynamics in response to sharp microclimatic divergence
-
Kalendar R, Tanskanen J, Immonen S, Nevo E, Schulman AH (2000) Genome evolution of wild barley (Hordeum spontaneum) by BARE-1 retrotransposon dynamics in response to sharp microclimatic divergence. Proc Natl Acad Sci USA 97:6603-6607
-
(2000)
Proc Natl Acad Sci USA
, vol.97
, pp. 6603-6607
-
-
Kalendar, R.1
Tanskanen, J.2
Immonen, S.3
Nevo, E.4
Schulman, A.H.5
-
79
-
-
79953078781
-
Analysis of plant diversity with retrotransposon-based molecular markers
-
Kalendar R, Flavell AJ, Ellis TH, Sjakste T, Moisy C, Schulman AH (2011) Analysis of plant diversity with retrotransposon-based molecular markers. Heredity 106:520-530
-
(2011)
Heredity
, vol.106
, pp. 520-530
-
-
Kalendar, R.1
Flavell, A.J.2
Ellis, T.H.3
Sjakste, T.4
Moisy, C.5
Schulman, A.H.6
-
80
-
-
36949045853
-
High frequency haploid production in barley (Hordeum vulgare L.)
-
Kasha KJ, Kao KN (1970) High frequency haploid production in barley (Hordeum vulgare L.). Nature 225:874-876
-
(1970)
Nature
, vol.225
, pp. 874-876
-
-
Kasha, K.J.1
Kao, K.N.2
-
81
-
-
0036241339
-
Gene loss, silencing and activation in a newly synthesised wheat allotetraploid
-
Kashkush K, Feldman M, Levy AA (2002) Gene loss, silencing and activation in a newly synthesised wheat allotetraploid. Genetics 160:1651-1659
-
(2002)
Genetics
, vol.160
, pp. 1651-1659
-
-
Kashkush, K.1
Feldman, M.2
Levy, A.A.3
-
82
-
-
0037226595
-
Transcriptional activation of retrotransposons alters the expression of adjacent genes in wheat
-
Kashkush K, Feldman M, Levy AA (2003) Transcriptional activation of retrotransposons alters the expression of adjacent genes in wheat. Nat Genet 33:102-106
-
(2003)
Nat Genet
, vol.33
, pp. 102-106
-
-
Kashkush, K.1
Feldman, M.2
Levy, A.A.3
-
83
-
-
78549261357
-
Regulation of transcription in plants: Mechanisms controlling developmental switches
-
Kaufmann K, Pajoro A, Angenent GC (2010) Regulation of transcription in plants: mechanisms controlling developmental switches. Nat Rev Genet 11:830-842
-
(2010)
Nat Rev Genet
, vol.11
, pp. 830-842
-
-
Kaufmann, K.1
Pajoro, A.2
Angenent, G.C.3
-
84
-
-
84948098217
-
Plant transposable elements: Biology and evolution
-
Wendel JF, Greilhuber J, Doležel J, Leitch IJ (eds), Springer-Verlag, Wien
-
Kejnovsky E, Hawkins JS, Feschotte C (2012) Plant transposable elements: biology and evolution. In: Wendel JF, Greilhuber J, Doležel J, Leitch IJ (eds) Plant genome diversity, vol 1, Plant genomes, their residents, and their evolutionary dynamics. Springer-Verlag, Wien, pp 17-34
-
(2012)
Plant genome diversity, vol 1, Plant genomes, their residents, and their evolutionary dynamics
, pp. 17-34
-
-
Kejnovsky, E.1
Hawkins, J.S.2
Feschotte, C.3
-
85
-
-
33746416151
-
Genome constitution and evolution in Lolium × Festuca hybrid cultivars (Festulolium)
-
Kopecký D, Loureiro J, Zwierzykowski Z, Ghesquière M, Doležel J (2006) Genome constitution and evolution in Lolium × Festuca hybrid cultivars (Festulolium). Theor Appl Genet 113:731-742
-
(2006)
Theor Appl Genet
, vol.113
, pp. 731-742
-
-
Kopecký, D.1
Loureiro, J.2
Zwierzykowski, Z.3
Ghesquière, M.4
Doležel, J.5
-
86
-
-
70449732604
-
Development and mapping of DArT markers within the Festuca-Lolium complex
-
Kopecký D, Bartoš J, Lukaszewski AJ, Baird JH,Č ernoch V, Kölliker R, Rognli OA, Blois H, Craig V, Lübberstedt T, Studer B, Shaw B, Dolezel J, Kilian A (2009) Development and mapping of DArT markers within the Festuca-Lolium complex.BMCGenomics 10:473
-
(2009)
BMCGenomics
, vol.10
, pp. 473
-
-
Kopecký, D.1
Bartoš, J.2
Lukaszewski, A.J.3
Baird, J.H.4
Č ernoch, V.5
Kölliker, R.6
Rognli, O.A.7
Blois, H.8
Craig, V.9
Lübberstedt, T.10
Studer, B.11
Shaw, B.12
Dolezel, J.13
Kilian, A.14
-
87
-
-
79952267334
-
Genomic constitution of Festuca × Lolium hybrids revealed by the DArTFest array
-
Kopecký D, Bartoš J, Christelová P, Č ernoch V, Kilian A, Doležel J (2011) Genomic constitution of Festuca × Lolium hybrids revealed by the DArTFest array. Theor Appl Genet 122:355-363
-
(2011)
Theor Appl Genet
, vol.122
, pp. 355-363
-
-
Kopecký, D.1
Bartoš, J.2
Christelová, P.3
Č ernoch, V.4
Kilian, A.5
Doležel, J.6
-
88
-
-
78951489213
-
Genetic and epigenetic dynamics of a retrotransposon after allopolyploidization of wheat
-
Kraitshtein Z, Yaakov B, Khasdan V, Kashkush K (2010) Genetic and epigenetic dynamics of a retrotransposon after allopolyploidization of wheat. Genetics 186:801-812
-
(2010)
Genetics
, vol.186
, pp. 801-812
-
-
Kraitshtein, Z.1
Yaakov, B.2
Khasdan, V.3
Kashkush, K.4
-
89
-
-
78049338441
-
Genome-wide patterns of genetic variation among elite maize inbred lines
-
Lai J, Li R, Xu X, Jin W, Xu M, Zhao H, Xiang Z, Song W, Ying K, ZhangM, Jiao Y, Ni P, Zhang J, LiD, Guo X, Ye K, JianM, Wang B, ZhengH, LiangH, ZhangX, WangS, ChenS, Li J, FuY, SpringerNM, Yang H, Wang J, Dai J, Schnable PS, Wang J (2010) Genome-wide patterns of genetic variation among elite maize inbred lines. Nat Genet 42:1027-1030
-
(2010)
Nat Genet
, vol.42
, pp. 1027-1030
-
-
Lai, J.1
Li, R.2
Xu, X.3
Jin, W.4
Xu, M.5
Zhao, H.6
Xiang, Z.7
Song, W.8
Ying, K.9
Zhang, M.10
Jiao, Y.11
Ni, P.12
Zhang, J.13
Li, D.14
Guo, X.15
Ye, K.16
Jian, M.17
Wang, B.18
Zheng, H.19
Liang, H.20
Zhang, X.21
Wang, S.22
Chen, S.23
Li, J.24
Fu, Y.25
Springer, N.M.26
Yang, H.27
Wang, J.28
Dai, J.29
Schnable, P.S.30
Wang, J.31
more..
-
90
-
-
0000240347
-
Zur Frage nach der Individualität der Chromosomen im Pflanzenreich
-
Laibach F (1907) Zur Frage nach der Individualität der Chromosomen im Pflanzenreich. Beih Bot Centralbl 22:191-210
-
(1907)
Beih Bot Centralbl
, vol.22
, pp. 191-210
-
-
Laibach, F.1
-
91
-
-
0005896183
-
Chromosome behaviour in wheat × maize, wheat × sorghum and barley × maize crosses
-
Brandham PE (ed), HMSO, London
-
Laurie DA, Bennett MD (1988) Chromosome behaviour in wheat × maize, wheat × sorghum and barley × maize crosses. In: Brandham PE (ed) Kew chromosome conference III. HMSO, London, pp 167-177
-
(1988)
Kew chromosome conference III
, pp. 167-177
-
-
Laurie, D.A.1
Bennett, M.D.2
-
92
-
-
0024956688
-
The timing of chromosome elimination in hexaploid wheat × maize crosses
-
Laurie DA, Bennett MD (1989) The timing of chromosome elimination in hexaploid wheat × maize crosses. Genome 32:953-961
-
(1989)
Genome
, vol.32
, pp. 953-961
-
-
Laurie, D.A.1
Bennett, M.D.2
-
94
-
-
0025262470
-
Genomic in situ hybridisation to sectioned nuclei shows chromosome domains in grass hybrids
-
Leitch AR, Mosgoller W, Schwarzacher T, Bennett MD, Heslop-Harrison JS (1990) Genomic in situ hybridisation to sectioned nuclei shows chromosome domains in grass hybrids. J Cell Sci 95:335-341
-
(1990)
J Cell Sci
, vol.95
, pp. 335-341
-
-
Leitch, A.R.1
Mosgoller, W.2
Schwarzacher, T.3
Bennett, M.D.4
Heslop-Harrison, J.S.5
-
95
-
-
0025831110
-
Parental genomes are separated throughout the cell cycle in a plant hybrid
-
Leitch AR, Schwarzacher T, Mosgoller W, Bennett MD, Heslop-Harrison JS (1991) Parental genomes are separated throughout the cell cycle in a plant hybrid. Chromosoma 101:206-213
-
(1991)
Chromosoma
, vol.101
, pp. 206-213
-
-
Leitch, A.R.1
Schwarzacher, T.2
Mosgoller, W.3
Bennett, M.D.4
Heslop-Harrison, J.S.5
-
97
-
-
0036918868
-
The impact of polyploidy on grass genome evolution
-
Levy AA, Feldman M (2002) The impact of polyploidy on grass genome evolution. Plant Physiol 130:1587-1593
-
(2002)
Plant Physiol
, vol.130
, pp. 1587-1593
-
-
Levy, A.A.1
Feldman, M.2
-
98
-
-
70349873824
-
Comprehensive mapping of long-range interactions reveals folding principles of the human genome
-
Lieberman-Aiden E, van Berkum NL, Williams L, ImakaevM, Ragoczy T, Telling A, Amit I, Lajoie BR, Sabo PJ, Dorschner MO, Sandstrom R, Bernstein B, BenderMA, GroudineM, Gnirke A, Stamatoyannopoulos J, Mirny LA, Lander ES, Dekker J (2009) Comprehensive mapping of long-range interactions reveals folding principles of the human genome. Science 326:289-293
-
(2009)
Science
, vol.326
, pp. 289-293
-
-
Lieberman-Aiden, E.1
van Berkum, N.L.2
Williams, L.3
Imakaev, M.4
Ragoczy, T.5
Telling, A.6
Amit, I.7
Lajoie, B.R.8
Sabo, P.J.9
Dorschner, M.O.10
Sandstrom, R.11
Bernstein, B.12
Bender, M.A.13
Groudine, M.14
Gnirke, A.15
Stamatoyannopoulos, J.16
Mirny, L.A.17
Lander, E.S.18
Dekker, J.19
-
99
-
-
54449101933
-
Rapid chromosome evolution in recently formed polyploids in Tragopogon (Asteraceae)
-
Lim KY, Soltis DE, Soltis PS, Tate J, Matyasek R, Srubarova H, Kovarik A, Pires JC, Xiong Z, Leitch AR (2008) Rapid chromosome evolution in recently formed polyploids in Tragopogon (Asteraceae). PLoS One 3:e3353
-
(2008)
PLoS One
, vol.3
-
-
Lim, K.Y.1
Soltis, D.E.2
Soltis, P.S.3
Tate, J.4
Matyasek, R.5
Srubarova, H.6
Kovarik, A.7
Pires, J.C.8
Xiong, Z.9
Leitch, A.R.10
-
100
-
-
0034879460
-
Polyploid formation in cotton is not accompanied by rapid genomic changes
-
Liu B, Brubaker CL, Mergeai G, Cronn RC, Wendel JF (2001) Polyploid formation in cotton is not accompanied by rapid genomic changes. Genome 44:321-330
-
(2001)
Genome
, vol.44
, pp. 321-330
-
-
Liu, B.1
Brubaker, C.L.2
Mergeai, G.3
Cronn, R.C.4
Wendel, J.F.5
-
101
-
-
16344387991
-
Limitations of in situ hybridization with total genomic DNA in routine screening for alien introgression in wheat
-
Lukaszewski AJ, Lapiński B, Rybka K (2005) Limitations of in situ hybridization with total genomic DNA in routine screening for alien introgression in wheat. Cytogenet Genome Res 109:373-377
-
(2005)
Cytogenet Genome Res
, vol.109
, pp. 373-377
-
-
Lukaszewski, A.J.1
Lapiński, B.2
Rybka, K.3
-
102
-
-
0035984262
-
Remodeling of DNA methylation and phenotypic and transcriptional changes in synthetic Arabidopsis allotetraploids
-
Madlung A, Masuelli RW, Watson B, Reynolds SH, Davison J, Comai L (2002) Remodeling of DNA methylation and phenotypic and transcriptional changes in synthetic Arabidopsis allotetraploids. Plant Physiol 129:733-746
-
(2002)
Plant Physiol
, vol.129
, pp. 733-746
-
-
Madlung, A.1
Masuelli, R.W.2
Watson, B.3
Reynolds, S.H.4
Davison, J.5
Comai, L.6
-
103
-
-
70149095590
-
Major evolutionary transitions in centromere complexity
-
Malik HS, Henikoff S (2009) Major evolutionary transitions in centromere complexity. Cell 138:1067-1082
-
(2009)
Cell
, vol.138
, pp. 1067-1082
-
-
Malik, H.S.1
Henikoff, S.2
-
104
-
-
70350504436
-
A transposoninduced epigenetic change leads to sex determination in melon
-
Martin A, Troadec C, Boualem A, Rajab M, Fernandez R, Morin H, Pitrat M, Dogimont C, Bendahmane A (2009) A transposoninduced epigenetic change leads to sex determination in melon. Nature 461:1135-1138
-
(2009)
Nature
, vol.461
, pp. 1135-1138
-
-
Martin, A.1
Troadec, C.2
Boualem, A.3
Rajab, M.4
Fernandez, R.5
Morin, H.6
Pitrat, M.7
Dogimont, C.8
Bendahmane, A.9
-
105
-
-
0033200356
-
Rapid stuctural and epigenetic changes in polyploid and aneuploid genomes
-
Matzke MA, Mittelsten Scheid O, Matzke AJM (1999) Rapid stuctural and epigenetic changes in polyploid and aneuploid genomes. Bioessays 21:761-767
-
(1999)
Bioessays
, vol.21
, pp. 761-767
-
-
Matzke, M.A.1
Mittelsten Scheid, O.2
Matzke, A.J.M.3
-
106
-
-
65249148019
-
RNAmediated chromatin-based silencing in plants
-
Matzke M, Kanno T, Daxinger L, Huettel B, Matzke AJ (2009) RNAmediated chromatin-based silencing in plants. Curr Opin Cell Biol 21:367-376
-
(2009)
Curr Opin Cell Biol
, vol.21
, pp. 367-376
-
-
Matzke, M.1
Kanno, T.2
Daxinger, L.3
Huettel, B.4
Matzke, A.J.5
-
107
-
-
0021715393
-
The significance of responses of the genome to challenge
-
McClintock B (1984) The significance of responses of the genome to challenge. Science 226:792-801
-
(1984)
Science
, vol.226
, pp. 792-801
-
-
McClintock, B.1
-
108
-
-
77950938640
-
Newly synthesized wheat allohexaploids display progenitor-dependent meiotic stability and aneuploidy but structural genomic additivity
-
Mestiri I, Chagué V, Tanguy AM, Huneau C, Huteau V, Belcram H, Coriton O, Chalhoub B, Jahier J (2010) Newly synthesized wheat allohexaploids display progenitor-dependent meiotic stability and aneuploidy but structural genomic additivity. New Phytol 186:86-101
-
(2010)
New Phytol
, vol.186
, pp. 86-101
-
-
Mestiri, I.1
Chagué, V.2
Tanguy, A.M.3
Huneau, C.4
Huteau, V.5
Belcram, H.6
Coriton, O.7
Chalhoub, B.8
Jahier, J.9
-
109
-
-
79957679448
-
Epigenetic contribution to stress adaptation in plants
-
Mirouze M, Paszkowski J (2011) Epigenetic contribution to stress adaptation in plants. Curr Opin Plant Biol 14:1-8
-
(2011)
Curr Opin Plant Biol
, vol.14
, pp. 1-8
-
-
Mirouze, M.1
Paszkowski, J.2
-
110
-
-
1942488154
-
Confocal analysis of chromosome behaviour in wheat × maize zygotes
-
Mochida K, Tsujimoto H, Sasakuma T (2004) Confocal analysis of chromosome behaviour in wheat × maize zygotes. Genome 47:199-205
-
(2004)
Genome
, vol.47
, pp. 199-205
-
-
Mochida, K.1
Tsujimoto, H.2
Sasakuma, T.3
-
111
-
-
77952403409
-
Small silencing RNAs in plants are mobile and direct epigenetic modification in recipient cells
-
Molnar A, Melnyk CW, Bassett A, Hardcastle TJ, Dunn R, Baulcombe DC (2010) Small silencing RNAs in plants are mobile and direct epigenetic modification in recipient cells. Science 328:872-875
-
(2010)
Science
, vol.328
, pp. 872-875
-
-
Molnar, A.1
Melnyk, C.W.2
Bassett, A.3
Hardcastle, T.J.4
Dunn, R.5
Baulcombe, D.C.6
-
112
-
-
0012644151
-
Birth of ‘human-specific’ genes during primate evolution
-
Nahon JL (2003) Birth of ‘human-specific’ genes during primate evolution. Genetica 118:193-208
-
(2003)
Genetica
, vol.118
, pp. 193-208
-
-
Nahon, J.L.1
-
113
-
-
27944477670
-
Concerted and birth-and-death evolution of multigene families
-
Nei M, Rooney AP (2005) Concerted and birth-and-death evolution of multigene families. Annu Rev Genet 39:121-152
-
(2005)
Annu Rev Genet
, vol.39
, pp. 121-152
-
-
Nei, M.1
Rooney, A.P.2
-
114
-
-
14844302397
-
Plant nuclear RNA polymerase IV mediates siRNA and DNA methylation-dependent heterochromatin formation
-
Onodera Y, Haag JR, Ream T, Costa Nunes P, Pontes O, Pikaard CS (2005) Plant nuclear RNA polymerase IV mediates siRNA and DNA methylation-dependent heterochromatin formation. Cell 120:613-622
-
(2005)
Cell
, vol.120
, pp. 613-622
-
-
Onodera, Y.1
Haag, J.R.2
Ream, T.3
Costa Nunes, P.4
Pontes, O.5
Pikaard, C.S.6
-
116
-
-
0034860131
-
Allopolyploidy-induced rapid genome evolution in the wheat (Aegilops - Triticum) group
-
Ozkan H, Levy AA, Feldman M (2001) Allopolyploidy-induced rapid genome evolution in the wheat (Aegilops - Triticum) group. Plant Cell 13:1735-1747
-
(2001)
Plant Cell
, vol.13
, pp. 1735-1747
-
-
Ozkan, H.1
Levy, A.A.2
Feldman, M.3
-
118
-
-
0030917526
-
Novel diploids following chromosome elimination and somatic recombination in Loliummultiflorum × Festuca arundinacea hybrids
-
Pašakinskienė I, Anamthawat-Jonsson K, Humphreys MW, Jones RN (1997)Novel diploids following chromosome elimination and somatic recombination in Loliummultiflorum × Festuca arundinacea hybrids. Heredity 78:464-469
-
(1997)
Heredity
, vol.78
, pp. 464-469
-
-
Pašakinskienė, I.1
Anamthawat-Jonsson, K.2
Humphreys, M.W.3
Jones, R.N.4
-
119
-
-
0032421089
-
New molecular evidence on genome relationships and chromosome identification in Festuca and Lolium
-
Pašakinskienė I, Anamthawat-Jonsson K, HumphreysMW, Paplauskiene V, Jones RN (1998) New molecular evidence on genome relationships and chromosome identification in Festuca and Lolium. Heredity 81:659-665
-
(1998)
Heredity
, vol.81
, pp. 659-665
-
-
Pašakinskienė, I.1
Anamthawat-Jonsson, K.2
Humphreys, M.W.3
Paplauskiene, V.4
Jones, R.N.5
-
120
-
-
16344370453
-
A decade of ‘chromosome painting’ in Lolium and Festuca: Species relationships and genome adjustment in hybrids
-
Pašakinskienė I, Jones RN (2005) A decade of ‘chromosome painting’ in Lolium and Festuca: species relationships and genome adjustment in hybrids. Cytogenet Genome Res 109:393-399
-
(2005)
Cytogenet Genome Res
, vol.109
, pp. 393-399
-
-
Pašakinskienė, I.1
Jones, R.N.2
-
121
-
-
63449109251
-
Hybrid speciation in angiosperms: Parental divergence drives ploidy
-
Paun O, Forest F, Fay MF, Chase MW (2009) Hybrid speciation in angiosperms: parental divergence drives ploidy. New Phytol 182:507-518
-
(2009)
New Phytol
, vol.182
, pp. 507-518
-
-
Paun, O.1
Forest, F.2
Fay, M.F.3
Chase, M.W.4
-
122
-
-
7744223544
-
Chromosome territory arrangement and homologous pairing in nuclei of Arabidopsis thaliana are predominantly random except for NOR-bearing chromosomes
-
Pecinka A, Schubert V, Meister A, Kreth G, Klatte M, Lysák MA, Fuchs J, Schubert I (2004) Chromosome territory arrangement and homologous pairing in nuclei of Arabidopsis thaliana are predominantly random except for NOR-bearing chromosomes. Chromosoma 113:258-269
-
(2004)
Chromosoma
, vol.113
, pp. 258-269
-
-
Pecinka, A.1
Schubert, V.2
Meister, A.3
Kreth, G.4
Klatte, M.5
Lysák, M.A.6
Fuchs, J.7
Schubert, I.8
-
123
-
-
79960122986
-
When is enough, enough in phylogenetics? A case in point from Hordeum (Poaceae)
-
Petersena G, Aagesenb L, Seberga O, Larsen IH (2011) When is enough, enough in phylogenetics? A case in point from Hordeum (Poaceae). Cladistics 27:1-19
-
(2011)
Cladistics
, vol.27
, pp. 1-19
-
-
Petersena, G.1
Aagesenb, L.2
Seberga, O.3
Larsen, I.H.4
-
124
-
-
62549107556
-
Nonadditive expression of homoeologous genes is established upon polyploidization in hexaploid wheat
-
Pumphrey M, Bai J, Laudencia-Chingcuanco D, Anderson O, Gill BS (2009) Nonadditive expression of homoeologous genes is established upon polyploidization in hexaploid wheat. Genetics 181:1147-1157
-
(2009)
Genetics
, vol.181
, pp. 1147-1157
-
-
Pumphrey, M.1
Bai, J.2
Laudencia-Chingcuanco, D.3
Anderson, O.4
Gill, B.S.5
-
125
-
-
0001144847
-
Über Zelltheilung
-
Rabl C (1885) Über Zelltheilung. Morphol Jahrb 10:214-330
-
(1885)
Morphol Jahrb
, vol.10
, pp. 214-330
-
-
Rabl, C.1
-
127
-
-
66149174929
-
Genomic expression dominance in allopolyploids
-
Rapp RA, UdalL JA, Wendel JF (2009) Genomic expression dominance in allopolyploids. BMC Biol 7:18
-
(2009)
BMC Biol
, vol.7
, pp. 18
-
-
Rapp, R.A.1
UdalL, J.A.2
Wendel, J.F.3
-
128
-
-
78149432467
-
Gene expression in developing fibers of Upland cotton (Gossypium hirsutum L.) was massively altered by domestication
-
Rapp RA, Haigler CH, Flagel L, Hovav RH, Udall JA, Wendel JF (2010) Gene expression in developing fibers of Upland cotton (Gossypium hirsutum L.) was massively altered by domestication. BMC Biol 8:139
-
(2010)
BMC Biol
, vol.8
, pp. 139
-
-
Rapp, R.A.1
Haigler, C.H.2
Flagel, L.3
Hovav, R.H.4
Udall, J.A.5
Wendel, J.F.6
-
129
-
-
65249186659
-
Compromised stability of DNA methylation and transposon immobilization in mosaic Arabidopsis epigenomes
-
Reinders J, Wulff BB, MirouzeM, Marí-Ordóñez A, Dapp M, Rozhon W, Bucher E, Theiler G, Paszkowski J (2009) Compromised stability of DNA methylation and transposon immobilization in mosaic Arabidopsis epigenomes. Genes Dev 23:939-950
-
(2009)
Genes Dev
, vol.23
, pp. 939-950
-
-
Reinders, J.1
Wulff, B.B.2
Mirouze, M.3
Marí-Ordóñez, A.4
Dapp, M.5
Rozhon, W.6
Bucher, E.7
Theiler, G.8
Paszkowski, J.9
-
130
-
-
0242285657
-
Effects of reunited diverged regulatory hierarchies in allopolyploids and species hybrids
-
Riddle NC, Birchler JA (2003) Effects of reunited diverged regulatory hierarchies in allopolyploids and species hybrids. Trends Genet 19:597-600
-
(2003)
Trends Genet
, vol.19
, pp. 597-600
-
-
Riddle, N.C.1
Birchler, J.A.2
-
131
-
-
0029841434
-
Cytological and molecular characterisation of oat × maize partial hybrids
-
Riera-Lizarazu O, Rines HW, Phillips RL (1996) Cytological and molecular characterisation of oat × maize partial hybrids. Theor Appl Genet 93:123-135
-
(1996)
Theor Appl Genet
, vol.93
, pp. 123-135
-
-
Riera-Lizarazu, O.1
Rines, H.W.2
Phillips, R.L.3
-
132
-
-
0031465850
-
Hybrid origins of plant species
-
Rieseberg LH (1997) Hybrid origins of plant species. Annu Rev Ecol Syst 28:359-389
-
(1997)
Annu Rev Ecol Syst
, vol.28
, pp. 359-389
-
-
Rieseberg, L.H.1
-
133
-
-
77956013849
-
Speciation genes in plants
-
Rieseberg LH, Blackman BK (2010) Speciation genes in plants. Ann Bot 106:439-455
-
(2010)
Ann Bot
, vol.106
, pp. 439-455
-
-
Rieseberg, L.H.1
Blackman, B.K.2
-
135
-
-
34247478148
-
Locational distribution of gene functional classes in Arabidopsis thaliana
-
Riley MC, Clare A, King R (2007) Locational distribution of gene functional classes in Arabidopsis thaliana. BMC Bioinformatics 8:112
-
(2007)
BMC Bioinformatics
, vol.8
, pp. 112
-
-
Riley, M.C.1
Clare, A.2
King, R.3
-
136
-
-
78751650831
-
Natural diversity in flowering responses of Arabidopsis thaliana caused by variation in a tandem gene array
-
Rosloski SM, Jali SS, Balasubramanian S, Weigel D, Grbic V (2010) Natural diversity in flowering responses of Arabidopsis thaliana caused by variation in a tandem gene array. Genetics 186:263-276
-
(2010)
Genetics
, vol.186
, pp. 263-276
-
-
Rosloski, S.M.1
Jali, S.S.2
Balasubramanian, S.3
Weigel, D.4
Grbic, V.5
-
137
-
-
77954457057
-
Functional nuclear architecture studied by microscopy: Present and future
-
Rouquette J, Cremer C, Cremer T, Fakan S (2010) Functional nuclear architecture studied by microscopy: present and future. Int Rev Cell Mol Biol 282:1-90
-
(2010)
Int Rev Cell Mol Biol
, vol.282
, pp. 1-90
-
-
Rouquette, J.1
Cremer, C.2
Cremer, T.3
Fakan, S.4
-
138
-
-
77955293759
-
Interspecific hybrids of Hordeum marinum ssp. marinum × H. bulbosum are mitotically stable and reveal no gross alterations in chromatin properties
-
Sanei M, Pickering R, Fuchs J, Banaei Moghaddam AM, Dziurlikowska A, Houben DA (2010) Interspecific hybrids of Hordeum marinum ssp. marinum × H. bulbosum are mitotically stable and reveal no gross alterations in chromatin properties. Cytogenet Genome Res 129:110-116
-
(2010)
Cytogenet Genome Res
, vol.129
, pp. 110-116
-
-
Sanei, M.1
Pickering, R.2
Fuchs, J.3
Banaei Moghaddam, A.M.4
Dziurlikowska, A.5
Houben, D.A.6
-
139
-
-
2142653551
-
Interphase chromosomes and the Rabl configuration: Does genome size matter?
-
Santos AP, Shaw P (2004) Interphase chromosomes and the Rabl configuration: does genome size matter? J Microsc 214:201-206
-
(2004)
J Microsc
, vol.214
, pp. 201-206
-
-
Santos, A.P.1
Shaw, P.2
-
140
-
-
0036902097
-
The architecture of interphase chromosomes and gene positioning are altered by changes in DNA methylation and histone acetylation
-
Santos AP, Abranches R, Stroger E, Beven A, Viegas W, Shaw PJ (2002) The architecture of interphase chromosomes and gene positioning are altered by changes in DNA methylation and histone acetylation. J Cell Sci 115:4597-4605
-
(2002)
J Cell Sci
, vol.115
, pp. 4597-4605
-
-
Santos, A.P.1
Abranches, R.2
Stroger, E.3
Beven, A.4
Viegas, W.5
Shaw, P.J.6
-
141
-
-
79952744855
-
Differentiation of the maize subgenomes by genome dominance and both ancient and ongoing gene loss
-
Schnable JC, Springer NM, Freeling M (2011) Differentiation of the maize subgenomes by genome dominance and both ancient and ongoing gene loss. Proc Natl Acad Sci USA 108:4069-4074
-
(2011)
Proc Natl Acad Sci USA
, vol.108
, pp. 4069-4074
-
-
Schnable, J.C.1
Springer, N.M.2
Freeling, M.3
-
142
-
-
75849127045
-
High congruency of QTL positions for heterosis of grain yield in three crosses of maize
-
Schön CC, Dhillon BS, Utz HF, Melchinger AE (2010) High congruency of QTL positions for heterosis of grain yield in three crosses of maize. Theor Appl Genet 120:321-332
-
(2010)
Theor Appl Genet
, vol.120
, pp. 321-332
-
-
Schön, C.C.1
Dhillon, B.S.2
Utz, H.F.3
Melchinger, A.E.4
-
143
-
-
79955717546
-
Organization and dynamics of plant interphase chromosomes
-
Schubert I, Shaw P (2011) Organization and dynamics of plant interphase chromosomes. Trends Plant Sci 16:273-281
-
(2011)
Trends Plant Sci
, vol.16
, pp. 273-281
-
-
Schubert, I.1
Shaw, P.2
-
144
-
-
33644774529
-
Sister chromatids are often incompletely aligned in meristematic and endopolyploid interphase nuclei of Arabidopsis thaliana
-
Schubert V, Klatte M, Pecinka A, Meister A, Jasencakova Z, Schubert I (2006) Sister chromatids are often incompletely aligned in meristematic and endopolyploid interphase nuclei of Arabidopsis thaliana. Genetics 172:467-475
-
(2006)
Genetics
, vol.172
, pp. 467-475
-
-
Schubert, V.1
Klatte, M.2
Pecinka, A.3
Meister, A.4
Jasencakova, Z.5
Schubert, I.6
-
145
-
-
0026555242
-
Parental genome separation in reconstruction of somatic and premeiotic metaphases of Hordeum vulgare × H. bulbosum
-
Schwarzacher T, Heslop-Harrison JS, Anamthawat-Jonsson K (1992) Parental genome separation in reconstruction of somatic and premeiotic metaphases of Hordeum vulgare × H. bulbosum. J Cell Sci 101:13-24
-
(1992)
J Cell Sci
, vol.101
, pp. 13-24
-
-
Schwarzacher, T.1
Heslop-Harrison, J.S.2
Anamthawat-Jonsson, K.3
-
146
-
-
0036372893
-
Repeat-induced gene silencing in fungi
-
Selker EU (2002) Repeat-induced gene silencing in fungi. Adv Genet 46:439-450
-
(2002)
Adv Genet
, vol.46
, pp. 439-450
-
-
Selker, E.U.1
-
147
-
-
0034866855
-
Sequence elimination and cytosine methylation are rapid and reproducible responses of the genome to wide hybridisation and allopolyploidy in wheat
-
Shaked H, Kashkush K, Ozkan H, Feldman M, Levy AA (2001) Sequence elimination and cytosine methylation are rapid and reproducible responses of the genome to wide hybridisation and allopolyploidy in wheat. Plant Cell 13:1749-1759
-
(2001)
Plant Cell
, vol.13
, pp. 1749-1759
-
-
Shaked, H.1
Kashkush, K.2
Ozkan, H.3
Feldman, M.4
Levy, A.A.5
-
148
-
-
33644765887
-
Unique evolutionary mechanism in R-genes under the presence/absence polymorphism in Arabidopsis thaliana
-
Shen J, Araki H, Chen L, Chen JQ, Tian D (2006) Unique evolutionary mechanism in R-genes under the presence/absence polymorphism in Arabidopsis thaliana. Genetics 172:1243-1250
-
(2006)
Genetics
, vol.172
, pp. 1243-1250
-
-
Shen, J.1
Araki, H.2
Chen, L.3
Chen, J.Q.4
Tian, D.5
-
149
-
-
33746450910
-
Partitioning of the maize epigenome by the number of methyl groups on histone H3 lysines 9 and 27
-
Shi JH, Dawe RK (2006) Partitioning of the maize epigenome by the number of methyl groups on histone H3 lysines 9 and 27. Genetics 173:1571-1583
-
(2006)
Genetics
, vol.173
, pp. 1571-1583
-
-
Shi, J.H.1
Dawe, R.K.2
-
150
-
-
84924269561
-
What is “heterosis”?
-
Shull GH (1948) What is “heterosis”? Genetics 33:439-446
-
(1948)
Genetics
, vol.33
, pp. 439-446
-
-
Shull, G.H.1
-
151
-
-
84948086883
-
The impact of transposable elements on gene and genome evolution
-
Wendel JF, Greilhuber J, Doležel J, Leitch IJ (eds), Springer-Verlag, Wien
-
Slotkin RK, Nuthikattu S, Jiang N (2012) The impact of transposable elements on gene and genome evolution. In: Wendel JF, Greilhuber J, Doležel J, Leitch IJ (eds) Plant genome diversity, vol 1, Plant genomes, their residents, and their evolutionary dynamics. Springer-Verlag, Wien, pp 35-58
-
(2012)
Plant genome diversity, vol 1, Plant genomes, their residents, and their evolutionary dynamics
, pp. 35-58
-
-
Slotkin, R.K.1
Nuthikattu, S.2
Jiang, N.3
-
152
-
-
67651052323
-
The role of hybridization in plant speciation
-
Soltis PS, Soltis DE (2009) The role of hybridization in plant speciation. Annu Rev Plant Biol 60:561-588
-
(2009)
Annu Rev Plant Biol
, vol.60
, pp. 561-588
-
-
Soltis, P.S.1
Soltis, D.E.2
-
153
-
-
60249085527
-
Polyploidy and angiosperm diversification
-
Soltis DE, Albert VA, Leebens-Mack J, Bell CD, Paterson AH, Zheng C, Sankoff D, Depamphilis CW, Wall PK, Soltis PS (2009) Polyploidy and angiosperm diversification. Am J Bot 96:336-348
-
(2009)
Am J Bot
, vol.96
, pp. 336-348
-
-
Soltis, D.E.1
Albert, V.A.2
Leebens-Mack, J.3
Bell, C.D.4
Paterson, A.H.5
Zheng, C.6
Sankoff, D.7
Depamphilis, C.W.8
Wall, P.K.9
Soltis, P.S.10
-
154
-
-
0029162810
-
Rapid genome change in synthetic polyploids of Brassica and its implications for polyploid evolution
-
Song KM, Lu P, Tang KL, Osborn TC (1995) Rapid genome change in synthetic polyploids of Brassica and its implications for polyploid evolution. Proc Natl Acad Sci USA 92:7719-7723
-
(1995)
Proc Natl Acad Sci USA
, vol.92
, pp. 7719-7723
-
-
Song, K.M.1
Lu, P.2
Tang, K.L.3
Osborn, T.C.4
-
155
-
-
0037011060
-
DNA methylation controls histone H3 lysine 9 methylation and heterochromatin assembly in Arabidopsis
-
SoppeWJ, Jasencakova Z, HoubenA, Kakutani T, MeisterA, HuangMS, Jacobsen SE, Schubert I, Fransz PF (2002) DNA methylation controls histone H3 lysine 9 methylation and heterochromatin assembly in Arabidopsis. EMBO J 21:6549-6559
-
(2002)
EMBO J
, vol.21
, pp. 6549-6559
-
-
Soppe, W.J.1
Jasencakova, Z.2
Houben, A.3
Kakutani, T.4
Meister, A.5
Huang, M.S.6
Jacobsen, S.E.7
Schubert, I.8
Fransz, P.F.9
-
156
-
-
73649121258
-
Maize inbreds exhibit high levels of copy number variation (CNV) and presence/absence variation (PAV) in genome content
-
Springer NM, Ying K, Fu Y, Ji T, Yeh CT, Jia Y, Wu W, Richmond T, Kitzman J, Rosenbaum H, Iniguez AL, Barbazuk WB, Jeddeloh JA, Nettleton D, Schnable PS (2009) Maize inbreds exhibit high levels of copy number variation (CNV) and presence/absence variation (PAV) in genome content. PLoS Genet 5:e1000734
-
(2009)
PLoS Genet
, vol.5
-
-
Springer, N.M.1
Ying, K.2
Fu, Y.3
Ji, T.4
Yeh, C.T.5
Jia, Y.6
Wu, W.7
Richmond, T.8
Kitzman, J.9
Rosenbaum, H.10
Iniguez, A.L.11
Barbazuk, W.B.12
Jeddeloh, J.A.13
Nettleton, D.14
Schnable, P.S.15
-
157
-
-
33747866029
-
Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression patterns in the F-1 hybrid
-
Stupar RM, Springer NM (2006) Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression patterns in the F-1 hybrid. Genetics 173:2199-2210
-
(2006)
Genetics
, vol.173
, pp. 2199-2210
-
-
Stupar, R.M.1
Springer, N.M.2
-
158
-
-
34548379504
-
Phenotypic and transcriptomic changes associated with potato autopolyploidization
-
Stupar RM, Bhaskar PB, Yandell BS, Rensink WA, Hart AL, Ouyang S, Veilleux RE, Busse JS, Erhardt RJ, Buell CR, Jiang J (2007) Phenotypic and transcriptomic changes associated with potato autopolyploidization. Genetics 176:2055-2067
-
(2007)
Genetics
, vol.176
, pp. 2055-2067
-
-
Stupar, R.M.1
Bhaskar, P.B.2
Yandell, B.S.3
Rensink, W.A.4
Hart, A.L.5
Ouyang, S.6
Veilleux, R.E.7
Busse, J.S.8
Erhardt, R.J.9
Buell, C.R.10
Jiang, J.11
-
159
-
-
43149100157
-
Gene expression analyses in maize inbreds and hybrids with varying levels of heterosis
-
Stupar RM, Gardiner JM, Oldre AG, Haun WJ, Chandler VL, Springer NM (2008) Gene expression analyses in maize inbreds and hybrids with varying levels of heterosis. BMC Plant Biol 8:33
-
(2008)
BMC Plant Biol
, vol.8
, pp. 33
-
-
Stupar, R.M.1
Gardiner, J.M.2
Oldre, A.G.3
Haun, W.J.4
Chandler, V.L.5
Springer, N.M.6
-
160
-
-
52449132063
-
Insertion DNA promotes ectopic recombination during meiosis in Arabidopsis
-
SunX, Zhang Y, Yang S, Chen JQ, HohnB, TianD(2008) Insertion DNA promotes ectopic recombination during meiosis in Arabidopsis. Mol Biol Evol 25:2079-2083
-
(2008)
Mol Biol Evol
, vol.25
, pp. 2079-2083
-
-
Sun, X.1
Zhang, Y.2
Yang, S.3
Chen, J.Q.4
Hohn, B.5
Tian, D.6
-
161
-
-
78549273825
-
Pervasive gene content variation and copy number variation in maize and its undomesticated progenitor
-
Swanson-Wagner RA, Eichten SR, Kumari S, Tiffin P, Stein JC, Ware D, Springer NM (2010) Pervasive gene content variation and copy number variation in maize and its undomesticated progenitor. Genome Res 20:1689-1699
-
(2010)
Genome Res
, vol.20
, pp. 1689-1699
-
-
Swanson-Wagner, R.A.1
Eichten, S.R.2
Kumari, S.3
Tiffin, P.4
Stein, J.C.5
Ware, D.6
Springer, N.M.7
-
162
-
-
34249812366
-
Lightregulated large-scale reorganization of chromatin during the floral transition in Arabidopsis
-
Tessadori F, Schulkes RK, van Driel R, Fransz P (2007) Lightregulated large-scale reorganization of chromatin during the floral transition in Arabidopsis. Plant J 50:848-857
-
(2007)
Plant J
, vol.50
, pp. 848-857
-
-
Tessadori, F.1
Schulkes, R.K.2
van Driel, R.3
Fransz, P.4
-
163
-
-
6844239462
-
Chromosome elimination in Hordeum vulgare × H. bulbosum hybrids. I. Comparisons of stable and unstable amphiploids
-
Thomas HM, Pickering RA (1983) Chromosome elimination in Hordeum vulgare × H. bulbosum hybrids. I. Comparisons of stable and unstable amphiploids. Theor Appl Genet 66:135-140
-
(1983)
Theor Appl Genet
, vol.66
, pp. 135-140
-
-
Thomas, H.M.1
Pickering, R.A.2
-
164
-
-
79952322222
-
Exceptional lability of a genomic complex in rice and its close relatives revealed by interspecific and intraspecific comparison and population analysis
-
Tian Z, Yu Y, Lin F, Yu Y, Sanmiguel PJ, Wing RA, McCouch SR, Ma J, Jackson SA (2011) Exceptional lability of a genomic complex in rice and its close relatives revealed by interspecific and intraspecific comparison and population analysis. BMC Genomics 12:142
-
(2011)
BMC Genomics
, vol.12
, pp. 142
-
-
Tian, Z.1
Yu, Y.2
Lin, F.3
Yu, Y.4
Sanmiguel, P.J.5
Wing, R.A.6
McCouch, S.R.7
Ma, J.8
Jackson, S.A.9
-
165
-
-
77953198418
-
Natural allelic variation underlying a major fitness trade-off in Arabidopsis thaliana
-
Todesco M, Balasubramanian S, Hu TT, Traw MB, Horton M, Epple P, Kuhns C, Sureshkumar S, Schwartz C, Lanz C, Laitinen RA, Huang Y, Chory J, Lipka V, Borevitz JO, Dangl JL, Bergelson J, Nordborg M, Weigel D (2010) Natural allelic variation underlying a major fitness trade-off in Arabidopsis thaliana. Nature 465:632-636
-
(2010)
Nature
, vol.465
, pp. 632-636
-
-
Todesco, M.1
Balasubramanian, S.2
Hu, T.T.3
Traw, M.B.4
Horton, M.5
Epple, P.6
Kuhns, C.7
Sureshkumar, S.8
Schwartz, C.9
Lanz, C.10
Laitinen, R.A.11
Huang, Y.12
Chory, J.13
Lipka, V.14
Borevitz, J.O.15
Dangl, J.L.16
Bergelson, J.17
Nordborg, M.18
Weigel, D.19
-
166
-
-
77954737048
-
Intersections between immune responses and morphological regulation in plants
-
Uchida N, Tasaka M (2010) Intersections between immune responses and morphological regulation in plants. J Exp Bot 61:2539-2547
-
(2010)
J Exp Bot
, vol.61
, pp. 2539-2547
-
-
Uchida, N.1
Tasaka, M.2
-
167
-
-
33750018038
-
Genome expansion in three hybrid sunflower species is associated with retrotransposon proliferation
-
Ungerer MC, Strakosh SC, Zhen Y (2007) Genome expansion in three hybrid sunflower species is associated with retrotransposon proliferation. Curr Biol 16:R872-R873
-
(2007)
Curr Biol
, vol.16
, pp. R872-R873
-
-
Ungerer, M.C.1
Strakosh, S.C.2
Zhen, Y.3
-
168
-
-
56649102410
-
Evolution of Arabidopsis MIR genes generates novel microRNA classes
-
Vazquez F, Blevins T, Ailhas J, Boller T, Meins F Jr (2008) Evolution of Arabidopsis MIR genes generates novel microRNA classes. Nucleic Acids Res 36:6429-6438
-
(2008)
Nucleic Acids Res
, vol.36
, pp. 6429-6438
-
-
Vazquez, F.1
Blevins, T.2
Ailhas, J.3
Boller, T.4
Meins, F.5
-
169
-
-
77949336019
-
Stress-induced DNA methylation changes and their heritability in asexual dandelions
-
Verhoeven KJ, Jansen JJ, van Dijk PJ, Biere A (2010) Stress-induced DNA methylation changes and their heritability in asexual dandelions. New Phytol 185:1108-1118
-
(2010)
New Phytol
, vol.185
, pp. 1108-1118
-
-
Verhoeven, K.J.1
Jansen, J.J.2
van Dijk, P.J.3
Biere, A.4
-
170
-
-
70450202144
-
The Palomero genome suggests metal effects on domestication
-
Vielle-Calzada JP, Martínez de laVegaO, Hernández-Guzmán G, Ibarra-Laclette E, Alvarez-Mejía C, Vega-Arreguín JC, Jiménez-Moraila B, Fernández-Cortés A, Corona-Armenta G, Herrera-Estrella L, Herrera-Estrella A (2009) The Palomero genome suggests metal effects on domestication. Science 326:1078
-
(2009)
Science
, vol.326
-
-
Vielle-Calzada, J.P.1
Martínez de laVega, O.2
Hernández-Guzmán, G.3
Ibarra-Laclette, E.4
Alvarez-Mejía, C.5
Vega-Arreguín, J.C.6
Jiménez-Moraila, B.7
Fernández-Cortés, A.8
Corona-Armenta, G.9
Herrera-Estrella, L.10
Herrera-Estrella, A.11
-
171
-
-
32544437127
-
Genetic analysis of variation in gene expression in Arabidopsis thaliana
-
Vuylsteke M, van Eeuwijk F, Van Hummelen P, Kuiper M, Zabeau M (2005) Genetic analysis of variation in gene expression in Arabidopsis thaliana. Genetics 171:1267-1275
-
(2005)
Genetics
, vol.171
, pp. 1267-1275
-
-
Vuylsteke, M.1
van Eeuwijk, F.2
Van Hummelen, P.3
Kuiper, M.4
Zabeau, M.5
-
172
-
-
33845215653
-
Remarkable variation in maize genome structure inferred from haplotype diversity at the bz locus
-
Wang Q, Dooner HK (2006) Remarkable variation in maize genome structure inferred from haplotype diversity at the bz locus. Proc Natl Acad Sci USA 103:17644-17649
-
(2006)
Proc Natl Acad Sci USA
, vol.103
, pp. 17644-17649
-
-
Wang, Q.1
Dooner, H.K.2
-
173
-
-
33644762929
-
Genome-wide nonadditive genes regulation in Arabidopsis allotetraploids
-
Wang J, Tian L, Lee HS, Wei NE, Jiang H, Watson B, Madlung A, Osborn TC, Doerge RW, Comai L, Chen ZJ (2006) Genome-wide nonadditive genes regulation in Arabidopsis allotetraploids. Genetics 17:507-517
-
(2006)
Genetics
, vol.17
, pp. 507-517
-
-
Wang, J.1
Tian, L.2
Lee, H.S.3
Wei, N.E.4
Jiang, H.5
Watson, B.6
Madlung, A.7
Osborn, T.C.8
Doerge, R.W.9
Comai, L.10
Chen, Z.J.11
-
174
-
-
77957143178
-
Multilocus analysis of genetic divergence between outcrossing Arabidopsis species: Evidence of genome-wide admixture
-
Wang WK, Ho CW, Hung KH, Wang KH, Huang CC, Araki H, Hwang CC, Hsu TW, Osada N, Chiang TY (2010) Multilocus analysis of genetic divergence between outcrossing Arabidopsis species: evidence of genome-wide admixture. New Phytol 188:488-500
-
(2010)
New Phytol
, vol.188
, pp. 488-500
-
-
Wang, W.K.1
Ho, C.W.2
Hung, K.H.3
Wang, K.H.4
Huang, C.C.5
Araki, H.6
Hwang, C.C.7
Hsu, T.W.8
Osada, N.9
Chiang, T.Y.10
-
175
-
-
58449108368
-
Analysis of intraspecies diversity in wheat and barley genomes identifies breakpoints of ancient haplotypes and provides insight into the structure of diploid and hexaploid Triticeae gene pools
-
Wicker T, Krattinger SG, Lagudah ES, Komatsuda T, Pourkheirandish M, Matsumoto T, Cloutier S, Reiser L, Kanamori H, Sato K, Perovic D, Stein N, Keller B (2009) Analysis of intraspecies diversity in wheat and barley genomes identifies breakpoints of ancient haplotypes and provides insight into the structure of diploid and hexaploid Triticeae gene pools. Plant Physiol 149:258-270
-
(2009)
Plant Physiol
, vol.149
, pp. 258-270
-
-
Wicker, T.1
Krattinger, S.G.2
Lagudah, E.S.3
Komatsuda, T.4
Pourkheirandish, M.5
Matsumoto, T.6
Cloutier, S.7
Reiser, L.8
Kanamori, H.9
Sato, K.10
Perovic, D.11
Stein, N.12
Keller, B.13
-
176
-
-
3042569650
-
Coexpression of neighbouring genes in the genome of Arabidopisis thaliana
-
Williams EJB, Bowles DJ (2004) Coexpression of neighbouring genes in the genome of Arabidopisis thaliana. Genome Res 14:1060-1067
-
(2004)
Genome Res
, vol.14
, pp. 1060-1067
-
-
Williams, E.J.B.1
Bowles, D.J.2
-
177
-
-
79955523870
-
Compact genomes and complex evolution in the genus Brachypodium
-
Wolny E, LesniewskaK, HasterokR, Langdon T (2011) Compact genomes and complex evolution in the genus Brachypodium. Chromosoma 120:199-212
-
(2011)
Chromosoma
, vol.120
, pp. 199-212
-
-
Wolny, E.1
Lesniewska, K.2
Hasterok, R.3
Langdon, T.4
-
179
-
-
70349694563
-
Mitotic instability in resynthesised and natural polyploids of the genus Arabidopsis (Brassicaceae)
-
Wright KM, Pires C, Madlung A (2009) Mitotic instability in resynthesised and natural polyploids of the genus Arabidopsis (Brassicaceae). Am J Bot 96:1656-1664
-
(2009)
Am J Bot
, vol.96
, pp. 1656-1664
-
-
Wright, K.M.1
Pires, C.2
Madlung, A.3
-
180
-
-
79959256918
-
Methylation transcription and rearrangements of transposable elements in synthetic allopolyploids
-
Yaakov B, Kashkush K (2011) Methylation transcription and rearrangements of transposable elements in synthetic allopolyploids. Int J Plant Genomics. Article ID 569826. doi:10.1155/2011/569826
-
(2011)
Int J Plant Genomics
-
-
Yaakov, B.1
Kashkush, K.2
-
181
-
-
73249116559
-
Comparison of diverse developmental transcriptomes reveals that coexpression of gene neighbors is not evolutionarily conserved
-
Yanai I, Hunter CP (2009) Comparison of diverse developmental transcriptomes reveals that coexpression of gene neighbors is not evolutionarily conserved. Genome Res 19:2214-2220
-
(2009)
Genome Res
, vol.19
, pp. 2214-2220
-
-
Yanai, I.1
Hunter, C.P.2
-
182
-
-
35748936460
-
A cluster of disease resistance genes in Arabidopsis is coordinately regulated by transcriptional activation and RNA silencing
-
Yi H, Richards EJ (2007) A cluster of disease resistance genes in Arabidopsis is coordinately regulated by transcriptional activation and RNA silencing. Plant Cell 19:2929-2939
-
(2007)
Plant Cell
, vol.19
, pp. 2929-2939
-
-
Yi, H.1
Richards, E.J.2
-
183
-
-
44849134096
-
Detecting polymorphic regions in Arabidopsis thaliana with resequencing microarrays
-
Zeller G, Clark RM, Schneeberger K, Bohlen A, Weigel D, Rätsch G (2008) Detecting polymorphic regions in Arabidopsis thaliana with resequencing microarrays. Genome Res 18:918-929
-
(2008)
Genome Res
, vol.18
, pp. 918-929
-
-
Zeller, G.1
Clark, R.M.2
Schneeberger, K.3
Bohlen, A.4
Weigel, D.5
Rätsch, G.6
-
184
-
-
34248340993
-
Role of RNA polymerase IV in plant small RNA metabolism
-
Zhang X, Henderson IR, Lu C, Green PJ, Jacobsen SE (2007) Role of RNA polymerase IV in plant small RNA metabolism. Proc Natl Acad Sci USA 104:4536-4541
-
(2007)
Proc Natl Acad Sci USA
, vol.104
, pp. 4536-4541
-
-
Zhang, X.1
Henderson, I.R.2
Lu, C.3
Green, P.J.4
Jacobsen, S.E.5
-
185
-
-
57849136008
-
Whole genome transcriptome polymorphisms in Arabidopsis thaliana
-
Zhang X, Byrnes JK, Gal TS, Li WH, Borevitz JO (2008a) Whole genome transcriptome polymorphisms in Arabidopsis thaliana. Genome Biol 9:R165
-
(2008)
Genome Biol
, vol.9
-
-
Zhang, X.1
Byrnes, J.K.2
Gal, T.S.3
Li, W.H.4
Borevitz, J.O.5
-
186
-
-
52049084999
-
The origin of a ‘Zebra’ chromosome in wheat suggests nonhomologous recombination as a novel mechanism for new chromosome evolution and step changes in chromosome number
-
Zhang P, Li W, Friebe B, Gill BS (2008b) The origin of a ‘Zebra’ chromosome in wheat suggests nonhomologous recombination as a novel mechanism for new chromosome evolution and step changes in chromosome number. Genetics 179:1169-1177
-
(2008)
Genetics
, vol.179
, pp. 1169-1177
-
-
Zhang, P.1
Li, W.2
Friebe, B.3
Gill, B.S.4
-
187
-
-
77955478517
-
Rapid genomic alteration in an ‘incompatible’ pair of maize reciprocal F(1) hybrids - a possible cause for the accumulation of inter-strain genetic diversity
-
Zhao XX, Chai Y, Wang HY, Zhao N, Liu B (2010) Rapid genomic alteration in an ‘incompatible’ pair of maize reciprocal F(1) hybrids - a possible cause for the accumulation of inter-strain genetic diversity. Hereditas 147:1-9
-
(2010)
Hereditas
, vol.147
, pp. 1-9
-
-
Zhao, X.X.1
Chai, Y.2
Wang, H.Y.3
Zhao, N.4
Liu, B.5
-
188
-
-
72849124237
-
Intergenic transcription by RNA Polymerase II coordinates Pol IV and Pol V in siRNA-directed transcriptional gene silencing in Arabidopsis
-
Zheng B, Wang Z, Li S, Yu B, Liu JY, Chen X (2009) Intergenic transcription by RNA Polymerase II coordinates Pol IV and Pol V in siRNA-directed transcriptional gene silencing in Arabidopsis. Genes Dev 23:2850-2860
-
(2009)
Genes Dev
, vol.23
, pp. 2850-2860
-
-
Zheng, B.1
Wang, Z.2
Li, S.3
Yu, B.4
Liu, J.Y.5
Chen, X.6
-
189
-
-
0031869154
-
Genome recombination in intergeneric hybrids between tetraploid Festuca pratensis and Lolium multiflorum
-
Zwierzykowski Z, Tayyar R, Brunell M, Lukaszewski AJ (1998) Genome recombination in intergeneric hybrids between tetraploid Festuca pratensis and Lolium multiflorum. J Hered 89: 324-328
-
(1998)
J Hered
, vol.89
, pp. 324-328
-
-
Zwierzykowski, Z.1
Tayyar, R.2
Brunell, M.3
Lukaszewski, A.J.4
-
190
-
-
33745836363
-
Genome balance in six successive generations of the allotetraploid Festuca pratensis × Lolium perenne
-
Zwierzykowski Z, Kosmala A, Zwierzykowska E, Jones RN, Jokś W, Bocianowski J (2006) Genome balance in six successive generations of the allotetraploid Festuca pratensis × Lolium perenne. Theor Appl Genet 113:539-547
-
(2006)
Theor Appl Genet
, vol.113
, pp. 539-547
-
-
Zwierzykowski, Z.1
Kosmala, A.2
Zwierzykowska, E.3
Jones, R.N.4
Jokś, W.5
Bocianowski, J.6
|