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Volumn 185, Issue 4, 2010, Pages 1108-1118

Stress-induced DNA methylation changes and their heritability in asexual dandelions

Author keywords

Abiotic stress; Apomixis; DNA methylation; Epigenetic inheritance; Jasmonic acid; Methylation sensitive amplified fragment length polymorphism; Salicylic acid; Taraxacum officinale (dandelion)

Indexed keywords

CYCLOPENTANE DERIVATIVE; JASMONIC ACID; OXYLIPIN; SALICYLIC ACID; SODIUM CHLORIDE;

EID: 77949336019     PISSN: 0028646X     EISSN: 14698137     Source Type: Journal    
DOI: 10.1111/j.1469-8137.2009.03121.x     Document Type: Article
Times cited : (492)

References (70)
  • 1
    • 24644457076 scopus 로고    scopus 로고
    • Novel patterns of gene expression in polyploid plants
    • Adams KL, Wendel JF. Novel patterns of gene expression in polyploid plants. Trends in Genetics 2005, 21:539-543.
    • (2005) Trends in Genetics , vol.21 , pp. 539-543
    • Adams, K.L.1    Wendel, J.F.2
  • 6
    • 34247107485 scopus 로고    scopus 로고
    • Transgenerational changes in the genome stability and methylation in pathogen-infected plants (virus-induced plant genome instability)
    • Boyko A, Kathiria P, Zemp FJ, Yao YL, Pogribny I, Kovalchuk I. Transgenerational changes in the genome stability and methylation in pathogen-infected plants (virus-induced plant genome instability). Nucleic Acids Research 2007, 35:1714-1725.
    • (2007) Nucleic Acids Research , vol.35 , pp. 1714-1725
    • Boyko, A.1    Kathiria, P.2    Zemp, F.J.3    Yao, Y.L.4    Pogribny, I.5    Kovalchuk, I.6
  • 7
    • 0033800838 scopus 로고    scopus 로고
    • Stress and transposable elements: co-evolution or useful parasites?
    • Capy P, Gasperi G, Biemont C, Bazin C. Stress and transposable elements: co-evolution or useful parasites? Heredity 2000, 85:101-106.
    • (2000) Heredity , vol.85 , pp. 101-106
    • Capy, P.1    Gasperi, G.2    Biemont, C.3    Bazin, C.4
  • 8
    • 0032883574 scopus 로고    scopus 로고
    • AFLP markers in a molecular linkage map of maize: codominant scoring and linkage group distribution
    • Castiglioni P, Ajmone-Marsan P, van Wijk R, Motto M. AFLP markers in a molecular linkage map of maize: codominant scoring and linkage group distribution. Theoretical and Applied Genetics 1999, 99:425-431.
    • (1999) Theoretical and Applied Genetics , vol.99 , pp. 425-431
    • Castiglioni, P.1    Ajmone-Marsan, P.2    van Wijk, R.3    Motto, M.4
  • 10
    • 34248328910 scopus 로고    scopus 로고
    • Genetic and epigenetic mechanisms for gene expression and phenotypic variation in plant polyploids
    • Chen ZJ. Genetic and epigenetic mechanisms for gene expression and phenotypic variation in plant polyploids. Annual Review of Plant Biology 2007, 58:377-406.
    • (2007) Annual Review of Plant Biology , vol.58 , pp. 377-406
    • Chen, Z.J.1
  • 11
  • 12
    • 34247399015 scopus 로고    scopus 로고
    • Abiotic-stress induces demethylation and transcriptional activation of a gene encoding a glycerophosphodiesterase-like protein in tobacco plants
    • Choi CS, Sano H. Abiotic-stress induces demethylation and transcriptional activation of a gene encoding a glycerophosphodiesterase-like protein in tobacco plants. Molecular Genetics and Genomics 2007, 277:589-600.
    • (2007) Molecular Genetics and Genomics , vol.277 , pp. 589-600
    • Choi, C.S.1    Sano, H.2
  • 14
    • 0033539183 scopus 로고    scopus 로고
    • An epigenetic mutation responsible for natural variation in floral symmetry
    • Cubas P, Vincent C, Coen E. An epigenetic mutation responsible for natural variation in floral symmetry. Nature 1999, 401:157-161.
    • (1999) Nature , vol.401 , pp. 157-161
    • Cubas, P.1    Vincent, C.2    Coen, E.3
  • 16
    • 0033451748 scopus 로고    scopus 로고
    • Crosses between sexual and apomictic dandelions (Taraxacum). II. The breakdown of apomixis
    • van Dijk PJ, Tas ICQ, Falque M, Bakx-Schotman T. Crosses between sexual and apomictic dandelions (Taraxacum). II. The breakdown of apomixis. Heredity 1999, 83:715-721.
    • (1999) Heredity , vol.83 , pp. 715-721
    • van Dijk, P.J.1    Tas, I.C.Q.2    Falque, M.3    Bakx-Schotman, T.4
  • 17
    • 33745482934 scopus 로고    scopus 로고
    • Extent and pattern of DNA methylation alteration in rice lines derived from introgressive hybridization of rice and Zizania latifolia Griseb
    • Dong ZY, Wang YM, Zhang ZJ, Shen Y, Lin XY, Ou XF, Han FP, Liu B. Extent and pattern of DNA methylation alteration in rice lines derived from introgressive hybridization of rice and Zizania latifolia Griseb. Theoretical and Applied Genetics 2006, 113:196-205.
    • (2006) Theoretical and Applied Genetics , vol.113 , pp. 196-205
    • Dong, Z.Y.1    Wang, Y.M.2    Zhang, Z.J.3    Shen, Y.4    Lin, X.Y.5    Ou, X.F.6    Han, F.P.7    Liu, B.8
  • 18
    • 0000479431 scopus 로고
    • A rapid total DNA preparation procedure for fresh plant tissue
    • Doyle JJ, Doyle JL. A rapid total DNA preparation procedure for fresh plant tissue. Focus 1990, 12:13-15.
    • (1990) Focus , vol.12 , pp. 13-15
    • Doyle, J.J.1    Doyle, J.L.2
  • 20
    • 0003242435 scopus 로고
    • The jackknife, the bootstrap, and other resampling plans
    • CBMS-NSF Regional Conference Series in Applied Mathematics 38, Society for Industrial and Applied Mathematics, Philadelphia PA, USA.
    • Efron B. The jackknife, the bootstrap, and other resampling plans. 1982, CBMS-NSF Regional Conference Series in Applied Mathematics 38, Society for Industrial and Applied Mathematics, Philadelphia PA, USA.
    • (1982)
    • Efron, B.1
  • 22
    • 0034761275 scopus 로고    scopus 로고
    • Parental environmental effects on life history in the herbaceous plant Campanula americana
    • Galloway LF. Parental environmental effects on life history in the herbaceous plant Campanula americana. Ecology 2001, 82:2781-2789.
    • (2001) Ecology , vol.82 , pp. 2781-2789
    • Galloway, L.F.1
  • 23
    • 0029668107 scopus 로고    scopus 로고
    • Plasticity in root shoot partitioning: optimal, ontogenetic, or both?
    • Gedroc JJ, McConnaughay KDM, Coleman JS. Plasticity in root shoot partitioning: optimal, ontogenetic, or both? Functional Ecology 1996, 10:44-50.
    • (1996) Functional Ecology , vol.10 , pp. 44-50
    • Gedroc, J.J.1    McConnaughay, K.D.M.2    Coleman, J.S.3
  • 24
    • 24944436247 scopus 로고    scopus 로고
    • Contrasting mechanisms of defense against biotrophic and necrotrophic pathogens
    • Glazebrook J. Contrasting mechanisms of defense against biotrophic and necrotrophic pathogens. Annual Review of Phytopathology 2005, 43:205-227.
    • (2005) Annual Review of Phytopathology , vol.43 , pp. 205-227
    • Glazebrook, J.1
  • 25
    • 29144499987 scopus 로고    scopus 로고
    • Epigenetics and its implications for plant biology 2. The 'epigenetic epiphany': epigenetics, evolution and beyond
    • Grant-Downton RT, Dickinson HG. Epigenetics and its implications for plant biology 2. The 'epigenetic epiphany': epigenetics, evolution and beyond. Annals of Botany 2006, 97:11-27.
    • (2006) Annals of Botany , vol.97 , pp. 11-27
    • Grant-Downton, R.T.1    Dickinson, H.G.2
  • 27
    • 34249330696 scopus 로고    scopus 로고
    • Epigenetic inheritance in plants
    • Henderson IR, Jacobsen SE. Epigenetic inheritance in plants. Nature 2007, 447:418-424.
    • (2007) Nature , vol.447 , pp. 418-424
    • Henderson, I.R.1    Jacobsen, S.E.2
  • 28
    • 35448947320 scopus 로고    scopus 로고
    • Within and between generation phenotypic plasticity in trichome density of Mimulus guttatus
    • Holeski LM. Within and between generation phenotypic plasticity in trichome density of Mimulus guttatus. Journal of Evolutionary Biology 2007, 20:2092-2100.
    • (2007) Journal of Evolutionary Biology , vol.20 , pp. 2092-2100
    • Holeski, L.M.1
  • 30
    • 68049107038 scopus 로고    scopus 로고
    • Transgenerational epigenetic inheritance: prevalence, mechanisms, and implications for the study of heredity and evolution
    • Jablonka E, Raz G. Transgenerational epigenetic inheritance: prevalence, mechanisms, and implications for the study of heredity and evolution. Quarterly Review of Biology 2009, 84:131-176.
    • (2009) Quarterly Review of Biology , vol.84 , pp. 131-176
    • Jablonka, E.1    Raz, G.2
  • 31
    • 54149109197 scopus 로고    scopus 로고
    • Epigenome dynamics: a quantitative genetics perspective
    • Johannes F, Colot V, Jansen RC. Epigenome dynamics: a quantitative genetics perspective. Nature Reviews Genetics 2008, 9:883-890.
    • (2008) Nature Reviews Genetics , vol.9 , pp. 883-890
    • Johannes, F.1    Colot, V.2    Jansen, R.C.3
  • 33
    • 0032939382 scopus 로고    scopus 로고
    • Meiotically and mitotically stable inheritance of DNA hypomethylation induced by ddm1 mutation of Arabidopsis thaliana
    • Kakutani T, Munakata K, Richards EJ, Hirochika H. Meiotically and mitotically stable inheritance of DNA hypomethylation induced by ddm1 mutation of Arabidopsis thaliana. Genetics 1999, 151:831-838.
    • (1999) Genetics , vol.151 , pp. 831-838
    • Kakutani, T.1    Munakata, K.2    Richards, E.J.3    Hirochika, H.4
  • 34
    • 2942598781 scopus 로고    scopus 로고
    • Epialleles via DNA methylation: consequences for plant evolution
    • Kalisz S, Purugganan MD. Epialleles via DNA methylation: consequences for plant evolution. Trends in Ecology & Evolution 2004, 19:309-314.
    • (2004) Trends in Ecology & Evolution , vol.19 , pp. 309-314
    • Kalisz, S.1    Purugganan, M.D.2
  • 37
    • 3843121977 scopus 로고    scopus 로고
    • Enhanced power of QTL detection for Fusarium head blight resistance in wheat by means of codominant scoring of hemizygous molecular markers
    • Klahr A, Mohler V, Herz M, Wenzel G, Schwarz G. Enhanced power of QTL detection for Fusarium head blight resistance in wheat by means of codominant scoring of hemizygous molecular markers. Molecular Breeding 2004, 13:289-300.
    • (2004) Molecular Breeding , vol.13 , pp. 289-300
    • Klahr, A.1    Mohler, V.2    Herz, M.3    Wenzel, G.4    Schwarz, G.5
  • 38
    • 0032815855 scopus 로고    scopus 로고
    • Listening to the silent genes: transgene silencing, gene regulation and pathogen control
    • Kooter JM, Matzke MA, Meyer P. Listening to the silent genes: transgene silencing, gene regulation and pathogen control. Trends in Plant Science 1999, 4:340-347.
    • (1999) Trends in Plant Science , vol.4 , pp. 340-347
    • Kooter, J.M.1    Matzke, M.A.2    Meyer, P.3
  • 39
    • 0003608388 scopus 로고
    • Multidimensional scaling
    • Sage University Paper Series on Quantitative Applications in the Social Sciences 07-011, Sage Publications, Newbury Park CA, USA
    • Kruskal JB, Wish M. Multidimensional scaling. 1978, Sage University Paper Series on Quantitative Applications in the Social Sciences 07-011, Sage Publications, Newbury Park CA, USA
    • (1978)
    • Kruskal, J.B.1    Wish, M.2
  • 43
    • 48849116261 scopus 로고    scopus 로고
    • Potentiality of methylation-sensitive amplification polymorphism (MSAP) in identifying genes involved in tomato response to tomato yellow leaf curl Sardinia virus
    • Mason G, Noris E, Lanteri S, Acquadro A, Accotto GP, Portis E. Potentiality of methylation-sensitive amplification polymorphism (MSAP) in identifying genes involved in tomato response to tomato yellow leaf curl Sardinia virus. Plant Molecular Biology Reporter 2008, 26:156-173.
    • (2008) Plant Molecular Biology Reporter , vol.26 , pp. 156-173
    • Mason, G.1    Noris, E.2    Lanteri, S.3    Acquadro, A.4    Accotto, G.P.5    Portis, E.6
  • 44
    • 0028060576 scopus 로고
    • Effect of site-specific modification on restriction endonucleases and DNA modification methyltransferases
    • McClelland M, Nelson M, Raschke E. Effect of site-specific modification on restriction endonucleases and DNA modification methyltransferases. Nucleic Acids Research 1994, 22:3640-3659.
    • (1994) Nucleic Acids Research , vol.22 , pp. 3640-3659
    • McClelland, M.1    Nelson, M.2    Raschke, E.3
  • 46
    • 0035837378 scopus 로고    scopus 로고
    • Mobilization of transposons by a mutation abolishing full DNA methylation in Arabidopsis
    • Miura A, Yonebayashi S, Watanabe K, Toyama T, Shimada H, Kakutani T. Mobilization of transposons by a mutation abolishing full DNA methylation in Arabidopsis. Nature 2001, 411:212-214.
    • (2001) Nature , vol.411 , pp. 212-214
    • Miura, A.1    Yonebayashi, S.2    Watanabe, K.3    Toyama, T.4    Shimada, H.5    Kakutani, T.6
  • 47
    • 33748324641 scopus 로고    scopus 로고
    • Transgeneration memory of stress in plants
    • Molinier J, Ries G, Zipfel C, Hohn B. Transgeneration memory of stress in plants. Nature 2006, 442:1046-1049.
    • (2006) Nature , vol.442 , pp. 1046-1049
    • Molinier, J.1    Ries, G.2    Zipfel, C.3    Hohn, B.4
  • 48
    • 34848847799 scopus 로고    scopus 로고
    • Genetic and epigenetic alterations after hybridization and genome doubling
    • Paun O, Fay MF, Soltis DE, Chase MW. Genetic and epigenetic alterations after hybridization and genome doubling. Taxon 2007, 56:649-656.
    • (2007) Taxon , vol.56 , pp. 649-656
    • Paun, O.1    Fay, M.F.2    Soltis, D.E.3    Chase, M.W.4
  • 49
    • 36549038968 scopus 로고    scopus 로고
    • Plant interactions with microbes and insects: from molecular mechanisms to ecology
    • Pieterse CMJ, Dicke M. Plant interactions with microbes and insects: from molecular mechanisms to ecology. Trends in Plant Science 2007, 12:564-569.
    • (2007) Trends in Plant Science , vol.12 , pp. 564-569
    • Pieterse, C.M.J.1    Dicke, M.2
  • 50
    • 29644435144 scopus 로고    scopus 로고
    • Epigenetics and plant evolution
    • Rapp RA, Wendel JF. Epigenetics and plant evolution. New Phytologist 2005, 168:81-91.
    • (2005) New Phytologist , vol.168 , pp. 81-91
    • Rapp, R.A.1    Wendel, J.F.2
  • 51
    • 0038718244 scopus 로고
    • A comparison of within-plant karyological heterogeneity between agamospermous and sexual Taraxacum (Compositae) as assessed by the nucleolar organizer chromosome
    • Richards AJ. A comparison of within-plant karyological heterogeneity between agamospermous and sexual Taraxacum (Compositae) as assessed by the nucleolar organizer chromosome. Plant Systematics and Evolution 1989, 163:177-185.
    • (1989) Plant Systematics and Evolution , vol.163 , pp. 177-185
    • Richards, A.J.1
  • 52
    • 33646193822 scopus 로고    scopus 로고
    • Inherited epigenetic variation - revisiting soft inheritance
    • Richards EJ. Inherited epigenetic variation - revisiting soft inheritance. Nature Reviews Genetics 2006, 7:395-401.
    • (2006) Nature Reviews Genetics , vol.7 , pp. 395-401
    • Richards, E.J.1
  • 54
    • 48249096880 scopus 로고    scopus 로고
    • Plasticity in salt tolerance traits allows for invasion of novel habitat by Japanese knotweed s. l. (Fallopia japonica and F. bohemica, Polygonaceae)
    • Richards CL, Walls RL, Bailey JP, Parameswaran R, George T, Pigliucci M. Plasticity in salt tolerance traits allows for invasion of novel habitat by Japanese knotweed s. l. (Fallopia japonica and F. bohemica, Polygonaceae). American Journal of Botany 2008, 95:931-942.
    • (2008) American Journal of Botany , vol.95 , pp. 931-942
    • Richards, C.L.1    Walls, R.L.2    Bailey, J.P.3    Parameswaran, R.4    George, T.5    Pigliucci, M.6
  • 56
    • 0036145567 scopus 로고    scopus 로고
    • Dynamic reprogramming of DNA methylation in the early mouse embryo
    • Santos F, Hendrich B, Reik W, Dean W. Dynamic reprogramming of DNA methylation in the early mouse embryo. Developmental Biology 2002, 241:172-182.
    • (2002) Developmental Biology , vol.241 , pp. 172-182
    • Santos, F.1    Hendrich, B.2    Reik, W.3    Dean, W.4
  • 58
    • 33947303168 scopus 로고    scopus 로고
    • Transposable elements and the epigenetic regulation of the genome
    • Slotkin RK, Martienssen R. Transposable elements and the epigenetic regulation of the genome. Nature Reviews Genetics 2007, 8:272-285.
    • (2007) Nature Reviews Genetics , vol.8 , pp. 272-285
    • Slotkin, R.K.1    Martienssen, R.2
  • 61
    • 0030441379 scopus 로고    scopus 로고
    • Phenotypic plasticity for offspring traits in Polygonum persicaria
    • Sultan SE. Phenotypic plasticity for offspring traits in Polygonum persicaria. Ecology 1996, 77:1791-1807.
    • (1996) Ecology , vol.77 , pp. 1791-1807
    • Sultan, S.E.1
  • 64
    • 73949158149 scopus 로고    scopus 로고
    • Changes in genomic methylation patterns during the formation of triploid asexual dandelion lineages
    • doi
    • Verhoeven KJF, van Dijk PJ, Biere A. Changes in genomic methylation patterns during the formation of triploid asexual dandelion lineages. Molecular Ecology 10.1111/j.1365-294X.2009.04460.x, doi
    • Molecular Ecology
    • Verhoeven, K.J.F.1    van Dijk, P.J.2    Biere, A.3
  • 65
    • 77349119451 scopus 로고    scopus 로고
    • Genetic linkage mapping of apomixis loci
    • Hörandl E, Grossniklaus U, van Dijk PJ, Sharbel TF. In, eds, Vienna, Austria, International Association for Plant Taxonomy
    • Vijverberg K, van Dijk PJ. Genetic linkage mapping of apomixis loci. Apomixis: evolution, mechanisms and perspectives 2007, 137-158. Hörandl E, Grossniklaus Uvan Dijk PJSharbel TF. In, eds, Vienna, Austria, International Association for Plant Taxonomy
    • (2007) Apomixis: evolution, mechanisms and perspectives , pp. 137-158
    • Vijverberg, K.1    van Dijk, P.J.2
  • 67
    • 4043127689 scopus 로고    scopus 로고
    • Association between up-regulation of stress-responsive genes and hypomethylation of genomic DNA in tobacco plants
    • Wada Y, Miyamoto K, Kusano T, Sano H. Association between up-regulation of stress-responsive genes and hypomethylation of genomic DNA in tobacco plants. Molecular Genetics and Genomics 2004, 271:658-666.
    • (2004) Molecular Genetics and Genomics , vol.271 , pp. 658-666
    • Wada, Y.1    Miyamoto, K.2    Kusano, T.3    Sano, H.4
  • 68
    • 68149092368 scopus 로고    scopus 로고
    • Adaptive epigenetic memory of ancestral temperature regime in Arabidopsis thaliana
    • Whittle CA, Otto SP, Johnston MO, Krochko JE. Adaptive epigenetic memory of ancestral temperature regime in Arabidopsis thaliana. Botany-Botanique 2009, 87:650-657.
    • (2009) Botany-Botanique , vol.87 , pp. 650-657
    • Whittle, C.A.1    Otto, S.P.2    Johnston, M.O.3    Krochko, J.E.4
  • 69
    • 42549085238 scopus 로고    scopus 로고
    • The epigenetic landscape of plants
    • Zhang XY. The epigenetic landscape of plants. Science 2008, 320:489-492.
    • (2008) Science , vol.320 , pp. 489-492
    • Zhang, X.Y.1
  • 70
    • 33845880624 scopus 로고    scopus 로고
    • Genome-wide analysis of Arabidopsis thaliana DNA methylation uncovers an interdependence between methylation and transcription
    • Zilberman D, Gehring M, Tran RK, Ballinger T, Henikoff S. Genome-wide analysis of Arabidopsis thaliana DNA methylation uncovers an interdependence between methylation and transcription. Nature Genetics 2007, 39:61-69.
    • (2007) Nature Genetics , vol.39 , pp. 61-69
    • Zilberman, D.1    Gehring, M.2    Tran, R.K.3    Ballinger, T.4    Henikoff, S.5


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