-
1
-
-
79955398591
-
Otto Warburg’s contributions to current concepts of cancer metabolism
-
Koppenol WH, Bounds PL, Dang CV, Otto Warburg’s contributions to current concepts of cancer metabolism. Nature reviews Cancer. 2011 May;11(5):325–37. Available from: http://dx.doi.org/10.1038/nrc3038. doi: 10.1038/nrc3038 21508971
-
(2011)
Nature reviews Cancer
, vol.11
, Issue.5
, pp. 325-337
-
-
Koppenol, W.H.1
Bounds, P.L.2
Dang, C.V.3
-
2
-
-
84860793042
-
Pyruvate kinase M2 promotes de novo serine synthesis to sustain mTORC1 activity and cell proliferation
-
Ye J, Mancuso A, Tong X, Ward PS, Fan J, Rabinowitz JD, et al. Pyruvate kinase M2 promotes de novo serine synthesis to sustain mTORC1 activity and cell proliferation. Proceedings of the National Academy of Sciences of the United States of America. 2012 May;109(18):6904–9. Available from: http://www.pnas.org/content/early/2012/04/10/1204176109. doi: 10.1073/pnas.1204176109 22509023
-
(2012)
Proceedings of the National Academy of Sciences of the United States of America
, vol.109
, Issue.18
, pp. 6904-6909
-
-
Ye, J.1
Mancuso, A.2
Tong, X.3
Ward, P.S.4
Fan, J.5
Rabinowitz, J.D.6
-
3
-
-
84858796262
-
IDH mutation impairs histone demethylation and results in a block to cell differentiation
-
Lu C, Ward PS, Kapoor GS, Rohle D, Turcan S, Abdel-Wahab O, et al. IDH mutation impairs histone demethylation and results in a block to cell differentiation. Nature. 2012 Mar;483(7390):474–8. Available from: http://www.pubmedcentral.nih.gov/articlerender.fcgi?artid=3478770\&tool=pmcentrez\&rendertype=abstract. doi: 10.1038/nature10860 22343901
-
(2012)
Nature
, vol.483
, Issue.7390
, pp. 474-478
-
-
Lu, C.1
Ward, P.S.2
Kapoor, G.S.3
Rohle, D.4
Turcan, S.5
Abdel-Wahab, O.6
-
4
-
-
84886002427
-
CorSig: a general framework for estimating statistical significance of correlation and its application to gene co-expression analysis
-
Wang HQ, Tsai CJ, CorSig: a general framework for estimating statistical significance of correlation and its application to gene co-expression analysis. PloS one. 2013 Jan;8(10):e77429. Available from: http://dx.plos.org/10.1371/journal.pone.0077429. doi: 10.1371/journal.pone.0077429 24194884
-
(2013)
PloS one
, vol.8
, Issue.10
, pp. e77429
-
-
Wang, H.Q.1
Tsai, C.J.2
-
5
-
-
84881476107
-
Integrative genomics identifies APOE ϵ4 effectors in Alzheimer’s disease
-
Rhinn H, Fujita R, Qiang L, Cheng R, Lee JH, Abeliovich A, Integrative genomics identifies APOE ϵ4 effectors in Alzheimer’s disease. Nature. 2013 Aug;500(7460):45–50. Available from: http://www.nature.com/nature/journal/v500/n7460/full/nature12415.html\#ref18. doi: 10.1038/nature12415 23883936
-
(2013)
Nature
, vol.500
, Issue.7460
, pp. 45-50
-
-
Rhinn, H.1
Fujita, R.2
Qiang, L.3
Cheng, R.4
Lee, J.H.5
Abeliovich, A.6
-
6
-
-
77950840239
-
Subspace differential coexpression analysis: problem definition and a general approach
-
Fang G, Kuang R, Pandey G, Steinbach M, Myers CL, Kumar V, Subspace differential coexpression analysis: problem definition and a general approach. Pacific Symposium on Biocomputing Pacific Symposium on Biocomputing. 2010 Jan;p. 145–56. Available from: http://www.ncbi.nlm.nih.gov/pubmed/19908367. 19908367
-
(2010)
Pacific Symposium on Biocomputing Pacific Symposium on Biocomputing
, pp. 145-156
-
-
Fang, G.1
Kuang, R.2
Pandey, G.3
Steinbach, M.4
Myers, C.L.5
Kumar, V.6
-
7
-
-
84875380606
-
DiffCorr: An R package to analyze and visualize differential correlations in biological networks
-
Chiang JH, Chang TH, Kao HY, Fukushima A, DiffCorr: An R package to analyze and visualize differential correlations in biological networks. Gene. 2013;518(1):209–214. Available from: http://www.sciencedirect.com/science/article/pii/S0378111912014497. doi: 10.1016/j.gene.2012.11.028
-
(2013)
Gene
, vol.518
, Issue.1
, pp. 209-214
-
-
Chiang, J.H.1
Chang, T.H.2
Kao, H.Y.3
Fukushima, A.4
-
8
-
-
33751327438
-
Comparative gene expression analysis by differential clustering approach: application to the Candida albicans transcription program
-
Ihmels J, Bergmann S, Berman J, Barkai N, Comparative gene expression analysis by differential clustering approach: application to the Candida albicans transcription program. PLoS genetics. 2005 Sep;1(3):e39. Available from: http://www.pubmedcentral.nih.gov/articlerender.fcgi?artid=1239936\&tool=pmcentrez\&rendertype=abstract. doi: 10.1371/journal.pgen.0010039 16470937
-
(2005)
PLoS genetics
, vol.1
, Issue.3
, pp. e39
-
-
Ihmels, J.1
Bergmann, S.2
Berman, J.3
Barkai, N.4
-
9
-
-
28944444652
-
Differential coexpression analysis using microarray data and its application to human cancer
-
Choi JK, Yu U, Yoo OJ, Kim S, Differential coexpression analysis using microarray data and its application to human cancer. Bioinformatics (Oxford, England). 2005 Dec;21(24):4348–55. Available from: http://bioinformatics.oxfordjournals.org/content/21/24/4348. doi: 10.1093/bioinformatics/bti722
-
(2005)
Bioinformatics (Oxford, England)
, vol.21
, Issue.24
, pp. 4348-4355
-
-
Choi, J.K.1
Yu, U.2
Yoo, O.J.3
Kim, S.4
-
10
-
-
77957813589
-
DCGL: an R package for identifying differentially coexpressed genes and links from gene expression microarray data
-
Liu BH, Yu H, Tu K, Li C, Li YX, Li YY, DCGL: an R package for identifying differentially coexpressed genes and links from gene expression microarray data. Bioinformatics (Oxford, England). 2010 Oct;26(20):2637–8. Available from: http://www.pubmedcentral.nih.gov/articlerender.fcgi?artid=2951087\&tool=pmcentrez\&rendertype=abstract. doi: 10.1093/bioinformatics/btq471
-
(2010)
Bioinformatics (Oxford, England)
, vol.26
, Issue.20
, pp. 2637-2638
-
-
Liu, B.H.1
Yu, H.2
Tu, K.3
Li, C.4
Li, Y.X.5
Li, Y.Y.6
-
11
-
-
84856094560
-
Differential network biology
-
Ideker T, Krogan NJ, Differential network biology. Molecular systems biology. 2012 Jan;8(1):565. Available from: http://msb.embopress.org/content/8/1/565.abstract. doi: 10.1038/msb.2011.99 22252388
-
(2012)
Molecular systems biology
, vol.8
, Issue.1
, pp. 565
-
-
Ideker, T.1
Krogan, N.J.2
-
12
-
-
84880321156
-
Heterogeneity of tumor-induced gene expression changes in the human metabolic network
-
Hu J, Locasale JW, Bielas JH, O’Sullivan J, Sheahan K, Cantley LC, et al. Heterogeneity of tumor-induced gene expression changes in the human metabolic network. Nature biotechnology. 2013 Jun;31(6):522–9. Available from: http://dx.doi.org/10.1038/nbt.2530. doi: 10.1038/nbt.2530 23604282
-
(2013)
Nature biotechnology
, vol.31
, Issue.6
, pp. 522-529
-
-
Hu, J.1
Locasale, J.W.2
Bielas, J.H.3
O’Sullivan, J.4
Sheahan, K.5
Cantley, L.C.6
-
13
-
-
84897414311
-
Metabolic enzyme expression highlights a key role for MTHFD2 and the mitochondrial folate pathway in cancer
-
Nilsson R, Jain M, Madhusudhan N, Sheppard NG, Strittmatter L, Kampf C, et al. Metabolic enzyme expression highlights a key role for MTHFD2 and the mitochondrial folate pathway in cancer. Nature communications. 2014 Jan;5:3128. Available from: http://www.nature.com/ncomms/2014/140123/ncomms4128/full/ncomms4128.html. doi: 10.1038/ncomms4128 24451681
-
(2014)
Nature communications
, vol.5
, pp. 3128
-
-
Nilsson, R.1
Jain, M.2
Madhusudhan, N.3
Sheppard, N.G.4
Strittmatter, L.5
Kampf, C.6
-
14
-
-
10244219943
-
A statistical method for identifying differential gene-gene co-expression patterns
-
Lai Y, Wu B, Chen L, Zhao H, A statistical method for identifying differential gene-gene co-expression patterns. Bioinformatics (Oxford, England). 2004 Nov;20(17):3146–55. Available from: http://bioinformatics.oxfordjournals.org/content/20/17/3146.short. doi: 10.1093/bioinformatics/bth379
-
(2004)
Bioinformatics (Oxford, England)
, vol.20
, Issue.17
, pp. 3146-3155
-
-
Lai, Y.1
Wu, B.2
Chen, L.3
Zhao, H.4
-
15
-
-
5044245707
-
Gene co-expression network topology provides a framework for molecular characterization of cellular state
-
Carter SL, Brechbühler CM, Griffin M, Bond AT, Gene co-expression network topology provides a framework for molecular characterization of cellular state. Bioinformatics (Oxford, England). 2004 Sep;20(14):2242–50. Available from: http://bioinformatics.oxfordjournals.org/content/20/14/2242. doi: 10.1093/bioinformatics/bth234
-
(2004)
Bioinformatics (Oxford, England)
, vol.20
, Issue.14
, pp. 2242-2250
-
-
Carter, S.L.1
Brechbühler, C.M.2
Griffin, M.3
Bond, A.T.4
-
16
-
-
84884541854
-
New network topology approaches reveal differential correlation patterns in breast cancer
-
Bockmayr M, Klauschen F, Györffy B, Denkert C, Budczies J, New network topology approaches reveal differential correlation patterns in breast cancer. BMC systems biology. 2013 Jan;7:78. Available from: http://www.pubmedcentral.nih.gov/articlerender.fcgi?artid=3848818\&tool=pmcentrez\&rendertype=abstract. doi: 10.1186/1752-0509-7-78 23945349
-
(2013)
BMC systems biology
, vol.7
, pp. 78
-
-
Bockmayr, M.1
Klauschen, F.2
Györffy, B.3
Denkert, C.4
Budczies, J.5
-
17
-
-
84875994305
-
Dissection of regulatory networks that are altered in disease via differential co-expression
-
Amar D, Safer H, Shamir R, Dissection of regulatory networks that are altered in disease via differential co-expression. PLoS computational biology. 2013 Jan;9(3):e1002955. Available from: http://www.pubmedcentral.nih.gov/articlerender.fcgi?artid=3591264\&tool=pmcentrez\&rendertype=abstract. doi: 10.1371/journal.pcbi.1002955 23505361
-
(2013)
PLoS computational biology
, vol.9
, Issue.3
, pp. e1002955
-
-
Amar, D.1
Safer, H.2
Shamir, R.3
-
18
-
-
67049159812
-
A differential wiring analysis of expression data correctly identifies the gene containing the causal mutation
-
Hudson NJ, Reverter A, Dalrymple BP, A differential wiring analysis of expression data correctly identifies the gene containing the causal mutation. PLoS computational biology. 2009 May;5(5):e1000382. Available from: http://dx.plos.org/10.1371/journal.pcbi.1000382. doi: 10.1371/journal.pcbi.1000382 19412532
-
(2009)
PLoS computational biology
, vol.5
, Issue.5
, pp. e1000382
-
-
Hudson, N.J.1
Reverter, A.2
Dalrymple, B.P.3
-
19
-
-
84877315835
-
A community-driven global reconstruction of human metabolism
-
Thiele I, Swainston N, Fleming RMT, Hoppe A, Sahoo S, Aurich MK, et al. A community-driven global reconstruction of human metabolism. Nature biotechnology. 2013 May;31(5):419–25. Available from: http://dx.doi.org/10.1038/nbt.2488. doi: 10.1038/nbt.2488 23455439
-
(2013)
Nature biotechnology
, vol.31
, Issue.5
, pp. 419-425
-
-
Thiele, I.1
Swainston, N.2
Fleming, R.M.T.3
Hoppe, A.4
Sahoo, S.5
Aurich, M.K.6
-
20
-
-
0043203327
-
Multiple hypothesis testing in microarray experiments
-
Dudoit S, Schaffer J, Boldrick J, Multiple hypothesis testing in microarray experiments. Statistical Science. 2003;18(1):71–103. doi: 10.1214/ss/1056397487
-
(2003)
Statistical Science
, vol.18
, Issue.1
, pp. 71-103
-
-
Dudoit, S.1
Schaffer, J.2
Boldrick, J.3
-
21
-
-
0002532939
-
On the “Probable Error” of a Coefficient of Correlation Deduced from a Small Sample
-
Fisher RA, On the “Probable Error” of a Coefficient of Correlation Deduced from a Small Sample. Metron. 1921;1:3–32. Available from: http://digital.library.adelaide.edu.au/dspace/handle/2440/15169.
-
(1921)
Metron
, vol.1
, pp. 3-32
-
-
Fisher, R.A.1
-
23
-
-
79958135926
-
Molecular signatures database (MSigDB) 3.0
-
Liberzon A, Subramanian A, Pinchback R, Thorvaldsdóttir H, Tamayo P, Mesirov JP, Molecular signatures database (MSigDB) 3.0. Bioinformatics (Oxford, England). 2011 Jun;27(12):1739–40. Available from: http://bioinformatics.oxfordjournals.org/content/27/12/1739.short. doi: 10.1093/bioinformatics/btr260
-
(2011)
Bioinformatics (Oxford, England)
, vol.27
, Issue.12
, pp. 1739-1740
-
-
Liberzon, A.1
Subramanian, A.2
Pinchback, R.3
Thorvaldsdóttir, H.4
Tamayo, P.5
Mesirov, J.P.6
-
24
-
-
67649967623
-
Choosing an optimal method to combine P-values
-
Won S, Morris N, Lu Q, Elston RC, Choosing an optimal method to combine P-values. Statistics in medicine. 2009 May;28(11):1537–53. Available from: http://www.pubmedcentral.nih.gov/articlerender.fcgi?artid=2771157\&tool=pmcentrez\&rendertype=abstract doi: 10.1002/sim.3569 19266501.
-
(2009)
Statistics in medicine
, vol.28
, Issue.11
, pp. 1537-1553
-
-
Won, S.1
Morris, N.2
Lu, Q.3
Elston, R.C.4
-
25
-
-
84862908644
-
Mutant p53 disrupts mammary tissue architecture via the mevalonate pathway
-
Freed-Pastor WA, Mizuno H, Zhao X, Langerød A, Moon SH, Rodriguez-Barrueco R, et al. Mutant p53 disrupts mammary tissue architecture via the mevalonate pathway. Cell. 2012 Jan;148(1–2):244–58. Available from: http://www.cell.com/fulltext/S0092-8674(11)01569-8. doi: 10.1016/j.cell.2011.12.017 22265415
-
(2012)
Cell
, vol.148
, Issue.1-2
, pp. 244-258
-
-
Freed-Pastor, W.A.1
Mizuno, H.2
Zhao, X.3
Langerød, A.4
Moon, S.H.5
Rodriguez-Barrueco, R.6
-
26
-
-
77956989082
-
Dysregulation of the mevalonate pathway promotes transformation
-
Clendening JW, Pandyra A, Boutros PC, El Ghamrasni S, Khosravi F, Trentin GA, et al. Dysregulation of the mevalonate pathway promotes transformation. Proceedings of the National Academy of Sciences of the United States of America. 2010 Aug;107(34):15051–6. Available from: http://www.pnas.org/content/107/34/15051.long. doi: 10.1073/pnas.0910258107 20696928
-
(2010)
Proceedings of the National Academy of Sciences of the United States of America
, vol.107
, Issue.34
, pp. 15051-15056
-
-
Clendening, J.W.1
Pandyra, A.2
Boutros, P.C.3
El Ghamrasni, S.4
Khosravi, F.5
Trentin, G.A.6
-
27
-
-
80051923932
-
Functional genomics reveal that the serine synthesis pathway is essential in breast cancer
-
Possemato R, Marks KM, Shaul YD, Pacold ME, Kim D, Birsoy K, et al. Functional genomics reveal that the serine synthesis pathway is essential in breast cancer. Nature. 2011 Aug;476(7360):346–50. Available from: http://dx.doi.org/10.1038/nature10350. doi: 10.1038/nature10350 21760589
-
(2011)
Nature
, vol.476
, Issue.7360
, pp. 346-350
-
-
Possemato, R.1
Marks, K.M.2
Shaul, Y.D.3
Pacold, M.E.4
Kim, D.5
Birsoy, K.6
-
28
-
-
39549084702
-
Overexpression of phosphoserine aminotransferase PSAT1 stimulates cell growth and increases chemoresistance of colon cancer cells
-
Vié N, Copois V, Bascoul-Mollevi C, Denis V, Bec N, Robert B, et al. Overexpression of phosphoserine aminotransferase PSAT1 stimulates cell growth and increases chemoresistance of colon cancer cells. Molecular cancer. 2008 Jan;7(1):14. Available from: http://www.molecular-cancer.com/content/7/1/14. doi: 10.1186/1476-4598-7-14 18221502
-
(2008)
Molecular cancer
, vol.7
, Issue.1
, pp. 14
-
-
Vié, N.1
Copois, V.2
Bascoul-Mollevi, C.3
Denis, V.4
Bec, N.5
Robert, B.6
-
29
-
-
77951903067
-
Arginine deprivation and argininosuccinate synthetase expression in the treatment of cancer
-
Delage B, Fennell DA, Nicholson L, McNeish I, Lemoine NR, Crook T, et al. Arginine deprivation and argininosuccinate synthetase expression in the treatment of cancer. International journal of cancer Journal international du cancer. 2010 Jun;126(12):2762–72. Available from: http://www.ncbi.nlm.nih.gov/pubmed/20104527. 20104527
-
(2010)
International journal of cancer Journal international du cancer
, vol.126
, Issue.12
, pp. 2762-2772
-
-
Delage, B.1
Fennell, D.A.2
Nicholson, L.3
McNeish, I.4
Lemoine, N.R.5
Crook, T.6
-
30
-
-
84904421955
-
Arginine Starvation Impairs Mitochondrial Respiratory Function in ASS1-Deficient Breast Cancer Cells
-
Qiu F, Chen YR, Liu X, Chu CY, Shen LJ, Xu J, et al. Arginine Starvation Impairs Mitochondrial Respiratory Function in ASS1-Deficient Breast Cancer Cells. Science Signaling. 2014 Apr;7(319):ra31–ra31. Available from: http://stke.sciencemag.org/cgi/content/abstract/7/319/ra31. doi: 10.1126/scisignal.2004761 24692592
-
(2014)
Science Signaling
, vol.7
, Issue.319
, pp. ra31-ra31
-
-
Qiu, F.1
Chen, Y.R.2
Liu, X.3
Chu, C.Y.4
Shen, L.J.5
Xu, J.6
-
31
-
-
84879493961
-
Frequent inactivation of cysteine dioxygenase type 1 contributes to survival of breast cancer cells and resistance to anthracyclines
-
Jeschke J, O’Hagan HM, Zhang W, Vatapalli R, Calmon MF, Danilova L, et al. Frequent inactivation of cysteine dioxygenase type 1 contributes to survival of breast cancer cells and resistance to anthracyclines. Clinical cancer research: an official journal of the American Association for Cancer Research. 2013 Jun;19(12):3201–11. Available from: http://www.ncbi.nlm.nih.gov/pubmed/23630167. doi: 10.1158/1078-0432.CCR-12-3751
-
(2013)
Clinical cancer research: an official journal of the American Association for Cancer Research
, vol.19
, Issue.12
, pp. 3201-3211
-
-
Jeschke, J.1
O’Hagan, H.M.2
Zhang, W.3
Vatapalli, R.4
Calmon, M.F.5
Danilova, L.6
-
32
-
-
84860491505
-
Metabolomics of human breast cancer: new approaches for tumor typing and biomarker discovery
-
Denkert C, Bucher E, Hilvo M, Salek R, Orešič M, Griffin J, et al. Metabolomics of human breast cancer: new approaches for tumor typing and biomarker discovery. Genome medicine. 2012 Jan;4(4):37. Available from: http://genomemedicine.com/content/4/4/37. doi: 10.1186/gm336 22546809
-
(2012)
Genome medicine
, vol.4
, Issue.4
, pp. 37
-
-
Denkert, C.1
Bucher, E.2
Hilvo, M.3
Salek, R.4
Orešič, M.5
Griffin, J.6
-
33
-
-
73149109062
-
Monoacylglycerol lipase regulates a fatty acid network that promotes cancer pathogenesis
-
Nomura DK, Long JZ, Niessen S, Hoover HS, Ng SW, Cravatt BF, Monoacylglycerol lipase regulates a fatty acid network that promotes cancer pathogenesis. Cell. 2010 Jan;140(1):49–61. Available from: http://www.sciencedirect.com/science/article/pii/S0092867409014391. doi: 10.1016/j.cell.2009.11.027 20079333
-
(2010)
Cell
, vol.140
, Issue.1
, pp. 49-61
-
-
Nomura, D.K.1
Long, J.Z.2
Niessen, S.3
Hoover, H.S.4
Ng, S.W.5
Cravatt, B.F.6
-
34
-
-
78651332286
-
Pathway Commons, a web resource for biological pathway data
-
Cerami EG, Gross BE, Demir E, Rodchenkov I, Babur O, Anwar N, et al. Pathway Commons, a web resource for biological pathway data. Nucleic acids research. 2011 Jan;39(Database issue):D685–90. Available from: http://nar.oxfordjournals.org/content/39/suppl\_1/D685.short. doi: 10.1093/nar/gkq1039 21071392
-
(2011)
Nucleic acids research
, vol.39
, Issue.Database issue
, pp. 90-685
-
-
Cerami, E.G.1
Gross, B.E.2
Demir, E.3
Rodchenkov, I.4
Babur, O.5
Anwar, N.6
-
35
-
-
84891354802
-
Pattern search in BioPAX models
-
Babur O, Aksoy BA, Rodchenkov I, Sümer SO, Sander C, Demir E, Pattern search in BioPAX models. Bioinformatics (Oxford, England). 2014 Jan;30(1):139–40. Available from: http://bioinformatics.oxfordjournals.org/content/30/1/139.full. doi: 10.1093/bioinformatics/btt539
-
(2014)
Bioinformatics (Oxford, England)
, vol.30
, Issue.1
, pp. 139-140
-
-
Babur, O.1
Aksoy, B.A.2
Rodchenkov, I.3
Sümer, S.O.4
Sander, C.5
Demir, E.6
-
36
-
-
84875929563
-
The expression profile of ATP-binding cassette transporter genes in breast carcinoma
-
Hlaváč V, Brynychová V, Václavíková R, Ehrlichová M, Vrána D, Pecha V, et al. The expression profile of ATP-binding cassette transporter genes in breast carcinoma. Pharmacogenomics. 2013 Apr;14(5):515–29. Available from: http://www.ncbi.nlm.nih.gov/pubmed/23556449. doi: 10.2217/pgs.13.26 23556449
-
(2013)
Pharmacogenomics
, vol.14
, Issue.5
, pp. 515-529
-
-
Hlaváč, V.1
Brynychová, V.2
Václavíková, R.3
Ehrlichová, M.4
Vrána, D.5
Pecha, V.6
-
37
-
-
84896735766
-
Voom: precision weights unlock linear model analysis tools for RNA-seq read counts
-
Law CW, Chen Y, Shi W, Smyth GK, Voom: precision weights unlock linear model analysis tools for RNA-seq read counts. Genome biology. 2014 Feb;15(2):R29. Available from: http://genomebiology.com/2014/15/2/R29. doi: 10.1186/gb-2014-15-2-r29 24485249
-
(2014)
Genome biology
, vol.15
, Issue.2
, pp. R29
-
-
Law, C.W.1
Chen, Y.2
Shi, W.3
Smyth, G.K.4
-
38
-
-
84877899680
-
Procollagen lysyl hydroxylase 2 is essential for hypoxia-induced breast cancer metastasis
-
Gilkes DM, Bajpai S, Wong CC, Chaturvedi P, Hubbi ME, Wirtz D, et al. Procollagen lysyl hydroxylase 2 is essential for hypoxia-induced breast cancer metastasis. Molecular cancer research: MCR. 2013 May;11(5):456–66. Available from: http://www.ncbi.nlm.nih.gov/pubmed/23378577. doi: 10.1158/1541-7786.MCR-12-0629 23378577
-
(2013)
Molecular cancer research: MCR
, vol.11
, Issue.5
, pp. 456-466
-
-
Gilkes, D.M.1
Bajpai, S.2
Wong, C.C.3
Chaturvedi, P.4
Hubbi, M.E.5
Wirtz, D.6
-
39
-
-
84863806531
-
Metabolic flux increases glycoprotein sialylation: implications for cell adhesion and cancer metastasis
-
Almaraz RT, Tian Y, Bhattarcharya R, Tan E, Chen SH, Dallas MR, et al. Metabolic flux increases glycoprotein sialylation: implications for cell adhesion and cancer metastasis. Molecular & cellular proteomics: MCP. 2012 Jul;11(7):M112.017558. Available from: http://www.pubmedcentral.nih.gov/articlerender.fcgi?artid=3394959\&tool=pmcentrez\&rendertype=abstract. doi: 10.1074/mcp.M112.017558
-
(2012)
Molecular & cellular proteomics: MCP
, vol.11
, Issue.7
-
-
Almaraz, R.T.1
Tian, Y.2
Bhattarcharya, R.3
Tan, E.4
Chen, S.H.5
Dallas, M.R.6
-
40
-
-
77951944593
-
Regulatory impact factors: unraveling the transcriptional regulation of complex traits from expression data
-
Reverter A, Hudson NJ, Nagaraj SH, Pérez-Enciso M, Dalrymple BP, Regulatory impact factors: unraveling the transcriptional regulation of complex traits from expression data. Bioinformatics (Oxford, England). 2010 Apr;26(7):896–904. Available from: http://bioinformatics.oxfordjournals.org/content/26/7/896.html. doi: 10.1093/bioinformatics/btq051
-
(2010)
Bioinformatics (Oxford, England)
, vol.26
, Issue.7
, pp. 896-904
-
-
Reverter, A.1
Hudson, N.J.2
Nagaraj, S.H.3
Pérez-Enciso, M.4
Dalrymple, B.P.5
-
42
-
-
84868015193
-
Cyclooxygenase-2 up-regulates CCR7 expression via AKT-mediated phosphorylation and activation of Sp1 in breast cancer cells
-
Chuang CW, Pan MR, Hou MF, Hung WC, Cyclooxygenase-2 up-regulates CCR7 expression via AKT-mediated phosphorylation and activation of Sp1 in breast cancer cells. Journal of cellular physiology. 2013 Feb;228(2):341–8. Available from: http://www.ncbi.nlm.nih.gov/pubmed/22718198. doi: 10.1002/jcp.24136 22718198
-
(2013)
Journal of cellular physiology
, vol.228
, Issue.2
, pp. 341-348
-
-
Chuang, C.W.1
Pan, M.R.2
Hou, M.F.3
Hung, W.C.4
-
43
-
-
33744948986
-
NFAT induces breast cancer cell invasion by promoting the induction of cyclooxygenase-2
-
Yiu GK, Toker A, NFAT induces breast cancer cell invasion by promoting the induction of cyclooxygenase-2. The Journal of biological chemistry. 2006 May;281(18):12210–7. Available from: http://www.jbc.org/content/281/18/12210.short. doi: 10.1074/jbc.M600184200 16505480
-
(2006)
The Journal of biological chemistry
, vol.281
, Issue.18
, pp. 12210-12217
-
-
Yiu, G.K.1
Toker, A.2
-
44
-
-
33846951523
-
Estrogen-related receptor alpha1 transcriptional activities are regulated in part via the ErbB2/HER2 signaling pathway
-
Ariazi EA, Kraus RJ, Farrell ML, Jordan VC, Mertz JE, Estrogen-related receptor alpha1 transcriptional activities are regulated in part via the ErbB2/HER2 signaling pathway. Molecular cancer research: MCR. 2007 Jan;5(1):71–85. Available from: http://www.ncbi.nlm.nih.gov/pubmed/17259347. doi: 10.1158/1541-7786.MCR-06-0227 17259347
-
(2007)
Molecular cancer research: MCR
, vol.5
, Issue.1
, pp. 71-85
-
-
Ariazi, E.A.1
Kraus, R.J.2
Farrell, M.L.3
Jordan, V.C.4
Mertz, J.E.5
-
45
-
-
0037112441
-
Estrogen-related receptor alpha and estrogen-related receptor gamma associate with unfavorable and favorable biomarkers, respectively, in human breast cancer
-
Ariazi EA, Clark GM, Mertz JE, Estrogen-related receptor alpha and estrogen-related receptor gamma associate with unfavorable and favorable biomarkers, respectively, in human breast cancer. Cancer research. 2002 Nov;62(22):6510–8. Available from: http://www.ncbi.nlm.nih.gov/pubmed/12438245. 12438245
-
(2002)
Cancer research
, vol.62
, Issue.22
, pp. 6510-6518
-
-
Ariazi, E.A.1
Clark, G.M.2
Mertz, J.E.3
-
46
-
-
38649091384
-
HNF4 alpha orchestrates a set of 14 genes to down-regulate cell proliferation in kidney cells
-
Grigo K, Wirsing A, Lucas B, Klein-Hitpass L, Ryffel GU, HNF4 alpha orchestrates a set of 14 genes to down-regulate cell proliferation in kidney cells. Biological chemistry. 2008 Feb;389(2):179–87. Available from: http://www.ncbi.nlm.nih.gov/pubmed/18163890. doi: 10.1515/BC.2008.011 18163890
-
(2008)
Biological chemistry
, vol.389
, Issue.2
, pp. 179-187
-
-
Grigo, K.1
Wirsing, A.2
Lucas, B.3
Klein-Hitpass, L.4
Ryffel, G.U.5
-
47
-
-
0029937978
-
Human renal cell carcinogenesis is accompanied by a coordinate loss of the tissue specific transcription factors HNF4α and HNF1α
-
Sel S, Ebert T, Ryffel GU, Drewes T, Human renal cell carcinogenesis is accompanied by a coordinate loss of the tissue specific transcription factors HNF4α and HNF1α. Cancer Letters. 1996 Mar;101(2):205–210. Available from: http://www.sciencedirect.com/science/article/pii/0304383596041365. doi: 10.1016/0304-3835(96)04136-5 8620471
-
(1996)
Cancer Letters
, vol.101
, Issue.2
, pp. 205-210
-
-
Sel, S.1
Ebert, T.2
Ryffel, G.U.3
Drewes, T.4
-
48
-
-
27144512719
-
HNF4alpha reduces proliferation of kidney cells and affects genes deregulated in renal cell carcinoma
-
Lucas B, Grigo K, Erdmann S, Lausen J, Klein-Hitpass L, Ryffel GU, HNF4alpha reduces proliferation of kidney cells and affects genes deregulated in renal cell carcinoma. Oncogene. 2005 Sep;24(42):6418–31. Available from: http://dx.doi.org/10.1038/sj.onc.1208794. 16007190
-
(2005)
Oncogene
, vol.24
, Issue.42
, pp. 6418-6431
-
-
Lucas, B.1
Grigo, K.2
Erdmann, S.3
Lausen, J.4
Klein-Hitpass, L.5
Ryffel, G.U.6
-
49
-
-
48949115115
-
Cellular reactions to gene dosage imbalance: genomic, transcriptomic and proteomic effects
-
Veitia RA, Bottani S, Birchler JA, Cellular reactions to gene dosage imbalance: genomic, transcriptomic and proteomic effects. Trends in genetics: TIG. 2008 Aug;24(8):390–7. Available from: http://www.cell.com/article/S0168952508001741/fulltext. doi: 10.1016/j.tig.2008.05.005 18585818
-
(2008)
Trends in genetics: TIG
, vol.24
, Issue.8
, pp. 390-397
-
-
Veitia, R.A.1
Bottani, S.2
Birchler, J.A.3
-
50
-
-
0026802334
-
Metabolic control analysis: a survey of its theoretical and experimental development
-
Fell DA, Metabolic control analysis: a survey of its theoretical and experimental development. The Biochemical journal. 1992 Sep;286 Pt 2:313–30. Available from: http://www.pubmedcentral.nih.gov/articlerender.fcgi?artid=1132899\&tool=pmcentrez\&rendertype=abstract. 1530563
-
(1992)
The Biochemical journal
, vol.286
, pp. 313-330
-
-
Fell, D.A.1
-
51
-
-
84889643157
-
Transcriptional regulation is insufficient to explain substrate-induced flux changes in Bacillus subtilis
-
Chubukov V, Uhr M, Le Chat L, Kleijn RJ, Jules M, Link H, et al. Transcriptional regulation is insufficient to explain substrate-induced flux changes in Bacillus subtilis. Molecular systems biology. 2013 Jan;9:709. Available from: http://www.ncbi.nlm.nih.gov/pubmed/24281055. doi: 10.1038/msb.2013.66 24281055
-
(2013)
Molecular systems biology
, vol.9
, pp. 709
-
-
Chubukov, V.1
Uhr, M.2
Le Chat, L.3
Kleijn, R.J.4
Jules, M.5
Link, H.6
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