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Volumn 22, Issue 2, 2015, Pages 131-144

HES5 silencing is an early and recurrent change in prostate tumourigenesis

Author keywords

AR; Epigenetics; ERG; HES5; HES6; Methylation; NOTCH; Prostate cancer

Indexed keywords

TRANSCRIPTION FACTOR; TRANSCRIPTION FACTOR HES 1; TRANSCRIPTION FACTOR HES 5; TRANSCRIPTION FACTOR HES 6; UNCLASSIFIED DRUG; BASIC HELIX LOOP HELIX TRANSCRIPTION FACTOR; ERG PROTEIN, HUMAN; HES5 PROTEIN, HUMAN; REPRESSOR PROTEIN; TRANSACTIVATOR PROTEIN;

EID: 84929310043     PISSN: 13510088     EISSN: 14796821     Source Type: Journal    
DOI: 10.1530/ERC-14-0454     Document Type: Article
Times cited : (14)

References (78)
  • 1
    • 84901852284 scopus 로고    scopus 로고
    • Differentiation imbalance in single oesophageal progenitor cells causes clonal immortalization and field change
    • Alcolea MP, Greulich P, Wabik A, Frede J, Simons BD & Jones PH 2014 Differentiation imbalance in single oesophageal progenitor cells causes clonal immortalization and field change. Nature Cell Biology 16 615-622. (doi:10.1038/ncb2963)
    • (2014) Nature Cell Biology , vol.16 , pp. 615-622
    • Alcolea, M.P.1    Greulich, P.2    Wabik, A.3    Frede, J.4    Simons, B.D.5    Jones, P.H.6
  • 3
    • 84897548625 scopus 로고    scopus 로고
    • Minfi: A flexible and comprehensive Bioconductor package for the analysis of Infinium DNA methylation microarrays
    • Aryee MJ, Jaffe AE, Corrada-Bravo H, Ladd-Acosta C, Feinberg AP, Hansen KD & Irizarry RA 2014 Minfi: a flexible and comprehensive Bioconductor package for the analysis of Infinium DNA methylation microarrays. Bioinformatics 30 1363-1369. (doi:10.1093/bioinformatics/btu049)
    • (2014) Bioinformatics , vol.30 , pp. 1363-1369
    • Aryee, M.J.1    Jaffe, A.E.2    Corrada-Bravo, H.3    Ladd-Acosta, C.4    Feinberg, A.P.5    Hansen, K.D.6    Irizarry, R.A.7
  • 6
    • 0033913972 scopus 로고    scopus 로고
    • The bHLH gene Hes6, an inhibitor of Hes1, promotes neuronal differentiation
    • Bae S, Bessho Y, Hojo M & Kageyama R 2000 The bHLH gene Hes6, an inhibitor of Hes1, promotes neuronal differentiation. Development 127 2933-2943.
    • (2000) Development , vol.127 , pp. 2933-2943
    • Bae, S.1    Bessho, Y.2    Hojo, M.3    Kageyama, R.4
  • 8
    • 35648948853 scopus 로고    scopus 로고
    • TMPRSS2-ERG fusion heterogeneity in multifocal prostate cancer: Clinical and biologic implications
    • Barry M, Perner S, Demichelis F & Rubin MA 2007 TMPRSS2-ERG fusion heterogeneity in multifocal prostate cancer: clinical and biologic implications. Urology 70 630-633. (doi:10.1016/j.urology.2007.08.032)
    • (2007) Urology , vol.70 , pp. 630-633
    • Barry, M.1    Perner, S.2    Demichelis, F.3    Rubin, M.A.4
  • 11
    • 34547931715 scopus 로고    scopus 로고
    • Cell- and gene-specific regulation of primary target genes by the androgen receptor
    • Bolton EC, So AY, Chaivorapol C, Haqq CM, Li H & Yamamoto KR 2007 Cell- and gene-specific regulation of primary target genes by the androgen receptor. Genes and Development 21 2005-2017. (doi:10.1101/gad.1564207)
    • (2007) Genes and Development , vol.21 , pp. 2005-2017
    • Bolton, E.C.1    So, A.Y.2    Chaivorapol, C.3    Haqq, C.M.4    Li, H.5    Yamamoto, K.R.6
  • 12
    • 0032212356 scopus 로고    scopus 로고
    • Independent origin of multiple foci of prostatic intraepithelial neoplasia: Comparison with matched foci of prostate carcinoma
    • Bostwick DG, Shan A, Qian J, Darson M, Maihle NJ, Jenkins RB & Cheng L 1998 Independent origin of multiple foci of prostatic intraepithelial neoplasia: comparison with matched foci of prostate carcinoma. Cancer 83 1995-2002. (doi:10.1002/(SICI)1097-0142(19981101)83:9〈1995::AID-CNCR16〉3.0.CO;2-2)
    • (1998) Cancer , vol.83 , pp. 1995-2002
    • Bostwick, D.G.1    Shan, A.2    Qian, J.3    Darson, M.4    Maihle, N.J.5    Jenkins, R.B.6    Cheng, L.7
  • 13
    • 84904561115 scopus 로고    scopus 로고
    • Sexually transmitted infections and prostate cancer risk: A systematic review and meta-analysis
    • Caini S, Gandini S, Dudas M, Bremer V, Severi E & Gherasim A 2014 Sexually transmitted infections and prostate cancer risk: a systematic review and meta-analysis. Cancer Epidemiology 38 329-338. (doi:10.1016/j.canep.2014.06.002)
    • (2014) Cancer Epidemiology , vol.38 , pp. 329-338
    • Caini, S.1    Gandini, S.2    Dudas, M.3    Bremer, V.4    Severi, E.5    Gherasim, A.6
  • 15
    • 84863922124 scopus 로고    scopus 로고
    • Comprehensive molecular characterization of human colon and rectal cancer
    • Cancer Genome Atlas Network 2012 Comprehensive molecular characterization of human colon and rectal cancer. Nature 487 330-337. (doi:10.1038/nature11252)
    • (2012) Nature , vol.487 , pp. 330-337
    • Cancer Genome Atlas Network1
  • 16
    • 79959838081 scopus 로고    scopus 로고
    • Integrated genomic analyses of ovarian carcinoma
    • Cancer Genome Atlas Research Network 2011 Integrated genomic analyses of ovarian carcinoma. Nature 474 609-615. (doi:10.1038/nature10166)
    • (2011) Nature , vol.474 , pp. 609-615
    • Cancer Genome Atlas Research Network1
  • 19
    • 34547871639 scopus 로고    scopus 로고
    • GEOquery: A bridge between the Gene Expression Omnibus (GEO) and BioConductor
    • Davis S & Meltzer PS 2007 GEOquery: a bridge between the Gene Expression Omnibus (GEO) and BioConductor. Bioinformatics 23 1846-1847. (doi:10.1093/bioinformatics/btm254)
    • (2007) Bioinformatics , vol.23 , pp. 1846-1847
    • Davis, S.1    Meltzer, P.S.2
  • 20
    • 34548561818 scopus 로고    scopus 로고
    • beadarray: R classes and methods for Illumina bead-based data
    • Dunning MJ, Smith ML, Ritchie ME & Tavare S 2007 beadarray: R classes and methods for Illumina bead-based data. Bioinformatics 23 2183-2184. (doi:10.1093/bioinformatics/btm311)
    • (2007) Bioinformatics , vol.23 , pp. 2183-2184
    • Dunning, M.J.1    Smith, M.L.2    Ritchie, M.E.3    Tavare, S.4
  • 22
    • 70449526643 scopus 로고    scopus 로고
    • Chronic bacterial inflammation induces prostatic intraepithelial neoplasia in mouse prostate
    • Elkahwaji JE, Hauke RJ & Brawner CM 2009 Chronic bacterial inflammation induces prostatic intraepithelial neoplasia in mouse prostate. British Journal of Cancer 101 1740-1748. (doi:10.1038/sj.bjc.6605370)
    • (2009) British Journal of Cancer , vol.101 , pp. 1740-1748
    • Elkahwaji, J.E.1    Hauke, R.J.2    Brawner, C.M.3
  • 23
    • 19344373750 scopus 로고    scopus 로고
    • A novel hes5/hes6 circuitry of negative regulation controls Notch activity during neurogenesis
    • Fior R & Henrique D 2005 A novel hes5/hes6 circuitry of negative regulation controls Notch activity during neurogenesis. Developmental Biology 281 318-333. (doi:10.1016/j.ydbio.2005.03.017)
    • (2005) Developmental Biology , vol.281 , pp. 318-333
    • Fior, R.1    Henrique, D.2
  • 24
    • 26444519930 scopus 로고    scopus 로고
    • Obesity and prostate cancer: A growing problem
    • Freedland SJ 2005 Obesity and prostate cancer: a growing problem. Clinical Cancer Research 11 6763-6766. (doi:10.1158/1078-0432.CCR-05-1305)
    • (2005) Clinical Cancer Research , vol.11 , pp. 6763-6766
    • Freedland, S.J.1
  • 28
    • 10344264425 scopus 로고    scopus 로고
    • Hes genes regulate size, shape and histogenesis of the nervous system by control of the timing of neural stem cell differentiation
    • Hatakeyama J, Bessho Y, Katoh K, Ookawara S, Fujioka M, Guillemot F & Kageyama R 2004 Hes genes regulate size, shape and histogenesis of the nervous system by control of the timing of neural stem cell differentiation. Development 131 5539-5550. (doi:10.1242/dev.01436)
    • (2004) Development , vol.131 , pp. 5539-5550
    • Hatakeyama, J.1    Bessho, Y.2    Katoh, K.3    Ookawara, S.4    Fujioka, M.5    Guillemot, F.6    Kageyama, R.7
  • 29
    • 33644633831 scopus 로고    scopus 로고
    • Hes1 and Hes5 regulate the development of the cranial and spinal nerve systems
    • Hatakeyama J, Sakamoto S & Kageyama R 2006 Hes1 and Hes5 regulate the development of the cranial and spinal nerve systems. Developmental Neuroscience 28 92-101. (doi:10.1159/000090756)
    • (2006) Developmental Neuroscience , vol.28 , pp. 92-101
    • Hatakeyama, J.1    Sakamoto, S.2    Kageyama, R.3
  • 32
    • 45649084367 scopus 로고    scopus 로고
    • HES1 regulates 5-HT1A receptor gene transcription at a functional polymorphism: Essential role in developmental expression
    • Jacobsen KX, Vanderluit JL, Slack RS & Albert PR 2008 HES1 regulates 5-HT1A receptor gene transcription at a functional polymorphism: essential role in developmental expression. Molecular and Cellular Neurosciences 38 349-358. (doi:10.1016/j.mcn.2008.03.007)
    • (2008) Molecular and Cellular Neurosciences , vol.38 , pp. 349-358
    • Jacobsen, K.X.1    Vanderluit, J.L.2    Slack, R.S.3    Albert, P.R.4
  • 33
    • 58149234445 scopus 로고    scopus 로고
    • Genomic androgen receptor-occupied regions with different functions, defined by histone acetylation, coregulators and transcriptional capacity
    • Jia L, Berman BP, Jariwala U, Yan X, Cogan JP, Walters A, Chen T, Buchanan G, Frenkel B & Coetzee GA 2008 Genomic androgen receptor-occupied regions with different functions, defined by histone acetylation, coregulators and transcriptional capacity. PLoS ONE 3 e3645. (doi:10.1371/journal.pone.0003645)
    • (2008) PLoS ONE , vol.3 , pp. e3645
    • Jia, L.1    Berman, B.P.2    Jariwala, U.3    Yan, X.4    Cogan, J.P.5    Walters, A.6    Chen, T.7    Buchanan, G.8    Frenkel, B.9    Coetzee, G.A.10
  • 34
    • 64749108996 scopus 로고    scopus 로고
    • Tumours with PI3K activation are resistant to dietary restriction
    • Kalaany NY & Sabatini DM 2009 Tumours with PI3K activation are resistant to dietary restriction. Nature 458 725-731. (doi:10.1038/nature07782)
    • (2009) Nature , vol.458 , pp. 725-731
    • Kalaany, N.Y.1    Sabatini, D.M.2
  • 37
    • 79957868920 scopus 로고    scopus 로고
    • Bismark: A flexible aligner and methylation caller for Bisulfite-Seq applications
    • Krueger F & Andrews SR 2011 Bismark: a flexible aligner and methylation caller for Bisulfite-Seq applications. Bioinformatics 27 1571-1572. (doi:10.1093/bioinformatics/btr167)
    • (2011) Bioinformatics , vol.27 , pp. 1571-1572
    • Krueger, F.1    Andrews, S.R.2
  • 38
    • 84893434932 scopus 로고    scopus 로고
    • Prostatic inflammation enhances basal-to-luminal differentiation and accelerates initiation of prostate cancer with a basal cell origin
    • Kwon OJ, Zhang L, Ittmann MM & Xin L 2014 Prostatic inflammation enhances basal-to-luminal differentiation and accelerates initiation of prostate cancer with a basal cell origin. PNAS 111 E592-E600. (doi:10.1073/pnas.1318157111)
    • (2014) PNAS , vol.111 , pp. E592-E600
    • Kwon, O.J.1    Zhang, L.2    Ittmann, M.M.3    Xin, L.4
  • 39
    • 0028152397 scopus 로고
    • Cytidine methylation of regulatory sequences near the pi-class glutathione S-transferase gene accompanies human prostatic carcinogenesis
    • Lee WH, Morton RA, Epstein JI, Brooks JD, Campbell PA, Bova GS, Hsieh WS, Isaacs WB & Nelson WG 1994 Cytidine methylation of regulatory sequences near the pi-class glutathione S-transferase gene accompanies human prostatic carcinogenesis. PNAS 91 11733-11737. (doi:10.1073/pnas.91.24.11733)
    • (1994) PNAS , vol.91 , pp. 11733-11737
    • Lee, W.H.1    Morton, R.A.2    Epstein, J.I.3    Brooks, J.D.4    Campbell, P.A.5    Bova, G.S.6    Hsieh, W.S.7    Isaacs, W.B.8    Nelson, W.G.9
  • 40
    • 68749084845 scopus 로고    scopus 로고
    • Integrated expression profiling and ChIP-seq analyses of the growth inhibition response program of the androgen receptor
    • Lin B, Wang J, Hong X, Yan X, Hwang D, Cho JH, Yi D, Utleg AG, Fang X, Schones DE et al. 2009 Integrated expression profiling and ChIP-seq analyses of the growth inhibition response program of the androgen receptor. PLoS ONE 4 e6589. (doi:10.1371/journal.pone.0006589)
    • (2009) PLoS ONE , vol.4 , pp. e6589
    • Lin, B.1    Wang, J.2    Hong, X.3    Yan, X.4    Hwang, D.5    Cho, J.H.6    Yi, D.7    Utleg, A.G.8    Fang, X.9    Schones, D.E.10
  • 42
    • 80555153990 scopus 로고    scopus 로고
    • BioTapestry: A tool to visualize the dynamic properties of gene regulatory networks
    • Longabaugh WJ 2012 BioTapestry: a tool to visualize the dynamic properties of gene regulatory networks. Methods in Molecular Biology 786 359-394. (doi:10.1007/978-1-61779-292-2-21)
    • (2012) Methods in Molecular Biology , vol.786 , pp. 359-394
    • Longabaugh, W.J.1
  • 50
    • 62549083590 scopus 로고    scopus 로고
    • Negative autoregulation linearizes the dose-response and suppresses the heterogeneity of gene expression
    • Nevozhay D, Adams RM, Murphy KF, Josic K & Balazsi G 2009 Negative autoregulation linearizes the dose-response and suppresses the heterogeneity of gene expression. PNAS 106 5123-5128. (doi:10.1073/pnas.0809901106)
    • (2009) PNAS , vol.106 , pp. 5123-5128
    • Nevozhay, D.1    Adams, R.M.2    Murphy, K.F.3    Josic, K.4    Balazsi, G.5
  • 54
    • 42249109209 scopus 로고    scopus 로고
    • BioSAVE: Display of scored annotation within a sequence context
    • Pollock RF & Adryan B 2008 BioSAVE: display of scored annotation within a sequence context. BMC Bioinformatics 9 157. (doi:10.1186/1471-2105-9-157)
    • (2008) BMC Bioinformatics , vol.9 , pp. 157
    • Pollock, R.F.1    Adryan, B.2
  • 57
    • 0036428761 scopus 로고    scopus 로고
    • Negative autoregulation speeds the response times of transcription networks
    • Rosenfeld N, Elowitz MB & Alon U 2002 Negative autoregulation speeds the response times of transcription networks. Journal of Molecular Biology 323 785-793. (doi:10.1016/S0022-2836(02)00994-4)
    • (2002) Journal of Molecular Biology , vol.323 , pp. 785-793
    • Rosenfeld, N.1    Elowitz, M.B.2    Alon, U.3
  • 58
    • 11144307314 scopus 로고    scopus 로고
    • NGF controls dendrite development in hippocampal neurons by binding to p75NTR and modulating the cellular targets of Notch
    • Salama-Cohen P, Arevalo MA, Meier J, Grantyn R & Rodriguez-Tebar A 2005 NGF controls dendrite development in hippocampal neurons by binding to p75NTR and modulating the cellular targets of Notch. Molecular Biology of the Cell 16 339-347. (doi:10.1091/mbc.E04-05-0438)
    • (2005) Molecular Biology of the Cell , vol.16 , pp. 339-347
    • Salama-Cohen, P.1    Arevalo, M.A.2    Meier, J.3    Grantyn, R.4    Rodriguez-Tebar, A.5
  • 59
    • 84879384549 scopus 로고    scopus 로고
    • Fbw7 repression by hes5 creates a feedback loop that modulates Notch-mediated intestinal and neural stem cell fate decisions
    • Sancho R, Blake SM, Tendeng C, Clurman BE, Lewis J & Behrens A 2013 Fbw7 repression by hes5 creates a feedback loop that modulates Notch-mediated intestinal and neural stem cell fate decisions. PLoS Biology 11 e1001586. (doi:10.1371/journal.pbio.1001586)
    • (2013) PLoS Biology , vol.11 , pp. e1001586
    • Sancho, R.1    Blake, S.M.2    Tendeng, C.3    Clurman, B.E.4    Lewis, J.5    Behrens, A.6
  • 61
    • 0036578795 scopus 로고    scopus 로고
    • Network motifs in the transcriptional regulation network of Escherichia coli
    • Shen-Orr SS, Milo R, Mangan S & Alon U 2002 Network motifs in the transcriptional regulation network of Escherichia coli. Nature Genetics 31 64-68. (doi:10.1038/ng881)
    • (2002) Nature Genetics , vol.31 , pp. 64-68
    • Shen-Orr, S.S.1    Milo, R.2    Mangan, S.3    Alon, U.4
  • 63
    • 84861916932 scopus 로고    scopus 로고
    • Bisulfite sequencing of chromatin immunoprecipitated DNA (BisChIP-seq) directly informs methylation status of histone-modified DNA
    • Statham AL, Robinson MD, Song JZ, Coolen MW, Stirzaker C & Clark SJ 2012 Bisulfite sequencing of chromatin immunoprecipitated DNA (BisChIP-seq) directly informs methylation status of histone-modified DNA. Genome Research 22 1120-1127. (doi:10.1101/gr.132076.111)
    • (2012) Genome Research , vol.22 , pp. 1120-1127
    • Statham, A.L.1    Robinson, M.D.2    Song, J.Z.3    Coolen, M.W.4    Stirzaker, C.5    Clark, S.J.6
  • 64
    • 34347324035 scopus 로고    scopus 로고
    • Identification of novel androgen response genes in prostate cancer cells by coupling chromatin immunoprecipitation and genomic microarray analysis
    • Takayama K, Kaneshiro K, Tsutsumi S, Horie-Inoue K, Ikeda K, Urano T, Ijichi N, Ouchi Y, Shirahige K, Aburatani H et al. 2007 Identification of novel androgen response genes in prostate cancer cells by coupling chromatin immunoprecipitation and genomic microarray analysis. Oncogene 26 4453-4463. (doi:10.1038/sj.onc.1210229)
    • (2007) Oncogene , vol.26 , pp. 4453-4463
    • Takayama, K.1    Kaneshiro, K.2    Tsutsumi, S.3    Horie-Inoue, K.4    Ikeda, K.5    Urano, T.6    Ijichi, N.7    Ouchi, Y.8    Shirahige, K.9    Aburatani, H.10
  • 66
    • 79953029369 scopus 로고    scopus 로고
    • Cooperative functions of Hes/Hey genes in auditory hair cell and supporting cell development
    • Tateya T, Imayoshi I, Tateya I, Ito J & Kageyama R 2011 Cooperative functions of Hes/Hey genes in auditory hair cell and supporting cell development. Developmental Biology 352 329-340. (doi:10.1016/j.ydbio.2011.01.038)
    • (2011) Developmental Biology , vol.352 , pp. 329-340
    • Tateya, T.1    Imayoshi, I.2    Tateya, I.3    Ito, J.4    Kageyama, R.5
  • 68
    • 52749097035 scopus 로고    scopus 로고
    • Using RSAT to scan genome sequences for transcription factor binding sites and cis-regulatory modules
    • Turatsinze JV, Thomas-Chollier M, Defrance M & van Helden J 2008 Using RSAT to scan genome sequences for transcription factor binding sites and cis-regulatory modules. Nature Protocols 3 1578-1588. (doi:10.1038/nprot.2008.97)
    • (2008) Nature Protocols , vol.3 , pp. 1578-1588
    • Turatsinze, J.V.1    Thomas-Chollier, M.2    Defrance, M.3    Van Helden, J.4
  • 71
    • 67650758019 scopus 로고    scopus 로고
    • Androgen receptor regulates a distinct transcription program in androgen-independent prostate cancer
    • Wang Q, Li W, Zhang Y, Yuan X, Xu K, Yu J, Chen Z, Beroukhim R, Wang H, Lupien M et al. 2009 Androgen receptor regulates a distinct transcription program in androgen-independent prostate cancer. Cell 138 245-256. (doi:10.1016/j.cell.2009.04.056)
    • (2009) Cell , vol.138 , pp. 245-256
    • Wang, Q.1    Li, W.2    Zhang, Y.3    Yuan, X.4    Xu, K.5    Yu, J.6    Chen, Z.7    Beroukhim, R.8    Wang, H.9    Lupien, M.10
  • 72
    • 84871618872 scopus 로고    scopus 로고
    • Method for sampling tissue for research which preserves pathological data in radical prostatectomy
    • Warren AY, Whitaker HC, Haynes B, Sangan T, McDuffus LA, Kay JD & Neal DE 2013 Method for sampling tissue for research which preserves pathological data in radical prostatectomy. Prostate 73 194-202. (doi:10.1002/pros.22556)
    • (2013) Prostate , vol.73 , pp. 194-202
    • Warren, A.Y.1    Whitaker, H.C.2    Haynes, B.3    Sangan, T.4    McDuffus, L.A.5    Kay, J.D.6    Neal, D.E.7
  • 77
    • 84882738244 scopus 로고    scopus 로고
    • Transcription factor binding in human cells occurs in dense clusters formed around cohesin anchor sites
    • Yan J, Enge M, Whitington T, Dave K, Liu J, Sur I, Schmierer B, Jolma A, Kivioja T, Taipale M et al. 2013 Transcription factor binding in human cells occurs in dense clusters formed around cohesin anchor sites. Cell 154 801-813. (doi:10.1016/j.cell.2013.07.034)
    • (2013) Cell , vol.154 , pp. 801-813
    • Yan, J.1    Enge, M.2    Whitington, T.3    Dave, K.4    Liu, J.5    Sur, I.6    Schmierer, B.7    Jolma, A.8    Kivioja, T.9    Taipale, M.10
  • 78
    • 77952103123 scopus 로고    scopus 로고
    • An integrated network of androgen receptor, polycomb, and TMPRSS2-ERG gene fusions in prostate cancer progression
    • Yu J, Yu J, Mani RS, Cao Q, Brenner CJ, Cao X, Wang X, Wu L, Li J, Hu M et al. 2010 An integrated network of androgen receptor, polycomb, and TMPRSS2-ERG gene fusions in prostate cancer progression. Cancer Cell 17 443-454. (doi:10.1016/j.ccr.2010.03.018)
    • (2010) Cancer Cell , vol.17 , pp. 443-454
    • Yu, J.1    Yu, J.2    Mani, R.S.3    Cao, Q.4    Brenner, C.J.5    Cao, X.6    Wang, X.7    Wu, L.8    Li, J.9    Hu, M.10


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