-
1
-
-
0037078982
-
Control, exploitation and tolerance of intracellular noise
-
Rao CV, Wolf DM, Arkin AP (2002) Control, exploitation and tolerance of intracellular noise. Nature 420:231-237.
-
(2002)
Nature
, vol.420
, pp. 231-237
-
-
Rao, C.V.1
Wolf, D.M.2
Arkin, A.P.3
-
2
-
-
25444468618
-
Noise in gene expression: Origins, consequences, and control
-
Raser JM, O'Shea EK (2005) Noise in gene expression: Origins, consequences, and control. Science 309:2010-2013.
-
(2005)
Science
, vol.309
, pp. 2010-2013
-
-
Raser, J.M.1
O'Shea, E.K.2
-
4
-
-
33745220278
-
Single-cell proteomic analysis of S. cerevisiae reveals the architecture of biological noise
-
Newman JR, et al. (2006) Single-cell proteomic analysis of S. cerevisiae reveals the architecture of biological noise. Nature 441:840-846.
-
(2006)
Nature
, vol.441
, pp. 840-846
-
-
Newman, J.R.1
-
5
-
-
25144450143
-
Contributions of low molecule number and chromosomal positioning to stochastic gene expression
-
Becskei A, Kaufmann BB, van Oudenaarden A (2005) Contributions of low molecule number and chromosomal positioning to stochastic gene expression. Nat Genet 37:937-944.
-
(2005)
Nat Genet
, vol.37
, pp. 937-944
-
-
Becskei, A.1
Kaufmann, B.B.2
van Oudenaarden, A.3
-
6
-
-
34147131574
-
From fluctuation stophenotypes: The physiology of noise
-
Samoilov MS, PriceG, Arkin AP (2006) From fluctuation stophenotypes: The physiology of noise. Sci STKE 2006:re17.
-
(2006)
Sci STKE
, vol.2006
-
-
Samoilov, M.S.1
Price, G.2
Arkin, A.P.3
-
8
-
-
0036578645
-
Regulation of noise in the expression of a single gene
-
Ozbudak EM, et al. (2002) Regulation of noise in the expression of a single gene. Nat Genet 31:69-73.
-
(2002)
Nat Genet
, vol.31
, pp. 69-73
-
-
Ozbudak, E.M.1
-
10
-
-
15544371346
-
Gene regulation at the single-cell level
-
Rosenfeld N, et al. (2005) Gene regulation at the single-cell level. Science 307:1962-1965.
-
(2005)
Science
, vol.307
, pp. 1962-1965
-
-
Rosenfeld, N.1
-
11
-
-
26944476331
-
Regulated cell-to-cell variation in a cell-fate decision system
-
Colman-Lerner A, et al. (2005) Regulated cell-to-cell variation in a cell-fate decision system. Nature 437:699-706.
-
(2005)
Nature
, vol.437
, pp. 699-706
-
-
Colman-Lerner, A.1
-
12
-
-
16644373292
-
Noise minimization in eukaryotic gene expression
-
Fraser HB, et al. (2004) Noise minimization in eukaryotic gene expression. PLoS Biol 2:e137.
-
(2004)
PLoS Biol
, vol.2
-
-
Fraser, H.B.1
-
13
-
-
34547604468
-
Noise in gene expression determines cell fate in Bacillus subtilis
-
Maamar H, Raj A, Dubnau D (2007) Noise in gene expression determines cell fate in Bacillus subtilis. Science 317:526-529.
-
(2007)
Science
, vol.317
, pp. 526-529
-
-
Maamar, H.1
Raj, A.2
Dubnau, D.3
-
14
-
-
33845616177
-
Phenotypic consequences ofpromoter-mediated transcriptional noise
-
Blake WJ, etal. (2006) Phenotypic consequences ofpromoter-mediated transcriptional noise. Mol Cell 24:853-865.
-
(2006)
Mol Cell
, vol.24
, pp. 853-865
-
-
Blake, W.J.1
-
15
-
-
0036578654
-
Topological and causal structureofthe yeast transcriptional regulatory network
-
GuelzimN, BottaniS, BourgineP, KepesF(2002) Topological and causal structureofthe yeast transcriptional regulatory network. Nat Genet 31:60-63.
-
(2002)
Nat Genet
, vol.31
, pp. 60-63
-
-
Guelzim, N.1
Bottani, S.2
Bourgine, P.3
Kepes, F.4
-
16
-
-
0036578795
-
Network motifs in the transcriptional regulation network of Escherichia coli
-
Shen-Orr SS, Milo R, Mangan S, Alon U (2002) Network motifs in the transcriptional regulation network of Escherichia coli. Nat Genet 31:64-68.
-
(2002)
Nat Genet
, vol.31
, pp. 64-68
-
-
Shen-Orr, S.S.1
Milo, R.2
Mangan, S.3
Alon, U.4
-
17
-
-
0032077377
-
From specific gene regulation to genomic networks: A global analysis of transcriptional regulation in Escherichia coli
-
Thieffry D, Huerta AM, Perez-Rueda E, Collado-Vides J (1998) From specific gene regulation to genomic networks: A global analysis of transcriptional regulation in Escherichia coli. BioEssays 20:433-440.
-
(1998)
BioEssays
, vol.20
, pp. 433-440
-
-
Thieffry, D.1
Huerta, A.M.2
Perez-Rueda, E.3
Collado-Vides, J.4
-
18
-
-
40649083597
-
Strong negativeself regulation of prokaryotic transcription factors increases the intrinsic noise of protein expression
-
Stekel DJ, Jenkins DJ (2008) Strong negativeself regulation of prokaryotic transcription factors increases the intrinsic noise of protein expression. BMC Syst Biol 2:6.
-
(2008)
BMC Syst Biol
, vol.2
, pp. 6
-
-
Stekel, D.J.1
Jenkins, D.J.2
-
19
-
-
0035902599
-
Intrinsic noisein gene regulatory networks
-
ThattaiM, van OudenaardenA (2001) Intrinsic noisein gene regulatory networks. Proc Natl Acad Sci USA 98:8614-8619.
-
(2001)
Proc Natl Acad Sci USA
, vol.98
, pp. 8614-8619
-
-
ThattaiM1
van OudenaardenA2
-
20
-
-
0034212551
-
Engineering stability in gene networks by autoregulation
-
Becskei A, Serrano L (2000) Engineering stability in gene networks by autoregulation. Nature 405:590-593.
-
(2000)
Nature
, vol.405
, pp. 590-593
-
-
Becskei, A.1
Serrano, L.2
-
21
-
-
31844449923
-
Gene network shaping of inherent noise spectra
-
Austin DW, et al. (2006) Gene network shaping of inherent noise spectra. Nature 439:608-611.
-
(2006)
Nature
, vol.439
, pp. 608-611
-
-
Austin, D.W.1
-
22
-
-
0036428761
-
Negative autoregulation speeds the response times of transcription networks
-
Rosenfeld N, Elowitz MB, Alon U (2002) Negative autoregulation speeds the response times of transcription networks. J Mol Biol 323:785-793.
-
(2002)
J Mol Biol
, vol.323
, pp. 785-793
-
-
Rosenfeld, N.1
Elowitz, M.B.2
Alon, U.3
-
23
-
-
0034688173
-
A synthetic oscillatory network of transcriptional regulators
-
Elowitz MB, Leibler S (2000) A synthetic oscillatory network of transcriptional regulators. Nature 403:335-338.
-
(2000)
Nature
, vol.403
, pp. 335-338
-
-
Elowitz, M.B.1
Leibler, S.2
-
24
-
-
57049159362
-
A fast, robust and tunable synthetic gene oscillator
-
Stricker J, et al. (2008) A fast, robust and tunable synthetic gene oscillator. Nature 456:516-519.
-
(2008)
Nature
, vol.456
, pp. 516-519
-
-
Stricker, J.1
-
25
-
-
7744235343
-
Continuous control in bacterial regulatory circuits
-
Batchelor E, Silhavy TJ, Goulian M (2004) Continuous control in bacterial regulatory circuits. J Bacteriol 186:7618-7625.
-
(2004)
J Bacteriol
, vol.186
, pp. 7618-7625
-
-
Batchelor, E.1
Silhavy, T.J.2
Goulian, M.3
-
26
-
-
33846108256
-
Noise in transcription negative feedback loops: Simulation and experimental analysis
-
Dublanche Y, et al. (2006) Noise in transcription negative feedback loops: Simulation and experimental analysis. Mol Syst Biol 2:41.
-
(2006)
Mol Syst Biol
, vol.2
, pp. 41
-
-
Dublanche, Y.1
-
27
-
-
32844455250
-
A bottom-up approach to gene regulation
-
Guido NJ, et al. (2006) A bottom-up approach to gene regulation. Nature 439:856-860.
-
(2006)
Nature
, vol.439
, pp. 856-860
-
-
Guido, N.J.1
-
28
-
-
33744509927
-
Engineering life: Building a fab for biology
-
Bio FAB Group
-
Bio FAB Group (2006) Engineering life: Building a fab for biology. Sci Am 294(6):44-51.
-
(2006)
Sci Am
, vol.294
, Issue.6
, pp. 44-51
-
-
-
29
-
-
36248980394
-
Accurate prediction of gene feedback circuit behavior from component properties
-
Rosenfeld N, et al. (2007) Accurate prediction of gene feedback circuit behavior from component properties. Mol Syst Biol 3:143.
-
(2007)
Mol Syst Biol
, vol.3
, pp. 143
-
-
Rosenfeld, N.1
-
30
-
-
0034688174
-
Construction of a genetic toggle switch in Escherichia coli
-
Gardner TS, Cantor CR, Collins JJ (2000) Construction of a genetic toggle switch in Escherichia coli. Nature 403:339-342.
-
(2000)
Nature
, vol.403
, pp. 339-342
-
-
Gardner, T.S.1
Cantor, C.R.2
Collins, J.J.3
-
31
-
-
0042268512
-
Gene regulation by tetracyclines. Constraints of resistance regulation in bacteria shape TetR for application in eukaryotes
-
Berens C, Hillen W (2003) Gene regulation by tetracyclines. Constraints of resistance regulation in bacteria shape TetR for application in eukaryotes. Eur J Biochem 270:3109-3121.
-
(2003)
Eur J Biochem
, vol.270
, pp. 3109-3121
-
-
Berens, C.1
Hillen, W.2
-
32
-
-
34547925618
-
Combinatorial promoter design for engineering noisy gene expression
-
Murphy KF, Balázsi G, Collins JJ (2007) Combinatorial promoter design for engineering noisy gene expression. Proc Natl Acad Sci USA 104:12726-12731.
-
(2007)
Proc Natl Acad Sci USA
, vol.104
, pp. 12726-12731
-
-
Murphy, K.F.1
Balázsi, G.2
Collins, J.J.3
-
33
-
-
0041930790
-
Artificial regulatory networks and cascades for discrete multilevel transgene control in mammalian cells
-
Kramer BP, Weber W, Fussenegger M (2003) Artificial regulatory networks and cascades for discrete multilevel transgene control in mammalian cells. Biotechnol Bioeng 83:810-820.
-
(2003)
Biotechnol Bioeng
, vol.83
, pp. 810-820
-
-
Kramer, B.P.1
Weber, W.2
Fussenegger, M.3
-
34
-
-
2942718723
-
Control of stochasticity in eukaryotic gene expression
-
Raser JM, O'Shea EK (2004) Control of stochasticity in eukaryotic gene expression. Science 304:1811-1814.
-
(2004)
Science
, vol.304
, pp. 1811-1814
-
-
Raser, J.M.1
O'Shea, E.K.2
-
35
-
-
2942577478
-
Tet repressor residues indirectly recognizing anhydrotetracycline
-
Schubert P, Pfleiderer K, Hillen W (2004) Tet repressor residues indirectly recognizing anhydrotetracycline. Eur J Biochem 271:2144-2152.
-
(2004)
Eur J Biochem
, vol.271
, pp. 2144-2152
-
-
Schubert, P.1
Pfleiderer, K.2
Hillen, W.3
-
36
-
-
0033538531
-
Fundamentally different logic of gene regulation in eukaryotes and prokaryotes
-
Struhl K (1999) Fundamentally different logic of gene regulation in eukaryotes and prokaryotes. Cell 98:1-4.
-
(1999)
Cell
, vol.98
, pp. 1-4
-
-
Struhl, K.1
-
37
-
-
33751526035
-
Spike-frequency adaptation and intrinsic properties ofan identified, looming-sensitive neuron
-
Gabbiani F, Krapp HG(2006) Spike-frequency adaptation and intrinsic properties ofan identified, looming-sensitive neuron. J Neurophysiol 96:2951-2962.
-
(2006)
J Neurophysiol
, vol.96
, pp. 2951-2962
-
-
Gabbiani, F.1
Krapp, H.G.2
-
38
-
-
0032186220
-
Linearizationo fF-I curves by adaptation
-
Ermentrout B(1998) Linearizationo fF-I curves by adaptation. Neural Comput 10:1721-1729.
-
(1998)
Neural Comput
, vol.10
, pp. 1721-1729
-
-
Ermentrout, B.1
-
39
-
-
0842285841
-
Summing up the noise in gene networks
-
Paulsson J (2004) Summing up the noise in gene networks. Nature 427:415-418.
-
(2004)
Nature
, vol.427
, pp. 415-418
-
-
Paulsson, J.1
-
40
-
-
14844358192
-
Ultrasensitivity and noise propagation in a synthetic transcriptional cascade
-
Hooshangi S, Thiberge S, Weiss R (2005) Ultrasensitivity and noise propagation in a synthetic transcriptional cascade. Proc Natl Acad Sci USA 102:3581-3586.
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, pp. 3581-3586
-
-
Hooshangi, S.1
Thiberge, S.2
Weiss, R.3
-
42
-
-
0016145568
-
Comparison of classical and autogenous systems of regulation in inducible operons
-
Savageau MA (1974) Comparison of classical and autogenous systems of regulation in inducible operons. Nature 252:546-549.
-
(1974)
Nature
, vol.252
, pp. 546-549
-
-
Savageau, M.A.1
-
43
-
-
0031845609
-
Spatial and temporal targeting of gene expression in Drosophila by means of a tetracycline-dependent transactivator system
-
Bello B, Resendez-Perez D, Gehring WJ (1998) Spatial and temporal targeting of gene expression in Drosophila by means of a tetracycline-dependent transactivator system. Development 125:2193-2202.
-
(1998)
Development
, vol.125
, pp. 2193-2202
-
-
Bello, B.1
Resendez-Perez, D.2
Gehring, W.J.3
-
44
-
-
0028954118
-
Studies on the transformation of intact yeast cells by the LiAc/SS-DNA/PEG procedure
-
Gietz RD, Schiestl RH, Willems AR, Woods RA (1995) Studies on the transformation of intact yeast cells by the LiAc/SS-DNA/PEG procedure. Yeast 11:355-360.
-
(1995)
Yeast
, vol.11
, pp. 355-360
-
-
Gietz, R.D.1
Schiestl, R.H.2
Willems, A.R.3
Woods, R.A.4
-
45
-
-
17644396339
-
Dizzy: Stochastic simulation of large-scale genetic regulatory networks
-
Ramsey S, Orrell D, Bolouri H (2005) Dizzy: Stochastic simulation of large-scale genetic regulatory networks. J Bioinform Comput Biol 3:415-436.
-
(2005)
J Bioinform Comput Biol
, vol.3
, pp. 415-436
-
-
Ramsey, S.1
Orrell, D.2
Bolouri, H.3
|