Beadarray: R classes and methods for Illumina bead-based data

Bioinformatics

Volumn 23, Issue 16, 2007, Pages 2183-2184

  Dunning, Mark J ^a   Smith, Mike L ^a   Ritchie, Matthew E ^a   Tavaré, Simon ^a  

^a UNIVERSITY OF CAMBRIDGE   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; BIOINFORMATICS; COMPUTER INTERFACE; COMPUTER PROGRAM; GENE TECHNOLOGY; GENOME ANALYSIS; IMAGE PROCESSING; MICROARRAY ANALYSIS; PRIORITY JOURNAL; QUALITY CONTROL; STATISTICAL ANALYSIS;

EID: 34548561818     PISSN: 13674803     EISSN: 13674811     Source Type: Journal    
DOI: 10.1093/bioinformatics/btm311     Document Type: Article

References (7)

1. Dunning,M.J. et al. (2006) Quality control and low-level statistical analysis of Illumina BeadArrays. Revstat, 4, 1-30.
2. Eggle,D. and Schultz,J. (2007) IlluminaGUI: Graphical User Interface for analyzing gene expression data generated on the Illumina platform. Bioinformatics, In Press.
3. Gautier,L. et al. (2004) affy-analysis of Affymetrix GeneChip data at the probe level. Bioinformatics, 20, 307-315.
4. Gentleman,R.C. et al. (2004) Bioconductor: Open software development for computational biology and bioinformatics. Genome Biol., 5,R80.
5. Gunderson,K.L. et al. (2004) Decoding randomly ordered DNA arrays. Genome Res., 14, 870-877.
6. Kuhn,K. et al. (2004) A novel, high-performance random array platform for quantitative gene expression profiling. Genome Res., 14, 2347-2356.
7. Smyth,G.K. (2005) Limma: Linear models for microarray data. In Gentleman,R. et al. (eds) Bioinformatics and Computational Biology Solutions Using R and Bioconductor. Springer, New York. pp. 397-420.