Genetic and technological characterisation of vineyard- and winery-associated lactic acid bacteria

BioMed Research International

Volumn 2015, Issue , 2015, Pages

  Nisiotou, Aspasia A ^a   Dourou, Dimitra ^a   Filippousi, Maria Evangelia ^a   Diamantea, Ellie ^a   Fragkoulis, Petros ^a   Tassou, Chryssoula ^b   Banilas, Georgios ^a  

^a UNIVERSITY OF WEST ATTICA   (Greece)

^b Institute of Technology of Agricultural Products   (Greece)

Author keywords

[No Author keywords available]

Indexed keywords

ALCOHOL; BIOGENIC AMINE;

ARTICLE; ENTEROCOCCUS; FERMENTATION; GENETIC ANALYSIS; GENETIC VARIABILITY; GRAPE; GREECE; LACTIC ACID BACTERIUM; LACTOBACILLUS; LACTOBACILLUS CASEI; LACTOBACILLUS GRAMINIS; LACTOBACILLUS HILGARDII; LACTOBACILLUS PENTOSUS; LACTOBACILLUS PLANTARUM; LACTOCOCCUS LACTIS; LEUCONOSTOC; LIMIT OF DETECTION; MICROBIAL COMMUNITY; MULTIPLEX POLYMERASE CHAIN REACTION; NEXT GENERATION SEQUENCING; NONHUMAN; NUTRITIONAL REQUIREMENT; OENOCOCCUS OENI; PEDIOCOCCUS; PEDIOCOCCUS PARVULUS; PEDIOCOCCUS PENTOSACEUS; PH; PHYLOGENY; POPULATION DENSITY; SPECIES DIVERSITY; SPECIES IDENTIFICATION; SPECIES RICHNESS; STAPHYLOCOCCUS EPIDERMIDIS; VINEYARD; WEISSELLA; WINE; WINE INDUSTRY; GENETICS; ISOLATION AND PURIFICATION; METABOLISM; OENOCOCCUS;

LACTOBACILLUS GRAMINIS; LACTOBACILLUS HILGARDII; LACTOBACILLUS PLANTARUM; OENOCOCCUS OENI; PEDIOCOCCUS PENTOSACEUS; VITACEAE;

GREECE; LACTOBACILLUS PLANTARUM; OENOCOCCUS; PEDIOCOCCUS;

EID: 84926429987     PISSN: 23146133     EISSN: 23146141     Source Type: Journal    
DOI: 10.1155/2015/508254     Document Type: Article

References (45)

1. A. Lonvaud-Funel, "Lactic acid bacteria in the quality improvement and depreciation of wine," Antonie van Leeuwenhoek, Vol. 76, no. 1-4, pp. 317-331, 1999.
2. T. Henick-Kling, "Malolactic fermentation," in Wine Microbiology and Biotechnology, G. H. Fleet, Ed., pp. 289-326, Harwood Academic Publisher, Chur, Switzerland, 1993.
3. S.-Q. Liu, "Malolactic fermentation in wine - beyond deacidification," Journal of Applied Microbiology, Vol. 92, no. 4, pp. 589-601, 2002.
4. A. Y. Smit, W. J. du Toit, and M. du Toit, "Biogenic amines in wine: understanding the headache," South African Journal of Enology & Viticulture, Vol. 29, no. 2, pp. 109-127, 2008.
5. EFSA Panel on Biological Hazards (BIOHAZ), "Scientific opinion on risk based control of biogenic amine formation in fermented foods," EFSA Journal, Vol. 9, no. 10, article 2393, 2011.
6. P. J. Martín-Álvarez, Á. Marcobal, C. Polo, and M. V. Moreno-Arribas, "Influence of technological practices on biogenic amine contents in red wines," European Food Research and Technology, Vol. 222, no. 3-4, pp. 420-424, 2006.
7. G. Spano, P. Russo, A. Lonvaud-Funel et al., "Biogenic amines in fermented foods," European Journal of Clinical Nutrition, Vol. 64, pp. 95-100, 2010.
8. A. García-Ruiz, E. M. González-Rompinelli, B. Bartolomé, and M. V. Moreno-Arribas, "Potential of wine-associated lactic acid bacteria to degrade biogenic amines," International Journal of Food Microbiology, Vol. 148, no. 2, pp. 115-120, 2011.
9. R. López, I. López-Alfaro, A. R. Gutiérrez et al., "Malolactic fermentation of Tempranillo wine: contribution of the lactic acid bacteria inoculation to sensory quality and chemical composition," International Journal of Food Science and Technology, Vol. 46, no. 11, pp. 2373-2381, 2011.
10. A. A. Nisiotou, K. Rantsiou, V. Iliopoulos, L. Cocolin, and G.-J. E. Nychas, "Bacterial species associated with sound and Botrytis-infected grapes from a Greek vineyard," International Journal of Food Microbiology, Vol. 145, no. 2-3, pp. 432-436, 2011.
11. S. Maicas, I. Pardo, and S. Ferrer, "The effects of freezing and freeze-drying of Oenococcus oeni upon induction of malolactic fermentation in red wine," International Journal of Food Science and Technology, Vol. 35, no. 1, pp. 75-79, 2000.
12. L. Solieri, F. Genova, M. De Paola, and P. Giudici, "Characterization and technological properties of Oenococcus oeni strains from wine spontaneous malolactic fermentations: a framework for selection of new starter cultures," Journal of Applied Microbiology, Vol. 108, no. 1, pp. 285-298, 2010.
13. V. Capozzi, P. Russo, V. Ladero et al., "Biogenic amines degradation by Lactobacillus plantarum: toward a potential application in wine," Frontiers in Microbiology, Vol. 3, article 122, 2012.
14. M. Manzano, L. Cocolin, C. Cantoni, and G. Comi, "Bacillus cereus, Bacillus thuringiensis and Bacillus mycoides differentiation using a PCR-RE technique," International Journal of Food Microbiology, Vol. 81, no. 3, pp. 249-254, 2003.
15. A. M. Rodas, S. Ferrer, and I. Pardo, "16S-ARDRA, a tool for identification of lactic acid bacteria isolated from grape must and wine," Systematic and Applied Microbiology, Vol. 26, no. 3, pp. 412-422, 2003.
16. S. Torriani, G. E. Felis, and F. Dellaglio, "Differentiation of Lactobacillus plantarum, L. pentosus, and L. paraplantarum by recA gene sequence analysis and multiplex PCR assay with recA genederived primers," Applied and Environmental Microbiology, Vol. 67, no. 8, pp. 3450-3454, 2001.
17. N. Klijn, A. H. Weerkamp, and W. M. de Vos, "Identification of mesophilic lactic acid bacteria by using polymerase chain reaction-amplified variable regions of 16S rRNA and specific DNA probes," Applied and Environmental Microbiology, Vol. 57, no. 11, pp. 3390-3393, 1991.
18. J. Versalovic, M. Schneider, F. J. De Bruijn, and J. R. Lupski, "Genomic fingerprinting of bacteria using repetitive sequence-based polymerase chain reaction," Methods in Molecular and Cellular Biology, Vol. 5, no. 1, pp. 25-40, 1994.
19. D. Gevers, G. Huys, and J. Swings, "Applicability of rep-PCR fingerprinting for identification of Lactobacillus species," FEMS Microbiology Letters, Vol. 205, no. 1, pp. 31-36, 2001.
20. C. Fontana, P. S. Cocconcelli, and G. Vignolo, "Monitoring the bacterial population dynamics during fermentation of artisanal Argentinean sausages," International Journal of Food Microbiology, Vol. 103, no. 2, pp. 131-142, 2005.
21. M.-L. Johansson, M. Quednau, G. Molin, and S. Ahrne, "Randomly amplified polymorphic DNA (RAPD) for rapid typing of Lactobacillus plantarum strains," Letters in Applied Microbiology, Vol. 21, no. 3, pp. 155-159, 1995.
22. G. Spano, L. Beneduce, D. Tarantino, G. Zapparoli, and S. Massa, "Characterization of Lactobacillus plantarum from wine must by PCR species-specific and RAPD-PCR," Letters in Applied Microbiology, Vol. 35, no. 5, pp. 370-374, 2002.
23. F. C. Yeh and T. J. B. Boyle, "Population genetic analysis of codominant and dominant markers and quantitative traits," Belgian Journal of Botany, Vol. 129, p. 157, 1997.
24. M. Coton, A. Romano, G. Spano et al., "Occurrence of biogenic amine-forming lactic acid bacteria in wine and cider," Food Microbiology, Vol. 27, no. 8, pp. 1078-1085, 2010.
25. U. Edwars, T. Rogall, H. Blocker, M. Emde, and E. C. Bottger, "Isolation and direct complete nucleotide determination of entire genes. Characterization of a gene coding for 16S ribosomal RNA," Nucleic Acids Research, Vol. 17, no. 19, pp. 7843-7853, 1989.
26. R. L. Maijala, "Formation of histamine and tyramine by some lactic acid bacteria in MRS-broth and modified decarboxylation agar," Letters in Applied Microbiology, Vol. 17, no. 1, pp. 40-43, 1993.
27. S. Lafon Lafourcade, E. Carre, and P. Ribéreau-Gayon, "Occurrence of lactic acid bacteria during the different stages of vinification and conservation of wines," Applied and Environmental Microbiology, Vol. 46, no. 4, pp. 874-880, 1983.
28. K. C. Fugelsang and C. G. Edwards, "Microbial ecology during vinification," in Wine Microbiology: Practical Applications and Procedures, K. C. Fugelsang and C. G. Edwards, Eds., Springer, New York, NY, USA, 2nd edition, 2007.
29. S. Bae, G. H. Fleet, and G. M. Heard, "Lactic acid bacteria associated with wine grapes from several Australian vineyards," Journal of Applied Microbiology, Vol. 100, no. 4, pp. 712-727, 2006.
30. N. Francesca, L. Settanni, C. Sannino, M. Aponte, and G. Moschetti, "Ecology and technological capability of lactic acid bacteria isolated during Grillo grape vinification in the Marsala production area," Annals of Microbiology, Vol. 61, no. 1, pp. 79-84, 2011.
31. A. Barata, M. Malfeito-Ferreira, and V. Loureiro, "Changes in sour rotten grape berry microbiota during ripening and wine fermentation," International Journal of Food Microbiology, Vol. 154, no. 3, pp. 152-161, 2012.
32. P. Ribéreau-Gayon, D. Dubourdieu, B. Donèche, and A. Lonvaud, "The microbiology of wine and vinifications," in Handbook of Enology, P. Ribéreau-Gayon, Ed., Vol. 1, John Wiley & Sons, Chichester, UK, 2006.
33. D. Wibowo, R. Eschenbruch, D. R. Davis, G. H. Fleet, and T. H. Lee, "Occurrence and growth of lactic acid bacteria in wine: a review," The American Journal of Enology and Viticulture, Vol. 36, no. 4, pp. 302-313, 1985.
34. A. Lonvaud-Funel, A. Joyeux, and O. Ledoux, "Specific enumeration of lactic acid bacteria in fermenting grape must and wine by colony hybridization with non-isotopic DNA probes," The Journal of Applied Bacteriology, Vol. 71, no. 6, pp. 501-508, 1991.
35. H. J. J. van Vuuren and L. M. T. Dicks, "Leuconostoc oenos: a review," American Journal of Enology and Viticulture, Vol. 44, no. 1, pp. 99-112, 1993.
36. H. Volschenk, H. J. J. van Vuuren, and M. Viljoen-Bloom, "Malic acid in wine: origin, function and metabolism during vinification," South African Journal of Enology and Viticulture, Vol. 27, no. 2, pp. 123-136, 2006.
37. R. S. Jackson, "Origin and growth of lactic acid bacteria," in Wine Science: Principles and Applications, R. S. Jackson, Ed., pp. 394-402, Academic Press, San Diego, Calif, USA, 2008.
38. M. du Toit, L. Engelbrecht, E. Lerm, and S. Krieger-Weber, "Lactobacillus: the next generation of malolactic fermentation starter cultures - an overview," Food and Bioprocess Technology, Vol. 4, no. 6, pp. 876-906, 2011.
39. V. Renouf, O. Claisse, and A. Lonvaud-Funel, "Inventory and monitoring of wine microbial consortia," Applied Microbiology and Biotechnology, Vol. 75, no. 1, pp. 149-164, 2007.
40. M. Dols-Lafargue, H. Y. Lee, C. le Marrec, A. Heyraud, G. Chambat, and A. Lonvaud-Funel, "Characterization of gtf, a glucosyltransferase gene in the genomes of Pediococcus parvulus and Oenococcus oeni, two bacterial species commonly found in wine," Applied and Environmental Microbiology, Vol. 74, no. 13, pp. 4079-4090, 2008.
41. J. M. Landete, S. Ferrer, and I. Pardo, "Which lactic acid bacteria are responsible for histamine production in wine?" Journal of Applied Microbiology, Vol. 99, no. 3, pp. 580-586, 2005.
42. C. Belfiore, R. R. Raya, and G. M. Vignolo, "Identification, technological and safety characterization of Lactobacillus sakei and Lactobacillus curvatus isolated from Argentinean anchovies (Engraulis anchoita)," SpringerPlus, Vol. 2, no. 1, article 257, 2013.
43. N. A. Bokulich, J. H. Thorngate, P. M. Richardson, and D. A. Mills, "Microbial biogeography of wine grapes is conditioned by cultivar, vintage, and climate," Proceedings of the National Academy of Sciences of the United States of America, Vol. 111, no. 1, pp. E139-E148, 2014.
44. J. A. Gilbert, D. van der Lelie, and I. Zarraonaindia, "Microbial terroir for wine grapes," Proceedings of the National Academy of Sciences of the United States of America, Vol. 111, no. 1, pp. 5-6, 2014.
45. D. Schuller, H. Alves, S. Dequin, and M. Casal, "Ecological survey of Saccharomyces cerevisiae strains from vineyards in the Vinho Verde Region of Portugal," FEMS Microbiology Ecology, Vol. 51, no. 2, pp. 167-177, 2005.