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Volumn 10, Issue 8, 2014, Pages

Branch Migration Prevents DNA Loss during Double-Strand Break Repair

Author keywords

[No Author keywords available]

Indexed keywords

CELL PROTEIN; DOUBLE STRANDED DNA; PROTEIN RUVAB; RECG HELICASE; UNCLASSIFIED DRUG; BACTERIAL PROTEIN; CRUCIFORM DNA; DNA BINDING PROTEIN; DNA HELICASE; ESCHERICHIA COLI PROTEIN; HOLLIDAY JUNCTION DNA HELICASE, E COLI; RECG PROTEIN, E COLI; RUVB PROTEIN, BACTERIA;

EID: 84926227384     PISSN: 15537390     EISSN: 15537404     Source Type: Journal    
DOI: 10.1371/journal.pgen.1004485     Document Type: Article
Times cited : (26)

References (53)
  • 1
    • 0035695023 scopus 로고    scopus 로고
    • Recombination at double-strand breaks and DNA ends: conserved mechanisms from phage to humans
    • Cromie GA, Connelly JC, Leach DR, (2001) Recombination at double-strand breaks and DNA ends: conserved mechanisms from phage to humans. Mol Cell 8: 1163–1174.
    • (2001) Mol Cell , vol.8 , pp. 1163-1174
    • Cromie, G.A.1    Connelly, J.C.2    Leach, D.R.3
  • 3
    • 84869065150 scopus 로고    scopus 로고
    • Chromothripsis: chromosomes in crisis
    • Jones MJ, Jallepalli PV, (2012) Chromothripsis: chromosomes in crisis. Dev Cell 23: 908–917.
    • (2012) Dev Cell , vol.23 , pp. 908-917
    • Jones, M.J.1    Jallepalli, P.V.2
  • 4
    • 0036468807 scopus 로고    scopus 로고
    • Genome architecture, rearrangements and genomic disorders
    • Stankiewicz P, Lupski JR, (2002) Genome architecture, rearrangements and genomic disorders. Trends Genet 18: 74–82.
    • (2002) Trends Genet , vol.18 , pp. 74-82
    • Stankiewicz, P.1    Lupski, J.R.2
  • 5
    • 84956504647 scopus 로고    scopus 로고
    • Brown TA (2002). Genomes. 2nd edition. Oxford: Wiley-Liss.
    • (2002)
    • Brown, T.A.1
  • 6
    • 40649101678 scopus 로고    scopus 로고
    • SbcCD causes a double-strand break at a DNA palindrome in the Escherichia coli chromosome
    • Eykelenboom JK, Blackwood JK, Okely E, Leach DR, (2008) SbcCD causes a double-strand break at a DNA palindrome in the Escherichia coli chromosome. Mol Cell 29: 644–651.
    • (2008) Mol Cell , vol.29 , pp. 644-651
    • Eykelenboom, J.K.1    Blackwood, J.K.2    Okely, E.3    Leach, D.R.4
  • 7
    • 0028968305 scopus 로고
    • Structure of a multisubunit complex that promotes DNA branch migration
    • Parsons CA, Stasiak A, Bennett RJ, West SC, (1995) Structure of a multisubunit complex that promotes DNA branch migration. Nature 374: 375–378.
    • (1995) Nature , vol.374 , pp. 375-378
    • Parsons, C.A.1    Stasiak, A.2    Bennett, R.J.3    West, S.C.4
  • 8
    • 0026331068 scopus 로고
    • Formation and resolution of recombination intermediates by E. coli RecA and RuvC proteins
    • Dunderdale HJ, Benson FE, Parsons CA, Sharples GJ, Lloyd RG, et al. (1991) Formation and resolution of recombination intermediates by E. coli RecA and RuvC proteins. Nature 354: 506–510.
    • (1991) Nature , vol.354 , pp. 506-510
    • Dunderdale, H.J.1    Benson, F.E.2    Parsons, C.A.3    Sharples, G.J.4    Lloyd, R.G.5
  • 9
    • 0029806695 scopus 로고    scopus 로고
    • Crystal structure of DNA recombination protein RuvA and a model for its binding to the Holliday junction
    • Rafferty JB, Sedelnikova SE, Hargreaves D, Artymiuk PJ, Baker PJ, et al. (1996) Crystal structure of DNA recombination protein RuvA and a model for its binding to the Holliday junction. Science 274: 415–421.
    • (1996) Science , vol.274 , pp. 415-421
    • Rafferty, J.B.1    Sedelnikova, S.E.2    Hargreaves, D.3    Artymiuk, P.J.4    Baker, P.J.5
  • 11
    • 1942488150 scopus 로고    scopus 로고
    • RecG helicase promotes DNA double-strand break repair
    • Meddows TR, Savory AP, Lloyd RG, (2004) RecG helicase promotes DNA double-strand break repair. Mol Microbiol 52: 119–132.
    • (2004) Mol Microbiol , vol.52 , pp. 119-132
    • Meddows, T.R.1    Savory, A.P.2    Lloyd, R.G.3
  • 12
    • 0026009412 scopus 로고
    • Conjugational recombination in resolvase-deficient ruvC mutants of Escherichia coli K-12 depends on recG
    • Lloyd RG, (1991) Conjugational recombination in resolvase-deficient ruvC mutants of Escherichia coli K-12 depends on recG. J Bacteriol 173: 5414–5418.
    • (1991) J Bacteriol , vol.173 , pp. 5414-5418
    • Lloyd, R.G.1
  • 13
    • 0027397630 scopus 로고
    • Dissociation of synthetic Holliday junctions by E. coli RecG protein
    • Lloyd RG, Sharples GJ, (1993) Dissociation of synthetic Holliday junctions by E. coli RecG protein. EMBO J 12: 17–22.
    • (1993) EMBO J , vol.12 , pp. 17-22
    • Lloyd, R.G.1    Sharples, G.J.2
  • 14
    • 0027212716 scopus 로고
    • Processing of recombination intermediates by the RecG and RuvAB proteins of Escherichia coli
    • Lloyd RG, Sharples GJ, (1993) Processing of recombination intermediates by the RecG and RuvAB proteins of Escherichia coli. Nucleic Acids Res 21: 1719–1725.
    • (1993) Nucleic Acids Res , vol.21 , pp. 1719-1725
    • Lloyd, R.G.1    Sharples, G.J.2
  • 15
    • 0027236687 scopus 로고
    • Resolution of Holliday intermediates in recombination and DNA repair: indirect suppression of ruvA, ruvB, and ruvC mutations
    • Mandal TN, Mahdi AA, Sharples GJ, Lloyd RG, (1993) Resolution of Holliday intermediates in recombination and DNA repair: indirect suppression of ruvA, ruvB, and ruvC mutations. J Bacteriol 175: 4325–4334.
    • (1993) J Bacteriol , vol.175 , pp. 4325-4334
    • Mandal, T.N.1    Mahdi, A.A.2    Sharples, G.J.3    Lloyd, R.G.4
  • 16
    • 84876294656 scopus 로고    scopus 로고
    • Evidence for the role of Mycobacterium tuberculosis RecG helicase in DNA repair and recombination
    • Thakur RS, Basavaraju S, Somyajit K, Jain A, Subramanya S, et al. (2013) Evidence for the role of Mycobacterium tuberculosis RecG helicase in DNA repair and recombination. FEBS J 280: 1841–1860.
    • (2013) FEBS J , vol.280 , pp. 1841-1860
    • Thakur, R.S.1    Basavaraju, S.2    Somyajit, K.3    Jain, A.4    Subramanya, S.5
  • 17
    • 0029072794 scopus 로고
    • Branch migration of three-strand recombination intermediates by RecG, a possible pathway for securing exchanges initiated by 3′-tailed duplex DNA
    • Whitby MC, Lloyd RG, (1995) Branch migration of three-strand recombination intermediates by RecG, a possible pathway for securing exchanges initiated by 3′-tailed duplex DNA. EMBO J 14: 3302–3310.
    • (1995) EMBO J , vol.14 , pp. 3302-3310
    • Whitby, M.C.1    Lloyd, R.G.2
  • 18
    • 0027438781 scopus 로고
    • Reverse branch migration of Holliday junctions by RecG protein: a new mechanism for resolution of intermediates in recombination and DNA repair
    • Whitby MC, Ryder L, Lloyd RG, (1993) Reverse branch migration of Holliday junctions by RecG protein: a new mechanism for resolution of intermediates in recombination and DNA repair. Cell 75: 341–350.
    • (1993) Cell , vol.75 , pp. 341-350
    • Whitby, M.C.1    Ryder, L.2    Lloyd, R.G.3
  • 19
    • 0033178272 scopus 로고    scopus 로고
    • RecG helicase activity at three- and four-strand DNA structures
    • McGlynn P, Lloyd RG, (1999) RecG helicase activity at three- and four-strand DNA structures. Nucleic Acids Res 27: 3049–3056.
    • (1999) Nucleic Acids Res , vol.27 , pp. 3049-3056
    • McGlynn, P.1    Lloyd, R.G.2
  • 20
    • 0034737294 scopus 로고    scopus 로고
    • Modulation of RNA polymerase by (p)ppGpp reveals a RecG-dependent mechanism for replication fork progression
    • McGlynn P, Lloyd RG, (2000) Modulation of RNA polymerase by (p)ppGpp reveals a RecG-dependent mechanism for replication fork progression. Cell 101: 35–45.
    • (2000) Cell , vol.101 , pp. 35-45
    • McGlynn, P.1    Lloyd, R.G.2
  • 21
    • 78951475725 scopus 로고    scopus 로고
    • RecG protein and single-strand DNA exonucleases avoid cell lethality associated with PriA helicase activity in Escherichia coli
    • Rudolph CJ, Mahdi AA, Upton AL, Lloyd RG, (2010) RecG protein and single-strand DNA exonucleases avoid cell lethality associated with PriA helicase activity in Escherichia coli. Genetics 186: 473–492.
    • (2010) Genetics , vol.186 , pp. 473-492
    • Rudolph, C.J.1    Mahdi, A.A.2    Upton, A.L.3    Lloyd, R.G.4
  • 22
    • 67651205866 scopus 로고    scopus 로고
    • Pathological replication in cells lacking RecG DNA translocase
    • Rudolph CJ, Upton AL, Harris L, Lloyd RG, (2009) Pathological replication in cells lacking RecG DNA translocase. Mol Microbiol 73: 352–366.
    • (2009) Mol Microbiol , vol.73 , pp. 352-366
    • Rudolph, C.J.1    Upton, A.L.2    Harris, L.3    Lloyd, R.G.4
  • 23
    • 70449560624 scopus 로고    scopus 로고
    • Replication fork collisions cause pathological chromosomal amplification in cells lacking RecG DNA translocase
    • Rudolph CJ, Upton AL, Lloyd RG, (2009) Replication fork collisions cause pathological chromosomal amplification in cells lacking RecG DNA translocase. Mol Microbiol 74: 940–955.
    • (2009) Mol Microbiol , vol.74 , pp. 940-955
    • Rudolph, C.J.1    Upton, A.L.2    Lloyd, R.G.3
  • 25
    • 0029850005 scopus 로고    scopus 로고
    • Modulation of recombination and DNA repair by the RecG and PriA helicases of Escherichia coli K-12
    • Al-Deib AA, Mahdi AA, Lloyd RG, (1996) Modulation of recombination and DNA repair by the RecG and PriA helicases of Escherichia coli K-12. J Bacteriol 178: 6782–6789.
    • (1996) J Bacteriol , vol.178 , pp. 6782-6789
    • Al-Deib, A.A.1    Mahdi, A.A.2    Lloyd, R.G.3
  • 26
    • 0035902591 scopus 로고    scopus 로고
    • Rescue of stalled replication forks by RecG: simultaneous translocation on the leading and lagging strand templates supports an active DNA unwinding model of fork reversal and Holliday junction formation
    • McGlynn P, Lloyd RG, (2001) Rescue of stalled replication forks by RecG: simultaneous translocation on the leading and lagging strand templates supports an active DNA unwinding model of fork reversal and Holliday junction formation. Proc Natl Acad Sci U S A 98: 8227–8234.
    • (2001) Proc Natl Acad Sci U S A , vol.98 , pp. 8227-8234
    • McGlynn, P.1    Lloyd, R.G.2
  • 27
    • 68449088790 scopus 로고    scopus 로고
    • Resolution of joint molecules by RuvABC and RecG following cleavage of the Escherichia coli chromosome by EcoKI
    • Wardrope L, Okely E, Leach D, (2009) Resolution of joint molecules by RuvABC and RecG following cleavage of the Escherichia coli chromosome by EcoKI. PloS one 4: e6542.
    • (2009) PloS one , vol.4 , pp. 6542
    • Wardrope, L.1    Okely, E.2    Leach, D.3
  • 28
    • 0027511858 scopus 로고
    • The recombination hotspot chi is a regulatory sequence that acts by attenuating the nuclease activity of the E. coli RecBCD enzyme
    • Dixon DA, Kowalczykowski SC, (1993) The recombination hotspot chi is a regulatory sequence that acts by attenuating the nuclease activity of the E. coli RecBCD enzyme. Cell 73: 87–96.
    • (1993) Cell , vol.73 , pp. 87-96
    • Dixon, D.A.1    Kowalczykowski, S.C.2
  • 29
    • 36049052525 scopus 로고    scopus 로고
    • RecBCD enzyme switches lead motor subunits in response to chi recognition
    • Spies M, Amitani I, Baskin RJ, Kowalczykowski SC, (2007) RecBCD enzyme switches lead motor subunits in response to chi recognition. Cell 131: 694–705.
    • (2007) Cell , vol.131 , pp. 694-705
    • Spies, M.1    Amitani, I.2    Baskin, R.J.3    Kowalczykowski, S.C.4
  • 30
    • 0026720049 scopus 로고
    • RecBCD enzyme is altered upon cutting DNA at a chi recombination hotspot
    • Taylor AF, Smith GR, (1992) RecBCD enzyme is altered upon cutting DNA at a chi recombination hotspot. Proc Natl Acad Sci U S A 89: 5226–5230.
    • (1992) Proc Natl Acad Sci U S A , vol.89 , pp. 5226-5230
    • Taylor, A.F.1    Smith, G.R.2
  • 33
    • 33750946025 scopus 로고    scopus 로고
    • Replication arrest-stimulated recombination: Dependence on the RecA paralog, RadA/Sms and translesion polymerase, DinB
    • Lovett ST, (2006) Replication arrest-stimulated recombination: Dependence on the RecA paralog, RadA/Sms and translesion polymerase, DinB. DNA repair 5: 1421–1427.
    • (2006) DNA repair , vol.5 , pp. 1421-1427
    • Lovett, S.T.1
  • 34
    • 0027420692 scopus 로고
    • A sister-strand exchange mechanism for recA-independent deletion of repeated DNA sequences in Escherichia coli
    • Lovett ST, Drapkin PT, Sutera VA, JrGluckman-Peskind TJ, (1993) A sister-strand exchange mechanism for recA-independent deletion of repeated DNA sequences in Escherichia coli. Genetics 135: 631–642.
    • (1993) Genetics , vol.135 , pp. 631-642
    • Lovett, S.T.1    Drapkin, P.T.2    Sutera, V.A.3    Gluckman-Peskind, T.J.4
  • 35
    • 0032900580 scopus 로고    scopus 로고
    • Tandem repeat recombination induced by replication fork defects in Escherichia coli requires a novel factor, RadC
    • Saveson CJ, Lovett ST, (1999) Tandem repeat recombination induced by replication fork defects in Escherichia coli requires a novel factor, RadC. Genetics 152: 5–13.
    • (1999) Genetics , vol.152 , pp. 5-13
    • Saveson, C.J.1    Lovett, S.T.2
  • 36
    • 48149090365 scopus 로고    scopus 로고
    • DNA double strand break repair and crossing over mediated by RuvABC resolvase and RecG translocase
    • Grove JI, Harris L, Buckman C, Lloyd RG, (2008) DNA double strand break repair and crossing over mediated by RuvABC resolvase and RecG translocase. DNA repair 7: 1517–1530.
    • (2008) DNA repair , vol.7 , pp. 1517-1530
    • Grove, J.I.1    Harris, L.2    Buckman, C.3    Lloyd, R.G.4
  • 37
    • 77956628003 scopus 로고    scopus 로고
    • Promoting and avoiding recombination: contrasting activities of the Escherichia coli RuvABC Holliday junction resolvase and RecG DNA translocase
    • Zhang J, Mahdi AA, Briggs GS, Lloyd RG, (2010) Promoting and avoiding recombination: contrasting activities of the Escherichia coli RuvABC Holliday junction resolvase and RecG DNA translocase. Genetics 185: 23–37.
    • (2010) Genetics , vol.185 , pp. 23-37
    • Zhang, J.1    Mahdi, A.A.2    Briggs, G.S.3    Lloyd, R.G.4
  • 38
    • 0038799991 scopus 로고    scopus 로고
    • Multiple pathways of recombination induced by double-strand breaks in Saccharomyces cerevisiae
    • Paques F, Haber JE, (1999) Multiple pathways of recombination induced by double-strand breaks in Saccharomyces cerevisiae. Microbiol Mol Biol Rev 63: 349–404.
    • (1999) Microbiol Mol Biol Rev , vol.63 , pp. 349-404
    • Paques, F.1    Haber, J.E.2
  • 39
    • 0028972024 scopus 로고
    • Identification of double Holliday junctions as intermediates in meiotic recombination
    • Schwacha A, Kleckner N, (1995) Identification of double Holliday junctions as intermediates in meiotic recombination. Cell 83: 783–791.
    • (1995) Cell , vol.83 , pp. 783-791
    • Schwacha, A.1    Kleckner, N.2
  • 40
    • 77950862944 scopus 로고    scopus 로고
    • Double Holliday junctions are intermediates of DNA break repair
    • Bzymek M, Thayer NH, Oh SD, Kleckner N, Hunter N, (2010) Double Holliday junctions are intermediates of DNA break repair. Nature 464: 937–941.
    • (2010) Nature , vol.464 , pp. 937-941
    • Bzymek, M.1    Thayer, N.H.2    Oh, S.D.3    Kleckner, N.4    Hunter, N.5
  • 41
    • 0042706141 scopus 로고    scopus 로고
    • Control of cross-over by single-strand DNA resection
    • Prado F, Aguilera A, (2003) Control of cross-over by single-strand DNA resection. Trends Genet 19: 428–431.
    • (2003) Trends Genet , vol.19 , pp. 428-431
    • Prado, F.1    Aguilera, A.2
  • 43
    • 34247611513 scopus 로고    scopus 로고
    • Template switching during break-induced replication
    • Smith CE, Llorente B, Symington LS, (2007) Template switching during break-induced replication. Nature 447: 102–105.
    • (2007) Nature , vol.447 , pp. 102-105
    • Smith, C.E.1    Llorente, B.2    Symington, L.S.3
  • 44
    • 84882372684 scopus 로고    scopus 로고
    • Break-induced replication occurs by conservative DNA synthesis
    • Donnianni RA, Symington LS, (2013) Break-induced replication occurs by conservative DNA synthesis. Proc Natl Acad Sci U S A 110: 13475–13480.
    • (2013) Proc Natl Acad Sci U S A , vol.110 , pp. 13475-13480
    • Donnianni, R.A.1    Symington, L.S.2
  • 46
    • 84885843906 scopus 로고    scopus 로고
    • Migrating bubble during break-induced replication drives conservative DNA synthesis
    • Saini N, Ramakrishnan S, Elango R, Ayyar S, Zhang Y, et al. (2013) Migrating bubble during break-induced replication drives conservative DNA synthesis. Nature 502: 389–392.
    • (2013) Nature , vol.502 , pp. 389-392
    • Saini, N.1    Ramakrishnan, S.2    Elango, R.3    Ayyar, S.4    Zhang, Y.5
  • 47
    • 59949092789 scopus 로고    scopus 로고
    • A recombination execution checkpoint regulates the choice of homologous recombination pathway during DNA double-strand break repair
    • Jain S, Sugawara N, Lydeard J, Vaze M, Tanguy Le Gac N, et al. (2009) A recombination execution checkpoint regulates the choice of homologous recombination pathway during DNA double-strand break repair. Genes Dev 23: 291–303.
    • (2009) Genes Dev , vol.23 , pp. 291-303
    • Jain, S.1    Sugawara, N.2    Lydeard, J.3    Vaze, M.4    Tanguy Le Gac, N.5
  • 48
    • 0034177963 scopus 로고    scopus 로고
    • PriA-directed replication fork restart in Escherichia coli
    • Marians KJ, (2000) PriA-directed replication fork restart in Escherichia coli. Trends Biochem Sci 25: 185–189.
    • (2000) Trends Biochem Sci , vol.25 , pp. 185-189
    • Marians, K.J.1
  • 49
    • 76749101865 scopus 로고    scopus 로고
    • Recruitment to stalled replication forks of the PriA DNA helicase and replisome-loading activities is essential for survival
    • Gabbai CB, Marians KJ, (2010) Recruitment to stalled replication forks of the PriA DNA helicase and replisome-loading activities is essential for survival. DNA repair 9: 202–209.
    • (2010) DNA repair , vol.9 , pp. 202-209
    • Gabbai, C.B.1    Marians, K.J.2
  • 50
    • 0242300088 scopus 로고    scopus 로고
    • Endogenous DNA double-strand breaks: production, fidelity of repair, and induction of cancer
    • Vilenchik MM, Knudson AG, (2003) Endogenous DNA double-strand breaks: production, fidelity of repair, and induction of cancer. Proc Natl Acad Sci U S A 100: 12871–12876.
    • (2003) Proc Natl Acad Sci U S A , vol.100 , pp. 12871-12876
    • Vilenchik, M.M.1    Knudson, A.G.2
  • 52
    • 10744233671 scopus 로고    scopus 로고
    • Repair of and checkpoint response to topoisomerase I-mediated DNA damage
    • Pommier Y, Redon C, Rao VA, Seiler JA, Sordet O, et al. (2003) Repair of and checkpoint response to topoisomerase I-mediated DNA damage. Mutat Res 532: 173–203.
    • (2003) Mutat Res , vol.532 , pp. 173-203
    • Pommier, Y.1    Redon, C.2    Rao, V.A.3    Seiler, J.A.4    Sordet, O.5
  • 53
    • 36148992972 scopus 로고    scopus 로고
    • Different genetic requirements for repair of replication-born double-strand breaks by sister-chromatid recombination and break-induced replication
    • Cortes-Ledesma F, Tous C, Aguilera A, (2007) Different genetic requirements for repair of replication-born double-strand breaks by sister-chromatid recombination and break-induced replication. Nucleic Acids Res 35: 6560–6570.
    • (2007) Nucleic Acids Res , vol.35 , pp. 6560-6570
    • Cortes-Ledesma, F.1    Tous, C.2    Aguilera, A.3


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