-
1
-
-
0035695023
-
Recombination at double-strand breaks and DNA ends: conserved mechanisms from phage to humans
-
Cromie GA, Connelly JC, Leach DR, (2001) Recombination at double-strand breaks and DNA ends: conserved mechanisms from phage to humans. Mol Cell 8: 1163–1174.
-
(2001)
Mol Cell
, vol.8
, pp. 1163-1174
-
-
Cromie, G.A.1
Connelly, J.C.2
Leach, D.R.3
-
2
-
-
0028102267
-
Biochemistry of homologous recombination in Escherichia coli
-
Kowalczykowski SC, Dixon DA, Eggleston AK, Lauder SD, Rehrauer WM, (1994) Biochemistry of homologous recombination in Escherichia coli. Microbiol Rev 58: 401–465.
-
(1994)
Microbiol Rev
, vol.58
, pp. 401-465
-
-
Kowalczykowski, S.C.1
Dixon, D.A.2
Eggleston, A.K.3
Lauder, S.D.4
Rehrauer, W.M.5
-
3
-
-
84869065150
-
Chromothripsis: chromosomes in crisis
-
Jones MJ, Jallepalli PV, (2012) Chromothripsis: chromosomes in crisis. Dev Cell 23: 908–917.
-
(2012)
Dev Cell
, vol.23
, pp. 908-917
-
-
Jones, M.J.1
Jallepalli, P.V.2
-
4
-
-
0036468807
-
Genome architecture, rearrangements and genomic disorders
-
Stankiewicz P, Lupski JR, (2002) Genome architecture, rearrangements and genomic disorders. Trends Genet 18: 74–82.
-
(2002)
Trends Genet
, vol.18
, pp. 74-82
-
-
Stankiewicz, P.1
Lupski, J.R.2
-
5
-
-
84956504647
-
-
Brown TA (2002). Genomes. 2nd edition. Oxford: Wiley-Liss.
-
(2002)
-
-
Brown, T.A.1
-
6
-
-
40649101678
-
SbcCD causes a double-strand break at a DNA palindrome in the Escherichia coli chromosome
-
Eykelenboom JK, Blackwood JK, Okely E, Leach DR, (2008) SbcCD causes a double-strand break at a DNA palindrome in the Escherichia coli chromosome. Mol Cell 29: 644–651.
-
(2008)
Mol Cell
, vol.29
, pp. 644-651
-
-
Eykelenboom, J.K.1
Blackwood, J.K.2
Okely, E.3
Leach, D.R.4
-
7
-
-
0028968305
-
Structure of a multisubunit complex that promotes DNA branch migration
-
Parsons CA, Stasiak A, Bennett RJ, West SC, (1995) Structure of a multisubunit complex that promotes DNA branch migration. Nature 374: 375–378.
-
(1995)
Nature
, vol.374
, pp. 375-378
-
-
Parsons, C.A.1
Stasiak, A.2
Bennett, R.J.3
West, S.C.4
-
8
-
-
0026331068
-
Formation and resolution of recombination intermediates by E. coli RecA and RuvC proteins
-
Dunderdale HJ, Benson FE, Parsons CA, Sharples GJ, Lloyd RG, et al. (1991) Formation and resolution of recombination intermediates by E. coli RecA and RuvC proteins. Nature 354: 506–510.
-
(1991)
Nature
, vol.354
, pp. 506-510
-
-
Dunderdale, H.J.1
Benson, F.E.2
Parsons, C.A.3
Sharples, G.J.4
Lloyd, R.G.5
-
9
-
-
0029806695
-
Crystal structure of DNA recombination protein RuvA and a model for its binding to the Holliday junction
-
Rafferty JB, Sedelnikova SE, Hargreaves D, Artymiuk PJ, Baker PJ, et al. (1996) Crystal structure of DNA recombination protein RuvA and a model for its binding to the Holliday junction. Science 274: 415–421.
-
(1996)
Science
, vol.274
, pp. 415-421
-
-
Rafferty, J.B.1
Sedelnikova, S.E.2
Hargreaves, D.3
Artymiuk, P.J.4
Baker, P.J.5
-
10
-
-
0031801367
-
Crystal structure of E.coli RuvA with bound DNA Holliday junction at 6 A resolution
-
Hargreaves D, Rice DW, Sedelnikova SE, Artymiuk PJ, Lloyd RG, et al. (1998) Crystal structure of E.coli RuvA with bound DNA Holliday junction at 6 A resolution. Nat Struct Biol 5: 441–446.
-
(1998)
Nat Struct Biol
, vol.5
, pp. 441-446
-
-
Hargreaves, D.1
Rice, D.W.2
Sedelnikova, S.E.3
Artymiuk, P.J.4
Lloyd, R.G.5
-
11
-
-
1942488150
-
RecG helicase promotes DNA double-strand break repair
-
Meddows TR, Savory AP, Lloyd RG, (2004) RecG helicase promotes DNA double-strand break repair. Mol Microbiol 52: 119–132.
-
(2004)
Mol Microbiol
, vol.52
, pp. 119-132
-
-
Meddows, T.R.1
Savory, A.P.2
Lloyd, R.G.3
-
12
-
-
0026009412
-
Conjugational recombination in resolvase-deficient ruvC mutants of Escherichia coli K-12 depends on recG
-
Lloyd RG, (1991) Conjugational recombination in resolvase-deficient ruvC mutants of Escherichia coli K-12 depends on recG. J Bacteriol 173: 5414–5418.
-
(1991)
J Bacteriol
, vol.173
, pp. 5414-5418
-
-
Lloyd, R.G.1
-
13
-
-
0027397630
-
Dissociation of synthetic Holliday junctions by E. coli RecG protein
-
Lloyd RG, Sharples GJ, (1993) Dissociation of synthetic Holliday junctions by E. coli RecG protein. EMBO J 12: 17–22.
-
(1993)
EMBO J
, vol.12
, pp. 17-22
-
-
Lloyd, R.G.1
Sharples, G.J.2
-
14
-
-
0027212716
-
Processing of recombination intermediates by the RecG and RuvAB proteins of Escherichia coli
-
Lloyd RG, Sharples GJ, (1993) Processing of recombination intermediates by the RecG and RuvAB proteins of Escherichia coli. Nucleic Acids Res 21: 1719–1725.
-
(1993)
Nucleic Acids Res
, vol.21
, pp. 1719-1725
-
-
Lloyd, R.G.1
Sharples, G.J.2
-
15
-
-
0027236687
-
Resolution of Holliday intermediates in recombination and DNA repair: indirect suppression of ruvA, ruvB, and ruvC mutations
-
Mandal TN, Mahdi AA, Sharples GJ, Lloyd RG, (1993) Resolution of Holliday intermediates in recombination and DNA repair: indirect suppression of ruvA, ruvB, and ruvC mutations. J Bacteriol 175: 4325–4334.
-
(1993)
J Bacteriol
, vol.175
, pp. 4325-4334
-
-
Mandal, T.N.1
Mahdi, A.A.2
Sharples, G.J.3
Lloyd, R.G.4
-
16
-
-
84876294656
-
Evidence for the role of Mycobacterium tuberculosis RecG helicase in DNA repair and recombination
-
Thakur RS, Basavaraju S, Somyajit K, Jain A, Subramanya S, et al. (2013) Evidence for the role of Mycobacterium tuberculosis RecG helicase in DNA repair and recombination. FEBS J 280: 1841–1860.
-
(2013)
FEBS J
, vol.280
, pp. 1841-1860
-
-
Thakur, R.S.1
Basavaraju, S.2
Somyajit, K.3
Jain, A.4
Subramanya, S.5
-
17
-
-
0029072794
-
Branch migration of three-strand recombination intermediates by RecG, a possible pathway for securing exchanges initiated by 3′-tailed duplex DNA
-
Whitby MC, Lloyd RG, (1995) Branch migration of three-strand recombination intermediates by RecG, a possible pathway for securing exchanges initiated by 3′-tailed duplex DNA. EMBO J 14: 3302–3310.
-
(1995)
EMBO J
, vol.14
, pp. 3302-3310
-
-
Whitby, M.C.1
Lloyd, R.G.2
-
18
-
-
0027438781
-
Reverse branch migration of Holliday junctions by RecG protein: a new mechanism for resolution of intermediates in recombination and DNA repair
-
Whitby MC, Ryder L, Lloyd RG, (1993) Reverse branch migration of Holliday junctions by RecG protein: a new mechanism for resolution of intermediates in recombination and DNA repair. Cell 75: 341–350.
-
(1993)
Cell
, vol.75
, pp. 341-350
-
-
Whitby, M.C.1
Ryder, L.2
Lloyd, R.G.3
-
19
-
-
0033178272
-
RecG helicase activity at three- and four-strand DNA structures
-
McGlynn P, Lloyd RG, (1999) RecG helicase activity at three- and four-strand DNA structures. Nucleic Acids Res 27: 3049–3056.
-
(1999)
Nucleic Acids Res
, vol.27
, pp. 3049-3056
-
-
McGlynn, P.1
Lloyd, R.G.2
-
20
-
-
0034737294
-
Modulation of RNA polymerase by (p)ppGpp reveals a RecG-dependent mechanism for replication fork progression
-
McGlynn P, Lloyd RG, (2000) Modulation of RNA polymerase by (p)ppGpp reveals a RecG-dependent mechanism for replication fork progression. Cell 101: 35–45.
-
(2000)
Cell
, vol.101
, pp. 35-45
-
-
McGlynn, P.1
Lloyd, R.G.2
-
21
-
-
78951475725
-
RecG protein and single-strand DNA exonucleases avoid cell lethality associated with PriA helicase activity in Escherichia coli
-
Rudolph CJ, Mahdi AA, Upton AL, Lloyd RG, (2010) RecG protein and single-strand DNA exonucleases avoid cell lethality associated with PriA helicase activity in Escherichia coli. Genetics 186: 473–492.
-
(2010)
Genetics
, vol.186
, pp. 473-492
-
-
Rudolph, C.J.1
Mahdi, A.A.2
Upton, A.L.3
Lloyd, R.G.4
-
22
-
-
67651205866
-
Pathological replication in cells lacking RecG DNA translocase
-
Rudolph CJ, Upton AL, Harris L, Lloyd RG, (2009) Pathological replication in cells lacking RecG DNA translocase. Mol Microbiol 73: 352–366.
-
(2009)
Mol Microbiol
, vol.73
, pp. 352-366
-
-
Rudolph, C.J.1
Upton, A.L.2
Harris, L.3
Lloyd, R.G.4
-
23
-
-
70449560624
-
Replication fork collisions cause pathological chromosomal amplification in cells lacking RecG DNA translocase
-
Rudolph CJ, Upton AL, Lloyd RG, (2009) Replication fork collisions cause pathological chromosomal amplification in cells lacking RecG DNA translocase. Mol Microbiol 74: 940–955.
-
(2009)
Mol Microbiol
, vol.74
, pp. 940-955
-
-
Rudolph, C.J.1
Upton, A.L.2
Lloyd, R.G.3
-
24
-
-
84883132869
-
Avoiding chromosome pathology when replication forks collide
-
Rudolph CJ, Upton AL, Stockum A, Nieduszynski CA, Lloyd RG, (2013) Avoiding chromosome pathology when replication forks collide. Nature 500: 608–611.
-
(2013)
Nature
, vol.500
, pp. 608-611
-
-
Rudolph, C.J.1
Upton, A.L.2
Stockum, A.3
Nieduszynski, C.A.4
Lloyd, R.G.5
-
25
-
-
0029850005
-
Modulation of recombination and DNA repair by the RecG and PriA helicases of Escherichia coli K-12
-
Al-Deib AA, Mahdi AA, Lloyd RG, (1996) Modulation of recombination and DNA repair by the RecG and PriA helicases of Escherichia coli K-12. J Bacteriol 178: 6782–6789.
-
(1996)
J Bacteriol
, vol.178
, pp. 6782-6789
-
-
Al-Deib, A.A.1
Mahdi, A.A.2
Lloyd, R.G.3
-
26
-
-
0035902591
-
Rescue of stalled replication forks by RecG: simultaneous translocation on the leading and lagging strand templates supports an active DNA unwinding model of fork reversal and Holliday junction formation
-
McGlynn P, Lloyd RG, (2001) Rescue of stalled replication forks by RecG: simultaneous translocation on the leading and lagging strand templates supports an active DNA unwinding model of fork reversal and Holliday junction formation. Proc Natl Acad Sci U S A 98: 8227–8234.
-
(2001)
Proc Natl Acad Sci U S A
, vol.98
, pp. 8227-8234
-
-
McGlynn, P.1
Lloyd, R.G.2
-
27
-
-
68449088790
-
Resolution of joint molecules by RuvABC and RecG following cleavage of the Escherichia coli chromosome by EcoKI
-
Wardrope L, Okely E, Leach D, (2009) Resolution of joint molecules by RuvABC and RecG following cleavage of the Escherichia coli chromosome by EcoKI. PloS one 4: e6542.
-
(2009)
PloS one
, vol.4
, pp. 6542
-
-
Wardrope, L.1
Okely, E.2
Leach, D.3
-
28
-
-
0027511858
-
The recombination hotspot chi is a regulatory sequence that acts by attenuating the nuclease activity of the E. coli RecBCD enzyme
-
Dixon DA, Kowalczykowski SC, (1993) The recombination hotspot chi is a regulatory sequence that acts by attenuating the nuclease activity of the E. coli RecBCD enzyme. Cell 73: 87–96.
-
(1993)
Cell
, vol.73
, pp. 87-96
-
-
Dixon, D.A.1
Kowalczykowski, S.C.2
-
29
-
-
36049052525
-
RecBCD enzyme switches lead motor subunits in response to chi recognition
-
Spies M, Amitani I, Baskin RJ, Kowalczykowski SC, (2007) RecBCD enzyme switches lead motor subunits in response to chi recognition. Cell 131: 694–705.
-
(2007)
Cell
, vol.131
, pp. 694-705
-
-
Spies, M.1
Amitani, I.2
Baskin, R.J.3
Kowalczykowski, S.C.4
-
30
-
-
0026720049
-
RecBCD enzyme is altered upon cutting DNA at a chi recombination hotspot
-
Taylor AF, Smith GR, (1992) RecBCD enzyme is altered upon cutting DNA at a chi recombination hotspot. Proc Natl Acad Sci U S A 89: 5226–5230.
-
(1992)
Proc Natl Acad Sci U S A
, vol.89
, pp. 5226-5230
-
-
Taylor, A.F.1
Smith, G.R.2
-
31
-
-
0021807208
-
Chi-dependent DNA strand cleavage by RecBC enzyme
-
Ponticelli AS, Schultz DW, Taylor AF, Smith GR, (1985) Chi-dependent DNA strand cleavage by RecBC enzyme. Cell 41: 145–151.
-
(1985)
Cell
, vol.41
, pp. 145-151
-
-
Ponticelli, A.S.1
Schultz, D.W.2
Taylor, A.F.3
Smith, G.R.4
-
32
-
-
15444350252
-
The complete genome sequence of Escherichia coli K-12
-
Blattner FR, Plunkett G, 3rdBloch CA, Perna NT, Burland V, et al. (1997) The complete genome sequence of Escherichia coli K-12. Science 277: 1453–1462.
-
(1997)
Science
, vol.277
, pp. 1453-1462
-
-
Blattner, F.R.1
Plunkett, G.2
Bloch, C.A.3
Perna, N.T.4
Burland, V.5
-
33
-
-
33750946025
-
Replication arrest-stimulated recombination: Dependence on the RecA paralog, RadA/Sms and translesion polymerase, DinB
-
Lovett ST, (2006) Replication arrest-stimulated recombination: Dependence on the RecA paralog, RadA/Sms and translesion polymerase, DinB. DNA repair 5: 1421–1427.
-
(2006)
DNA repair
, vol.5
, pp. 1421-1427
-
-
Lovett, S.T.1
-
34
-
-
0027420692
-
A sister-strand exchange mechanism for recA-independent deletion of repeated DNA sequences in Escherichia coli
-
Lovett ST, Drapkin PT, Sutera VA, JrGluckman-Peskind TJ, (1993) A sister-strand exchange mechanism for recA-independent deletion of repeated DNA sequences in Escherichia coli. Genetics 135: 631–642.
-
(1993)
Genetics
, vol.135
, pp. 631-642
-
-
Lovett, S.T.1
Drapkin, P.T.2
Sutera, V.A.3
Gluckman-Peskind, T.J.4
-
35
-
-
0032900580
-
Tandem repeat recombination induced by replication fork defects in Escherichia coli requires a novel factor, RadC
-
Saveson CJ, Lovett ST, (1999) Tandem repeat recombination induced by replication fork defects in Escherichia coli requires a novel factor, RadC. Genetics 152: 5–13.
-
(1999)
Genetics
, vol.152
, pp. 5-13
-
-
Saveson, C.J.1
Lovett, S.T.2
-
36
-
-
48149090365
-
DNA double strand break repair and crossing over mediated by RuvABC resolvase and RecG translocase
-
Grove JI, Harris L, Buckman C, Lloyd RG, (2008) DNA double strand break repair and crossing over mediated by RuvABC resolvase and RecG translocase. DNA repair 7: 1517–1530.
-
(2008)
DNA repair
, vol.7
, pp. 1517-1530
-
-
Grove, J.I.1
Harris, L.2
Buckman, C.3
Lloyd, R.G.4
-
37
-
-
77956628003
-
Promoting and avoiding recombination: contrasting activities of the Escherichia coli RuvABC Holliday junction resolvase and RecG DNA translocase
-
Zhang J, Mahdi AA, Briggs GS, Lloyd RG, (2010) Promoting and avoiding recombination: contrasting activities of the Escherichia coli RuvABC Holliday junction resolvase and RecG DNA translocase. Genetics 185: 23–37.
-
(2010)
Genetics
, vol.185
, pp. 23-37
-
-
Zhang, J.1
Mahdi, A.A.2
Briggs, G.S.3
Lloyd, R.G.4
-
38
-
-
0038799991
-
Multiple pathways of recombination induced by double-strand breaks in Saccharomyces cerevisiae
-
Paques F, Haber JE, (1999) Multiple pathways of recombination induced by double-strand breaks in Saccharomyces cerevisiae. Microbiol Mol Biol Rev 63: 349–404.
-
(1999)
Microbiol Mol Biol Rev
, vol.63
, pp. 349-404
-
-
Paques, F.1
Haber, J.E.2
-
39
-
-
0028972024
-
Identification of double Holliday junctions as intermediates in meiotic recombination
-
Schwacha A, Kleckner N, (1995) Identification of double Holliday junctions as intermediates in meiotic recombination. Cell 83: 783–791.
-
(1995)
Cell
, vol.83
, pp. 783-791
-
-
Schwacha, A.1
Kleckner, N.2
-
40
-
-
77950862944
-
Double Holliday junctions are intermediates of DNA break repair
-
Bzymek M, Thayer NH, Oh SD, Kleckner N, Hunter N, (2010) Double Holliday junctions are intermediates of DNA break repair. Nature 464: 937–941.
-
(2010)
Nature
, vol.464
, pp. 937-941
-
-
Bzymek, M.1
Thayer, N.H.2
Oh, S.D.3
Kleckner, N.4
Hunter, N.5
-
41
-
-
0042706141
-
Control of cross-over by single-strand DNA resection
-
Prado F, Aguilera A, (2003) Control of cross-over by single-strand DNA resection. Trends Genet 19: 428–431.
-
(2003)
Trends Genet
, vol.19
, pp. 428-431
-
-
Prado, F.1
Aguilera, A.2
-
43
-
-
34247611513
-
Template switching during break-induced replication
-
Smith CE, Llorente B, Symington LS, (2007) Template switching during break-induced replication. Nature 447: 102–105.
-
(2007)
Nature
, vol.447
, pp. 102-105
-
-
Smith, C.E.1
Llorente, B.2
Symington, L.S.3
-
44
-
-
84882372684
-
Break-induced replication occurs by conservative DNA synthesis
-
Donnianni RA, Symington LS, (2013) Break-induced replication occurs by conservative DNA synthesis. Proc Natl Acad Sci U S A 110: 13475–13480.
-
(2013)
Proc Natl Acad Sci U S A
, vol.110
, pp. 13475-13480
-
-
Donnianni, R.A.1
Symington, L.S.2
-
45
-
-
79952273242
-
Break-induced replication is highly inaccurate
-
Deem A, Keszthelyi A, Blackgrove T, Vayl A, Coffey B, et al. (2011) Break-induced replication is highly inaccurate. PLoS biology 9: e1000594.
-
(2011)
PLoS biology
, vol.9
, pp. 1000594
-
-
Deem, A.1
Keszthelyi, A.2
Blackgrove, T.3
Vayl, A.4
Coffey, B.5
-
46
-
-
84885843906
-
Migrating bubble during break-induced replication drives conservative DNA synthesis
-
Saini N, Ramakrishnan S, Elango R, Ayyar S, Zhang Y, et al. (2013) Migrating bubble during break-induced replication drives conservative DNA synthesis. Nature 502: 389–392.
-
(2013)
Nature
, vol.502
, pp. 389-392
-
-
Saini, N.1
Ramakrishnan, S.2
Elango, R.3
Ayyar, S.4
Zhang, Y.5
-
47
-
-
59949092789
-
A recombination execution checkpoint regulates the choice of homologous recombination pathway during DNA double-strand break repair
-
Jain S, Sugawara N, Lydeard J, Vaze M, Tanguy Le Gac N, et al. (2009) A recombination execution checkpoint regulates the choice of homologous recombination pathway during DNA double-strand break repair. Genes Dev 23: 291–303.
-
(2009)
Genes Dev
, vol.23
, pp. 291-303
-
-
Jain, S.1
Sugawara, N.2
Lydeard, J.3
Vaze, M.4
Tanguy Le Gac, N.5
-
48
-
-
0034177963
-
PriA-directed replication fork restart in Escherichia coli
-
Marians KJ, (2000) PriA-directed replication fork restart in Escherichia coli. Trends Biochem Sci 25: 185–189.
-
(2000)
Trends Biochem Sci
, vol.25
, pp. 185-189
-
-
Marians, K.J.1
-
49
-
-
76749101865
-
Recruitment to stalled replication forks of the PriA DNA helicase and replisome-loading activities is essential for survival
-
Gabbai CB, Marians KJ, (2010) Recruitment to stalled replication forks of the PriA DNA helicase and replisome-loading activities is essential for survival. DNA repair 9: 202–209.
-
(2010)
DNA repair
, vol.9
, pp. 202-209
-
-
Gabbai, C.B.1
Marians, K.J.2
-
50
-
-
0242300088
-
Endogenous DNA double-strand breaks: production, fidelity of repair, and induction of cancer
-
Vilenchik MM, Knudson AG, (2003) Endogenous DNA double-strand breaks: production, fidelity of repair, and induction of cancer. Proc Natl Acad Sci U S A 100: 12871–12876.
-
(2003)
Proc Natl Acad Sci U S A
, vol.100
, pp. 12871-12876
-
-
Vilenchik, M.M.1
Knudson, A.G.2
-
51
-
-
34249938016
-
Recombination proteins and rescue of arrested replication forks
-
Michel B, Boubakri H, Baharoglu Z, LeMasson M, Lestini R, (2007) Recombination proteins and rescue of arrested replication forks. DNA repair 6: 967–980.
-
(2007)
DNA repair
, vol.6
, pp. 967-980
-
-
Michel, B.1
Boubakri, H.2
Baharoglu, Z.3
LeMasson, M.4
Lestini, R.5
-
52
-
-
10744233671
-
Repair of and checkpoint response to topoisomerase I-mediated DNA damage
-
Pommier Y, Redon C, Rao VA, Seiler JA, Sordet O, et al. (2003) Repair of and checkpoint response to topoisomerase I-mediated DNA damage. Mutat Res 532: 173–203.
-
(2003)
Mutat Res
, vol.532
, pp. 173-203
-
-
Pommier, Y.1
Redon, C.2
Rao, V.A.3
Seiler, J.A.4
Sordet, O.5
-
53
-
-
36148992972
-
Different genetic requirements for repair of replication-born double-strand breaks by sister-chromatid recombination and break-induced replication
-
Cortes-Ledesma F, Tous C, Aguilera A, (2007) Different genetic requirements for repair of replication-born double-strand breaks by sister-chromatid recombination and break-induced replication. Nucleic Acids Res 35: 6560–6570.
-
(2007)
Nucleic Acids Res
, vol.35
, pp. 6560-6570
-
-
Cortes-Ledesma, F.1
Tous, C.2
Aguilera, A.3
|