-
1
-
-
84856736515
-
Genome sequencing reveals agronomically important loci in rice using MutMap
-
Abe, A., Kosugi, S., Yoshida, K., et al. (2012a) Genome sequencing reveals agronomically important loci in rice using MutMap. Nat. Biotechnol. 30, 174-178.
-
(2012)
Nat. Biotechnol.
, vol.30
, pp. 174-178
-
-
Abe, A.1
Kosugi, S.2
Yoshida, K.3
-
2
-
-
84874145618
-
Ion beam radiation mutagenesis
-
In (Shu, Q.Y. Forster, B.P. and Nakagawa, H. eds). Oxfordshire: CABI
-
Abe, T., Ryuto, H., and, Fukunishi, N., (2012b) Ion beam radiation mutagenesis. In Plant Mutation Breeding and Biotechnology (, Shu, Q.Y., Forster, B.P., and, Nakagawa, H., eds). Oxfordshire: CABI, pp. 99-106.
-
(2012)
Plant Mutation Breeding and Biotechnology
, pp. 99-106
-
-
Abe, T.1
Ryuto, H.2
Fukunishi, N.3
-
3
-
-
0042768158
-
Genome-wide insertional mutagenesis of Arabidopsis thaliana
-
Alonso, J.M., Stepanova, A.N., Leisse, T.J., et al. (2003) Genome-wide insertional mutagenesis of Arabidopsis thaliana. Science, 301, 653-657.
-
(2003)
Science
, vol.301
, pp. 653-657
-
-
Alonso, J.M.1
Stepanova, A.N.2
Leisse, T.J.3
-
4
-
-
79956187736
-
Mechanism of cluster DNA damage repair in response to high-atomic number and energy particles radiation
-
Asaithamby, A., and, Chen, D.J., (2011) Mechanism of cluster DNA damage repair in response to high-atomic number and energy particles radiation. Mutat. Res. 711, 87-99.
-
(2011)
Mutat. Res.
, vol.711
, pp. 87-99
-
-
Asaithamby, A.1
Chen, D.J.2
-
5
-
-
80051671698
-
Next-generation mapping of Arabidopsis genes
-
Austin, R.S., Vidaurre, D., Stamatiou, G., et al. (2011) Next-generation mapping of Arabidopsis genes. Plant J. 67, 715-725.
-
(2011)
Plant J.
, vol.67
, pp. 715-725
-
-
Austin, R.S.1
Vidaurre, D.2
Stamatiou, G.3
-
6
-
-
84863557415
-
Genome-wide analysis of mutations in mutant lineages selected following fast-neutron irradiation mutagenesis of Arabidopsis thaliana
-
Belfield, E.J., Gan, X., Mithani, A., et al. (2012) Genome-wide analysis of mutations in mutant lineages selected following fast-neutron irradiation mutagenesis of Arabidopsis thaliana. Genome Res. 22, 1306-1315.
-
(2012)
Genome Res.
, vol.22
, pp. 1306-1315
-
-
Belfield, E.J.1
Gan, X.2
Mithani, A.3
-
7
-
-
84897462118
-
Microarray-based ultra-high resolution discovery of genomic deletion mutations
-
Belfield, E.J., Brown, C., Gan, X., Jiang, C., Baban, D., Mithani, A., Mott, R., Ragoussis, J., and, Harberd, N.P., (2014) Microarray-based ultra-high resolution discovery of genomic deletion mutations. BMC Genom. 15, 224.
-
(2014)
BMC Genom.
, vol.15
, pp. 224
-
-
Belfield, E.J.1
Brown, C.2
Gan, X.3
Jiang, C.4
Baban, D.5
Mithani, A.6
Mott, R.7
Ragoussis, J.8
Harberd, N.P.9
-
8
-
-
79951691235
-
Perspectives on systematic analyses of gene function in Arabidopsis thaliana: New tools, topics and trends
-
Bolle, C., Schneider, A., and, Leister, D., (2011) Perspectives on systematic analyses of gene function in Arabidopsis thaliana: new tools, topics and trends. Curr. Genomics, 12, 1-14.
-
(2011)
Curr. Genomics
, vol.12
, pp. 1-14
-
-
Bolle, C.1
Schneider, A.2
Leister, D.3
-
9
-
-
84879200642
-
GABI-DUPLO: A collection of double mutants to overcome genetic redundancy in Arabidopsis thaliana
-
Bolle, C., Huep, G., Kleinbölting, N., Haberer, G., Mayer, K., Leister, D., and, Weisshaar, B., (2013) GABI-DUPLO: a collection of double mutants to overcome genetic redundancy in Arabidopsis thaliana. Plant J. 75, 157-171.
-
(2013)
Plant J.
, vol.75
, pp. 157-171
-
-
Bolle, C.1
Huep, G.2
Kleinbölting, N.3
Haberer, G.4
Mayer, K.5
Leister, D.6
Weisshaar, B.7
-
10
-
-
12644268236
-
Analysis of fast neutron-generated mutants at the Arabidopsis thaliana HY4 locus
-
Bruggemann, E., Handwerger, K., Essex, C., and, Storz, G., (1996) Analysis of fast neutron-generated mutants at the Arabidopsis thaliana HY4 locus. Plant J. 10, 755-760.
-
(1996)
Plant J.
, vol.10
, pp. 755-760
-
-
Bruggemann, E.1
Handwerger, K.2
Essex, C.3
Storz, G.4
-
11
-
-
0034700465
-
Asymmetric leaves1 mediates leaf patterning and stem cell function in Arabidopsis
-
Byrne, M.E., Barley, R., Curtis, M., Arroyo, J.M., Dunham, M., Hudson, A., and, Martienssen, R.A., (2000) Asymmetric leaves1 mediates leaf patterning and stem cell function in Arabidopsis. Nature, 408, 967-971.
-
(2000)
Nature
, vol.408
, pp. 967-971
-
-
Byrne, M.E.1
Barley, R.2
Curtis, M.3
Arroyo, J.M.4
Dunham, M.5
Hudson, A.6
Martienssen, R.A.7
-
12
-
-
79957832472
-
Kinetic analysis of DNA double-strand break repair pathways in Arabidopsis
-
Charbonnel, C., Allain, E., Gallego, M.E., and, White, C.I., (2011) Kinetic analysis of DNA double-strand break repair pathways in Arabidopsis. DNA Repair, 10, 611-619.
-
(2011)
DNA Repair
, vol.10
, pp. 611-619
-
-
Charbonnel, C.1
Allain, E.2
Gallego, M.E.3
White, C.I.4
-
13
-
-
69549116107
-
BreakDancer: An algorithm for high-resolution mapping of genomic structural variation
-
Chen, K., Wallis, J.W., McLellan, M.D., et al. (2009) BreakDancer: an algorithm for high-resolution mapping of genomic structural variation. Nat. Methods, 9, 677-681.
-
(2009)
Nat. Methods
, vol.9
, pp. 677-681
-
-
Chen, K.1
Wallis, J.W.2
McLellan, M.D.3
-
14
-
-
84876161358
-
Alternative end-joining mechanisms: A historical perspective
-
Decottignies, A., (2013) Alternative end-joining mechanisms: a historical perspective. Front. Genet. 4, 48.
-
(2013)
Front. Genet.
, vol.4
, pp. 48
-
-
Decottignies, A.1
-
15
-
-
84888626405
-
Modernizing the nonhomologous end-joining repertoire: Alternative and classical NHEJ share the stage
-
Deriano, L., and, Roth, D.B., (2013) Modernizing the nonhomologous end-joining repertoire: alternative and classical NHEJ share the stage. Annu. Rev. Genet. 47, 433-455.
-
(2013)
Annu. Rev. Genet.
, vol.47
, pp. 433-455
-
-
Deriano, L.1
Roth, D.B.2
-
16
-
-
0034612308
-
The nonhomologous end-joining pathway of DNA repair is required for genomic stability and the suppression of translocations
-
Ferguson, D.O., Sekiguchi, J.M., Chang, S., Frank, K.M., Gao, Y., DePinho, R.A., and, Alt, F.W., (2000) The nonhomologous end-joining pathway of DNA repair is required for genomic stability and the suppression of translocations. Proc. Natl Acad. Sci. USA, 97, 6630-6633.
-
(2000)
Proc. Natl Acad. Sci. USA
, vol.97
, pp. 6630-6633
-
-
Ferguson, D.O.1
Sekiguchi, J.M.2
Chang, S.3
Frank, K.M.4
Gao, Y.5
Depinho, R.A.6
Alt, F.W.7
-
17
-
-
84898023508
-
Decoding complex patterns of genomic rearrangement in hepatocellular carcinoma
-
Fernandez-Banet, J., Lee, N.P., Chan, K.T., et al. (2014) Decoding complex patterns of genomic rearrangement in hepatocellular carcinoma. Genomics, 103, 189-203.
-
(2014)
Genomics
, vol.103
, pp. 189-203
-
-
Fernandez-Banet, J.1
Lee, N.P.2
Chan, K.T.3
-
18
-
-
84884202650
-
Track structure based modelling of chromosome aberrations after photon and alpha-particle irradiation
-
Friedland, W., and, Kundrát, P., (2013) Track structure based modelling of chromosome aberrations after photon and alpha-particle irradiation. Mutat. Res. 756, 213-223.
-
(2013)
Mutat. Res.
, vol.756
, pp. 213-223
-
-
Friedland, W.1
Kundrát, P.2
-
19
-
-
84900439412
-
Alternative end-joining pathway(s): Bricolage at DNA breaks
-
Frit, P., Barboule, N., Yuan, Y., Gomez, D., and, Calsou, P., (2014) Alternative end-joining pathway(s): bricolage at DNA breaks. DNA Repair, 17, 81-97.
-
(2014)
DNA Repair
, vol.17
, pp. 81-97
-
-
Frit, P.1
Barboule, N.2
Yuan, Y.3
Gomez, D.4
Calsou, P.5
-
20
-
-
44349188585
-
Formation of clustered DNA damage after high-LET irradiation: A review
-
Hada, M., and, Georgakilas, A.G., (2008) Formation of clustered DNA damage after high-LET irradiation: a review. J. Radiat. Res. 49, 203-210.
-
(2008)
J. Radiat. Res.
, vol.49
, pp. 203-210
-
-
Hada, M.1
Georgakilas, A.G.2
-
21
-
-
84856217896
-
Mutagenic effects of carbon ions near the range end in plants
-
Hase, Y., Yoshihara, R., Nozawa, S., and, Narumi, I., (2012) Mutagenic effects of carbon ions near the range end in plants. Mutat. Res. 731, 41-47.
-
(2012)
Mutat. Res.
, vol.731
, pp. 41-47
-
-
Hase, Y.1
Yoshihara, R.2
Nozawa, S.3
Narumi, I.4
-
22
-
-
84863004800
-
Molecular nature of mutations induced by high-LET irradiation with argon and carbon ions in Arabidopsis thaliana
-
Hirano, T., Kazama, Y., Ohbu, S., Shirakawa, Y., Liu, Y., Kambara, T., Fukunishi, N., and, Abe, T., (2012) Molecular nature of mutations induced by high-LET irradiation with argon and carbon ions in Arabidopsis thaliana. Mutat. Res. 735, 19-31.
-
(2012)
Mutat. Res.
, vol.735
, pp. 19-31
-
-
Hirano, T.1
Kazama, Y.2
Ohbu, S.3
Shirakawa, Y.4
Liu, Y.5
Kambara, T.6
Fukunishi, N.7
Abe, T.8
-
23
-
-
42149150982
-
Heavy-ion beam-induced sterile mutants of verbena (Verbena × hybrida) with an improved flowering habit
-
Kanaya, T., Saito, H., Hayashi, Y., Fukunishi, N., Ryuto, H., Miyazaki, K., Kusumi, T., Abe, T., and, Suzuki, K., (2008) Heavy-ion beam-induced sterile mutants of verbena (Verbena × hybrida) with an improved flowering habit. Plant Biotechnol. 25, 91-96.
-
(2008)
Plant Biotechnol.
, vol.25
, pp. 91-96
-
-
Kanaya, T.1
Saito, H.2
Hayashi, Y.3
Fukunishi, N.4
Ryuto, H.5
Miyazaki, K.6
Kusumi, T.7
Abe, T.8
Suzuki, K.9
-
24
-
-
42149109645
-
LET-dependent effects of heavy-ion beam irradiation in Arabidopsis thaliana
-
Kazama, Y., Saito, H., Yamamoto, Y.Y., Hayashi, Y., Ichida, H., Ryuto, H., Fukunishi, N., and, Abe, T., (2008) LET-dependent effects of heavy-ion beam irradiation in Arabidopsis thaliana. Plant Biotechnol. 25, 113-117.
-
(2008)
Plant Biotechnol.
, vol.25
, pp. 113-117
-
-
Kazama, Y.1
Saito, H.2
Yamamoto, Y.Y.3
Hayashi, Y.4
Ichida, H.5
Ryuto, H.6
Fukunishi, N.7
Abe, T.8
-
25
-
-
81055124148
-
Characterization of highly efficient heavy-ion mutagenesis in Arabidopsis thaliana
-
Kazama, Y., Hirano, T., Saito, H., Liu, Y., Ohbu, S., Hayashi, Y., and, Abe, T., (2011) Characterization of highly efficient heavy-ion mutagenesis in Arabidopsis thaliana. BMC Plant Biol. 11, 161.
-
(2011)
BMC Plant Biol.
, vol.11
, pp. 161
-
-
Kazama, Y.1
Hirano, T.2
Saito, H.3
Liu, Y.4
Ohbu, S.5
Hayashi, Y.6
Abe, T.7
-
26
-
-
84874154009
-
Rapid evaluation of effective linear energy transfer in heavy-ion mutagenesis of Arabidopsis thaliana
-
Kazama, Y., Ma, L., Hirano, T., Ohbu, S., Shirakawa, Y., Hatakeyama, S., Tanaka, S., and, Abe, T., (2012) Rapid evaluation of effective linear energy transfer in heavy-ion mutagenesis of Arabidopsis thaliana. Plant Biotechnol. 29, 441-445.
-
(2012)
Plant Biotechnol.
, vol.29
, pp. 441-445
-
-
Kazama, Y.1
Ma, L.2
Hirano, T.3
Ohbu, S.4
Shirakawa, Y.5
Hatakeyama, S.6
Tanaka, S.7
Abe, T.8
-
27
-
-
84884341750
-
Effect of high-LET Fe-ion beam irradiation on mutation induction in Arabidopsis thaliana
-
Kazama, Y., Hirano, T., Nishihara, K., Ohbu, S., Shirakawa, Y., and, Abe, T., (2013) Effect of high-LET Fe-ion beam irradiation on mutation induction in Arabidopsis thaliana. Genes Genet. Syst. 88, 189-197.
-
(2013)
Genes Genet. Syst.
, vol.88
, pp. 189-197
-
-
Kazama, Y.1
Hirano, T.2
Nishihara, K.3
Ohbu, S.4
Shirakawa, Y.5
Abe, T.6
-
28
-
-
27744585828
-
Arabidopsis CYP85A2, a cytochrome P450, mediates the Baeyer-Villiger oxidation of castasterone to brassinolide in brassinosteroid biosynthesis
-
Kim, T.W., Hwang, J.Y., Kim, Y.S., Joo, S.H., Chang, S.C., Lee, J.S., Takatsuto, S., and, Kim, S.K., (2005) Arabidopsis CYP85A2, a cytochrome P450, mediates the Baeyer-Villiger oxidation of castasterone to brassinolide in brassinosteroid biosynthesis. Plant Cell, 17, 2397-2412.
-
(2005)
Plant Cell
, vol.17
, pp. 2397-2412
-
-
Kim, T.W.1
Hwang, J.Y.2
Kim, Y.S.3
Joo, S.H.4
Chang, S.C.5
Lee, J.S.6
Takatsuto, S.7
Kim, S.K.8
-
29
-
-
58449093788
-
Mutant resources in rice for functional genomics of the grasses
-
Krishnan, A., Guiderdoni, E., An, G., et al. (2009) Mutant resources in rice for functional genomics of the grasses. Plant Physiol. 149, 165-170.
-
(2009)
Plant Physiol.
, vol.149
, pp. 165-170
-
-
Krishnan, A.1
Guiderdoni, E.2
An, G.3
-
30
-
-
84894473902
-
Chromatin structure and radiation-induced DNA damage: From structural biology to radiobiology
-
Lavelle, C., and, Foray, N., (2014) Chromatin structure and radiation-induced DNA damage: from structural biology to radiobiology. Int. J. Biochem. Cell Biol. 49, 84-97.
-
(2014)
Int. J. Biochem. Cell Biol.
, vol.49
, pp. 84-97
-
-
Lavelle, C.1
Foray, N.2
-
31
-
-
67649884743
-
Fast and accurate short read alignment with Burrows-Wheeler transform
-
Li, H., and, Durbin, R., (2009) Fast and accurate short read alignment with Burrows-Wheeler transform. Bioinformatics, 25, 1754-1760.
-
(2009)
Bioinformatics
, vol.25
, pp. 1754-1760
-
-
Li, H.1
Durbin, R.2
-
32
-
-
68549104404
-
The sequence alignment/Map format and SAMtools
-
1000 Genome Project Data Processing Subgroup
-
Li, H., Handsaker, B., Wysoker, A., Fennell, T., Ruan, J., Homer, N., Marth, G., Abecasis, G., Durbin, R., and 1000 Genome Project Data Processing Subgroup (2009) The sequence alignment/Map format and SAMtools. Bioinformatics, 25, 2078-2079.
-
(2009)
Bioinformatics
, vol.25
, pp. 2078-2079
-
-
Li, H.1
Handsaker, B.2
Wysoker, A.3
Fennell, T.4
Ruan, J.5
Homer, N.6
Marth, G.7
Abecasis, G.8
Durbin, R.9
-
33
-
-
33645854065
-
Flower pigment mutations induced by heavy ion beam irradiation in an inter specific hybrid of Torenia
-
Miyazaki, K., Suzuki, K., Iwaki, K., Kusumi, T., Abe, T., Yoshida, S., and, Fukui, H., (2006) Flower pigment mutations induced by heavy ion beam irradiation in an inter specific hybrid of Torenia. Plant Biotechnol. 23, 163-167.
-
(2006)
Plant Biotechnol.
, vol.23
, pp. 163-167
-
-
Miyazaki, K.1
Suzuki, K.2
Iwaki, K.3
Kusumi, T.4
Abe, T.5
Yoshida, S.6
Fukui, H.7
-
34
-
-
34948845126
-
Knockout of glutelin genes which form a tandem array with a high level of homology in rice by gamma irradiation
-
Morita, R., Kusaba, M., Iida, S., Nishio, T., and, Nishimura, M., (2007) Knockout of glutelin genes which form a tandem array with a high level of homology in rice by gamma irradiation. Genes Genet. Syst. 82, 321-327.
-
(2007)
Genes Genet. Syst.
, vol.82
, pp. 321-327
-
-
Morita, R.1
Kusaba, M.2
Iida, S.3
Nishio, T.4
Nishimura, M.5
-
35
-
-
76749092657
-
Molecular characterization of mutations induced by gamma irradiation in rice
-
Morita, R., Kusaba, M., Iida, S., Yamaguchi, H., Nishio, T., and, Nishimura, M., (2009) Molecular characterization of mutations induced by gamma irradiation in rice. Genes Genet. Syst. 84, 361-370.
-
(2009)
Genes Genet. Syst.
, vol.84
, pp. 361-370
-
-
Morita, R.1
Kusaba, M.2
Iida, S.3
Yamaguchi, H.4
Nishio, T.5
Nishimura, M.6
-
36
-
-
57549116153
-
AtMap1: A DNA microarray for genomic deletion mapping in Arabidopsis thaliana
-
Nagano, A.J., Fukazawa, M., Hayashi, M., Ikeuchi, M., Tsukaya, H., Nishimura, M., and, Hara-Nishimura, I., (2008) AtMap1: a DNA microarray for genomic deletion mapping in Arabidopsis thaliana. Plant J. 56, 1058-1065.
-
(2008)
Plant J.
, vol.56
, pp. 1058-1065
-
-
Nagano, A.J.1
Fukazawa, M.2
Hayashi, M.3
Ikeuchi, M.4
Tsukaya, H.5
Nishimura, M.6
Hara-Nishimura, I.7
-
37
-
-
15544388254
-
Transmissible and nontransmissible mutations induced by irradiating Arabidopsis thaliana pollen with γ-rays and carbon ions
-
Naito, K., Kusaba, M., Shikazono, N., Takano, T., Tanaka, A., Tanisaka, T., and, Nishimura, M., (2005) Transmissible and nontransmissible mutations induced by irradiating Arabidopsis thaliana pollen with γ-rays and carbon ions. Genetics, 169, 881-889.
-
(2005)
Genetics
, vol.169
, pp. 881-889
-
-
Naito, K.1
Kusaba, M.2
Shikazono, N.3
Takano, T.4
Tanaka, A.5
Tanisaka, T.6
Nishimura, M.7
-
38
-
-
70349221690
-
A phosphofructokinase B-type carbohydrate kinase family protein, NARA5, for massive expressions of plastid-encoded photosynthetic genes in Arabidopsis
-
Ogawa, T., Nishimura, K., Aoki, T., Takase, H., Tomizawa, K., Ashida, H., and, Yokota, A., (2009) A phosphofructokinase B-type carbohydrate kinase family protein, NARA5, for massive expressions of plastid-encoded photosynthetic genes in Arabidopsis. Plant Physiol. 151, 114-128.
-
(2009)
Plant Physiol.
, vol.151
, pp. 114-128
-
-
Ogawa, T.1
Nishimura, K.2
Aoki, T.3
Takase, H.4
Tomizawa, K.5
Ashida, H.6
Yokota, A.7
-
39
-
-
84900846199
-
A re-sequencing based assessment of genomic heterogeneity and fast neutron-induced deletions in a common bean cultivar
-
O'Rourke, J.A., Iniguez, L.P., Bucciarelli, B., et al. (2013) A re-sequencing based assessment of genomic heterogeneity and fast neutron-induced deletions in a common bean cultivar. Front. Plant Sci. 4, 210.
-
(2013)
Front. Plant Sci.
, vol.4
, pp. 210
-
-
O'Rourke, J.A.1
Iniguez, L.P.2
Bucciarelli, B.3
-
40
-
-
0037314536
-
Repair of radiation-induced DNA double-strand breaks is dependent upon radiation quality and the structural complexity of double-strand breaks
-
Pastwa, E., Neumann, R.D., Mezhevaya, K., and, Winters, T.A., (2003) Repair of radiation-induced DNA double-strand breaks is dependent upon radiation quality and the structural complexity of double-strand breaks. Radiat. Res. 159, 251-261.
-
(2003)
Radiat. Res.
, vol.159
, pp. 251-261
-
-
Pastwa, E.1
Neumann, R.D.2
Mezhevaya, K.3
Winters, T.A.4
-
41
-
-
84887015270
-
Hidden genetic nature of epigenetic natural variation in plants
-
Pecinka, A., Abdelsamad, A., and, Vu, G.T.H., (2013) Hidden genetic nature of epigenetic natural variation in plants. Trends Plant Sci. 18, 625-632.
-
(2013)
Trends Plant Sci.
, vol.18
, pp. 625-632
-
-
Pecinka, A.1
Abdelsamad, A.2
Vu, G.T.H.3
-
42
-
-
33749357831
-
Striking similarities in the genomic distribution of tandemly arrayed genes in Arabidopsis and rice
-
Rizzon, C., Ponger, L., and, Gaut, B.S., (2006) Striking similarities in the genomic distribution of tandemly arrayed genes in Arabidopsis and rice. PLoS Comput. Biol. 2, e115.
-
(2006)
PLoS Comput. Biol.
, vol.2
, pp. e115
-
-
Rizzon, C.1
Ponger, L.2
Gaut, B.S.3
-
43
-
-
78651271733
-
Integrative genomics viewer
-
Robinson, J.T., Thorvaldsdõttir, H., Winckler, W., Guttman, M., Lander, E.S., Getz, G., and, Mesirov, J.P., (2011) Integrative genomics viewer. Nat. Biotechnol. 29, 24-26.
-
(2011)
Nat. Biotechnol.
, vol.29
, pp. 24-26
-
-
Robinson, J.T.1
Thorvaldsdõttir, H.2
Winckler, W.3
Guttman, M.4
Lander, E.S.5
Getz, G.6
Mesirov, J.P.7
-
44
-
-
42149132090
-
Heavy-ion beam irradiation facility for biological samples in RIKEN
-
Ryuto, H., Fukunishi, N., Hayashi, Y., Ichida, H., Abe, T., Kase, M., and, Yano, Y., (2008) Heavy-ion beam irradiation facility for biological samples in RIKEN. Plant Biotechnol. 25, 119-122.
-
(2008)
Plant Biotechnol.
, vol.25
, pp. 119-122
-
-
Ryuto, H.1
Fukunishi, N.2
Hayashi, Y.3
Ichida, H.4
Abe, T.5
Kase, M.6
Yano, Y.7
-
45
-
-
79956225907
-
Clustered DNA lesion repair in eukaryotes: Relevance to mutagenesis and cell survival
-
Sage, E., and, Harrison, L., (2011) Clustered DNA lesion repair in eukaryotes: relevance to mutagenesis and cell survival. Mutat. Res. 711, 123-133.
-
(2011)
Mutat. Res.
, vol.711
, pp. 123-133
-
-
Sage, E.1
Harrison, L.2
-
46
-
-
33745147174
-
Mutant selection from progeny of gamma-ray-irradiated rice by DNA heteroduplex cleavage using Brassica petiole extract
-
Sato, Y., Shirasawa, K., Takahashi, Y., Nishimura, M., and, Nishio, T., (2006) Mutant selection from progeny of gamma-ray-irradiated rice by DNA heteroduplex cleavage using Brassica petiole extract. Breed. Sci. 56, 179-183.
-
(2006)
Breed. Sci.
, vol.56
, pp. 179-183
-
-
Sato, Y.1
Shirasawa, K.2
Takahashi, Y.3
Nishimura, M.4
Nishio, T.5
-
47
-
-
68349086946
-
SHOREmap: Simultaneous mapping and mutation identification by deep sequencing
-
Schneeberger, K., Ossowski, S., Lanz, C., Juul, T., Petersen, A.H., Nielsen, K.L., Jørgensen, J.E., Weigel, D., and, Andersen, S.U., (2009) SHOREmap: simultaneous mapping and mutation identification by deep sequencing. Nat. Methods, 6, 550-551.
-
(2009)
Nat. Methods
, vol.6
, pp. 550-551
-
-
Schneeberger, K.1
Ossowski, S.2
Lanz, C.3
Juul, T.4
Petersen, A.H.5
Nielsen, K.L.6
Jørgensen, J.E.7
Weigel, D.8
Andersen, S.U.9
-
48
-
-
14544293245
-
Analysis of mutations induced by carbon ions in Arabidopsis thaliana
-
Shikazono, N., Suzuki, C., Kitamura, S., Watanabe, H., Tano, S., and, Tanaka, A., (2005) Analysis of mutations induced by carbon ions in Arabidopsis thaliana. J. Exp. Bot. 56, 587-596.
-
(2005)
J. Exp. Bot.
, vol.56
, pp. 587-596
-
-
Shikazono, N.1
Suzuki, C.2
Kitamura, S.3
Watanabe, H.4
Tano, S.5
Tanaka, A.6
-
49
-
-
77950462986
-
Alternative end-joining is suppressed by the canonical NHEJ component Xrcc4-ligase IV during chromosomal translocation formation
-
Simsek, D., and, Jasin, M., (2010) Alternative end-joining is suppressed by the canonical NHEJ component Xrcc4-ligase IV during chromosomal translocation formation. Nat. Struct. Mol. Biol. 17, 410-416.
-
(2010)
Nat. Struct. Mol. Biol.
, vol.17
, pp. 410-416
-
-
Simsek, D.1
Jasin, M.2
-
50
-
-
79959814259
-
DNA Ligase III promotes alternative nonhomologous end-joining during chromosomal translocation formation
-
Simsek, D., Brunet, E., Wong, S.Y.-W., et al. (2011) DNA Ligase III promotes alternative nonhomologous end-joining during chromosomal translocation formation. PLoS Genet. 7, e1002080.
-
(2011)
PLoS Genet.
, vol.7
, pp. e1002080
-
-
Simsek, D.1
Brunet, E.2
Wong, S.Y.-W.3
-
51
-
-
84903167737
-
Requirement for Parp-1 and DNA ligases 1 or 3 but not of Xrcc1 in chromosomal translocation formation by backup end joining
-
Soni, A., Siemann, M., Grabos, M., Murmann, T., Pantelias, G.E., and, Iliakis, G., (2014) Requirement for Parp-1 and DNA ligases 1 or 3 but not of Xrcc1 in chromosomal translocation formation by backup end joining. Nucleic Acids Res. 42, 6380-6392.
-
(2014)
Nucleic Acids Res.
, vol.42
, pp. 6380-6392
-
-
Soni, A.1
Siemann, M.2
Grabos, M.3
Murmann, T.4
Pantelias, G.E.5
Iliakis, G.6
-
52
-
-
39049186193
-
The PCC assay can be used to predict radiosensitivity in biopsy cultures irradiated with different types of radiation
-
Suzuki, M., Tsuruoka, C., Nakano, T., Ohno, T., Furusawa, Y., and, Okayasu, R., (2006) The PCC assay can be used to predict radiosensitivity in biopsy cultures irradiated with different types of radiation. Oncol. Rep. 16, 1293-1299.
-
(2006)
Oncol. Rep.
, vol.16
, pp. 1293-1299
-
-
Suzuki, M.1
Tsuruoka, C.2
Nakano, T.3
Ohno, T.4
Furusawa, Y.5
Okayasu, R.6
-
53
-
-
77954023036
-
Studies on biological effects of ion beams on lethality, molecular nature of mutation, mutation rate, and spectrum of mutation phenotype for mutation breeding in higher plants
-
Tanaka, A., Shikazono, N., and, Hase, Y., (2010) Studies on biological effects of ion beams on lethality, molecular nature of mutation, mutation rate, and spectrum of mutation phenotype for mutation breeding in higher plants. J. Radiat. Res. 51, 223-233.
-
(2010)
J. Radiat. Res.
, vol.51
, pp. 223-233
-
-
Tanaka, A.1
Shikazono, N.2
Hase, Y.3
-
54
-
-
0034649566
-
Analysis of the genome sequence of the flowering plant Arabidopsis thaliana
-
The Arabidopsis Genome Initiative
-
The Arabidopsis Genome Initiative. (2000) Analysis of the genome sequence of the flowering plant Arabidopsis thaliana. Nature, 408, 796-815.
-
(2000)
Nature
, vol.408
, pp. 796-815
-
-
-
55
-
-
49249100373
-
The difference in LET and ion species dependence for induction of initially measured and non-rejoined chromatin breaks in normal human fibroblasts
-
Tsuruoka, C., Suzuki, M., Hande, M.P., Furusawa, Y., Anzai, K., and, Okayasu, R., (2008) The difference in LET and ion species dependence for induction of initially measured and non-rejoined chromatin breaks in normal human fibroblasts. Radiat. Res. 170, 163-171.
-
(2008)
Radiat. Res.
, vol.170
, pp. 163-171
-
-
Tsuruoka, C.1
Suzuki, M.2
Hande, M.P.3
Furusawa, Y.4
Anzai, K.5
Okayasu, R.6
-
56
-
-
79953862774
-
Identification of EMS-induced causal mutations in a non-reference Arabidopsis thaliana accession by whole genome sequencing
-
Uchida, N., Sakamoto, T., Kurata, T., and, Tasaka, M., (2011) Identification of EMS-induced causal mutations in a non-reference Arabidopsis thaliana accession by whole genome sequencing. Plant Cell Physiol. 52, 716-722.
-
(2011)
Plant Cell Physiol.
, vol.52
, pp. 716-722
-
-
Uchida, N.1
Sakamoto, T.2
Kurata, T.3
Tasaka, M.4
-
57
-
-
42249098075
-
The Ku-dependent non-homologous end-joining but not other repair pathway is inhibited by high linear energy transfer ionizing radiation
-
Wang, H., Wang, X., Zhang, P., and, Wang, Y., (2008) The Ku-dependent non-homologous end-joining but not other repair pathway is inhibited by high linear energy transfer ionizing radiation. DNA Repair, 7, 725-733.
-
(2008)
DNA Repair
, vol.7
, pp. 725-733
-
-
Wang, H.1
Wang, X.2
Zhang, P.3
Wang, Y.4
-
58
-
-
77953716710
-
Characteristics of DNA-binding proteins determine the biological sensitivity to high-linear energy transfer radiation
-
Wang, H., Zhang, X., Wang, P., Yu, X., Essers, J., Chen, D., Kanaar, R., Takeda, S., and, Wang, Y., (2010) Characteristics of DNA-binding proteins determine the biological sensitivity to high-linear energy transfer radiation. Nucleic Acids Res., 38, 3245-3251.
-
(2010)
Nucleic Acids Res.
, vol.38
, pp. 3245-3251
-
-
Wang, H.1
Zhang, X.2
Wang, P.3
Yu, X.4
Essers, J.5
Chen, D.6
Kanaar, R.7
Takeda, S.8
Wang, Y.9
-
59
-
-
34547589577
-
Formation of NHEJ-derived reciprocal chromosomal translocations does not require Ku70
-
Weinstock, D.M., Brunet, E., and, Jasin, M., (2007) Formation of NHEJ-derived reciprocal chromosomal translocations does not require Ku70. Nat. Cell Biol. 9, 978-981.
-
(2007)
Nat. Cell Biol.
, vol.9
, pp. 978-981
-
-
Weinstock, D.M.1
Brunet, E.2
Jasin, M.3
-
60
-
-
70350694443
-
Pindel: A pattern growth approach to detect break points of large deletions and medium sized insertions from paired-end short reads
-
Ye, K., Schulz, M.H., Long, Q., Apweiler, R., and, Ning, Z., (2009) Pindel: a pattern growth approach to detect break points of large deletions and medium sized insertions from paired-end short reads. Bioinformatics, 25, 2865-2871.
-
(2009)
Bioinformatics
, vol.25
, pp. 2865-2871
-
-
Ye, K.1
Schulz, M.H.2
Long, Q.3
Apweiler, R.4
Ning, Z.5
-
61
-
-
79960559334
-
Detection of copy number variations in rice by using array-based comparative genomic hybridization
-
Yu, P., Wang, C., Xu, Q., Feng, Y., Yuan, X., Yu, H., Wang, Y., Tang, S., and, Wei, X., (2011) Detection of copy number variations in rice by using array-based comparative genomic hybridization. BMC Genom. 12, 372.
-
(2011)
BMC Genom.
, vol.12
, pp. 372
-
-
Yu, P.1
Wang, C.2
Xu, Q.3
Feng, Y.4
Yuan, X.5
Yu, H.6
Wang, Y.7
Tang, S.8
Wei, X.9
-
62
-
-
0037188898
-
Unrepaired DNA breaks in p53-deficient cells lead to oncogenic gene amplification subsequent to translocations
-
Zhu, C., Mills, K.D., Ferguson, D.O., Lee, C., Manis, J., Fleming, J., Gao, Y., Morton, C.C., and, Alt, F.W., (2002) Unrepaired DNA breaks in p53-deficient cells lead to oncogenic gene amplification subsequent to translocations. Cell, 109, 811-821.
-
(2002)
Cell
, vol.109
, pp. 811-821
-
-
Zhu, C.1
Mills, K.D.2
Ferguson, D.O.3
Lee, C.4
Manis, J.5
Fleming, J.6
Gao, Y.7
Morton, C.C.8
Alt, F.W.9
|