-
1
-
-
0036787862
-
RNA polymerase II elongation factors of Saccharomyces cerevisiae: a targeted proteomics approach
-
Krogan NJ, Kim M, Ahn SH, Zhong G, Kobor MS, et al. (2002) RNA polymerase II elongation factors of Saccharomyces cerevisiae: a targeted proteomics approach. Mol Cell Biol 22: 6979–6992.
-
(2002)
Mol Cell Biol
, vol.22
, pp. 6979-6992
-
-
Krogan, N.J.1
Kim, M.2
Ahn, S.H.3
Zhong, G.4
Kobor, M.S.5
-
2
-
-
0032971711
-
Elongator, a multisubunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation
-
Otero G, Fellows J, Li Y, de Bizemont T, Dirac AM, et al. (1999) Elongator, a multisubunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation. Mol Cell 3: 109–118.
-
(1999)
Mol Cell
, vol.3
, pp. 109-118
-
-
Otero, G.1
Fellows, J.2
Li, Y.3
de Bizemont, T.4
Dirac, A.M.5
-
3
-
-
59249093238
-
Loss of mouse Ikbkap, a subunit of elongator, leads to transcriptional deficits and embryonic lethality that can be rescued by human IKBKAP
-
Chen YT, Hims MM, Shetty RS, Mull J, Liu L, et al. (2009) Loss of mouse Ikbkap, a subunit of elongator, leads to transcriptional deficits and embryonic lethality that can be rescued by human IKBKAP. Mol Cell Biol 29: 736–744.
-
(2009)
Mol Cell Biol
, vol.29
, pp. 736-744
-
-
Chen, Y.T.1
Hims, M.M.2
Shetty, R.S.3
Mull, J.4
Liu, L.5
-
4
-
-
58749097964
-
Variants of the elongator protein 3 (ELP3) gene are associated with motor neuron degeneration
-
Simpson CL, Lemmens R, Miskiewicz K, Broom WJ, Hansen VK, et al. (2009) Variants of the elongator protein 3 (ELP3) gene are associated with motor neuron degeneration. Hum Mol Genet 18: 472–481.
-
(2009)
Hum Mol Genet
, vol.18
, pp. 472-481
-
-
Simpson, C.L.1
Lemmens, R.2
Miskiewicz, K.3
Broom, W.J.4
Hansen, V.K.5
-
5
-
-
69249246953
-
Centrotemporal sharp wave EEG trait in rolandic epilepsy maps to Elongator Protein Complex 4 (ELP4)
-
Strug LJ, Clarke T, Chiang T, Chien M, Baskurt Z, et al. (2009) Centrotemporal sharp wave EEG trait in rolandic epilepsy maps to Elongator Protein Complex 4 (ELP4). Eur J Hum Genet 17: 1171–1181.
-
(2009)
Eur J Hum Genet
, vol.17
, pp. 1171-1181
-
-
Strug, L.J.1
Clarke, T.2
Chiang, T.3
Chien, M.4
Baskurt, Z.5
-
6
-
-
68249089400
-
Defects in tRNA modification associated with neurological and developmental dysfunctions in Caenorhabditis elegans elongator mutants
-
Chen C, Tuck S, Bystrom AS, (2009) Defects in tRNA modification associated with neurological and developmental dysfunctions in Caenorhabditis elegans elongator mutants. PLoS Genet 5: e1000561.
-
(2009)
PLoS Genet
, vol.5
, pp. e1000561
-
-
Chen, C.1
Tuck, S.2
Bystrom, A.S.3
-
7
-
-
76749123484
-
The Caenorhabditis elegans Elongator complex regulates neuronal alpha-tubulin acetylation
-
Solinger JA, Paolinelli R, Klöss H, Scorza FB, Marchesi S, et al. (2010) The Caenorhabditis elegans Elongator complex regulates neuronal alpha-tubulin acetylation. PLoS Genet 6: e1000820.
-
(2010)
PLoS Genet
, vol.6
, pp. e1000820
-
-
Solinger, J.A.1
Paolinelli, R.2
Klöss, H.3
Scorza, F.B.4
Marchesi, S.5
-
8
-
-
21144446261
-
The elongata mutants identify a functional Elongator complex in plants with a role in cell proliferation during organ growth
-
Nelissen H, Fleury D, Bruno L, Robles P, De Veylder L, et al. (2005) The elongata mutants identify a functional Elongator complex in plants with a role in cell proliferation during organ growth. Proc Natl Acad Sci USA 102: 7754–7759.
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, pp. 7754-7759
-
-
Nelissen, H.1
Fleury, D.2
Bruno, L.3
Robles, P.4
De Veylder, L.5
-
9
-
-
73449139095
-
Elongator - an emerging role in neurological disorders
-
Nguyen L, Humbert S, Saudou F, Chariot A, (2010) Elongator - an emerging role in neurological disorders. Trends Mol Med 16: 1–6.
-
(2010)
Trends Mol Med
, vol.16
, pp. 1-6
-
-
Nguyen, L.1
Humbert, S.2
Saudou, F.3
Chariot, A.4
-
11
-
-
0033166761
-
A novel histone acetyltransferase is an integral subunit of elongating RNA polymerase II holoenzyme
-
Wittschieben BO, Otero G, de Bizemont T, Fellows J, Erdjument-Bromage H, et al. (1999) A novel histone acetyltransferase is an integral subunit of elongating RNA polymerase II holoenzyme. Mol Cell 4: 123–128.
-
(1999)
Mol Cell
, vol.4
, pp. 123-128
-
-
Wittschieben, B.O.1
Otero, G.2
de Bizemont, T.3
Fellows, J.4
Erdjument-Bromage, H.5
-
12
-
-
0037133562
-
Elongator is a histone H3 and H4 acetyltransferase important for normal histone acetylation levels in vivo
-
Winkler GS, Kristjuhan A, Erdjument-Bromage H, Tempst P, Svejstrup JQ, (2002) Elongator is a histone H3 and H4 acetyltransferase important for normal histone acetylation levels in vivo. Proc Natl Acad Sci USA 99: 3517–3522.
-
(2002)
Proc Natl Acad Sci USA
, vol.99
, pp. 3517-3522
-
-
Winkler, G.S.1
Kristjuhan, A.2
Erdjument-Bromage, H.3
Tempst, P.4
Svejstrup, J.Q.5
-
13
-
-
59349089711
-
Elongator controls the migration and differentiation of cortical neurons through acetylation of alpha-Tubulin
-
Creppe C, Malinouskaya L, Volvert ML, Gillard M, Close P, et al. (2009) Elongator controls the migration and differentiation of cortical neurons through acetylation of alpha-Tubulin. Cell 136: 551–564.
-
(2009)
Cell
, vol.136
, pp. 551-564
-
-
Creppe, C.1
Malinouskaya, L.2
Volvert, M.L.3
Gillard, M.4
Close, P.5
-
14
-
-
83355177262
-
ELP3 controls active zone morphology by acetylating the ELKS family member Bruchpilot
-
Miskiewicz K, Jose LE, Bento-Abreu A, Fislage M, Taes I, et al. (2011) ELP3 controls active zone morphology by acetylating the ELKS family member Bruchpilot. Neuron 72: 776–788.
-
(2011)
Neuron
, vol.72
, pp. 776-788
-
-
Miskiewicz, K.1
Jose, L.E.2
Bento-Abreu, A.3
Fislage, M.4
Taes, I.5
-
15
-
-
75749142980
-
A role for the elongator complex in zygotic paternal genome demethylation
-
Okada Y, Yamagata K, Hong K, Wakayama T, Zhang Y, (2010) A role for the elongator complex in zygotic paternal genome demethylation. Nature 463: 554–558.
-
(2010)
Nature
, vol.463
, pp. 554-558
-
-
Okada, Y.1
Yamagata, K.2
Hong, K.3
Wakayama, T.4
Zhang, Y.5
-
16
-
-
0035901529
-
Saccharomyces cerevisiae Elongator mutations confer resistance to the Kluyveromyces lactis zymocin
-
Frohloff F, Fichtner L, Jablonowski D, Breunig KD, Schaffrath R, (2001) Saccharomyces cerevisiae Elongator mutations confer resistance to the Kluyveromyces lactis zymocin. EMBO J 20: 1993–2003.
-
(2001)
EMBO J
, vol.20
, pp. 1993-2003
-
-
Frohloff, F.1
Fichtner, L.2
Jablonowski, D.3
Breunig, K.D.4
Schaffrath, R.5
-
17
-
-
73349133725
-
The Elongator complex interacts with PCNA and modulates transcriptional silencing and sensitivity to DNA damage agents
-
Li Q, Fazly AM, Zhou H, Huang S, Zhang Z, et al. (2009) The Elongator complex interacts with PCNA and modulates transcriptional silencing and sensitivity to DNA damage agents. PLoS Genet 5: e1000684.
-
(2009)
PLoS Genet
, vol.5
, pp. e1000684
-
-
Li, Q.1
Fazly, A.M.2
Zhou, H.3
Huang, S.4
Zhang, Z.5
-
18
-
-
37749009135
-
Zymocin, a composite chitinase and tRNase killer toxin from yeast
-
Jablonowski D, Schaffrath R, (2007) Zymocin, a composite chitinase and tRNase killer toxin from yeast. Biochem Soc Trans 35: 1533–1537.
-
(2007)
Biochem Soc Trans
, vol.35
, pp. 1533-1537
-
-
Jablonowski, D.1
Schaffrath, R.2
-
19
-
-
15244355534
-
Elp1p, the yeast homolog of the FD disease syndrome protein, negatively regulates exocytosis independently of transcriptional elongation
-
Rahl PB, Chen CZ, Collins RN, (2005) Elp1p, the yeast homolog of the FD disease syndrome protein, negatively regulates exocytosis independently of transcriptional elongation. Mol Cell 17: 841–853.
-
(2005)
Mol Cell
, vol.17
, pp. 841-853
-
-
Rahl, P.B.1
Chen, C.Z.2
Collins, R.N.3
-
20
-
-
15444371415
-
An early step in wobble uridine tRNA modification requires the Elongator complex
-
Huang B, Johansson MJ, Bystrom AS, (2005) An early step in wobble uridine tRNA modification requires the Elongator complex. RNA 11: 424–436.
-
(2005)
RNA
, vol.11
, pp. 424-436
-
-
Huang, B.1
Johansson, M.J.2
Bystrom, A.S.3
-
21
-
-
77952791647
-
Elongator function in tRNA wobble uridine modification is conserved between yeast and plants
-
Mehlgarten C, Jablonowski D, Wrackmeyer U, Tschitschmann S, Sondermann D, et al. (2010) Elongator function in tRNA wobble uridine modification is conserved between yeast and plants. Mol Microbiol 76: 1082–1094.
-
(2010)
Mol Microbiol
, vol.76
, pp. 1082-1094
-
-
Mehlgarten, C.1
Jablonowski, D.2
Wrackmeyer, U.3
Tschitschmann, S.4
Sondermann, D.5
-
22
-
-
84878485873
-
Ikbkap/Elp1 Deficiency Causes Male Infertility by Disrupting Meiotic Progression
-
Lin F-J, Shen L, Jang C-W, Falnes PØ, Zhang Y, (2013) Ikbkap/Elp1 Deficiency Causes Male Infertility by Disrupting Meiotic Progression. PLoS Genet 9: e1003516.
-
(2013)
PLoS Genet
, vol.9
, pp. e1003516
-
-
Lin, F.-J.1
Shen, L.2
Jang, C.-W.3
Falnes, P.Ø.4
Zhang, Y.5
-
23
-
-
27144474752
-
The Kluyveromyces lactis gamma-toxin targets tRNA anticodons
-
Lu J, Huang B, Esberg A, Johansson MJ, Bystrom AS, (2005) The Kluyveromyces lactis gamma-toxin targets tRNA anticodons. RNA 11: 1648–1654.
-
(2005)
RNA
, vol.11
, pp. 1648-1654
-
-
Lu, J.1
Huang, B.2
Esberg, A.3
Johansson, M.J.4
Bystrom, A.S.5
-
24
-
-
33645064276
-
Glu wobble uridine methylation by Trm9 identifies Elongator's key role for zymocin-induced cell death in yeast
-
Jablonowski D, Zink S, Mehlgarten C, Daum G, Schaffrath R, (2006) tRNAGlu wobble uridine methylation by Trm9 identifies Elongator's key role for zymocin-induced cell death in yeast. Mol Microbiol 59: 677–688.
-
(2006)
Mol Microbiol
, vol.59
, pp. 677-688
-
-
Jablonowski, D.1
Zink, S.2
Mehlgarten, C.3
Daum, G.4
Schaffrath, R.5
-
25
-
-
34447518814
-
2U) in lysyl-tRNA is required for viability in yeast
-
Bjork GR, Huang B, Persson OP, Bystrom AS, (2007) A conserved modified wobble nucleoside (mcm5s2U) in lysyl-tRNA is required for viability in yeast. RNA 13: 1245–1255.
-
(2007)
RNA
, vol.13
, pp. 1245-1255
-
-
Bjork, G.R.1
Huang, B.2
Persson, O.P.3
Bystrom, A.S.4
-
26
-
-
46449083572
-
Bringing order to translation: the contributions of transfer RNA anticodon-domain modifications
-
Agris PF, (2008) Bringing order to translation: the contributions of transfer RNA anticodon-domain modifications. EMBO Rep 9: 629–635.
-
(2008)
EMBO Rep
, vol.9
, pp. 629-635
-
-
Agris, P.F.1
-
27
-
-
43249104840
-
Eukaryotic wobble uridine modifications promote a functionally redundant decoding system
-
Johansson MJ, Esberg A, Huang B, Bjork GR, Bystrom AS, (2008) Eukaryotic wobble uridine modifications promote a functionally redundant decoding system. Mol Cell Biol 28: 3301–3312.
-
(2008)
Mol Cell Biol
, vol.28
, pp. 3301-3312
-
-
Johansson, M.J.1
Esberg, A.2
Huang, B.3
Bjork, G.R.4
Bystrom, A.S.5
-
28
-
-
33749078546
-
Elevated levels of two tRNA species bypass the requirement for elongator complex in transcription and exocytosis
-
Esberg A, Huang B, Johansson MJ, Bystrom AS, (2006) Elevated levels of two tRNA species bypass the requirement for elongator complex in transcription and exocytosis. Mol Cell 24: 139–148.
-
(2006)
Mol Cell
, vol.24
, pp. 139-148
-
-
Esberg, A.1
Huang, B.2
Johansson, M.J.3
Bystrom, A.S.4
-
29
-
-
80053461006
-
Elongator Complex Influences Telomeric Gene Silencing and DNA Damage Response by Its Role in Wobble Uridine tRNA Modification
-
Chen C, Huang B, Eliasson M, Ryden P, Bystrom AS, (2011) Elongator Complex Influences Telomeric Gene Silencing and DNA Damage Response by Its Role in Wobble Uridine tRNA Modification. PLoS Genet 7: e1002258.
-
(2011)
PLoS Genet
, vol.7
, pp. e1002258
-
-
Chen, C.1
Huang, B.2
Eliasson, M.3
Ryden, P.4
Bystrom, A.S.5
-
30
-
-
84880672169
-
tRNA tKUUU, tQUUG, and tEUUC wobble position modifications fine-tune protein translation by promoting ribosome A-site binding
-
Rezgui VA, Tyagi K, Ranjan N, Konevega AL, Mittelstaet J, et al. (2013) tRNA tKUUU, tQUUG, and tEUUC wobble position modifications fine-tune protein translation by promoting ribosome A-site binding. Proc Natl Acad Sci USA 110: 12289–12294.
-
(2013)
Proc Natl Acad Sci USA
, vol.110
, pp. 12289-12294
-
-
Rezgui, V.A.1
Tyagi, K.2
Ranjan, N.3
Konevega, A.L.4
Mittelstaet, J.5
-
31
-
-
84858000251
-
The Elongator subcomplex Elp456 is a hexameric RecA-like ATPase
-
Glatt S, Letoquart J, Faux C, Taylor NM, Seraphin B, et al. (2012) The Elongator subcomplex Elp456 is a hexameric RecA-like ATPase. Nat Struct Mol Biol 19: 314–320.
-
(2012)
Nat Struct Mol Biol
, vol.19
, pp. 314-320
-
-
Glatt, S.1
Letoquart, J.2
Faux, C.3
Taylor, N.M.4
Seraphin, B.5
-
32
-
-
84902080752
-
A conserved and essential basic region mediates tRNA binding to the Elp1 subunit of the Saccharomyces cerevisiae Elongator complex
-
Di Santo R, Bandau S, Stark MJR, (2014) A conserved and essential basic region mediates tRNA binding to the Elp1 subunit of the Saccharomyces cerevisiae Elongator complex. Mol Microbiol 92: 1227–1242.
-
(2014)
Mol Microbiol
, vol.92
, pp. 1227-1242
-
-
Di Santo, R.1
Bandau, S.2
Stark, M.J.R.3
-
33
-
-
33645070795
-
4 cluster and binds S-adenosylmethionine
-
Paraskevopoulou C, Fairhurst SA, Lowe DJ, Brick P, Onesti S, (2006) The Elongator subunit Elp3 contains a Fe4S4 cluster and binds S-adenosylmethionine. Mol Microbiol 59: 795–806.
-
(2006)
Mol Microbiol
, vol.59
, pp. 795-806
-
-
Paraskevopoulou, C.1
Fairhurst, S.A.2
Lowe, D.J.3
Brick, P.4
Onesti, S.5
-
34
-
-
83055179165
-
Cfr and RlmN contain a single [4Fe-4S] cluster, which directs two distinct reactivities for S-adenosylmethionine: methyl transfer by SN2 displacement and radical generation
-
Grove TL, Radle MI, Krebs C, Booker SJ, (2011) Cfr and RlmN contain a single [4Fe-4S] cluster, which directs two distinct reactivities for S-adenosylmethionine: methyl transfer by SN2 displacement and radical generation. J Am Chem Soc 133: 19586–19589.
-
(2011)
J Am Chem Soc
, vol.133
, pp. 19586-19589
-
-
Grove, T.L.1
Radle, M.I.2
Krebs, C.3
Booker, S.J.4
-
35
-
-
84922060886
-
Archaeal Elp3 catalyzes tRNA wobble uridine modification at C5 via a radical mechanism
-
Selvadurai K, Wang P, Seimetz J, Huang RH, (2014) Archaeal Elp3 catalyzes tRNA wobble uridine modification at C5 via a radical mechanism. Nat Chem Biol 10: 810–812.
-
(2014)
Nat Chem Biol
, vol.10
, pp. 810-812
-
-
Selvadurai, K.1
Wang, P.2
Seimetz, J.3
Huang, R.H.4
-
36
-
-
0035697437
-
Sit4p protein phosphatase is required for sensitivity of Saccharomyces cerevisiae to Kluyveromyces lactis zymocin
-
Jablonowski D, Butler AR, Fichtner L, Gardiner D, Schaffrath R, et al. (2001) Sit4p protein phosphatase is required for sensitivity of Saccharomyces cerevisiae to Kluyveromyces lactis zymocin. Genetics 159: 1479–1489.
-
(2001)
Genetics
, vol.159
, pp. 1479-1489
-
-
Jablonowski, D.1
Butler, A.R.2
Fichtner, L.3
Gardiner, D.4
Schaffrath, R.5
-
37
-
-
70350179460
-
Elongator function depends on antagonistic regulation by casein kinase Hrr25 and protein phosphatase Sit4
-
Mehlgarten C, Jablonowski D, Breunig KD, Stark MJR, Schaffrath R, (2009) Elongator function depends on antagonistic regulation by casein kinase Hrr25 and protein phosphatase Sit4. Mol Microbiol 73: 869–881.
-
(2009)
Mol Microbiol
, vol.73
, pp. 869-881
-
-
Mehlgarten, C.1
Jablonowski, D.2
Breunig, K.D.3
Stark, M.J.R.4
Schaffrath, R.5
-
38
-
-
0038280146
-
Mutant casein kinase I (Hrr25p/Kti14p) abrogates the G1 cell cycle arrest induced by Kluyveromyces lactis zymocin in budding yeast
-
Mehlgarten C, Schaffrath R, (2003) Mutant casein kinase I (Hrr25p/Kti14p) abrogates the G1 cell cycle arrest induced by Kluyveromyces lactis zymocin in budding yeast. Mol Genet Genomics 269: 188–196.
-
(2003)
Mol Genet Genomics
, vol.269
, pp. 188-196
-
-
Mehlgarten, C.1
Schaffrath, R.2
-
39
-
-
1542373731
-
The yeast elongator histone acetylase requires Sit4-dependent dephosphorylation for toxin-target capacity
-
Jablonowski D, Fichtner L, Stark MJR, Schaffrath R, (2004) The yeast elongator histone acetylase requires Sit4-dependent dephosphorylation for toxin-target capacity. Mol Biol Cell 15: 1459–1469.
-
(2004)
Mol Biol Cell
, vol.15
, pp. 1459-1469
-
-
Jablonowski, D.1
Fichtner, L.2
Stark, M.J.R.3
Schaffrath, R.4
-
40
-
-
77958031723
-
The rapamycin-sensitive phosphoproteome reveals that TOR controls protein kinase A toward some but not all substrates
-
Soulard A, Cremonesi A, Moes S, Schutz F, Jeno P, et al. (2010) The rapamycin-sensitive phosphoproteome reveals that TOR controls protein kinase A toward some but not all substrates. Mol Biol Cell 21: 3475–3486.
-
(2010)
Mol Biol Cell
, vol.21
, pp. 3475-3486
-
-
Soulard, A.1
Cremonesi, A.2
Moes, S.3
Schutz, F.4
Jeno, P.5
-
41
-
-
79959240249
-
Binary classification of protein molecules into intrinsically disordered and ordered segments
-
Fukuchi S, Hosoda K, Homma K, Gojobori T, Nishikawa K, (2011) Binary classification of protein molecules into intrinsically disordered and ordered segments. BMC Struc Biol 11: 29.
-
(2011)
BMC Struc Biol
, vol.11
, pp. 29
-
-
Fukuchi, S.1
Hosoda, K.2
Homma, K.3
Gojobori, T.4
Nishikawa, K.5
-
42
-
-
84873521371
-
Phosphorylation variation during the cell cycle scales with structural propensities of proteins
-
Tyanova S, Cox J, Olsen J, Mann M, Frishman D, (2013) Phosphorylation variation during the cell cycle scales with structural propensities of proteins. PLoS Comput Biol 9: e1002842.
-
(2013)
PLoS Comput Biol
, vol.9
, pp. e1002842
-
-
Tyanova, S.1
Cox, J.2
Olsen, J.3
Mann, M.4
Frishman, D.5
-
43
-
-
0027980497
-
Two Saccharomyces cerevisiae genes which control sensitivity to G1 arrest induced by Kluyveromyces lactis toxin
-
Butler AR, White JH, Folawiyo Y, Edlin A, Gardiner D, et al. (1994) Two Saccharomyces cerevisiae genes which control sensitivity to G1 arrest induced by Kluyveromyces lactis toxin. Mol Cell Biol 14: 6306–6316.
-
(1994)
Mol Cell Biol
, vol.14
, pp. 6306-6316
-
-
Butler, A.R.1
White, J.H.2
Folawiyo, Y.3
Edlin, A.4
Gardiner, D.5
-
44
-
-
52949102950
-
A genome-wide screen identifies genes required for formation of the wobble nucleoside 5-methoxycarbonylmethyl-2-thiouridine in Saccharomyces cerevisiae
-
Huang B, Lu J, Bystrom AS, (2008) A genome-wide screen identifies genes required for formation of the wobble nucleoside 5-methoxycarbonylmethyl-2-thiouridine in Saccharomyces cerevisiae. RNA 14: 2183–2194.
-
(2008)
RNA
, vol.14
, pp. 2183-2194
-
-
Huang, B.1
Lu, J.2
Bystrom, A.S.3
-
45
-
-
0036267462
-
Molecular analysis of KTI12/TOT4, a Saccharomyces cerevisiae gene required for Kluyveromyces lactis zymocin action
-
Fichtner L, Frohloff F, Burkner K, Larsen M, Breunig KD, et al. (2002) Molecular analysis of KTI12/TOT4, a Saccharomyces cerevisiae gene required for Kluyveromyces lactis zymocin action. Mol Microbiol 43: 783–791.
-
(2002)
Mol Microbiol
, vol.43
, pp. 783-791
-
-
Fichtner, L.1
Frohloff, F.2
Burkner, K.3
Larsen, M.4
Breunig, K.D.5
-
46
-
-
21244463476
-
Physical and functional interaction between Elongator and the chromatin-associated Kti12 protein
-
Petrakis TG, Sogaard TM, Erdjument-Bromage H, Tempst P, Svejstrup JQ, (2005) Physical and functional interaction between Elongator and the chromatin-associated Kti12 protein. J Biol Chem 280: 19454–19460.
-
(2005)
J Biol Chem
, vol.280
, pp. 19454-19460
-
-
Petrakis, T.G.1
Sogaard, T.M.2
Erdjument-Bromage, H.3
Tempst, P.4
Svejstrup, J.Q.5
-
47
-
-
0033768106
-
Analysis of yeast protein kinases using protein chips
-
Zhu H, Klemic JF, Chang S, Bertone P, Casamayor A, et al. (2000) Analysis of yeast protein kinases using protein chips. Nat Genet 26: 283–289.
-
(2000)
Nat Genet
, vol.26
, pp. 283-289
-
-
Zhu, H.1
Klemic, J.F.2
Chang, S.3
Bertone, P.4
Casamayor, A.5
-
48
-
-
0037050026
-
Functional organization of the yeast proteome by systematic analysis of protein complexes
-
Gavin AC, Bosche M, Krause R, Grandi P, Marzioch M, et al. (2002) Functional organization of the yeast proteome by systematic analysis of protein complexes. Nature 415: 141–147.
-
(2002)
Nature
, vol.415
, pp. 141-147
-
-
Gavin, A.C.1
Bosche, M.2
Krause, R.3
Grandi, P.4
Marzioch, M.5
-
49
-
-
33745228890
-
Hrr25-dependent phosphorylation state regulates organization of the pre-40S subunit
-
Schäfer T, Maco B, Petfalski E, Tollervey D, Bottcher B, et al. (2006) Hrr25-dependent phosphorylation state regulates organization of the pre-40S subunit. Nature 441: 651–655.
-
(2006)
Nature
, vol.441
, pp. 651-655
-
-
Schäfer, T.1
Maco, B.2
Petfalski, E.3
Tollervey, D.4
Bottcher, B.5
-
50
-
-
0029818391
-
Prenylated isoforms of yeast casein kinase I, including the novel Yck3p, suppress the gcs1 blockage of cell proliferation from stationary phase
-
Wang X, Hoekstra MF, DeMaggio AJ, Dhillon N, Vancura A, et al. (1996) Prenylated isoforms of yeast casein kinase I, including the novel Yck3p, suppress the gcs1 blockage of cell proliferation from stationary phase. Mol Cell Biol 16: 5375–5385.
-
(1996)
Mol Cell Biol
, vol.16
, pp. 5375-5385
-
-
Wang, X.1
Hoekstra, M.F.2
DeMaggio, A.J.3
Dhillon, N.4
Vancura, A.5
-
51
-
-
3042542949
-
Akr1p-dependent palmitoylation of Yck2p yeast casein kinase 1 is necessary and sufficient for plasma membrane targeting
-
Babu P, Deschenes RJ, Robinson LC, (2004) Akr1p-dependent palmitoylation of Yck2p yeast casein kinase 1 is necessary and sufficient for plasma membrane targeting. J Biol Chem 279: 27138–27147.
-
(2004)
J Biol Chem
, vol.279
, pp. 27138-27147
-
-
Babu, P.1
Deschenes, R.J.2
Robinson, L.C.3
-
52
-
-
0027168362
-
Casein kinase I-like protein kinases encoded by YCK1 and YCK2 are required for yeast morphogenesis
-
Robinson LC, Menold MM, Garrett S, Culbertson MR, (1993) Casein kinase I-like protein kinases encoded by YCK1 and YCK2 are required for yeast morphogenesis. Mol Cell Biol 13: 2870–2881.
-
(1993)
Mol Cell Biol
, vol.13
, pp. 2870-2881
-
-
Robinson, L.C.1
Menold, M.M.2
Garrett, S.3
Culbertson, M.R.4
-
53
-
-
78650632764
-
Phosphoproteomic analysis reveals interconnected system-wide responses to perturbations of kinases and phosphatases in yeast
-
Bodenmiller B, Wanka S, Kraft C, Urban J, Campbell D, et al. (2010) Phosphoproteomic analysis reveals interconnected system-wide responses to perturbations of kinases and phosphatases in yeast. Sci Signal 3: rs4.
-
(2010)
Sci Signal
, vol.3
, pp. rs4
-
-
Bodenmiller, B.1
Wanka, S.2
Kraft, C.3
Urban, J.4
Campbell, D.5
-
54
-
-
0026040191
-
Consensus sequences as substrate specificity determinants for protein kinases and protein phosphatases
-
Kennelly PJ, Krebs EG, (1991) Consensus sequences as substrate specificity determinants for protein kinases and protein phosphatases. J Biol Chem 266: 15555–15558.
-
(1991)
J Biol Chem
, vol.266
, pp. 15555-15558
-
-
Kennelly, P.J.1
Krebs, E.G.2
-
55
-
-
84863098172
-
Molecular architecture of the yeast monopolin complex
-
Corbett KD, Harrison SC, (2012) Molecular architecture of the yeast monopolin complex. Cell Rep 1: 583–589.
-
(2012)
Cell Rep
, vol.1
, pp. 583-589
-
-
Corbett, K.D.1
Harrison, S.C.2
-
56
-
-
84905391741
-
Hrr25 kinase promotes selective autophagy by phosphorylating the cargo receptor Atg19
-
Pfaffenwimmer T, Reiter W, Brach T, Nogellova V, Papinski D, et al. (2014) Hrr25 kinase promotes selective autophagy by phosphorylating the cargo receptor Atg19. EMBO Rep 15: 862–870.
-
(2014)
EMBO Rep
, vol.15
, pp. 862-870
-
-
Pfaffenwimmer, T.1
Reiter, W.2
Brach, T.3
Nogellova, V.4
Papinski, D.5
-
57
-
-
44349179816
-
The Saccharomyces cerevisiae 60S ribosome biogenesis factor Tif6p is regulated by Hrr25p-mediated phosphorylation
-
Ray P, Basu U, Ray A, Majumdar R, Deng H, et al. (2008) The Saccharomyces cerevisiae 60S ribosome biogenesis factor Tif6p is regulated by Hrr25p-mediated phosphorylation. J Biol Chem 283: 9681–9691.
-
(2008)
J Biol Chem
, vol.283
, pp. 9681-9691
-
-
Ray, P.1
Basu, U.2
Ray, A.3
Majumdar, R.4
Deng, H.5
-
58
-
-
84861671920
-
Translational control of cell division by elongator
-
Bauer F, Matsuyama M, Candiracci J, Dieu M, Scheliga J, et al. (2012) Translational control of cell division by elongator. Cell Rep 1: 424–433.
-
(2012)
Cell Rep
, vol.1
, pp. 424-433
-
-
Bauer, F.1
Matsuyama, M.2
Candiracci, J.3
Dieu, M.4
Scheliga, J.5
-
59
-
-
84884598021
-
Loss of a Conserved tRNA Anticodon Modification Perturbs Cellular Signaling
-
Zinshteyn B, Gilbert WV, (2013) Loss of a Conserved tRNA Anticodon Modification Perturbs Cellular Signaling. PLoS Genet 9: e1003675.
-
(2013)
PLoS Genet
, vol.9
, pp. e1003675
-
-
Zinshteyn, B.1
Gilbert, W.V.2
-
60
-
-
84896342480
-
A system of RNA modifications and biased codon use controls cellular stress response at the level of translation
-
Dedon PC, Begley TJ, (2014) A system of RNA modifications and biased codon use controls cellular stress response at the level of translation. Chem Res Toxicol 27: 330–337.
-
(2014)
Chem Res Toxicol
, vol.27
, pp. 330-337
-
-
Dedon, P.C.1
Begley, T.J.2
-
61
-
-
78650683942
-
A quantitative systems approach reveals dynamic control of tRNA modifications during cellular stress
-
Chan CT, Dyavaiah M, DeMott MS, Taghizadeh K, Dedon PC, et al. (2010) A quantitative systems approach reveals dynamic control of tRNA modifications during cellular stress. PLoS Genet 6: e1001247.
-
(2010)
PLoS Genet
, vol.6
, pp. e1001247
-
-
Chan, C.T.1
Dyavaiah, M.2
DeMott, M.S.3
Taghizadeh, K.4
Dedon, P.C.5
-
62
-
-
84867259656
-
Increased tRNA modification and gene-specific codon usage regulate cell cycle progression during the DNA damage response
-
Patil A, Dyavaiah M, Joseph F, Rooney JP, Chan CT, et al. (2012) Increased tRNA modification and gene-specific codon usage regulate cell cycle progression during the DNA damage response. Cell Cycle 11: 3656–3665.
-
(2012)
Cell Cycle
, vol.11
, pp. 3656-3665
-
-
Patil, A.1
Dyavaiah, M.2
Joseph, F.3
Rooney, J.P.4
Chan, C.T.5
-
63
-
-
0242355632
-
Calcineurin signaling in Saccharomyces cerevisiae: how yeast go crazy in response to stress
-
Cyert MS, (2003) Calcineurin signaling in Saccharomyces cerevisiae: how yeast go crazy in response to stress. Biochem Biophys Res Commun 311: 1143–1150.
-
(2003)
Biochem Biophys Res Commun
, vol.311
, pp. 1143-1150
-
-
Cyert, M.S.1
-
64
-
-
77950560161
-
Rec8 phosphorylation by casein kinase 1 and Cdc7-Dbf4 kinase regulates cohesin cleavage by separase during meiosis
-
Katis VL, Lipp JJ, Imre R, Bogdanova A, Okaz E, et al. (2010) Rec8 phosphorylation by casein kinase 1 and Cdc7-Dbf4 kinase regulates cohesin cleavage by separase during meiosis. Devel Cell 18: 397–409.
-
(2010)
Devel Cell
, vol.18
, pp. 397-409
-
-
Katis, V.L.1
Lipp, J.J.2
Imre, R.3
Bogdanova, A.4
Okaz, E.5
-
65
-
-
84908361088
-
Hrr25 triggers selective autophagy-related pathways by phosphorylating receptor proteins
-
Tanaka C, Tan LJ, Mochida K, Kirisako H, Koizumi M, et al. (2014) Hrr25 triggers selective autophagy-related pathways by phosphorylating receptor proteins. J Cell Biol 207: 91–105.
-
(2014)
J Cell Biol
, vol.207
, pp. 91-105
-
-
Tanaka, C.1
Tan, L.J.2
Mochida, K.3
Kirisako, H.4
Koizumi, M.5
-
66
-
-
0031036674
-
Role of the casein kinase I isoform, Hrr25, and the cell cycle-regulatory transcription factor, SBF, in the transcriptional response to DNA damage in Saccharomyces cerevisiae
-
Ho Y, Mason S, Kobayashi R, Hoekstra M, Andrews B, (1997) Role of the casein kinase I isoform, Hrr25, and the cell cycle-regulatory transcription factor, SBF, in the transcriptional response to DNA damage in Saccharomyces cerevisiae. Proc Natl Acad Sci USA 94: 581–586.
-
(1997)
Proc Natl Acad Sci USA
, vol.94
, pp. 581-586
-
-
Ho, Y.1
Mason, S.2
Kobayashi, R.3
Hoekstra, M.4
Andrews, B.5
-
67
-
-
36749085941
-
Trm9-Catalyzed tRNA Modifications link translation to the DNA damage response
-
Begley U, Dyavaiah M, Patil A, Rooney JP, DiRenzo D, et al. (2007) Trm9-Catalyzed tRNA Modifications link translation to the DNA damage response. Mol Cell 28: 860–870.
-
(2007)
Mol Cell
, vol.28
, pp. 860-870
-
-
Begley, U.1
Dyavaiah, M.2
Patil, A.3
Rooney, J.P.4
DiRenzo, D.5
-
68
-
-
84924372619
-
-
Amberg DC, Burke D, Strathern JN (2005) Methods in yeast genetics: a Cold Spring Harbor Laboratory course manual. New York: Cold Spring Harbor Laboratory Press.
-
(2005)
-
-
Amberg, D.C.1
Burke, D.2
Strathern, J.N.3
-
69
-
-
84924372618
-
-
Sambrook J, Russell DW (2001) Molecular cloning: a laboratory manual: Cold Spring Harbor Laboratory Press.
-
-
-
-
70
-
-
27744435957
-
Additional vectors for PCR-based gene tagging in Saccharomyces cerevisiae and Schizosaccharomyces pombe using nourseothricin resistance
-
Van Driessche B, Tafforeau L, Hentges P, Carr AM, Vandenhaute J, (2005) Additional vectors for PCR-based gene tagging in Saccharomyces cerevisiae and Schizosaccharomyces pombe using nourseothricin resistance. Yeast 22: 1061–1068.
-
(2005)
Yeast
, vol.22
, pp. 1061-1068
-
-
Van Driessche, B.1
Tafforeau, L.2
Hentges, P.3
Carr, A.M.4
Vandenhaute, J.5
-
71
-
-
0031820288
-
Additional modules for versatile and economical PCR-based gene deletion and modification in Saccharomyces cerevisiae
-
Longtine MS, McKenzie A, 3rdDemarini DJ, Shah NG, Wach A, et al. (1998) Additional modules for versatile and economical PCR-based gene deletion and modification in Saccharomyces cerevisiae. Yeast 14: 953–961.
-
(1998)
Yeast
, vol.14
, pp. 953-961
-
-
Longtine, M.S.1
McKenzie, A.2
Demarini, D.J.3
Shah, N.G.4
Wach, A.5
-
72
-
-
0032775010
-
Epitope tagging of yeast genes using a PCR-based strategy: more tags and improved practical routines
-
Knop M, Siegers K, Pereira G, Zachariae W, Winsor B, et al. (1999) Epitope tagging of yeast genes using a PCR-based strategy: more tags and improved practical routines. Yeast 15: 963–972.
-
(1999)
Yeast
, vol.15
, pp. 963-972
-
-
Knop, M.1
Siegers, K.2
Pereira, G.3
Zachariae, W.4
Winsor, B.5
-
73
-
-
33846599200
-
Tandem affinity purification to enhance interacting protein identification
-
Séraphin B, Puig O, Bouveret E, Rutz B, Caspary F (2002) Tandem affinity purification to enhance interacting protein identification. In: Golemis E, editor. Protein-protein interactions: a molecular cloning manual. Cold Spring Harbor, New York: Cold Spring Harbor Laboratory Press. pp.313–328.
-
(2002)
, pp. 313-328
-
-
Séraphin, B.1
Puig, O.2
Bouveret, E.3
Rutz, B.4
Caspary, F.5
Golemis, E.6
-
74
-
-
0024266139
-
New yeast-Escherichia coli shuttle vectors constructed with in vitro mutagenized yeast genes lacking six-base pair restriction sites
-
Gietz RD, Sugino A, (1988) New yeast-Escherichia coli shuttle vectors constructed with in vitro mutagenized yeast genes lacking six-base pair restriction sites. Gene 74: 527–534.
-
(1988)
Gene
, vol.74
, pp. 527-534
-
-
Gietz, R.D.1
Sugino, A.2
-
75
-
-
0025850305
-
The YDp plasmids: a uniform set of vectors bearing versatile gene disruption cassettes for Saccharomyces cerevisiae
-
Berben G, Dumont J, Gilliquet V, Bolle PA, Hilger F, (1991) The YDp plasmids: a uniform set of vectors bearing versatile gene disruption cassettes for Saccharomyces cerevisiae. Yeast 7: 475–477.
-
(1991)
Yeast
, vol.7
, pp. 475-477
-
-
Berben, G.1
Dumont, J.2
Gilliquet, V.3
Bolle, P.A.4
Hilger, F.5
-
76
-
-
0030151393
-
Isolation and genetic characterization of pGKL killer-insensitive mutants (iki) from Saccharomyces cerevisiae
-
Kishida M, Tokunaga M, Katayose Y, Yajima H, Kawamura-Watabe A, et al. (1996) Isolation and genetic characterization of pGKL killer-insensitive mutants (iki) from Saccharomyces cerevisiae. Biosci Biotechnol Biochem 60: 798–801.
-
(1996)
Biosci Biotechnol Biochem
, vol.60
, pp. 798-801
-
-
Kishida, M.1
Tokunaga, M.2
Katayose, Y.3
Yajima, H.4
Kawamura-Watabe, A.5
-
77
-
-
84895743945
-
Profiling of RNA modifications by multiplexed stable isotope labelling
-
Kellner S, Neumann J, Rosenkranz D, Lebedeva S, Ketting RF, et al. (2014) Profiling of RNA modifications by multiplexed stable isotope labelling. Chem Commun 50: 3516–3518.
-
(2014)
Chem Commun
, vol.50
, pp. 3516-3518
-
-
Kellner, S.1
Neumann, J.2
Rosenkranz, D.3
Lebedeva, S.4
Ketting, R.F.5
-
78
-
-
0017184389
-
A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding
-
Bradford MM, (1976) A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal Biochem 72: 248–254.
-
(1976)
Anal Biochem
, vol.72
, pp. 248-254
-
-
Bradford, M.M.1
-
79
-
-
0343829343
-
Identification of subunits of the anaphase-promoting complex of Saccharomyces cerevisiae
-
Zachariae W, Shin TH, Galova M, Obermaier B, Nasmyth K, (1996) Identification of subunits of the anaphase-promoting complex of Saccharomyces cerevisiae. Science 274: 1201–1204.
-
(1996)
Science
, vol.274
, pp. 1201-1204
-
-
Zachariae, W.1
Shin, T.H.2
Galova, M.3
Obermaier, B.4
Nasmyth, K.5
-
80
-
-
0041700137
-
Elm1p is one of three upstream kinases for the Saccharomyces cerevisiae SNF1 complex
-
Sutherland CM, Hawley SA, McCartney RR, Leech A, Stark MJR, et al. (2003) Elm1p is one of three upstream kinases for the Saccharomyces cerevisiae SNF1 complex. Curr Biol 13: 1299–1305.
-
(2003)
Curr Biol
, vol.13
, pp. 1299-1305
-
-
Sutherland, C.M.1
Hawley, S.A.2
McCartney, R.R.3
Leech, A.4
Stark, M.J.R.5
-
81
-
-
0007987551
-
Assay and purification of protein–serine/threonine kinases
-
Hardie DG, Haystead TAJ, Salt IP, Davies SP (1999) Assay and purification of protein–serine/threonine kinases. In: Hardie DG, editor. Protein Phosphorylation: a Practical Approach. 2nd edition. Oxford: Oxford University Press. pp.201–220.
-
(1999)
, pp. 201-220
-
-
Hardie, D.G.1
Haystead, T.A.J.2
Salt, I.P.3
Davies, S.P.4
Hardie, D.G.5
-
82
-
-
84883591545
-
Scalable web services for the PSIPRED Protein Analysis Workbench
-
Buchan DW, Minneci F, Nugent TC, Bryson K, Jones DT, (2013) Scalable web services for the PSIPRED Protein Analysis Workbench. Nucleic Acids Res 41: W349–W357.
-
(2013)
Nucleic Acids Res
, vol.41
, pp. W349-W357
-
-
Buchan, D.W.1
Minneci, F.2
Nugent, T.C.3
Bryson, K.4
Jones, D.T.5
-
83
-
-
0034623005
-
T-Coffee: A novel method for fast and accurate multiple sequence alignment
-
Notredame C, Higgins DG, Heringa J, (2000) T-Coffee: A novel method for fast and accurate multiple sequence alignment. J Mol Biol 302: 205–217.
-
(2000)
J Mol Biol
, vol.302
, pp. 205-217
-
-
Notredame, C.1
Higgins, D.G.2
Heringa, J.3
-
84
-
-
0141454918
-
Elongator's toxin-target (TOT) function is nuclear localization sequence dependent and suppressed by post-translational modification
-
Fichtner L, Jablonowski D, Schierhorn A, Kitamoto HK, Stark MJR, et al. (2003) Elongator's toxin-target (TOT) function is nuclear localization sequence dependent and suppressed by post-translational modification. Mol Microbiol 49: 1297–1307.
-
(2003)
Mol Microbiol
, vol.49
, pp. 1297-1307
-
-
Fichtner, L.1
Jablonowski, D.2
Schierhorn, A.3
Kitamoto, H.K.4
Stark, M.J.R.5
|