-
1
-
-
41149084179
-
Eph-ephrin bidirectional signaling in physiology and disease
-
Pasquale, E. B. (2008) Eph-ephrin bidirectional signaling in physiology and disease Cell 133, 38-52
-
(2008)
Cell
, vol.133
, pp. 38-52
-
-
Pasquale, E.B.1
-
2
-
-
84868656581
-
EPHA4 is a disease modifier of amyotrophic lateral sclerosis in animal models and in humans
-
Van Hoecke, A., Schoonaet, L., Lemmens, R., Timmers, M., Staats, K. A., Laird, A. S., Peeters, E., Philips, T., Goris, A., Dubois, B., Andersen, P. M., Al-Chalabi, A., Thijs, V., Turnley, A. M., van Vught, P. W., Veldink, J. H., Hardiman, O., Van Den Bosch, L., Gonzalez-Perez, P., Van Damme, P., Brown, R. H., Jr, van den Berg, L. H., and Robberecht, W. (2012) EPHA4 is a disease modifier of amyotrophic lateral sclerosis in animal models and in humans Nat. Med. 18, 1418-1422
-
(2012)
Nat. Med.
, vol.18
, pp. 1418-1422
-
-
Van Hoecke, A.1
Schoonaet, L.2
Lemmens, R.3
Timmers, M.4
Staats, K.A.5
Laird, A.S.6
Peeters, E.7
Philips, T.8
Goris, A.9
Dubois, B.10
Andersen, P.M.11
Al-Chalabi, A.12
Thijs, V.13
Turnley, A.M.14
Van Vught, P.W.15
Veldink, J.H.16
Hardiman, O.17
Van Den Bosch, L.18
Gonzalez-Perez, P.19
Van Damme, P.20
Brown, R.H.21
Van Den Berg, L.H.22
Robberecht, W.23
more..
-
3
-
-
84866902350
-
EPHA4 inhibition rescues neurodegeneration in ALS
-
Faruqi, M. (2012) EPHA4 inhibition rescues neurodegeneration in ALS Nat. Rev. Drug Discovery 11, 747
-
(2012)
Nat. Rev. Drug Discovery
, vol.11
, pp. 747
-
-
Faruqi, M.1
-
4
-
-
84884501302
-
Eph/ephrin recognition and the role of Eph/ephrin clusters in signaling initiation
-
Nikolov, D. B., Xu, K., and Himanen, J. P. (2013) Eph/ephrin recognition and the role of Eph/ephrin clusters in signaling initiation Biochim. Biophys. Acta 1834, 2160-2165
-
(2013)
Biochim. Biophys. Acta
, vol.1834
, pp. 2160-2165
-
-
Nikolov, D.B.1
Xu, K.2
Himanen, J.P.3
-
5
-
-
43449099127
-
The amyotrophic lateral sclerosis 8 protein VAPB is cleaved, secreted, and acts as a ligand for Eph receptors
-
Tsuda, H., Han, S. M., Yang, Y., Tong, C., Lin, Y. Q., Mohan, K., Haueter, C., Zoghbi, A., Harati, Y., Kwan, J., Miller, M. A., and Bellen, H. J. (2008) The amyotrophic lateral sclerosis 8 protein VAPB is cleaved, secreted, and acts as a ligand for Eph receptors Cell 133, 963-977
-
(2008)
Cell
, vol.133
, pp. 963-977
-
-
Tsuda, H.1
Han, S.M.2
Yang, Y.3
Tong, C.4
Lin, Y.Q.5
Mohan, K.6
Haueter, C.7
Zoghbi, A.8
Harati, Y.9
Kwan, J.10
Miller, M.A.11
Bellen, H.J.12
-
6
-
-
80055113691
-
Structural, stability, dynamic, and binding properties of the ALS-causing T46I mutant of the hVAPB MSP domain as revealed by NMR and MD simulations
-
Lua, S., Qin, H., Lim, L., Shi, J., Gupta, G., and Song, J. (2011) Structural, stability, dynamic, and binding properties of the ALS-causing T46I mutant of the hVAPB MSP domain as revealed by NMR and MD simulations PLoS One 6, e27072
-
(2011)
PLoS One
, vol.6
, pp. 27072
-
-
Lua, S.1
Qin, H.2
Lim, L.3
Shi, J.4
Gupta, G.5
Song, J.6
-
7
-
-
84857442694
-
Targeting Eph receptors with peptides and small molecules: Progress and challenges
-
Noberini, R., Lamberto, I., and Pasquale, E. B. (2012) Targeting Eph receptors with peptides and small molecules: Progress and challenges Semin. Cell Dev. Biol. 23, 51-57
-
(2012)
Semin. Cell Dev. Biol.
, vol.23
, pp. 51-57
-
-
Noberini, R.1
Lamberto, I.2
Pasquale, E.B.3
-
8
-
-
57649178194
-
Small molecules can selectively inhibit ephrin binding to the EphA4 and EphA2 receptors
-
Noberini, R., Koolpe, M., Peddibhotla, S., Dahl, R., Su, Y., Cosford, N. D., Roth, G. P., and Pasquale, E. B. (2008) Small molecules can selectively inhibit ephrin binding to the EphA4 and EphA2 receptors J. Biol. Chem. 283, 29461-29472
-
(2008)
J. Biol. Chem.
, vol.283
, pp. 29461-29472
-
-
Noberini, R.1
Koolpe, M.2
Peddibhotla, S.3
Dahl, R.4
Su, Y.5
Cosford, N.D.6
Roth, G.P.7
Pasquale, E.B.8
-
9
-
-
57649186979
-
Crystal structure and NMR binding reveal that two small molecule antagonists target the high affinity ephrin-binding channel of the EphA4 receptor
-
Qin, H., Shi, J., Noberini, R., Pasquale, E. B., and Song, J. (2008) Crystal structure and NMR binding reveal that two small molecule antagonists target the high affinity ephrin-binding channel of the EphA4 receptor J. Biol. Chem. 283, 29473-29484
-
(2008)
J. Biol. Chem.
, vol.283
, pp. 29473-29484
-
-
Qin, H.1
Shi, J.2
Noberini, R.3
Pasquale, E.B.4
Song, J.5
-
10
-
-
84865050506
-
A small molecule agonist of EphA2 receptor tyrosine kinase inhibits tumor cell migration in vitro and prostate cancer metastasis in vivo
-
Petty, A., Myshkin, E., Qin, H., Guo, H., Miao, H., Tochtrop, G. P., Hsieh, J. T., Page, P., Liu, L., Lindner, D. J., Acharya, C., MacKerell, A. D., Jr, Ficker, E., Song, J., and Wang, B. (2012) A small molecule agonist of EphA2 receptor tyrosine kinase inhibits tumor cell migration in vitro and prostate cancer metastasis in vivo PLoS One 7, e42120
-
(2012)
PLoS One
, vol.7
, pp. 42120
-
-
Petty, A.1
Myshkin, E.2
Qin, H.3
Guo, H.4
Miao, H.5
Tochtrop, G.P.6
Hsieh, J.T.7
Page, P.8
Liu, L.9
Lindner, D.J.10
Acharya, C.11
MacKerell, D.M.A.12
Ficker, E.13
Song, J.14
Wang, B.15
-
11
-
-
64849111005
-
Sending signals dynamically
-
Smock, R. G. and Gierasch, L. M. (2009) Sending signals dynamically Science 324, 198-203
-
(2009)
Science
, vol.324
, pp. 198-203
-
-
Smock, R.G.1
Gierasch, L.M.2
-
12
-
-
84876275408
-
The underappreciated role of allostery in the cellular network
-
Nussinov, R., Tsai, C. J., and Ma, B. (2013) The underappreciated role of allostery in the cellular network Annu. Rev. Biophys. 42, 169-189
-
(2013)
Annu. Rev. Biophys.
, vol.42
, pp. 169-189
-
-
Nussinov, R.1
Tsai, C.J.2
Ma, B.3
-
13
-
-
70350340728
-
The role of dynamic conformational ensembles in biomolecular recognition
-
Boehr, D. D., Nussinov, R., and Wright, P. E. (2009) The role of dynamic conformational ensembles in biomolecular recognition Nat. Chem. Biol. 5, 789-796
-
(2009)
Nat. Chem. Biol.
, vol.5
, pp. 789-796
-
-
Boehr, D.D.1
Nussinov, R.2
Wright, P.E.3
-
14
-
-
79952463416
-
Dynamically-driven inactivation of the catalytic machinery of the SARS 3C-like protease by the N214A mutation on the extra domain
-
Shi, J., Han, N., Lim, L., Lua, S., Sivaraman, J., Wang, L., Mu, Y., and Song, J. (2011) Dynamically-driven inactivation of the catalytic machinery of the SARS 3C-like protease by the N214A mutation on the extra domain PLoS Comput. Biol. 7, e1001084
-
(2011)
PLoS Comput. Biol.
, vol.7
, pp. 1001084
-
-
Shi, J.1
Han, N.2
Lim, L.3
Lua, S.4
Sivaraman, J.5
Wang, L.6
Mu, Y.7
Song, J.8
-
15
-
-
84884549365
-
Unique structure and dynamics of the EphA5 ligand binding domain mediate its binding specificity as revealed by X-ray crystallography, NMR, and MD simulations
-
Huan, X., Shi, J., Lim, L., Mitra, S., Zhu, W., Qin, H., Pasquale, E. B., and Song, J. (2013) Unique structure and dynamics of the EphA5 ligand binding domain mediate its binding specificity as revealed by X-ray crystallography, NMR, and MD simulations PLoS One 8, e74040
-
(2013)
PLoS One
, vol.8
, pp. 74040
-
-
Huan, X.1
Shi, J.2
Lim, L.3
Mitra, S.4
Zhu, W.5
Qin, H.6
Pasquale, E.B.7
Song, J.8
-
16
-
-
73649128536
-
Structural characterization of the EphA4-Ephrin-B2 complex reveals new features enabling Eph-ephrin binding promiscuity
-
Qin, H., Noberini, R., Huan, X., Shi, J., Pasquale, E. B., and Song, J. (2010) Structural characterization of the EphA4-Ephrin-B2 complex reveals new features enabling Eph-ephrin binding promiscuity J. Biol. Chem. 285, 644-654
-
(2010)
J. Biol. Chem.
, vol.285
, pp. 644-654
-
-
Qin, H.1
Noberini, R.2
Huan, X.3
Shi, J.4
Pasquale, E.B.5
Song, J.6
-
17
-
-
84856231062
-
Protein dynamics at Eph receptor-ligand interfaces as revealed by crystallography, NMR, and MD simulations
-
Qin, H., Lim, L., and Song, J. (2012) Protein dynamics at Eph receptor-ligand interfaces as revealed by crystallography, NMR, and MD simulations BMC Biophys. 5, 2-10
-
(2012)
BMC Biophys.
, vol.5
, pp. 2-10
-
-
Qin, H.1
Lim, L.2
Song, J.3
-
18
-
-
0031566963
-
The main-chain dynamics of the dynamin pleckstrin homology (PH) domain in solution: Analysis of 15N relaxation with monomer/dimer equilibration
-
Fushman, D., Cahill, S., and Cowburn, D. (1997) The main-chain dynamics of the dynamin pleckstrin homology (PH) domain in solution: Analysis of 15N relaxation with monomer/dimer equilibration J. Mol. Biol. 266, 173-194
-
(1997)
J. Mol. Biol.
, vol.266
, pp. 173-194
-
-
Fushman, D.1
Cahill, S.2
Cowburn, D.3
-
19
-
-
0037138654
-
Slow internal dynamics in proteins: Application of NMR relaxation dispersion spectroscopy to methyl groups in a cavity mutant of T4 lysozyme
-
Mulder, F. A., Hon, B., Mittermaier, A., Dahlquist, F. W., and Kay, L. E. (2002) Slow internal dynamics in proteins: Application of NMR relaxation dispersion spectroscopy to methyl groups in a cavity mutant of T4 lysozyme J. Am. Chem. Soc. 124, 1443-1451
-
(2002)
J. Am. Chem. Soc.
, vol.124
, pp. 1443-1451
-
-
Mulder, F.A.1
Hon, B.2
Mittermaier, A.3
Dahlquist, F.W.4
Kay, L.E.5
-
20
-
-
4243155782
-
NMR characterization of the dynamics of biomacromolecules
-
Palmer, A. G. (2004) NMR characterization of the dynamics of biomacromolecules Chem. Rev. 104, 3623-3640
-
(2004)
Chem. Rev.
, vol.104
, pp. 3623-3640
-
-
Palmer, A.G.1
-
21
-
-
79958837339
-
An introduction to NMR-based approaches for measuring protein dynamics
-
Kleckner, I. R. and Foster, M. P. (2011) An introduction to NMR-based approaches for measuring protein dynamics Biochim. Biophys. Acta 1814, 942-968
-
(2011)
Biochim. Biophys. Acta
, vol.1814
, pp. 942-968
-
-
Kleckner, I.R.1
Foster, M.P.2
-
22
-
-
0034728579
-
The static magnetic field dependence of chemical exchange line broadening defines the NMR chemical shift time scale
-
Millet, O., Loria, J. P., Kroenke, C. D., Pons, M., and Palmer, A. G., III (2000) The static magnetic field dependence of chemical exchange line broadening defines the NMR chemical shift time scale J. Am. Chem. Soc. 122, 2867-2877
-
(2000)
J. Am. Chem. Soc.
, vol.122
, pp. 2867-2877
-
-
Millet, O.1
Loria, J.P.2
Kroenke, C.D.3
Pons, M.4
Palmer, A.G.5
-
23
-
-
84883403423
-
Automated identification of functional dynamic contact networks from X-ray crystallography
-
van den Bedem, H., Bhabha, G., Yang, K., Wright, P. E., and Fraser, J. S. (2013) Automated identification of functional dynamic contact networks from X-ray crystallography Nat. Methods 10, 896-902
-
(2013)
Nat. Methods
, vol.10
, pp. 896-902
-
-
Van Den Bedem, H.1
Bhabha, G.2
Yang, K.3
Wright, P.E.4
Fraser, J.S.5
-
24
-
-
84904512226
-
Dynamically-driven enhancement of the catalytic machinery of the SARS 3C-like protease by the S284-T285-I286/A mutations on the extra domain
-
Lim, L., Shi, J., Mu, Y., and Song, J. (2014) Dynamically-driven enhancement of the catalytic machinery of the SARS 3C-like protease by the S284-T285-I286/A mutations on the extra domain PLoS One 9, e101941
-
(2014)
PLoS One
, vol.9
, pp. 101941
-
-
Lim, L.1
Shi, J.2
Mu, Y.3
Song, J.4
-
25
-
-
84881480308
-
Structurally encoded intraclass differences in EphA clusters drive distinct cell responses
-
Seiradake, E., Schaupp, A., Ruiz, D. T., Kaufmann, R., Mitakidis, N., Harlos, K., Aricescu, A. R., Klein, R., and Jones, E. Y. (2013) Structurally encoded intraclass differences in EphA clusters drive distinct cell responses Nat. Struct Mol. Biol. 20, 958-964
-
(2013)
Nat. Struct Mol. Biol.
, vol.20
, pp. 958-964
-
-
Seiradake, E.1
Schaupp, A.2
Ruiz, D.T.3
Kaufmann, R.4
Mitakidis, N.5
Harlos, K.6
Aricescu, A.R.7
Klein, R.8
Jones, E.Y.9
-
26
-
-
84883325814
-
Insights into Eph receptor tyrosine kinase activation from crystal structures of the EphA4 ectodomain and its complex with ephrin-A5
-
Xu, K., Tzvetkova-Robev, D., Xu, Y., Goldgur, Y., Chan, Y., Himanen, J. P., and Nikolov, D. B. (2013) Insights into Eph receptor tyrosine kinase activation from crystal structures of the EphA4 ectodomain and its complex with ephrin-A5 Proc. Natl. Acad. Sci. U.S.A. 110, 14634-14639
-
(2013)
Proc. Natl. Acad. Sci. U.S.A.
, vol.110
, pp. 14634-14639
-
-
Xu, K.1
Tzvetkova-Robev, D.2
Xu, Y.3
Goldgur, Y.4
Chan, Y.5
Himanen, J.P.6
Nikolov, D.B.7
-
27
-
-
80052611727
-
A disalicylic acid-furanyl derivative inhibits ephrin binding to a subset of Eph receptors
-
Noberini, R., De, S. K., Zhang, Z., Wu, B., Raveendra-Panickar, D., Chen, V., Vazquez, J., Qin, H., Song, J., Cosford, N. D. P., Pellecchia, M., and Pasquale, E. B. (2011) A disalicylic acid-furanyl derivative inhibits ephrin binding to a subset of Eph receptors Chem. Biol. Drug Des. 78, 667-678
-
(2011)
Chem. Biol. Drug Des.
, vol.78
, pp. 667-678
-
-
Noberini, R.1
De, S.K.2
Zhang, Z.3
Wu, B.4
Raveendra-Panickar, D.5
Chen, V.6
Vazquez, J.7
Qin, H.8
Song, J.9
Cosford, N.D.P.10
Pellecchia, M.11
Pasquale, E.B.12
-
28
-
-
84862486945
-
Distinctive binding of three antagonistic peptides to the ephrin-binding pocket of the EphA4 receptor
-
Lamberto, I., Qin, H., Noberini, R., Premkumar, L., Bourgin, C., Riedl, S. J., Song, J., and Pasquale, E. B. (2012) Distinctive binding of three antagonistic peptides to the ephrin-binding pocket of the EphA4 receptor Biochem. J. 445, 47-56
-
(2012)
Biochem. J.
, vol.445
, pp. 47-56
-
-
Lamberto, I.1
Qin, H.2
Noberini, R.3
Premkumar, L.4
Bourgin, C.5
Riedl, S.J.6
Song, J.7
Pasquale, E.B.8
|