메뉴 건너뛰기




Volumn 290, Issue 4, 2015, Pages 2508-2520

Dual roles of histone H3 lysine 9 acetylation in human embryonic stem cell pluripotency and neural differentiation

Author keywords

[No Author keywords available]

Indexed keywords

ACETYLATION; AMINO ACIDS; CELL GROWTH; CELLS; CHROMOSOMES; CYTOLOGY; GENE EXPRESSION; GENES; STEM CELLS;

EID: 84922042160     PISSN: 00219258     EISSN: 1083351X     Source Type: Journal    
DOI: 10.1074/jbc.M114.603761     Document Type: Article
Times cited : (61)

References (54)
  • 1
    • 35949000868 scopus 로고    scopus 로고
    • Open conformation chromatin and pluripotency
    • Niwa, H. (2007) Open conformation chromatin and pluripotency. Genes Dev. 21, 2671-2676
    • (2007) Genes Dev. , vol.21 , pp. 2671-2676
    • Niwa, H.1
  • 2
    • 33947308285 scopus 로고    scopus 로고
    • How is pluripotency determined and maintained?
    • Niwa, H. (2007) How is pluripotency determined and maintained? Development 134, 635-646
    • (2007) Development , vol.134 , pp. 635-646
    • Niwa, H.1
  • 3
    • 33947301272 scopus 로고    scopus 로고
    • Epigenetic signatures of stem-cell identity
    • Spivakov, M., and Fisher, A. G. (2007) Epigenetic signatures of stem-cell identity. Nat. Rev. Genet. 8, 263-271
    • (2007) Nat. Rev. Genet. , vol.8 , pp. 263-271
    • Spivakov, M.1    Fisher, A.G.2
  • 4
    • 33847287408 scopus 로고    scopus 로고
    • Differences between human embryonic stem cell lines
    • Allegrucci, C., and Young, L. E. (2007) Differences between human embryonic stem cell lines. Hum. Reprod. Update 13, 103-120
    • (2007) Hum. Reprod. Update , vol.13 , pp. 103-120
    • Allegrucci, C.1    Young, L.E.2
  • 8
    • 0035839136 scopus 로고    scopus 로고
    • Translating the histone code
    • Jenuwein, T., and Allis, C. D. (2001) Translating the histone code. Science 293, 1074-1080
    • (2001) Science , vol.293 , pp. 1074-1080
    • Jenuwein, T.1    Allis, C.D.2
  • 9
    • 0034610814 scopus 로고    scopus 로고
    • The language of covalent histone modifications
    • Strahl, B. D., and Allis, C. D. (2000) The language of covalent histone modifications. Nature 403, 41-45
    • (2000) Nature , vol.403 , pp. 41-45
    • Strahl, B.D.1    Allis, C.D.2
  • 11
    • 0030798245 scopus 로고    scopus 로고
    • Histone acetylation in chromatin structure and transcription
    • Grunstein, M. (1997) Histone acetylation in chromatin structure and transcription. Nature 389, 349-352
    • (1997) Nature , vol.389 , pp. 349-352
    • Grunstein, M.1
  • 12
    • 33847076849 scopus 로고    scopus 로고
    • Chromatin modifications and their function
    • Kouzarides, T. (2007) Chromatin modifications and their function. Cell 128, 693-705
    • (2007) Cell , vol.128 , pp. 693-705
    • Kouzarides, T.1
  • 13
    • 34547890019 scopus 로고    scopus 로고
    • Functions of site-specific histone acetylation and deacetylation
    • Shahbazian, M. D., and Grunstein, M. (2007) Functions of site-specific histone acetylation and deacetylation. Annu. Rev. Biochem. 76, 75-100
    • (2007) Annu. Rev. Biochem. , vol.76 , pp. 75-100
    • Shahbazian, M.D.1    Grunstein, M.2
  • 15
    • 0031244521 scopus 로고    scopus 로고
    • Nuclear histone acetylases and deacetylases and transcriptional regulation: HATs off to HDACs
    • Hassig, C. A., and Schreiber, S. L. (1997) Nuclear histone acetylases and deacetylases and transcriptional regulation: HATs off to HDACs. Curr. Opin. Chem. Biol. 1, 300-308
    • (1997) Curr. Opin. Chem. Biol. , vol.1 , pp. 300-308
    • Hassig, C.A.1    Schreiber, S.L.2
  • 16
    • 69449102464 scopus 로고    scopus 로고
    • Genome-wide mapping of HATs and HDACs reveals distinct functions in active and inactive genes
    • Wang, Z., Zang, C., Cui, K., Schones, D. E., Barski, A., Peng, W., and Zhao, K. (2009) Genome-wide mapping of HATs and HDACs reveals distinct functions in active and inactive genes. Cell 138, 1019-1031
    • (2009) Cell , vol.138 , pp. 1019-1031
    • Wang, Z.1    Zang, C.2    Cui, K.3    Schones, D.E.4    Barski, A.5    Peng, W.6    Zhao, K.7
  • 17
    • 65449148715 scopus 로고    scopus 로고
    • A positive regulatory role for the mSin3A-HDAC complex in pluripotency through Nanog and Sox2
    • Baltus, G. A., Kowalski, M. P., Tutter, A. V., and Kadam, S. (2009) A positive regulatory role for the mSin3A-HDAC complex in pluripotency through Nanog and Sox2. J. Biol. Chem. 284, 6998-7006
    • (2009) J. Biol. Chem. , vol.284 , pp. 6998-7006
    • Baltus, G.A.1    Kowalski, M.P.2    Tutter, A.V.3    Kadam, S.4
  • 18
    • 77952348698 scopus 로고    scopus 로고
    • Histone deacetylase 1 (HDAC1), but not HDAC2, controls embryonic stem cell differentiation
    • Dovey, O. M., Foster, C. T., and Cowley, S. M. (2010) Histone deacetylase 1 (HDAC1), but not HDAC2, controls embryonic stem cell differentiation. Proc. Natl. Acad. Sci. U.S.A. 107, 8242-8247
    • (2010) Proc. Natl. Acad. Sci. U.S.A. , vol.107 , pp. 8242-8247
    • Dovey, O.M.1    Foster, C.T.2    Cowley, S.M.3
  • 19
  • 20
    • 1042302747 scopus 로고    scopus 로고
    • Histone deacetylase activity is required for embryonic stem cell differentiation
    • Lee, J. H., Hart, S. R., and Skalnik, D. G. (2004) Histone deacetylase activity is required for embryonic stem cell differentiation. Genesis 38, 32-38
    • (2004) Genesis , vol.38 , pp. 32-38
    • Lee, J.H.1    Hart, S.R.2    Skalnik, D.G.3
  • 24
    • 84861345298 scopus 로고    scopus 로고
    • Process engineering of human pluripotent stem cells for clinical application
    • Serra, M., Brito, C., Correia, C., and Alves, P. M. (2012) Process engineering of human pluripotent stem cells for clinical application. Trends Biotechnol. 30, 350-359
    • (2012) Trends Biotechnol. , vol.30 , pp. 350-359
    • Serra, M.1    Brito, C.2    Correia, C.3    Alves, P.M.4
  • 25
    • 67649604300 scopus 로고    scopus 로고
    • Epigenetic landscaping during hESC differentiation to neural cells
    • Golebiewska, A., Atkinson, S. P., Lako, M., and Armstrong, L. (2009) Epigenetic landscaping during hESC differentiation to neural cells. Stem Cells 27, 1298-1308
    • (2009) Stem Cells , vol.27 , pp. 1298-1308
    • Golebiewska, A.1    Atkinson, S.P.2    Lako, M.3    Armstrong, L.4
  • 26
    • 34547102737 scopus 로고    scopus 로고
    • Directed neural differentiation of human embryonic stem cells via an obligated primitive anterior stage
    • Pankratz, M. T., Li, X. J., Lavaute, T. M., Lyons, E. A., Chen, X., and Zhang, S. C. (2007) Directed neural differentiation of human embryonic stem cells via an obligated primitive anterior stage. Stem Cells 25, 1511-1520
    • (2007) Stem Cells , vol.25 , pp. 1511-1520
    • Pankratz, M.T.1    Li, X.J.2    Lavaute, T.M.3    Lyons, E.A.4    Chen, X.5    Zhang, S.C.6
  • 27
    • 65549110335 scopus 로고    scopus 로고
    • Different transcription factors regulate nestin gene expression during P19 cell neural differentiation and central nervous system development
    • Jin, Z., Liu, L., Bian, W., Chen, Y., Xu, G., Cheng, L., and Jing, N. (2009) Different transcription factors regulate nestin gene expression during P19 cell neural differentiation and central nervous system development. J. Biol. Chem. 284, 8160-8173
    • (2009) J. Biol. Chem. , vol.284 , pp. 8160-8173
    • Jin, Z.1    Liu, L.2    Bian, W.3    Chen, Y.4    Xu, G.5    Cheng, L.6    Jing, N.7
  • 28
    • 47749147258 scopus 로고    scopus 로고
    • Hydrogen peroxide promotes Abeta production through JNK-dependent activation of gamma-secretase
    • Shen, C., Chen, Y., Liu, H., Zhang, K., Zhang, T., Lin, A., and Jing, N. (2008) Hydrogen peroxide promotes Abeta production through JNK-dependent activation of gamma-secretase. J. Biol. Chem. 283, 17721-17730
    • (2008) J. Biol. Chem. , vol.283 , pp. 17721-17730
    • Shen, C.1    Chen, Y.2    Liu, H.3    Zhang, K.4    Zhang, T.5    Lin, A.6    Jing, N.7
  • 30
    • 77953299119 scopus 로고    scopus 로고
    • Distinct functions of BMP4 during different stages of mouse ES cell neural commitment
    • Zhang, K., Li, L., Huang, C., Shen, C., Tan, F., Xia, C., Liu, P., Rossant, J., and Jing, N. (2010) Distinct functions of BMP4 during different stages of mouse ES cell neural commitment. Development 137, 2095-2105
    • (2010) Development , vol.137 , pp. 2095-2105
    • Zhang, K.1    Li, L.2    Huang, C.3    Shen, C.4    Tan, F.5    Xia, C.6    Liu, P.7    Rossant, J.8    Jing, N.9
  • 32
    • 9444225935 scopus 로고    scopus 로고
    • Java Treeview: Extensible visualization of microarray data
    • Saldanha, A. J. (2004) Java Treeview: extensible visualization of microarray data. Bioinformatics 20, 3246-3248
    • (2004) Bioinformatics , vol.20 , pp. 3246-3248
    • Saldanha, A.J.1
  • 34
    • 84868551676 scopus 로고    scopus 로고
    • AP2γ regulates neural and epidermal development downstream of the BMP pathway at early stages of ectodermal patterning
    • Qiao, Y., Zhu, Y., Sheng, N., Chen, J., Tao, R., Zhu, Q., Zhang, T., Qian, C., and Jing, N. (2012) AP2γ regulates neural and epidermal development downstream of the BMP pathway at early stages of ectodermal patterning. Cell Res. 22, 1546-1561
    • (2012) Cell Res. , vol.22 , pp. 1546-1561
    • Qiao, Y.1    Zhu, Y.2    Sheng, N.3    Chen, J.4    Tao, R.5    Zhu, Q.6    Zhang, T.7    Qian, C.8    Jing, N.9
  • 35
    • 59749103021 scopus 로고    scopus 로고
    • Efficient gene knockdowns in human embryonic stem cells using lentiviral-based RNAi
    • Tulpule, A., and Daley, G. Q. (2009) Efficient gene knockdowns in human embryonic stem cells using lentiviral-based RNAi. Methods Mol. Biol. 482, 35-42
    • (2009) Methods Mol. Biol. , vol.482 , pp. 35-42
    • Tulpule, A.1    Daley, G.Q.2
  • 36
    • 25844465546 scopus 로고    scopus 로고
    • Differentiation of human embryonic stem cells to neural lineages in adherent culture by blocking bone morphogenetic protein signaling
    • Gerrard, L., Rodgers, L., and Cui, W. (2005) Differentiation of human embryonic stem cells to neural lineages in adherent culture by blocking bone morphogenetic protein signaling. Stem Cells 23, 1234-1241
    • (2005) Stem Cells , vol.23 , pp. 1234-1241
    • Gerrard, L.1    Rodgers, L.2    Cui, W.3
  • 37
    • 0035200623 scopus 로고    scopus 로고
    • In vitro differentiation of transplantable neural precursors from human embryonic stem cells
    • Zhang, S. C., Wernig, M., Duncan, I. D., Brüstle, O., and Thomson, J. A. (2001) In vitro differentiation of transplantable neural precursors from human embryonic stem cells. Nat. Biotechnol. 19, 1129-1133
    • (2001) Nat. Biotechnol. , vol.19 , pp. 1129-1133
    • Zhang, S.C.1    Wernig, M.2    Duncan, I.D.3    Brüstle, O.4    Thomson, J.A.5
  • 38
    • 62149125434 scopus 로고    scopus 로고
    • Highly efficient neural conversion of human ES and iPS cells by dual inhibition of SMAD signaling
    • Chambers, S. M., Fasano, C. A., Papapetrou, E. P., Tomishima, M., Sadelain, M., and Studer, L. (2009) Highly efficient neural conversion of human ES and iPS cells by dual inhibition of SMAD signaling. Nat. Biotechnol. 27, 275-280
    • (2009) Nat. Biotechnol. , vol.27 , pp. 275-280
    • Chambers, S.M.1    Fasano, C.A.2    Papapetrou, E.P.3    Tomishima, M.4    Sadelain, M.5    Studer, L.6
  • 40
    • 36749025207 scopus 로고    scopus 로고
    • Induction of a high population of neural stem cells with anterior neuroectoderm characters from epiblast-like P19 embryonic carcinoma cells
    • Xia, C., Wang, C., Zhang, K., Qian, C., and Jing, N. (2007) Induction of a high population of neural stem cells with anterior neuroectoderm characters from epiblast-like P19 embryonic carcinoma cells. Differentiation 75, 912-927
    • (2007) Differentiation , vol.75 , pp. 912-927
    • Xia, C.1    Wang, C.2    Zhang, K.3    Qian, C.4    Jing, N.5
  • 41
    • 0036211013 scopus 로고    scopus 로고
    • Histone acetylation: A switch between repressive and permissive chromatin: Second in review series on chromatin dynamics
    • Eberharter, A., and Becker, P. B. (2002) Histone acetylation: a switch between repressive and permissive chromatin: second in review series on chromatin dynamics. EMBO Rep. 3, 224-229
    • (2002) EMBO Rep. , vol.3 , pp. 224-229
    • Eberharter, A.1    Becker, P.B.2
  • 42
    • 0032030770 scopus 로고    scopus 로고
    • Histone acetylation and transcriptional regulatory mechanisms
    • Struhl, K. (1998) Histone acetylation and transcriptional regulatory mechanisms. Genes Dev. 12, 599-606
    • (1998) Genes Dev. , vol.12 , pp. 599-606
    • Struhl, K.1
  • 43
    • 84902603174 scopus 로고    scopus 로고
    • Coactivators p300 and CBP maintain the identity of mouse embryonic stem cells by mediating long-range chromatin structure
    • Fang, F., Xu, Y., Chew, K. K., Chen, X., Ng, H. H., and Matsudaira, P. (2014) Coactivators p300 and CBP maintain the identity of mouse embryonic stem cells by mediating long-range chromatin structure. Stem Cells 10.1002/stem.1705
    • (2014) Stem Cells
    • Fang, F.1    Xu, Y.2    Chew, K.K.3    Chen, X.4    Ng, H.H.5    Matsudaira, P.6
  • 44
    • 66149140599 scopus 로고    scopus 로고
    • Critical roles of coactivator p300 in mouse embryonic stem cell differentiation and Nanog expression
    • Zhong, X., and Jin, Y. (2009) Critical roles of coactivator p300 in mouse embryonic stem cell differentiation and Nanog expression. J. Biol. Chem. 284, 9168-9175
    • (2009) J. Biol. Chem. , vol.284 , pp. 9168-9175
    • Zhong, X.1    Jin, Y.2
  • 45
    • 4143098311 scopus 로고    scopus 로고
    • CBP and p300: HATs for different occasions
    • Kalkhoven, E. (2004) CBP and p300: HATs for different occasions. Biochem. Pharmacol. 68, 1145-1155
    • (2004) Biochem. Pharmacol. , vol.68 , pp. 1145-1155
    • Kalkhoven, E.1
  • 46
    • 34548530258 scopus 로고    scopus 로고
    • Linking genome structure and function through specific histone acetylation
    • Hansen, J. C. (2006) Linking genome structure and function through specific histone acetylation. ACS Chem. Biol. 1, 69-72
    • (2006) ACS Chem. Biol. , vol.1 , pp. 69-72
    • Hansen, J.C.1
  • 47
    • 80053900702 scopus 로고    scopus 로고
    • Pluripotency-related, valproic acid (VPA)-induced genome-wide histone H3 lysine 9 (H3K9) acetylation patterns in embryonic stem cells
    • Hezroni, H., Sailaja, B. S., and Meshorer, E. (2011) Pluripotency-related, valproic acid (VPA)-induced genome-wide histone H3 lysine 9 (H3K9) acetylation patterns in embryonic stem cells. J. Biol. Chem. 286, 35977-35988
    • (2011) J. Biol. Chem. , vol.286 , pp. 35977-35988
    • Hezroni, H.1    Sailaja, B.S.2    Meshorer, E.3
  • 48
    • 9344252804 scopus 로고    scopus 로고
    • Histone deacetylase inhibition-mediated neuronal differentiation of multipotent adult neural progenitor cells
    • Hsieh, J., Nakashima, K., Kuwabara, T., Mejia, E., and Gage, F. H. (2004) Histone deacetylase inhibition-mediated neuronal differentiation of multipotent adult neural progenitor cells. Proc. Natl. Acad. Sci. U.S.A. 101, 16659-16664
    • (2004) Proc. Natl. Acad. Sci. U.S.A. , vol.101 , pp. 16659-16664
    • Hsieh, J.1    Nakashima, K.2    Kuwabara, T.3    Mejia, E.4    Gage, F.H.5
  • 49
    • 34447343304 scopus 로고    scopus 로고
    • Effects of histone deacetylation inhibition on neuronal differentiation of embryonic mouse neural stem cells
    • Balasubramaniyan, V., Boddeke, E., Bakels, R., Küst, B., Kooistra, S., Veneman, A., and Copray, S. (2006) Effects of histone deacetylation inhibition on neuronal differentiation of embryonic mouse neural stem cells. Neuroscience 143, 939-951
    • (2006) Neuroscience , vol.143 , pp. 939-951
    • Balasubramaniyan, V.1    Boddeke, E.2    Bakels, R.3    Küst, B.4    Kooistra, S.5    Veneman, A.6    Copray, S.7
  • 50
    • 78649855297 scopus 로고    scopus 로고
    • Salt-inducible kinase 2 links transcriptional coactivator p300 phosphorylation to the prevention of ChREBP-dependent hepatic steatosis in mice
    • Bricambert, J., Miranda, J., Benhamed, F., Girard, J., Postic, C., and Dentin, R. (2010) Salt-inducible kinase 2 links transcriptional coactivator p300 phosphorylation to the prevention of ChREBP-dependent hepatic steatosis in mice. J. Clin. Invest. 120, 4316-4331
    • (2010) J. Clin. Invest. , vol.120 , pp. 4316-4331
    • Bricambert, J.1    Miranda, J.2    Benhamed, F.3    Girard, J.4    Postic, C.5    Dentin, R.6
  • 51
    • 79956367114 scopus 로고    scopus 로고
    • Dynamic acetylation of all lysine-4 trimethylated histone H3 is evolutionarily conserved and mediated by p300/CBP
    • Crump, N. T., Hazzalin, C. A., Bowers, E. M., Alani, R. M., Cole, P. A., and Mahadevan, L. C. (2011) Dynamic acetylation of all lysine-4 trimethylated histone H3 is evolutionarily conserved and mediated by p300/CBP. Proc. Natl. Acad. Sci. U.S.A. 108, 7814-7819
    • (2011) Proc. Natl. Acad. Sci. U.S.A. , vol.108 , pp. 7814-7819
    • Crump, N.T.1    Hazzalin, C.A.2    Bowers, E.M.3    Alani, R.M.4    Cole, P.A.5    Mahadevan, L.C.6
  • 52
    • 78751611793 scopus 로고    scopus 로고
    • Distinct roles of GCN5/PCAF-mediated H3K9ac and CBP/p300-mediated H3K18/27ac in nuclear receptor transactivation
    • Jin, Q., Yu, L. R., Wang, L., Zhang, Z., Kasper, L. H., Lee, J. E., Wang, C., Brindle, P. K., Dent, S. Y., and Ge, K. (2011) Distinct roles of GCN5/PCAF-mediated H3K9ac and CBP/p300-mediated H3K18/27ac in nuclear receptor transactivation. EMBO J. 30, 249-262
    • (2011) EMBO J. , vol.30 , pp. 249-262
    • Jin, Q.1    Yu, L.R.2    Wang, L.3    Zhang, Z.4    Kasper, L.H.5    Lee, J.E.6    Wang, C.7    Brindle, P.K.8    Dent, S.Y.9    Ge, K.10
  • 53
    • 67349190247 scopus 로고    scopus 로고
    • Linking DNA methylation and histone modification: Patterns and paradigms
    • Cedar, H., and Bergman, Y. (2009) Linking DNA methylation and histone modification: patterns and paradigms. Nat. Rev. Genet. 10, 295-304
    • (2009) Nat. Rev. Genet. , vol.10 , pp. 295-304
    • Cedar, H.1    Bergman, Y.2
  • 54
    • 0032488855 scopus 로고    scopus 로고
    • Eukaryotic transcription: An interlaced network of transcription factors and chromatin-modifying machines
    • Kadonaga, J. T. (1998) Eukaryotic transcription: an interlaced network of transcription factors and chromatin-modifying machines. Cell 92, 307-313
    • (1998) Cell , vol.92 , pp. 307-313
    • Kadonaga, J.T.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.