-
1
-
-
84862276328
-
Structure, function and diversity of the healthy human microbiome
-
Structure, function and diversity of the healthy human microbiome. Nature 2012, 486:207-214. Human Microbiome Project Consortium.
-
(2012)
Nature
, vol.486
, pp. 207-214
-
-
-
2
-
-
84862286169
-
A framework for human microbiome research
-
A framework for human microbiome research. Nature 2012, 486:215-221. Human Microbiome Project Consortium.
-
(2012)
Nature
, vol.486
, pp. 215-221
-
-
-
3
-
-
77649086402
-
Immune adaptations that maintain homeostasis with the intestinal microbiota
-
Hooper L.V., Macpherson A.J. Immune adaptations that maintain homeostasis with the intestinal microbiota. Nat. Rev. Immunol. 2010, 10:159-169.
-
(2010)
Nat. Rev. Immunol.
, vol.10
, pp. 159-169
-
-
Hooper, L.V.1
Macpherson, A.J.2
-
4
-
-
84901050860
-
Gut microbiota-generated metabolites in animal health and disease
-
Lee W.J., Hase K. Gut microbiota-generated metabolites in animal health and disease. Nat. Chem. Biol. 2014, 10:416-424.
-
(2014)
Nat. Chem. Biol.
, vol.10
, pp. 416-424
-
-
Lee, W.J.1
Hase, K.2
-
5
-
-
84856098171
-
Role of mucus layers in gut infection and inflammation
-
Hansson G.C. Role of mucus layers in gut infection and inflammation. Curr. Opin. Microbiol. 2012, 15:57-62.
-
(2012)
Curr. Opin. Microbiol.
, vol.15
, pp. 57-62
-
-
Hansson, G.C.1
-
6
-
-
84914176663
-
Cooperativity among secretory IgA, the polymeric immunoglobulin receptor, and the gut microbiota promotes host-microbial mutualism
-
Kaetzel C.S. Cooperativity among secretory IgA, the polymeric immunoglobulin receptor, and the gut microbiota promotes host-microbial mutualism. Immunol. Lett. 2014, 10.1016/j.imlet.2014.05.008.
-
(2014)
Immunol. Lett.
-
-
Kaetzel, C.S.1
-
7
-
-
84888858078
-
Dysbiosis - a consequence of Paneth cell dysfunction
-
Salzman N.H., Bevins C.L. Dysbiosis - a consequence of Paneth cell dysfunction. Semin. Immunol. 2013, 25:334-341.
-
(2013)
Semin. Immunol.
, vol.25
, pp. 334-341
-
-
Salzman, N.H.1
Bevins, C.L.2
-
8
-
-
84863920287
-
Microbial interactions: from networks to models
-
Faust K., Raes J. Microbial interactions: from networks to models. Nat. Rev. Microbiol. 2012, 10:538-550.
-
(2012)
Nat. Rev. Microbiol.
, vol.10
, pp. 538-550
-
-
Faust, K.1
Raes, J.2
-
9
-
-
76749110853
-
Transitions in oral and intestinal microflora composition and innate immune receptor-dependent stimulation during mouse development
-
Hasegawa M., et al. Transitions in oral and intestinal microflora composition and innate immune receptor-dependent stimulation during mouse development. Infect. Immun. 2010, 78:639-650.
-
(2010)
Infect. Immun.
, vol.78
, pp. 639-650
-
-
Hasegawa, M.1
-
10
-
-
84875851340
-
Development of intestinal microbiota in infants and its impact on health
-
Matamoros S., et al. Development of intestinal microbiota in infants and its impact on health. Trends Microbiol. 2013, 21:167-173.
-
(2013)
Trends Microbiol.
, vol.21
, pp. 167-173
-
-
Matamoros, S.1
-
11
-
-
84883057637
-
Dietary intervention impact on gut microbial gene richness
-
Cotillard A., et al. Dietary intervention impact on gut microbial gene richness. Nature 2013, 500:585-588.
-
(2013)
Nature
, vol.500
, pp. 585-588
-
-
Cotillard, A.1
-
12
-
-
33644828006
-
Reduced enterobacterial and increased staphylococcal colonization of the infantile bowel: an effect of hygienic lifestyle?
-
Adlerberth I., et al. Reduced enterobacterial and increased staphylococcal colonization of the infantile bowel: an effect of hygienic lifestyle?. Pediatr. Res. 2006, 59:96-101.
-
(2006)
Pediatr. Res.
, vol.59
, pp. 96-101
-
-
Adlerberth, I.1
-
13
-
-
0021228694
-
The intestinal microflora of infants: composition of fecal flora in breast-fed and bottle-fed infants
-
Benno Y., et al. The intestinal microflora of infants: composition of fecal flora in breast-fed and bottle-fed infants. Microbiol. Immunol. 1984, 28:975-986.
-
(1984)
Microbiol. Immunol.
, vol.28
, pp. 975-986
-
-
Benno, Y.1
-
14
-
-
0030032123
-
Digestion and physiological properties of resistant starch in the human large bowel
-
Cummings J.H., et al. Digestion and physiological properties of resistant starch in the human large bowel. Br. J. Nutr. 1996, 75:733-747.
-
(1996)
Br. J. Nutr.
, vol.75
, pp. 733-747
-
-
Cummings, J.H.1
-
15
-
-
84884411052
-
Bacterial colonization factors control specificity and stability of the gut microbiota
-
Lee S.M., et al. Bacterial colonization factors control specificity and stability of the gut microbiota. Nature 2013, 501:426-429.
-
(2013)
Nature
, vol.501
, pp. 426-429
-
-
Lee, S.M.1
-
16
-
-
84885573828
-
Microbiota-liberated host sugars facilitate post-antibiotic expansion of enteric pathogens
-
Ng K.M., et al. Microbiota-liberated host sugars facilitate post-antibiotic expansion of enteric pathogens. Nature 2013, 502:96-99.
-
(2013)
Nature
, vol.502
, pp. 96-99
-
-
Ng, K.M.1
-
17
-
-
84859925158
-
How glycan metabolism shapes the human gut microbiota
-
Koropatkin N.M., et al. How glycan metabolism shapes the human gut microbiota. Nat. Rev. Microbiol. 2012, 10:323-335.
-
(2012)
Nat. Rev. Microbiol.
, vol.10
, pp. 323-335
-
-
Koropatkin, N.M.1
-
18
-
-
0027409663
-
The dependence of the in vitro fermentation of dietary fibre to short-chain fatty acids on the contents of soluble non-starch polysaccharides
-
Mortensen P.B., Nordgaard-Andersen i The dependence of the in vitro fermentation of dietary fibre to short-chain fatty acids on the contents of soluble non-starch polysaccharides. Scand. J. Gastroenterol. 1993, 28:418-422.
-
(1993)
Scand. J. Gastroenterol.
, vol.28
, pp. 418-422
-
-
Mortensen, P.B.1
Nordgaard-Andersen, I.2
-
19
-
-
78649734540
-
Resistant starches types 2 and 4 have differential effects on the composition of the fecal microbiota in human subjects
-
Martinez I., et al. Resistant starches types 2 and 4 have differential effects on the composition of the fecal microbiota in human subjects. PLoS ONE 2010, 5:e15046.
-
(2010)
PLoS ONE
, vol.5
-
-
Martinez, I.1
-
20
-
-
78751580602
-
Dominant and diet-responsive groups of bacteria within the human colonic microbiota
-
Walker A.W., et al. Dominant and diet-responsive groups of bacteria within the human colonic microbiota. ISME J. 2011, 5:220-230.
-
(2011)
ISME J.
, vol.5
, pp. 220-230
-
-
Walker, A.W.1
-
21
-
-
80053618114
-
Linking long-term dietary patterns with gut microbial enterotypes
-
Wu G.D., et al. Linking long-term dietary patterns with gut microbial enterotypes. Science 2011, 334:105-108.
-
(2011)
Science
, vol.334
, pp. 105-108
-
-
Wu, G.D.1
-
22
-
-
84892828465
-
Diet rapidly and reproducibly alters the human gut microbiome
-
David L.A., et al. Diet rapidly and reproducibly alters the human gut microbiome. Nature 2014, 505:559-563.
-
(2014)
Nature
, vol.505
, pp. 559-563
-
-
David, L.A.1
-
23
-
-
77957075815
-
Impact of diet in shaping gut microbiota revealed by a comparative study in children from Europe and rural Africa
-
De Filippo C., et al. Impact of diet in shaping gut microbiota revealed by a comparative study in children from Europe and rural Africa. Proc. Natl. Acad. Sci. U.S.A. 2010, 107:14691-14696.
-
(2010)
Proc. Natl. Acad. Sci. U.S.A.
, vol.107
, pp. 14691-14696
-
-
De Filippo, C.1
-
24
-
-
33749997498
-
Reciprocal gut microbiota transplants from zebrafish and mice to germ-free recipients reveal host habitat selection
-
Rawls J.F., et al. Reciprocal gut microbiota transplants from zebrafish and mice to germ-free recipients reveal host habitat selection. Cell 2006, 127:423-433.
-
(2006)
Cell
, vol.127
, pp. 423-433
-
-
Rawls, J.F.1
-
25
-
-
0036135946
-
Molecular monitoring of succession of bacterial communities in human neonates
-
Favier C.F., et al. Molecular monitoring of succession of bacterial communities in human neonates. Appl. Environ. Microbiol. 2002, 68:219-226.
-
(2002)
Appl. Environ. Microbiol.
, vol.68
, pp. 219-226
-
-
Favier, C.F.1
-
26
-
-
0034076597
-
Analysis of intestinal flora development in breast-fed and formula-fed infants by using molecular identification and detection methods
-
Harmsen H.J., et al. Analysis of intestinal flora development in breast-fed and formula-fed infants by using molecular identification and detection methods. J. Pediatr. Gastroenterol. Nutr. 2000, 30:61-67.
-
(2000)
J. Pediatr. Gastroenterol. Nutr.
, vol.30
, pp. 61-67
-
-
Harmsen, H.J.1
-
27
-
-
67651151152
-
The Firmicutes/Bacteroidetes ratio of the human microbiota changes with age
-
Mariat D., et al. The Firmicutes/Bacteroidetes ratio of the human microbiota changes with age. BMC Microbiol. 2009, 9:123.
-
(2009)
BMC Microbiol.
, vol.9
, pp. 123
-
-
Mariat, D.1
-
28
-
-
79960838654
-
Bifidobacterial utilization of human milk oligosaccharides
-
Sela D.A. Bifidobacterial utilization of human milk oligosaccharides. Int. J. Food Microbiol. 2011, 149:58-64.
-
(2011)
Int. J. Food Microbiol.
, vol.149
, pp. 58-64
-
-
Sela, D.A.1
-
29
-
-
79953329975
-
An infant-associated bacterial commensal utilizes breast milk sialyloligosaccharides
-
Sela D.A., et al. An infant-associated bacterial commensal utilizes breast milk sialyloligosaccharides. J. Biol. Chem. 2011, 286:11909-11918.
-
(2011)
J. Biol. Chem.
, vol.286
, pp. 11909-11918
-
-
Sela, D.A.1
-
30
-
-
78650365846
-
Milk sialyllactose influences colitis in mice through selective intestinal bacterial colonization
-
Fuhrer A., et al. Milk sialyllactose influences colitis in mice through selective intestinal bacterial colonization. J. Exp. Med. 2010, 207:2843-2854.
-
(2010)
J. Exp. Med.
, vol.207
, pp. 2843-2854
-
-
Fuhrer, A.1
-
31
-
-
65249149643
-
Characterizing a model human gut microbiota composed of members of its two dominant bacterial phyla
-
Mahowald M.A., et al. Characterizing a model human gut microbiota composed of members of its two dominant bacterial phyla. Proc. Natl. Acad. Sci. U.S.A. 2009, 106:5859-5864.
-
(2009)
Proc. Natl. Acad. Sci. U.S.A.
, vol.106
, pp. 5859-5864
-
-
Mahowald, M.A.1
-
32
-
-
84877913270
-
Bacteroides thetaiotaomicron and Faecalibacterium prausnitzii influence the production of mucus glycans and the development of goblet cells in the colonic epithelium of a gnotobiotic model rodent
-
Wrzosek L., et al. Bacteroides thetaiotaomicron and Faecalibacterium prausnitzii influence the production of mucus glycans and the development of goblet cells in the colonic epithelium of a gnotobiotic model rodent. BMC Biol. 2013, 11:61.
-
(2013)
BMC Biol.
, vol.11
, pp. 61
-
-
Wrzosek, L.1
-
33
-
-
84891789294
-
An ecological network of polysaccharide utilization among human intestinal symbionts
-
Rakoff-Nahoum S., et al. An ecological network of polysaccharide utilization among human intestinal symbionts. Curr. Biol. 2014, 24:40-49.
-
(2014)
Curr. Biol.
, vol.24
, pp. 40-49
-
-
Rakoff-Nahoum, S.1
-
34
-
-
78449296237
-
Individuality in gut microbiota composition is a complex polygenic trait shaped by multiple environmental and host genetic factors
-
Benson A.K., et al. Individuality in gut microbiota composition is a complex polygenic trait shaped by multiple environmental and host genetic factors. Proc. Natl. Acad. Sci. U.S.A. 2010, 107:18933-18938.
-
(2010)
Proc. Natl. Acad. Sci. U.S.A.
, vol.107
, pp. 18933-18938
-
-
Benson, A.K.1
-
35
-
-
20544444045
-
Diversity of the human intestinal microbial flora
-
Eckburg P.B., et al. Diversity of the human intestinal microbial flora. Science 2005, 308:1635-1638.
-
(2005)
Science
, vol.308
, pp. 1635-1638
-
-
Eckburg, P.B.1
-
36
-
-
79953025268
-
Spatial organization of intestinal microbiota in the mouse ascending colon
-
Nava G.M., et al. Spatial organization of intestinal microbiota in the mouse ascending colon. ISME J. 2011, 5:627-638.
-
(2011)
ISME J.
, vol.5
, pp. 627-638
-
-
Nava, G.M.1
-
37
-
-
85027927719
-
Enterotypes of the human gut microbiome
-
Arumugam M., et al. Enterotypes of the human gut microbiome. Nature 2011, 473:174-180.
-
(2011)
Nature
, vol.473
, pp. 174-180
-
-
Arumugam, M.1
-
38
-
-
79957574938
-
Moving pictures of the human microbiome
-
Caporaso J.G., et al. Moving pictures of the human microbiome. Genome Biol. 2011, 12:R50.
-
(2011)
Genome Biol.
, vol.12
, pp. R50
-
-
Caporaso, J.G.1
-
39
-
-
67650076454
-
Prolonged impact of antibiotics on intestinal microbial ecology and susceptibility to enteric Salmonella infection
-
Croswell A., et al. Prolonged impact of antibiotics on intestinal microbial ecology and susceptibility to enteric Salmonella infection. Infect. Immun. 2009, 77:2741-2753.
-
(2009)
Infect. Immun.
, vol.77
, pp. 2741-2753
-
-
Croswell, A.1
-
40
-
-
84860668802
-
Lethal inflammasome activation by a multidrug-resistant pathobiont upon antibiotic disruption of the microbiota
-
Ayres J.S., et al. Lethal inflammasome activation by a multidrug-resistant pathobiont upon antibiotic disruption of the microbiota. Nat. Med. 2012, 18:799-806.
-
(2012)
Nat. Med.
, vol.18
, pp. 799-806
-
-
Ayres, J.S.1
-
41
-
-
77952742099
-
Modulation of Shigella virulence in response to available oxygen in vivo
-
Marteyn B., et al. Modulation of Shigella virulence in response to available oxygen in vivo. Nature 2010, 465:355-358.
-
(2010)
Nature
, vol.465
, pp. 355-358
-
-
Marteyn, B.1
-
42
-
-
0026078596
-
Short-chain organic acids at pH 5.0 kill Escherichia coli and Salmonella spp. without causing membrane perturbation
-
Cherrington C.A., et al. Short-chain organic acids at pH 5.0 kill Escherichia coli and Salmonella spp. without causing membrane perturbation. J. Appl. Bacteriol. 1991, 70:161-165.
-
(1991)
J. Appl. Bacteriol.
, vol.70
, pp. 161-165
-
-
Cherrington, C.A.1
-
43
-
-
79251584066
-
Bifidobacteria can protect from enteropathogenic infection through production of acetate
-
Fukuda S., et al. Bifidobacteria can protect from enteropathogenic infection through production of acetate. Nature 2011, 469:543-547.
-
(2011)
Nature
, vol.469
, pp. 543-547
-
-
Fukuda, S.1
-
44
-
-
0036178027
-
Influence of intestinal anaerobes and organic acids on the growth of enterohaemorrhagic Escherichia coli O157:H7
-
Shin R., et al. Influence of intestinal anaerobes and organic acids on the growth of enterohaemorrhagic Escherichia coli O157:H7. J. Med. Microbiol. 2002, 51:201-206.
-
(2002)
J. Med. Microbiol.
, vol.51
, pp. 201-206
-
-
Shin, R.1
-
45
-
-
33644867989
-
Butyrate specifically down-regulates Salmonella pathogenicity island 1 gene expression
-
Gantois I., et al. Butyrate specifically down-regulates Salmonella pathogenicity island 1 gene expression. Appl. Environ. Microbiol. 2006, 72:946-949.
-
(2006)
Appl. Environ. Microbiol.
, vol.72
, pp. 946-949
-
-
Gantois, I.1
-
46
-
-
84872488958
-
Bacteriocins - a viable alternative to antibiotics?
-
Cotter P.D., et al. Bacteriocins - a viable alternative to antibiotics?. Nat. Rev. Microbiol. 2013, 11:95-105.
-
(2013)
Nat. Rev. Microbiol.
, vol.11
, pp. 95-105
-
-
Cotter, P.D.1
-
47
-
-
0036718637
-
Selection of recently isolated colicinogenic Escherichia coli strains inhibitory to Escherichia coli O157:H7
-
Schamberger G.P., Diez-Gonzalez F. Selection of recently isolated colicinogenic Escherichia coli strains inhibitory to Escherichia coli O157:H7. J. Food Prot. 2002, 65:1381-1387.
-
(2002)
J. Food Prot.
, vol.65
, pp. 1381-1387
-
-
Schamberger, G.P.1
Diez-Gonzalez, F.2
-
48
-
-
40749150035
-
Comparison of carbon nutrition for pathogenic and commensal Escherichia coli strains in the mouse intestine
-
Fabich A.J., et al. Comparison of carbon nutrition for pathogenic and commensal Escherichia coli strains in the mouse intestine. Infect. Immun. 2008, 76:1143-1152.
-
(2008)
Infect. Immun.
, vol.76
, pp. 1143-1152
-
-
Fabich, A.J.1
-
49
-
-
84861972274
-
Regulated virulence controls the ability of a pathogen to compete with the gut microbiota
-
Kamada N., et al. Regulated virulence controls the ability of a pathogen to compete with the gut microbiota. Science 2012, 336:1325-1329.
-
(2012)
Science
, vol.336
, pp. 1325-1329
-
-
Kamada, N.1
-
50
-
-
53649098280
-
Vancomycin-resistant enterococci exploit antibiotic-induced innate immune deficits
-
Brandl K., et al. Vancomycin-resistant enterococci exploit antibiotic-induced innate immune deficits. Nature 2008, 455:804-807.
-
(2008)
Nature
, vol.455
, pp. 804-807
-
-
Brandl, K.1
-
51
-
-
78149317654
-
The microbiota mediates pathogen clearance from the gut lumen after non-typhoidal Salmonella diarrhea
-
Endt K., et al. The microbiota mediates pathogen clearance from the gut lumen after non-typhoidal Salmonella diarrhea. PLoS Pathog. 2010, 6:e1001097.
-
(2010)
PLoS Pathog.
, vol.6
-
-
Endt, K.1
-
52
-
-
84863719891
-
Long-term follow-up of colonoscopic fecal microbiota transplant for recurrent Clostridium difficile infection
-
Brandt L.J., et al. Long-term follow-up of colonoscopic fecal microbiota transplant for recurrent Clostridium difficile infection. Am. J. Gastroenterol. 2012, 107:1079-1087.
-
(2012)
Am. J. Gastroenterol.
, vol.107
, pp. 1079-1087
-
-
Brandt, L.J.1
-
53
-
-
84892894991
-
Antibiotic-induced shifts in the mouse gut microbiome and metabolome increase susceptibility to Clostridium difficile infection
-
Theriot C.M., et al. Antibiotic-induced shifts in the mouse gut microbiome and metabolome increase susceptibility to Clostridium difficile infection. Nat. Commun. 2014, 5:3114.
-
(2014)
Nat. Commun.
, vol.5
, pp. 3114
-
-
Theriot, C.M.1
-
54
-
-
79956078164
-
Commensal Bacteroides species induce colitis in host-genotype-specific fashion in a mouse model of inflammatory bowel disease
-
Bloom S.M., et al. Commensal Bacteroides species induce colitis in host-genotype-specific fashion in a mouse model of inflammatory bowel disease. Cell Host Microbe 2011, 9:390-403.
-
(2011)
Cell Host Microbe
, vol.9
, pp. 390-403
-
-
Bloom, S.M.1
-
55
-
-
77956569409
-
Enterobacteriaceae act in concert with the gut microbiota to induce spontaneous and maternally transmitted colitis
-
Garrett W.S., et al. Enterobacteriaceae act in concert with the gut microbiota to induce spontaneous and maternally transmitted colitis. Cell Host Microbe 2010, 8:292-300.
-
(2010)
Cell Host Microbe
, vol.8
, pp. 292-300
-
-
Garrett, W.S.1
-
56
-
-
84890297415
-
Microbiota-derived hydrogen fuels Salmonella typhimurium invasion of the gut ecosystem
-
Maier L., et al. Microbiota-derived hydrogen fuels Salmonella typhimurium invasion of the gut ecosystem. Cell Host Microbe 2013, 14:641-651.
-
(2013)
Cell Host Microbe
, vol.14
, pp. 641-651
-
-
Maier, L.1
-
57
-
-
77957157893
-
Gut inflammation provides a respiratory electron acceptor for Salmonella
-
Winter S.E., et al. Gut inflammation provides a respiratory electron acceptor for Salmonella. Nature 2010, 467:426-429.
-
(2010)
Nature
, vol.467
, pp. 426-429
-
-
Winter, S.E.1
-
58
-
-
0032718594
-
Detoxification of hydrogen sulfide and methanethiol in the cecal mucosa
-
Levitt M.D., et al. Detoxification of hydrogen sulfide and methanethiol in the cecal mucosa. J. Clin. Invest. 1999, 104:1107-1114.
-
(1999)
J. Clin. Invest.
, vol.104
, pp. 1107-1114
-
-
Levitt, M.D.1
-
59
-
-
84896092821
-
The treatment-naive microbiome in new-onset Crohn's disease
-
Gevers D., et al. The treatment-naive microbiome in new-onset Crohn's disease. Cell Host Microbe 2014, 15:382-392.
-
(2014)
Cell Host Microbe
, vol.15
, pp. 382-392
-
-
Gevers, D.1
-
60
-
-
84866549438
-
Dysfunction of the intestinal microbiome in inflammatory bowel disease and treatment
-
Morgan X.C., et al. Dysfunction of the intestinal microbiome in inflammatory bowel disease and treatment. Genome Biol. 2012, 13:R79.
-
(2012)
Genome Biol.
, vol.13
, pp. R79
-
-
Morgan, X.C.1
-
61
-
-
84872494091
-
Immunohistochemical search for viral and bacterial antigens in Crohn's disease
-
Magin W.S., et al. Immunohistochemical search for viral and bacterial antigens in Crohn's disease. J. Crohns Colitis 2013, 7:161-166.
-
(2013)
J. Crohns Colitis
, vol.7
, pp. 161-166
-
-
Magin, W.S.1
-
62
-
-
84859795928
-
Characterization of adherent-invasive Escherichia coli isolated from pediatric patients with inflammatory bowel disease
-
Negroni A., et al. Characterization of adherent-invasive Escherichia coli isolated from pediatric patients with inflammatory bowel disease. Inflamm. Bowel Dis. 2012, 18:913-924.
-
(2012)
Inflamm. Bowel Dis.
, vol.18
, pp. 913-924
-
-
Negroni, A.1
-
63
-
-
84873513423
-
Host-derived nitrate boosts growth of E. coli in the inflamed gut
-
Winter S.E., et al. Host-derived nitrate boosts growth of E. coli in the inflamed gut. Science 2013, 339:708-711.
-
(2013)
Science
, vol.339
, pp. 708-711
-
-
Winter, S.E.1
-
64
-
-
44349195660
-
The regulation of IgA class switching
-
Cerutti A. The regulation of IgA class switching. Nat. Rev. Immunol. 2008, 8:421-434.
-
(2008)
Nat. Rev. Immunol.
, vol.8
, pp. 421-434
-
-
Cerutti, A.1
-
65
-
-
0018092512
-
Increase in the population of duodenal immunoglobulin A plasmocytes in axenic mice associated with different living or dead bacterial strains of intestinal origin
-
Moreau M.C., et al. Increase in the population of duodenal immunoglobulin A plasmocytes in axenic mice associated with different living or dead bacterial strains of intestinal origin. Infect. Immun. 1978, 21:532-539.
-
(1978)
Infect. Immun.
, vol.21
, pp. 532-539
-
-
Moreau, M.C.1
-
66
-
-
77954051526
-
Reversible microbial colonization of germ-free mice reveals the dynamics of IgA immune responses
-
Hapfelmeier S., et al. Reversible microbial colonization of germ-free mice reveals the dynamics of IgA immune responses. Science 2010, 328:1705-1709.
-
(2010)
Science
, vol.328
, pp. 1705-1709
-
-
Hapfelmeier, S.1
-
67
-
-
1542618118
-
Induction of protective IgA by intestinal dendritic cells carrying commensal bacteria
-
Macpherson A.J., Uhr T. Induction of protective IgA by intestinal dendritic cells carrying commensal bacteria. Science 2004, 303:1662-1665.
-
(2004)
Science
, vol.303
, pp. 1662-1665
-
-
Macpherson, A.J.1
Uhr, T.2
-
68
-
-
84883741301
-
Microbial colonization influences early B-lineage development in the gut lamina propria
-
Wesemann D.R., et al. Microbial colonization influences early B-lineage development in the gut lamina propria. Nature 2013, 501:112-115.
-
(2013)
Nature
, vol.501
, pp. 112-115
-
-
Wesemann, D.R.1
-
69
-
-
77952198029
-
T cell-dependent and -independent IgA responses: role of TLR signalling
-
Bessa J., Bachmann M.F. T cell-dependent and -independent IgA responses: role of TLR signalling. Immunol. Invest. 2010, 39:407-428.
-
(2010)
Immunol. Invest.
, vol.39
, pp. 407-428
-
-
Bessa, J.1
Bachmann, M.F.2
-
70
-
-
0033523608
-
Absence of epithelial immunoglobulin A transport, with increased mucosal leakiness, in polymeric immunoglobulin receptor/secretory component-deficient mice
-
Johansen F.E., et al. Absence of epithelial immunoglobulin A transport, with increased mucosal leakiness, in polymeric immunoglobulin receptor/secretory component-deficient mice. J. Exp. Med. 1999, 190:915-922.
-
(1999)
J. Exp. Med.
, vol.190
, pp. 915-922
-
-
Johansen, F.E.1
-
71
-
-
79951602552
-
Mice carrying a knock-in mutation of Aicda resulting in a defect in somatic hypermutation have impaired gut homeostasis and compromised mucosal defense
-
Wei M., et al. Mice carrying a knock-in mutation of Aicda resulting in a defect in somatic hypermutation have impaired gut homeostasis and compromised mucosal defense. Nat. Immunol. 2011, 12:264-270.
-
(2011)
Nat. Immunol.
, vol.12
, pp. 264-270
-
-
Wei, M.1
-
72
-
-
84904384753
-
+ T cells regulate immunoglobulin A selection and facilitate diversification of bacterial species responsible for immune homeostasis
-
+ T cells regulate immunoglobulin A selection and facilitate diversification of bacterial species responsible for immune homeostasis. Immunity 2014, 41:152-165.
-
(2014)
Immunity
, vol.41
, pp. 152-165
-
-
Kawamoto, S.1
-
73
-
-
84862862332
-
Epithelial antimicrobial defence of the skin and intestine
-
Gallo R.L., Hooper L.V. Epithelial antimicrobial defence of the skin and intestine. Nat. Rev. Immunol. 2012, 12:503-516.
-
(2012)
Nat. Rev. Immunol.
, vol.12
, pp. 503-516
-
-
Gallo, R.L.1
Hooper, L.V.2
-
74
-
-
33748039462
-
Symbiotic bacteria direct expression of an intestinal bactericidal lectin
-
Cash H.L., et al. Symbiotic bacteria direct expression of an intestinal bactericidal lectin. Science 2006, 313:1126-1130.
-
(2006)
Science
, vol.313
, pp. 1126-1130
-
-
Cash, H.L.1
-
75
-
-
0025021992
-
Antimicrobial defensin peptides form voltage-dependent ion-permeable channels in planar lipid bilayer membranes
-
Kagan B.L., et al. Antimicrobial defensin peptides form voltage-dependent ion-permeable channels in planar lipid bilayer membranes. Proc. Natl. Acad. Sci. U.S.A. 1990, 87:210-214.
-
(1990)
Proc. Natl. Acad. Sci. U.S.A.
, vol.87
, pp. 210-214
-
-
Kagan, B.L.1
-
76
-
-
0033794504
-
Genetic and functional analysis of a PmrA-PmrB-regulated locus necessary for lipopolysaccharide modification, antimicrobial peptide resistance, and oral virulence of Salmonella enterica serovar Typhimurium
-
Gunn J.S., et al. Genetic and functional analysis of a PmrA-PmrB-regulated locus necessary for lipopolysaccharide modification, antimicrobial peptide resistance, and oral virulence of Salmonella enterica serovar Typhimurium. Infect. Immun. 2000, 68:6139-6146.
-
(2000)
Infect. Immun.
, vol.68
, pp. 6139-6146
-
-
Gunn, J.S.1
-
77
-
-
0035126317
-
Downregulation of bactericidal peptides in enteric infections: a novel immune escape mechanism with bacterial DNA as a potential regulator
-
Islam D., et al. Downregulation of bactericidal peptides in enteric infections: a novel immune escape mechanism with bacterial DNA as a potential regulator. Nat. Med. 2001, 7:180-185.
-
(2001)
Nat. Med.
, vol.7
, pp. 180-185
-
-
Islam, D.1
-
78
-
-
0032734313
-
Expression and regulation of the human beta-defensins hBD-1 and hBD-2 in intestinal epithelium
-
O'Neil D.A., et al. Expression and regulation of the human beta-defensins hBD-1 and hBD-2 in intestinal epithelium. J. Immunol. 1999, 163:6718-6724.
-
(1999)
J. Immunol.
, vol.163
, pp. 6718-6724
-
-
O'Neil, D.A.1
-
79
-
-
0037340434
-
Angiogenins: a new class of microbicidal proteins involved in innate immunity
-
Hooper L.V., et al. Angiogenins: a new class of microbicidal proteins involved in innate immunity. Nat. Immunol. 2003, 4:269-273.
-
(2003)
Nat. Immunol.
, vol.4
, pp. 269-273
-
-
Hooper, L.V.1
-
80
-
-
84873911271
-
Bacteria regulate intestinal epithelial cell differentiation factors both in vitro and in vivo
-
Becker S., et al. Bacteria regulate intestinal epithelial cell differentiation factors both in vitro and in vivo. PLoS ONE 2013, 8:e55620.
-
(2013)
PLoS ONE
, vol.8
-
-
Becker, S.1
-
81
-
-
34547762705
-
MyD88-mediated signals induce the bactericidal lectin RegIII gamma and protect mice against intestinal Listeria monocytogenes infection
-
Brandl K., et al. MyD88-mediated signals induce the bactericidal lectin RegIII gamma and protect mice against intestinal Listeria monocytogenes infection. J. Exp. Med. 2007, 204:1891-1900.
-
(2007)
J. Exp. Med.
, vol.204
, pp. 1891-1900
-
-
Brandl, K.1
-
82
-
-
58549111588
-
Paneth cells directly sense gut commensals and maintain homeostasis at the intestinal host-microbial interface
-
Vaishnava S., et al. Paneth cells directly sense gut commensals and maintain homeostasis at the intestinal host-microbial interface. Proc. Natl. Acad. Sci. U.S.A. 2008, 105:20858-20863.
-
(2008)
Proc. Natl. Acad. Sci. U.S.A.
, vol.105
, pp. 20858-20863
-
-
Vaishnava, S.1
-
83
-
-
80054122238
-
The antibacterial lectin RegIIIgamma promotes the spatial segregation of microbiota and host in the intestine
-
Vaishnava S., et al. The antibacterial lectin RegIIIgamma promotes the spatial segregation of microbiota and host in the intestine. Science 2011, 334:255-258.
-
(2011)
Science
, vol.334
, pp. 255-258
-
-
Vaishnava, S.1
-
84
-
-
70349468054
-
Nod2 is required for the regulation of commensal microbiota in the intestine
-
Petnicki-Ocwieja T., et al. Nod2 is required for the regulation of commensal microbiota in the intestine. Proc. Natl. Acad. Sci. U.S.A. 2009, 106:15813-15818.
-
(2009)
Proc. Natl. Acad. Sci. U.S.A.
, vol.106
, pp. 15813-15818
-
-
Petnicki-Ocwieja, T.1
-
85
-
-
0038523850
-
Expression of the cathelicidin LL-37 is modulated by short chain fatty acids in colonocytes: relevance of signalling pathways
-
Schauber J., et al. Expression of the cathelicidin LL-37 is modulated by short chain fatty acids in colonocytes: relevance of signalling pathways. Gut 2003, 52:735-741.
-
(2003)
Gut
, vol.52
, pp. 735-741
-
-
Schauber, J.1
-
86
-
-
78751653584
-
Reduction of disulphide bonds unmasks potent antimicrobial activity of human beta-defensin 1
-
Schroeder B.O., et al. Reduction of disulphide bonds unmasks potent antimicrobial activity of human beta-defensin 1. Nature 2011, 469:419-423.
-
(2011)
Nature
, vol.469
, pp. 419-423
-
-
Schroeder, B.O.1
-
87
-
-
75749133608
-
Bacterial flagellin stimulates Toll-like receptor 5-dependent defense against vancomycin-resistant Enterococcus infection
-
Kinnebrew M.A., et al. Bacterial flagellin stimulates Toll-like receptor 5-dependent defense against vancomycin-resistant Enterococcus infection. J. Infect. Dis. 2010, 201:534-543.
-
(2010)
J. Infect. Dis.
, vol.201
, pp. 534-543
-
-
Kinnebrew, M.A.1
-
88
-
-
74049122536
-
Enteric defensins are essential regulators of intestinal microbial ecology
-
Salzman N.H., et al. Enteric defensins are essential regulators of intestinal microbial ecology. Nat. Immunol. 2010, 11:76-83.
-
(2010)
Nat. Immunol.
, vol.11
, pp. 76-83
-
-
Salzman, N.H.1
-
89
-
-
44149126798
-
Secreted enteric antimicrobial activity localises to the mucus surface layer
-
Meyer-Hoffert U., et al. Secreted enteric antimicrobial activity localises to the mucus surface layer. Gut 2008, 57:764-771.
-
(2008)
Gut
, vol.57
, pp. 764-771
-
-
Meyer-Hoffert, U.1
-
90
-
-
84907551722
-
Lineage selection and plasticity in the intestinal crypt
-
Philpott A., Winton D.J. Lineage selection and plasticity in the intestinal crypt. Curr. Opin. Cell Biol. 2014, 31C:39-45.
-
(2014)
Curr. Opin. Cell Biol.
, vol.31 C
, pp. 39-45
-
-
Philpott, A.1
Winton, D.J.2
-
91
-
-
37149022209
-
Review article: the role of butyrate on colonic function
-
Hamer H.M., et al. Review article: the role of butyrate on colonic function. Aliment. Pharmacol. Ther. 2008, 27:104-119.
-
(2008)
Aliment. Pharmacol. Ther.
, vol.27
, pp. 104-119
-
-
Hamer, H.M.1
-
92
-
-
70350666634
-
Regulation of inflammatory responses by gut microbiota and chemoattractant receptor GPR43
-
Maslowski K.M., et al. Regulation of inflammatory responses by gut microbiota and chemoattractant receptor GPR43. Nature 2009, 461:1282-1286.
-
(2009)
Nature
, vol.461
, pp. 1282-1286
-
-
Maslowski, K.M.1
-
93
-
-
84881068658
-
The microbial metabolites, short-chain fatty acids, regulate colonic Treg cell homeostasis
-
Smith P.M., et al. The microbial metabolites, short-chain fatty acids, regulate colonic Treg cell homeostasis. Science 2013, 341:569-573.
-
(2013)
Science
, vol.341
, pp. 569-573
-
-
Smith, P.M.1
-
94
-
-
84864541097
-
G protein-coupled receptors for energy metabolites as new therapeutic targets
-
Blad C.C., et al. G protein-coupled receptors for energy metabolites as new therapeutic targets. Nat. Rev. Drug Discov. 2012, 11:603-619.
-
(2012)
Nat. Rev. Drug Discov.
, vol.11
, pp. 603-619
-
-
Blad, C.C.1
-
95
-
-
20744446421
-
Effects of dietary fiber on inflammatory bowel disease
-
Galvez J., et al. Effects of dietary fiber on inflammatory bowel disease. Mol. Nutr. Food Res. 2005, 49:601-608.
-
(2005)
Mol. Nutr. Food Res.
, vol.49
, pp. 601-608
-
-
Galvez, J.1
-
96
-
-
84863472497
-
A crypt-specific core microbiota resides in the mouse colon
-
Pedron T., et al. A crypt-specific core microbiota resides in the mouse colon. mBio 2012, 3:e00116-e212.
-
(2012)
mBio
, vol.3
, pp. e00116-e00212
-
-
Pedron, T.1
-
97
-
-
60649091298
-
Drosophila intestinal response to bacterial infection: activation of host defense and stem cell proliferation
-
Buchon N., et al. Drosophila intestinal response to bacterial infection: activation of host defense and stem cell proliferation. Cell Host Microbe 2009, 5:200-211.
-
(2009)
Cell Host Microbe
, vol.5
, pp. 200-211
-
-
Buchon, N.1
-
98
-
-
84888864785
-
Symbiotic lactobacilli stimulate gut epithelial proliferation via Nox-mediated generation of reactive oxygen species
-
Jones R.M., et al. Symbiotic lactobacilli stimulate gut epithelial proliferation via Nox-mediated generation of reactive oxygen species. EMBO J. 2013, 32:3017-3028.
-
(2013)
EMBO J.
, vol.32
, pp. 3017-3028
-
-
Jones, R.M.1
-
99
-
-
84892714390
-
PGRP-SC2 promotes gut immune homeostasis to limit commensal dysbiosis and extend lifespan
-
Guo L., et al. PGRP-SC2 promotes gut immune homeostasis to limit commensal dysbiosis and extend lifespan. Cell 2014, 156:109-122.
-
(2014)
Cell
, vol.156
, pp. 109-122
-
-
Guo, L.1
-
100
-
-
33745746660
-
Muc2-deficient mice spontaneously develop colitis, indicating that MUC2 is critical for colonic protection
-
Van der Sluis M., et al. Muc2-deficient mice spontaneously develop colitis, indicating that MUC2 is critical for colonic protection. Gastroenterology 2006, 131:117-129.
-
(2006)
Gastroenterology
, vol.131
, pp. 117-129
-
-
Van der Sluis, M.1
-
101
-
-
0030119726
-
Histochemical, lectin-histochemical and morphometrical characteristics of intestinal goblet cells of germfree and conventional mice
-
Kandori H., et al. Histochemical, lectin-histochemical and morphometrical characteristics of intestinal goblet cells of germfree and conventional mice. Exp. Anim. 1996, 45:155-160.
-
(1996)
Exp. Anim.
, vol.45
, pp. 155-160
-
-
Kandori, H.1
-
102
-
-
0027031556
-
Changes in colonic mucins of germfree rats in response to the introduction of a "normal" rat microbial flora. Rat colonic mucin
-
Enss M.L., et al. Changes in colonic mucins of germfree rats in response to the introduction of a "normal" rat microbial flora. Rat colonic mucin. J. Exp. Anim. Sci. 1992, 35:110-119.
-
(1992)
J. Exp. Anim. Sci.
, vol.35
, pp. 110-119
-
-
Enss, M.L.1
-
103
-
-
84884127512
-
Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences
-
Langille M.G., et al. Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences. Nat. Biotechnol. 2013, 31:814-821.
-
(2013)
Nat. Biotechnol.
, vol.31
, pp. 814-821
-
-
Langille, M.G.1
-
104
-
-
84883110880
-
Richness of human gut microbiome correlates with metabolic markers
-
Le Chatelier E., et al. Richness of human gut microbiome correlates with metabolic markers. Nature 2013, 500:541-546.
-
(2013)
Nature
, vol.500
, pp. 541-546
-
-
Le Chatelier, E.1
-
105
-
-
77950251400
-
A human gut microbial gene catalogue established by metagenomic sequencing
-
Qin J., et al. A human gut microbial gene catalogue established by metagenomic sequencing. Nature 2010, 464:59-65.
-
(2010)
Nature
, vol.464
, pp. 59-65
-
-
Qin, J.1
-
106
-
-
35548974423
-
Identification of stem cells in small intestine and colon by marker gene Lgr5
-
Barker N., et al. Identification of stem cells in small intestine and colon by marker gene Lgr5. Nature 2007, 449:1003-1007.
-
(2007)
Nature
, vol.449
, pp. 1003-1007
-
-
Barker, N.1
-
107
-
-
84867198093
-
Wnt5a potentiates TGF-beta signaling to promote colonic crypt regeneration after tissue injury
-
Miyoshi H., et al. Wnt5a potentiates TGF-beta signaling to promote colonic crypt regeneration after tissue injury. Science 2012, 338:108-113.
-
(2012)
Science
, vol.338
, pp. 108-113
-
-
Miyoshi, H.1
-
108
-
-
84905968786
-
Fecal microbiota transplantation for the treatment of Clostridium difficile infection: a systematic review
-
Cammarota G., et al. Fecal microbiota transplantation for the treatment of Clostridium difficile infection: a systematic review. J. Clin. Gastroenterol. 2014, 48:693-702.
-
(2014)
J. Clin. Gastroenterol.
, vol.48
, pp. 693-702
-
-
Cammarota, G.1
|