-
1
-
-
84863001577
-
Prime, repair, restore: the active role of chromatin in the DNA damage response
-
Soria G., Polo S.E., Almouzni G. Prime, repair, restore: the active role of chromatin in the DNA damage response. Mol. Cell. 2012, 46:722-734.
-
(2012)
Mol. Cell.
, vol.46
, pp. 722-734
-
-
Soria, G.1
Polo, S.E.2
Almouzni, G.3
-
2
-
-
77954759085
-
The interface between transcription and mechanisms maintaining genome integrity
-
Svejstrup J.Q. The interface between transcription and mechanisms maintaining genome integrity. Trends Biochem. Sci. 2010, 35:333-338.
-
(2010)
Trends Biochem. Sci.
, vol.35
, pp. 333-338
-
-
Svejstrup, J.Q.1
-
3
-
-
84887151305
-
The intertwined roles of transcription and repair proteins
-
Fong Y.W., Cattoglio C., Tjian R. The intertwined roles of transcription and repair proteins. Mol. Cell. 2013, 52:291-302.
-
(2013)
Mol. Cell.
, vol.52
, pp. 291-302
-
-
Fong, Y.W.1
Cattoglio, C.2
Tjian, R.3
-
4
-
-
0020066520
-
Failure of RNA synthesis to recover after UV irradiation: an early defect in cells from individuals with Cockayne's syndrome and xeroderma pigmentosum
-
Mayne L.V., Lehmann A.R. Failure of RNA synthesis to recover after UV irradiation: an early defect in cells from individuals with Cockayne's syndrome and xeroderma pigmentosum. Cancer Res. 1982, 42:1473-1478.
-
(1982)
Cancer Res.
, vol.42
, pp. 1473-1478
-
-
Mayne, L.V.1
Lehmann, A.R.2
-
5
-
-
0035204187
-
Local UV-induced DNA damage in cell nuclei results in local transcription inhibition
-
Moné M.J., Volker M., Nikaido O., Mullenders L.H., van Zeeland A.A., Verschure P.J., et al. Local UV-induced DNA damage in cell nuclei results in local transcription inhibition. EMBO Rep. 2001, 2:1013-1017.
-
(2001)
EMBO Rep.
, vol.2
, pp. 1013-1017
-
-
Moné, M.J.1
Volker, M.2
Nikaido, O.3
Mullenders, L.H.4
van Zeeland, A.A.5
Verschure, P.J.6
-
6
-
-
34548692558
-
Inhibition of transcription at radiation-induced nuclear foci of phosphorylated histone H2AX in mammalian cells
-
Solovjeva L.V., Svetlova M.P., Chagin V.O., Tomilin N.V. Inhibition of transcription at radiation-induced nuclear foci of phosphorylated histone H2AX in mammalian cells. Chromosome Res. 2007, 15:787-797.
-
(2007)
Chromosome Res.
, vol.15
, pp. 787-797
-
-
Solovjeva, L.V.1
Svetlova, M.P.2
Chagin, V.O.3
Tomilin, N.V.4
-
7
-
-
77951498531
-
High-resolution profiling of gammaH2AX around DNA double strand breaks in the mammalian genome
-
Iacovoni J.S., Caron P., Lassadi I., Nicolas E., Massip L., Trouche D., et al. High-resolution profiling of gammaH2AX around DNA double strand breaks in the mammalian genome. Embo J. 2010, 29:1446-1457.
-
(2010)
Embo J.
, vol.29
, pp. 1446-1457
-
-
Iacovoni, J.S.1
Caron, P.2
Lassadi, I.3
Nicolas, E.4
Massip, L.5
Trouche, D.6
-
8
-
-
77953720192
-
ATM-dependent chromatin changes silence transcription in cis to DNA double-strand breaks
-
Shanbhag N.M., Rafalska-Metcalf I.U., Balane-Bolivar C., Janicki S.M., Greenberg R.A. ATM-dependent chromatin changes silence transcription in cis to DNA double-strand breaks. Cell 2010, 141:970-981.
-
(2010)
Cell
, vol.141
, pp. 970-981
-
-
Shanbhag, N.M.1
Rafalska-Metcalf, I.U.2
Balane-Bolivar, C.3
Janicki, S.M.4
Greenberg, R.A.5
-
9
-
-
84862829622
-
DNAPKcs-dependent arrest of RNA polymerase II transcription in the presence of DNA breaks
-
Pankotai T., Bonhomme C., Chen D., Soutoglou E. DNAPKcs-dependent arrest of RNA polymerase II transcription in the presence of DNA breaks. Nat. Struct. Mol. Biol. 2012, 19:276-282.
-
(2012)
Nat. Struct. Mol. Biol.
, vol.19
, pp. 276-282
-
-
Pankotai, T.1
Bonhomme, C.2
Chen, D.3
Soutoglou, E.4
-
10
-
-
34250022502
-
The ATM repair pathway inhibits RNA polymerase I transcription in response to chromosome breaks
-
Kruhlak M., Crouch E.E., Orlov M., Montaño C., Gorski S.A., Nussenzweig A., et al. The ATM repair pathway inhibits RNA polymerase I transcription in response to chromosome breaks. Nature 2007, 447:730-734.
-
(2007)
Nature
, vol.447
, pp. 730-734
-
-
Kruhlak, M.1
Crouch, E.E.2
Orlov, M.3
Montaño, C.4
Gorski, S.A.5
Nussenzweig, A.6
-
11
-
-
84883480059
-
DNA damage-induced inhibition of rRNA synthesis by DNA-PK and PARP-1
-
Calkins A.S., Iglehart J.D., Lazaro J.-B. DNA damage-induced inhibition of rRNA synthesis by DNA-PK and PARP-1. Nucleic Acids Res. 2013, 41:7378-7386.
-
(2013)
Nucleic Acids Res.
, vol.41
, pp. 7378-7386
-
-
Calkins, A.S.1
Iglehart, J.D.2
Lazaro, J.-B.3
-
12
-
-
56749157389
-
Transcription-coupled DNA repair: two decades of progress and surprises
-
Hanawalt P.C., Spivak G. Transcription-coupled DNA repair: two decades of progress and surprises. Nat. Rev. Mol. Cell Biol. 2008, 9:958-970.
-
(2008)
Nat. Rev. Mol. Cell Biol.
, vol.9
, pp. 958-970
-
-
Hanawalt, P.C.1
Spivak, G.2
-
14
-
-
84867794037
-
Preferential repair of DNA double-strand break at the active gene in vivo
-
Chaurasia P., Sen R., Pandita T.K., Bhaumik S.R. Preferential repair of DNA double-strand break at the active gene in vivo. J. Biol. Chem. 2012, 287:36414-36422.
-
(2012)
J. Biol. Chem.
, vol.287
, pp. 36414-36422
-
-
Chaurasia, P.1
Sen, R.2
Pandita, T.K.3
Bhaumik, S.R.4
-
15
-
-
84887117259
-
ELL, a novel TFIIH partner, is involved in transcription restart after DNA repair
-
Mourgues S., Gautier V., Lagarou A., Bordier C., Mourcet A., Slingerland J., et al. ELL, a novel TFIIH partner, is involved in transcription restart after DNA repair. Proc. Natl. Acad. Sci. U. S. A. 2013, 110:17927-17932.
-
(2013)
Proc. Natl. Acad. Sci. U. S. A.
, vol.110
, pp. 17927-17932
-
-
Mourgues, S.1
Gautier, V.2
Lagarou, A.3
Bordier, C.4
Mourcet, A.5
Slingerland, J.6
-
16
-
-
78049414233
-
Transcription factor IIS impacts UV-inhibited transcription
-
Jensen A., Mullenders L.H.F. Transcription factor IIS impacts UV-inhibited transcription. DNA Repair 2010, 9:1142-1150.
-
(2010)
DNA Repair
, vol.9
, pp. 1142-1150
-
-
Jensen, A.1
Mullenders, L.H.F.2
-
17
-
-
78649349810
-
A chromatin localization screen reveals poly (ADP ribose)-regulated recruitment of the repressive polycomb and NuRD complexes to sites of DNA damage
-
Chou D.M., Adamson B., Dephoure N.E., Tan X., Nottke A.C., Hurov K.E., et al. A chromatin localization screen reveals poly (ADP ribose)-regulated recruitment of the repressive polycomb and NuRD complexes to sites of DNA damage. Proc. Natl. Acad. Sci. U. S. A. 2010, 107:18475-18480.
-
(2010)
Proc. Natl. Acad. Sci. U. S. A.
, vol.107
, pp. 18475-18480
-
-
Chou, D.M.1
Adamson, B.2
Dephoure, N.E.3
Tan, X.4
Nottke, A.C.5
Hurov, K.E.6
-
18
-
-
50849104569
-
Double strand breaks can initiate gene silencing and SIRT1-dependent onset of DNA methylation in an exogenous promoter CpG island
-
O'hagan H.M., Mohammad H.P., Baylin S.B. Double strand breaks can initiate gene silencing and SIRT1-dependent onset of DNA methylation in an exogenous promoter CpG island. PLoS Genet. 2008, 4:e1000155.
-
(2008)
PLoS Genet.
, vol.4
, pp. e1000155
-
-
O'hagan, H.M.1
Mohammad, H.P.2
Baylin, S.B.3
-
19
-
-
81255162523
-
Oxidative damage targets complexes containing DNA methyltransferases, SIRT1, and polycomb members to promoter CpG Islands
-
O'hagan H.M., Wang W., Sen S., Destefano Shields C., Lee S.S., Zhang Y.W., et al. Oxidative damage targets complexes containing DNA methyltransferases, SIRT1, and polycomb members to promoter CpG Islands. Cancer Cell 2011, 20:606-619.
-
(2011)
Cancer Cell
, vol.20
, pp. 606-619
-
-
O'hagan, H.M.1
Wang, W.2
Sen, S.3
Destefano Shields, C.4
Lee, S.S.5
Zhang, Y.W.6
-
20
-
-
82955249089
-
Double-strand break-induced transcriptional silencing is associated with loss of tri-methylation at H3K4
-
Seiler D.M., Rouquette J., Schmid V.J., Strickfaden H., Ottmann C., Drexler G.A., et al. Double-strand break-induced transcriptional silencing is associated with loss of tri-methylation at H3K4. Chromosome Res. 2011, 19:883-899.
-
(2011)
Chromosome Res.
, vol.19
, pp. 883-899
-
-
Seiler, D.M.1
Rouquette, J.2
Schmid, V.J.3
Strickfaden, H.4
Ottmann, C.5
Drexler, G.A.6
-
21
-
-
84872542755
-
Sirt1 suppresses RNA synthesis after UV irradiation in combined xeroderma pigmentosum group D/Cockayne syndrome (XP-D/CS) cells
-
E212-20
-
Vélez-Cruz R., Zadorin A.S., Coin F., Egly J.-M. Sirt1 suppresses RNA synthesis after UV irradiation in combined xeroderma pigmentosum group D/Cockayne syndrome (XP-D/CS) cells. Proc. Natl. Acad. Sci. U. S. A. 2013, 110:E212-20.
-
(2013)
Proc. Natl. Acad. Sci. U. S. A.
, vol.110
-
-
Vélez-Cruz, R.1
Zadorin, A.S.2
Coin, F.3
Egly, J.-M.4
-
22
-
-
84869102655
-
The emerging role of polycomb repressors in the response to DNA damage
-
Vissers J.H.A., van Lohuizen M., Citterio E. The emerging role of polycomb repressors in the response to DNA damage. J. Cell Sci. 2012, 125:3939-3948.
-
(2012)
J. Cell Sci.
, vol.125
, pp. 3939-3948
-
-
Vissers, J.H.A.1
van Lohuizen, M.2
Citterio, E.3
-
23
-
-
84903446359
-
DNA double-strand breaks promote methylation of histone H3 on lysine 9 and transient formation of repressive chromatin
-
Ayrapetov M.K., Gursoy-Yuzugullu O., Xu C., Xu Y., Price B.D. DNA double-strand breaks promote methylation of histone H3 on lysine 9 and transient formation of repressive chromatin. Proc. Natl. Acad. Sci. U. S. A. 2014, 111:9169-9174.
-
(2014)
Proc. Natl. Acad. Sci. U. S. A.
, vol.111
, pp. 9169-9174
-
-
Ayrapetov, M.K.1
Gursoy-Yuzugullu, O.2
Xu, C.3
Xu, Y.4
Price, B.D.5
-
24
-
-
84880790091
-
Histone methyltransferase DOT1L drives recovery of gene expression after a genotoxic attack
-
Oksenych V., Zhovmer A., Ziani S., Mari P.-O., Eberova J., Nardo T., et al. Histone methyltransferase DOT1L drives recovery of gene expression after a genotoxic attack. PLoS Genet. 2013, 9:e1003611.
-
(2013)
PLoS Genet.
, vol.9
, pp. e1003611
-
-
Oksenych, V.1
Zhovmer, A.2
Ziani, S.3
Mari, P.-O.4
Eberova, J.5
Nardo, T.6
-
25
-
-
84925659063
-
Reshaping chromatin after DNA damage: the choreography of histone proteins
-
(Epub ahead of print)
-
Polo S.E. Reshaping chromatin after DNA damage: the choreography of histone proteins. J. Mol. Biol. 2014, 10.1016/j.jmb.2014.05.025 (Epub ahead of print).
-
(2014)
J. Mol. Biol.
-
-
Polo, S.E.1
-
27
-
-
84876875641
-
ATP-dependent chromatin remodeling by cockayne syndrome protein B and NAP1-like histone chaperones is required for efficient transcription-coupled DNA repair
-
Cho I., Tsai P.-F., Lake R.J., Basheer A., Fan H.-Y. ATP-dependent chromatin remodeling by cockayne syndrome protein B and NAP1-like histone chaperones is required for efficient transcription-coupled DNA repair. PLoS Genet. 2013, 9:e1003407.
-
(2013)
PLoS Genet.
, vol.9
, pp. e1003407
-
-
Cho, I.1
Tsai, P.-F.2
Lake, R.J.3
Basheer, A.4
Fan, H.-Y.5
-
28
-
-
84901491342
-
Role of chromatin remodeling during the transcriptional restart upon DNA damage
-
(Epub ahead of print)
-
Mandemaker I., Vermeulen W., Marteijn J. Role of chromatin remodeling during the transcriptional restart upon DNA damage. Nucleus 2014, 5. (Epub ahead of print).
-
(2014)
Nucleus
, vol.5
-
-
Mandemaker, I.1
Vermeulen, W.2
Marteijn, J.3
-
29
-
-
84884889017
-
Transcription recovery after DNA damage requires chromatin priming by the H3.3 histone chaperone HIRA
-
Adam S., Polo S.E., Almouzni G. Transcription recovery after DNA damage requires chromatin priming by the H3.3 histone chaperone HIRA. Cell 2013, 155:94-106.
-
(2013)
Cell
, vol.155
, pp. 94-106
-
-
Adam, S.1
Polo, S.E.2
Almouzni, G.3
-
30
-
-
79952536146
-
The double face of the histone variant H3.3
-
Szenker E., Ray-Gallet D., Almouzni G. The double face of the histone variant H3.3. Cell Res. 2011, 21:421-434.
-
(2011)
Cell Res.
, vol.21
, pp. 421-434
-
-
Szenker, E.1
Ray-Gallet, D.2
Almouzni, G.3
-
31
-
-
84885353806
-
H3.3 actively marks enhancers and primes gene transcription via opening higher-ordered chromatin
-
Chen P., Zhao J., Wang Y., Wang M., Long H., Liang D., et al. H3.3 actively marks enhancers and primes gene transcription via opening higher-ordered chromatin. Genes Dev. 2013, 27:2109-2124.
-
(2013)
Genes Dev.
, vol.27
, pp. 2109-2124
-
-
Chen, P.1
Zhao, J.2
Wang, Y.3
Wang, M.4
Long, H.5
Liang, D.6
-
32
-
-
84880048047
-
Histone acetyltransferase 1 promotes homologous recombination in DNA repair by facilitating histone turnover
-
Yang X., Li L., Liang J., Shi L., Yang J., Yi X., et al. Histone acetyltransferase 1 promotes homologous recombination in DNA repair by facilitating histone turnover. J. Biol. Chem. 2013, 288:18271-18282.
-
(2013)
J. Biol. Chem.
, vol.288
, pp. 18271-18282
-
-
Yang, X.1
Li, L.2
Liang, J.3
Shi, L.4
Yang, J.5
Yi, X.6
-
33
-
-
84863622647
-
HIRA, a conserved histone chaperone plays an essential role in low-dose stress response via transcriptional stimulation in fission yeast
-
Chujo M., Tarumoto Y., Miyatake K., Nishida E., Ishikawa F. HIRA, a conserved histone chaperone plays an essential role in low-dose stress response via transcriptional stimulation in fission yeast. J. Biol. Chem. 2012, 287:23440-23450.
-
(2012)
J. Biol. Chem.
, vol.287
, pp. 23440-23450
-
-
Chujo, M.1
Tarumoto, Y.2
Miyatake, K.3
Nishida, E.4
Ishikawa, F.5
-
34
-
-
84887512911
-
Histone H3.3 mutations: a variant path to cancer
-
Yuen B.T.K., Knoepfler P.S. Histone H3.3 mutations: a variant path to cancer. Cancer Cell. 2013, 24:567-574.
-
(2013)
Cancer Cell.
, vol.24
, pp. 567-574
-
-
Yuen, B.T.K.1
Knoepfler, P.S.2
-
35
-
-
84888353557
-
Distinct H3F3A and H3F3B driver mutations define chondroblastoma and giant cell tumor of bone
-
Behjati S., Tarpey P.S., Presneau N., Scheipl S., Pillay N., Van Loo P., et al. Distinct H3F3A and H3F3B driver mutations define chondroblastoma and giant cell tumor of bone. Nat. Genet. 2013, 45:1479-1482.
-
(2013)
Nat. Genet.
, vol.45
, pp. 1479-1482
-
-
Behjati, S.1
Tarpey, P.S.2
Presneau, N.3
Scheipl, S.4
Pillay, N.5
Van Loo, P.6
-
36
-
-
84882585259
-
Enhanced chromatin dynamics by FACT promotes transcriptional restart after UV-induced DNA damage
-
Dinant C., Ampatziadis-Michailidis G., Lans H., Tresini M., Lagarou A., Grosbart M., et al. Enhanced chromatin dynamics by FACT promotes transcriptional restart after UV-induced DNA damage. Mol. Cell. 2013, 51:469-479.
-
(2013)
Mol. Cell.
, vol.51
, pp. 469-479
-
-
Dinant, C.1
Ampatziadis-Michailidis, G.2
Lans, H.3
Tresini, M.4
Lagarou, A.5
Grosbart, M.6
-
37
-
-
84894048601
-
Histone chaperone FACT regulates homologous recombination by chromatin remodeling through interaction with RNF20
-
Oliveira D.V., Kato A., Nakamura K., Ikura T., Okada M., Kobayashi J., et al. Histone chaperone FACT regulates homologous recombination by chromatin remodeling through interaction with RNF20. J. Cell Sci. 2014, 127:763-772.
-
(2014)
J. Cell Sci.
, vol.127
, pp. 763-772
-
-
Oliveira, D.V.1
Kato, A.2
Nakamura, K.3
Ikura, T.4
Okada, M.5
Kobayashi, J.6
-
38
-
-
84898841862
-
The yeast and human FACT chromatin-reorganizing complexes solve R-loop-mediated transcription-replication conflicts
-
Herrera-Moyano E., Mergui X., García-Rubio M.L., Barroso S., Aguilera A. The yeast and human FACT chromatin-reorganizing complexes solve R-loop-mediated transcription-replication conflicts. Genes Dev. 2014, 28:735-748.
-
(2014)
Genes Dev.
, vol.28
, pp. 735-748
-
-
Herrera-Moyano, E.1
Mergui, X.2
García-Rubio, M.L.3
Barroso, S.4
Aguilera, A.5
-
39
-
-
82755183606
-
Correct end use during end joining of multiple chromosomal double strand breaks is influenced by repair protein RAD50, DNA-dependent protein kinase DNA-PKcs, and transcription context
-
Gunn A., Bennardo N., Cheng A., Stark J.M. Correct end use during end joining of multiple chromosomal double strand breaks is influenced by repair protein RAD50, DNA-dependent protein kinase DNA-PKcs, and transcription context. J. Biol. Chem. 2011, 286:42470-42482.
-
(2011)
J. Biol. Chem.
, vol.286
, pp. 42470-42482
-
-
Gunn, A.1
Bennardo, N.2
Cheng, A.3
Stark, J.M.4
-
40
-
-
84897990643
-
Transcriptionally active chromatin recruits homologous recombination at DNA double-strand breaks
-
Aymard F., Bugler B., Schmidt C.K., Guillou E., Caron P., Briois S., et al. Transcriptionally active chromatin recruits homologous recombination at DNA double-strand breaks. Nat. Struct. Mol. Biol. 2014, 21:366-374.
-
(2014)
Nat. Struct. Mol. Biol.
, vol.21
, pp. 366-374
-
-
Aymard, F.1
Bugler, B.2
Schmidt, C.K.3
Guillou, E.4
Caron, P.5
Briois, S.6
-
41
-
-
84903451450
-
SETD2-dependent histone H3K36 trimethylation is required for homologous recombination repair and genome stability
-
Pfister S.X., Ahrabi S., Zalmas L.-P., Sarkar S., Aymard F., Bachrati C.Z., Helleday T., Legube G., La Thangue N.B., Porter A.C.G., et al. SETD2-dependent histone H3K36 trimethylation is required for homologous recombination repair and genome stability. Cell Rep. 2014, 7(2014):2006-2018.
-
(2014)
Cell Rep.
, vol.7
, Issue.2014
, pp. 2006-2018
-
-
Pfister, S.X.1
Ahrabi, S.2
Zalmas, L.-P.3
Sarkar, S.4
Aymard, F.5
Bachrati, C.Z.6
Helleday, T.7
Legube, G.8
La Thangue, N.B.9
Porter, A.C.G.10
-
42
-
-
84902251340
-
A histone H3K36 chromatin switch coordinates DNA double-strand break repair pathway choice
-
Pai C.-C., Deegan R.S., Subramanian L., Gal C., Sarkar S., Blaikley E.J., et al. A histone H3K36 chromatin switch coordinates DNA double-strand break repair pathway choice. Nat. Commun. 2014, 5:4091.
-
(2014)
Nat. Commun.
, vol.5
, pp. 4091
-
-
Pai, C.-C.1
Deegan, R.S.2
Subramanian, L.3
Gal, C.4
Sarkar, S.5
Blaikley, E.J.6
-
43
-
-
84902253278
-
An RNA polymerase II-coupled function for histone H3K36 methylation in checkpoint activation and DSB repair
-
Jha D.K., Strahl B.D. An RNA polymerase II-coupled function for histone H3K36 methylation in checkpoint activation and DSB repair. Nat. Commun. 2014, 5:3965.
-
(2014)
Nat. Commun.
, vol.5
, pp. 3965
-
-
Jha, D.K.1
Strahl, B.D.2
-
44
-
-
84864647205
-
Site-specific DICER and DROSHA RNA products control the DNA-damage response
-
Francia S., Michelini F., Saxena A., Tang D., de Hoon M., Anelli V., et al. Site-specific DICER and DROSHA RNA products control the DNA-damage response. Nature 2012, 488:231-235.
-
(2012)
Nature
, vol.488
, pp. 231-235
-
-
Francia, S.1
Michelini, F.2
Saxena, A.3
Tang, D.4
de Hoon, M.5
Anelli, V.6
-
45
-
-
84862777814
-
A role for small RNAs in DNA double-strand break repair
-
Wei W., Ba Z., Gao M., Wu Y., Ma Y., Amiard S., et al. A role for small RNAs in DNA double-strand break repair. Cell 2012, 149:101-112.
-
(2012)
Cell
, vol.149
, pp. 101-112
-
-
Wei, W.1
Ba, Z.2
Gao, M.3
Wu, Y.4
Ma, Y.5
Amiard, S.6
|