-
1
-
-
80054056017
-
Malaria vaccines and the new malaria agenda
-
Greenwood BM, Targett GA (2011) Malaria vaccines and the new malaria agenda. Clin Microbiol Infect 17: 1600-1607.
-
(2011)
Clin Microbiol Infect
, vol.17
, pp. 1600-1607
-
-
Greenwood, B.M.1
Targett, G.A.2
-
2
-
-
81455154875
-
First results of phase 3 trial of RTS,S/AS01 malaria vaccine in African children
-
Agnandji ST, Lell B, Soulanoudjingar SS, Fernandes JF, Abossolo BP, et al. (2011) First results of phase 3 trial of RTS,S/AS01 malaria vaccine in African children. N Engl J Med 365: 1863-1875.
-
(2011)
N Engl J Med
, vol.365
, pp. 1863-1875
-
-
Agnandji, S.T.1
Lell, B.2
Soulanoudjingar, S.S.3
Fernandes, J.F.4
Abossolo, B.P.5
-
3
-
-
68049146050
-
Artemisinin-resistant malaria in asia
-
Noedl H, Socheat D, Satimai W (2009) Artemisinin-resistant malaria in Asia. N Engl J Med 361: 540-541.
-
(2009)
N Engl J Med
, vol.361
, pp. 540-541
-
-
Noedl, H.1
Socheat, D.2
Satimai, W.3
-
4
-
-
79951601844
-
A research agenda to underpin malaria eradication
-
Alonso PL, Brown G, Arevalo-Herrera M, Binka F, Chitnis C, et al. (2011) A research agenda to underpin malaria eradication. PLoS Med 8: e1000406.
-
(2011)
PLoS Med
, vol.8
, pp. e1000406
-
-
Alonso, P.L.1
Brown, G.2
Arevalo-Herrera, M.3
Binka, F.4
Chitnis, C.5
-
5
-
-
67649161040
-
Diagnosis and management of the neurological complications of falciparum malaria
-
Mishra SK, Newton CR (2009) Diagnosis and management of the neurological complications of falciparum malaria. Nat Rev Neurol 5: 189-198.
-
(2009)
Nat Rev Neurol
, vol.5
, pp. 189-198
-
-
Mishra, S.K.1
Newton, C.R.2
-
6
-
-
36849090615
-
Subcellular discharge of a serine protease mediates release of invasive malaria parasites from host erythrocytes
-
Yeoh S, O'Donnell RA, Koussis K, Dluzewski AR, Ansell KH, et al. (2007) Subcellular discharge of a serine protease mediates release of invasive malaria parasites from host erythrocytes. Cell 131: 1072-1083.
-
(2007)
Cell
, vol.131
, pp. 1072-1083
-
-
Yeoh, S.1
O'Donnell, R.A.2
Koussis, K.3
Dluzewski, A.R.4
Ansell, K.H.5
-
7
-
-
84887836603
-
A key role for plasmodium subtilisin-like SUB1 protease in egress of malaria parasites from host hepatocytes
-
Tawk L, Lacroix C, Gueirard P, Kent R, Gorgette O, et al. (2013) A Key Role for Plasmodium Subtilisin-like SUB1 Protease in Egress of Malaria Parasites from Host Hepatocytes. J Biol Chem 288: 33336-33346.
-
(2013)
J Biol Chem
, vol.288
, pp. 33336-33346
-
-
Tawk, L.1
Lacroix, C.2
Gueirard, P.3
Kent, R.4
Gorgette, O.5
-
8
-
-
0042473228
-
Structures of phage-display peptides that bind to the malarial surface protein, apical membrane antigen 1, and block erythrocyte invasion
-
Keizer DW, Miles LA, Li F, Nair M, Anders RF, et al. (2003) Structures of phage-display peptides that bind to the malarial surface protein, apical membrane antigen 1, and block erythrocyte invasion. Biochemistry 42: 9915-9923.
-
(2003)
Biochemistry
, vol.42
, pp. 9915-9923
-
-
Keizer, D.W.1
Miles, L.A.2
Li, F.3
Nair, M.4
Anders, R.F.5
-
9
-
-
0036682237
-
Synthesis and in vitro studies of novel pyrimidinyl peptidomimetics as potential antimalarial therapeutic agents
-
Zhu S, Hudson TH, Kyle DE, Lin AJ (2002) Synthesis and in vitro studies of novel pyrimidinyl peptidomimetics as potential antimalarial therapeutic agents. J Med Chem 45: 3491-3496.
-
(2002)
J Med Chem
, vol.45
, pp. 3491-3496
-
-
Zhu, S.1
Hudson, T.H.2
Kyle, D.E.3
Lin, A.J.4
-
10
-
-
0036207480
-
In vitro antiplasmodium effects of dermaseptin S4 derivatives
-
Dagan A, Efron L, Gaidukov L, Mor A, Ginsburg H (2002) In vitro antiplasmodium effects of dermaseptin S4 derivatives. Antimicrob Agents Chemother 46: 1059-1066.
-
(2002)
Antimicrob Agents Chemother
, vol.46
, pp. 1059-1066
-
-
Dagan, A.1
Efron, L.2
Gaidukov, L.3
Mor, A.4
Ginsburg, H.5
-
12
-
-
3242886171
-
Ribosome display: Cell-free protein display technology
-
He M, Taussig MJ (2002) Ribosome display: cell-free protein display technology. Brief Funct Genomic Proteomic 1: 204-212.
-
(2002)
Brief Funct Genomic Proteomic
, vol.1
, pp. 204-212
-
-
He, M.1
Taussig, M.J.2
-
13
-
-
0030817279
-
Rna-peptide fusions for the in vitro selection of peptides and proteins
-
Roberts RW, Szostak JW (1997) RNA-peptide fusions for the in vitro selection of peptides and proteins. Proc Natl Acad Sci U S A 94: 12297-12302.
-
(1997)
Proc Natl Acad Sci U S A
, vol.94
, pp. 12297-12302
-
-
Roberts, R.W.1
Szostak, J.W.2
-
14
-
-
79960820617
-
Computational reverse-engineering of a spider-venom derived peptide active against plasmodium falciparum sub1
-
Bastianelli G, Bouillon A, Nguyen C, Crublet E, Petres S, et al. (2011) Computational reverse-engineering of a spider-venom derived peptide active against Plasmodium falciparum SUB1. PLoS One 6: e21812.
-
(2011)
PLoS One
, vol.6
, pp. e21812
-
-
Bastianelli, G.1
Bouillon, A.2
Nguyen, C.3
Crublet, E.4
Petres, S.5
-
15
-
-
84880063851
-
In silico screening on the three-dimensional model of the plasmodium vivax sub1 protease leads to the validation of a novel anti-parasite compound
-
Bouillon A, Giganti D, Benedet C, Gorgette O, Petres S, et al. (2013) In Silico Screening on the Three-dimensional Model of the Plasmodium vivax SUB1 Protease Leads to the Validation of a Novel Anti-parasite Compound. J Biol Chem 288: 18561-18573.
-
(2013)
J Biol Chem
, vol.288
, pp. 18561-18573
-
-
Bouillon, A.1
Giganti, D.2
Benedet, C.3
Gorgette, O.4
Petres, S.5
-
16
-
-
0024975550
-
1 H 2D NMR and distance geometry study of the folding of ecballium elaterium trypsin inhibitor, a member of the squash inhibitors family
-
Heitz A, Chiche L, Le-Nguyen D, Castro B (1989) 1 H 2D NMR and distance geometry study of the folding of Ecballium elaterium trypsin inhibitor, a member of the squash inhibitors family. Biochemistry 28: 2392-2398.
-
(1989)
Biochemistry
, vol.28
, pp. 2392-2398
-
-
Heitz, A.1
Chiche, L.2
Le-Nguyen, D.3
Castro, B.4
-
17
-
-
0035239222
-
The cystine knot motif in toxins and implications for drug design
-
Craik DJ, Daly NL, Waine C (2001) The cystine knot motif in toxins and implications for drug design. Toxicon 39: 43-60.
-
(2001)
Toxicon
, vol.39
, pp. 43-60
-
-
Craik, D.J.1
Daly, N.L.2
Waine, C.3
-
18
-
-
34248222232
-
Potential therapeutic applications of the cyclotides and related cystine knot mini-proteins
-
Craik DJ, Clark RJ, Daly NL (2007) Potential therapeutic applications of the cyclotides and related cystine knot mini-proteins. Expert Opin Investig Drugs 16: 595-604.
-
(2007)
Expert Opin Investig Drugs
, vol.16
, pp. 595-604
-
-
Craik, D.J.1
Clark, R.J.2
Daly, N.L.3
-
19
-
-
70349414437
-
Biological diversity and therapeutic potential of natural and engineered cystine knot miniproteins
-
Kolmar H (2009) Biological diversity and therapeutic potential of natural and engineered cystine knot miniproteins. Curr Opin Pharmacol 9: 608-614.
-
(2009)
Curr Opin Pharmacol
, vol.9
, pp. 608-614
-
-
Kolmar, H.1
-
20
-
-
0024317784
-
Design and chemical synthesis of a 32 residues chimeric microprotein inhibiting both trypsin and carboxypeptidase A
-
Le-Nguyen D, Mattras H, Coletti-Previero MA, Castro B (1989) Design and chemical synthesis of a 32 residues chimeric microprotein inhibiting both trypsin and carboxypeptidase A. Biochem Biophys Res Commun 162: 1425-1430.
-
(1989)
Biochem Biophys Res Commun
, vol.162
, pp. 1425-1430
-
-
Le-Nguyen, D.1
Mattras, H.2
Coletti-Previero, M.A.3
Castro, B.4
-
21
-
-
0032824531
-
The cystine knot of a squash-type protease inhibitor as a structural scaffold for escherichia coli cell surface display of conformationally constrained peptides
-
Christmann A, Walter K, Wentzel A, Kratzner R, Kolmar H (1999) The cystine knot of a squash-type protease inhibitor as a structural scaffold for Escherichia coli cell surface display of conformationally constrained peptides. Protein Eng 12: 797-806.
-
(1999)
Protein Eng
, vol.12
, pp. 797-806
-
-
Christmann, A.1
Walter, K.2
Wentzel, A.3
Kratzner, R.4
Kolmar, H.5
-
22
-
-
0043092182
-
Design and characterization of a hybrid miniprotein that specifically inhibits porcine pancreatic elastase
-
Hilpert K, Wessner H, Schneider-Mergener J, Welfle K, Misselwitz R, et al. (2003) Design and characterization of a hybrid miniprotein that specifically inhibits porcine pancreatic elastase. J Biol Chem 278: 24986-24993.
-
(2003)
J Biol Chem
, vol.278
, pp. 24986-24993
-
-
Hilpert, K.1
Wessner, H.2
Schneider-Mergener, J.3
Welfle, K.4
Misselwitz, R.5
-
23
-
-
33646933038
-
Inhibition of platelet aggregation by grafting RGD and KGD sequences on the structural scaffold of small disulfide-rich proteins
-
Reiss S, Sieber M, Oberle V, Wentzel A, Spangenberg P, et al. (2006) Inhibition of platelet aggregation by grafting RGD and KGD sequences on the structural scaffold of small disulfide-rich proteins. Platelets 17: 153-157.
-
(2006)
Platelets
, vol.17
, pp. 153-157
-
-
Reiss, S.1
Sieber, M.2
Oberle, V.3
Wentzel, A.4
Spangenberg, P.5
-
24
-
-
18544368988
-
New binding specificities derived from min-23, a small cystine-stabilized peptidic scaffold
-
Souriau C, Chiche L, Irving R, Hudson P (2005) New binding specificities derived from Min-23, a small cystine-stabilized peptidic scaffold. Biochemistry 44: 7143-7155.
-
(2005)
Biochemistry
, vol.44
, pp. 7143-7155
-
-
Souriau, C.1
Chiche, L.2
Irving, R.3
Hudson, P.4
-
25
-
-
0033597789
-
Sequence requirements of the GPNG beta-turn of the ecballium elaterium trypsin inhibitor II explored by combinatorial library screening
-
Wentzel A, Christmann A, Kratzner R, Kolmar H (1999) Sequence requirements of the GPNG beta-turn of the Ecballium elaterium trypsin inhibitor II explored by combinatorial library screening. J Biol Chem 274: 21037-21043.
-
(1999)
J Biol Chem
, vol.274
, pp. 21037-21043
-
-
Wentzel, A.1
Christmann, A.2
Kratzner, R.3
Kolmar, H.4
-
26
-
-
35148855712
-
Computational design of antibodyaffinity improvement beyond in vivo maturation
-
Lippow SM, Wittrup KD, Tidor B (2007) Computational design of antibodyaffinity improvement beyond in vivo maturation. Nat Biotechnol 25: 1171-1176.
-
(2007)
Nat Biotechnol
, vol.25
, pp. 1171-1176
-
-
Lippow, S.M.1
Wittrup, K.D.2
Tidor, B.3
-
27
-
-
77953808264
-
Computational design of a pak1 binding protein
-
Jha RK, Leaver-Fay A, Yin S, Wu Y, Butterfoss GL, et al. (2010) Computational design of a PAK1 binding protein. J Mol Biol 400: 257-270.
-
(2010)
J Mol Biol
, vol.400
, pp. 257-270
-
-
Jha, R.K.1
Leaver-Fay, A.2
Yin, S.3
Wu, Y.4
Butterfoss, G.L.5
-
28
-
-
0009130599
-
A structural explanation for the twilight zone of protein sequence homology
-
Chung SY, Subbiah S (1996) A structural explanation for the twilight zone of protein sequence homology. Structure 4: 1123-1127.
-
(1996)
Structure
, vol.4
, pp. 1123-1127
-
-
Chung, S.Y.1
Subbiah, S.2
-
29
-
-
17844410707
-
The many faces of proteaseprotein inhibitor interaction
-
Otlewski J, Jelen F, Zakrzewska M, Oleksy A (2005) The many faces of proteaseprotein inhibitor interaction. EMBO J 24: 1303-1310.
-
(2005)
EMBO J
, vol.24
, pp. 1303-1310
-
-
Otlewski, J.1
Jelen, F.2
Zakrzewska, M.3
Oleksy, A.4
-
30
-
-
76249085850
-
How to obtain statistically converged mm/gbsa results
-
Genheden S, Ryde U (2010) How to obtain statistically converged MM/GBSA results. J Comput Chem 31: 837-846.
-
(2010)
J Comput Chem
, vol.31
, pp. 837-846
-
-
Genheden, S.1
Ryde, U.2
-
31
-
-
0037478705
-
Optimization of protease-inhibitor interactions by randomizing adventitious contacts
-
Komiyama T, VanderLugt B, Fugere M, Day R, Kaufman RJ, et al. (2003) Optimization of protease-inhibitor interactions by randomizing adventitious contacts. Proc Natl Acad Sci U S A 100: 8205-8210.
-
(2003)
Proc Natl Acad Sci U S A
, vol.100
, pp. 8205-8210
-
-
Komiyama, T.1
VanderLugt, B.2
Fugere, M.3
Day, R.4
Kaufman, R.J.5
-
32
-
-
62649150175
-
A multifunctional serine protease primes the malaria parasite for red blood cell invasion
-
Koussis K, Withers-Martinez C, Yeoh S, Child M, Hackett F, et al. (2009) A multifunctional serine protease primes the malaria parasite for red blood cell invasion. Embo J 28: 725-735.
-
(2009)
Embo J
, vol.28
, pp. 725-735
-
-
Koussis, K.1
Withers-Martinez, C.2
Yeoh, S.3
Child, M.4
Hackett, F.5
-
33
-
-
79952307062
-
Global identification of multiple substrates for plasmodium falciparum SUB1, an essential malarial processing protease
-
Silmon de Monerri NC, Flynn HR, Campos MG, Hackett F, Koussis K, et al. (2011) Global identification of multiple substrates for Plasmodium falciparum SUB1, an essential malarial processing protease. Infect Immun 79: 1086-1097.
-
(2011)
Infect Immun
, vol.79
, pp. 1086-1097
-
-
Silmon De Monerri, N.C.1
Flynn, H.R.2
Campos, M.G.3
Hackett, F.4
Koussis, K.5
-
35
-
-
0035964342
-
Electrostatics of nanosystems: Application to microtubules and the ribosome
-
Baker NA, Sept D, Joseph S, Holst MJ, McCammon JA (2001) Electrostatics of nanosystems: application to microtubules and the ribosome. Proc Natl Acad Sci U S A 98: 10037-10041.
-
(2001)
Proc Natl Acad Sci U S A
, vol.98
, pp. 10037-10041
-
-
Baker, N.A.1
Sept, D.2
Joseph, S.3
Holst, M.J.4
McCammon, J.A.5
-
36
-
-
0033954256
-
The protein data bank
-
Berman HM, Westbrook J, Feng Z, Gilliland G, Bhat TN, et al. (2000) The Protein Data Bank. Nucleic Acids Res 28: 235-242.
-
(2000)
Nucleic Acids Res
, vol.28
, pp. 235-242
-
-
Berman, H.M.1
Westbrook, J.2
Feng, Z.3
Gilliland, G.4
Bhat, T.N.5
-
37
-
-
1942423619
-
MMTSB tool set: Enhanced sampling and multiscale modeling methods for applications in structural biology
-
rd (2004) MMTSB Tool Set: enhanced sampling and multiscale modeling methods for applications in structural biology. J Mol Graph Model 22: 377-395.
-
(2004)
J Mol Graph Model
, vol.22
, pp. 377-395
-
-
Feig, M.1
Karanicolas, J.2
Brooks, C.L.3
-
38
-
-
34248394606
-
-
University of California, San Francisco
-
Case DA, Darden TA, Cheatham TEI, Simmerling CL, Wang J, et al. (2006) AMBER9. University of California, San Francisco.
-
(2006)
AMBER9
-
-
Case, D.A.1
Darden, T.A.2
Cheatham, T.E.I.3
Simmerling, C.L.4
Wang, J.5
-
39
-
-
33748518255
-
Comparison of multiple amber force fields and development of improved protein backbone parameters
-
Hornak V, Abel R, Okur A, Strockbine B, Roitberg A, et al. (2006) Comparison of multiple Amber force fields and development of improved protein backbone parameters. Proteins 65: 712-725.
-
(2006)
Proteins
, vol.65
, pp. 712-725
-
-
Hornak, V.1
Abel, R.2
Okur, A.3
Strockbine, B.4
Roitberg, A.5
-
40
-
-
0004016501
-
Comparison of simple potential functions for simulating liquid water
-
Jorgensen WL, Chandrasekhar J, Madura JD (1983) Comparison of simple potential functions for simulating liquid water. J Chem Phys 79: 926.
-
(1983)
J Chem Phys
, vol.79
, pp. 926
-
-
Jorgensen, W.L.1
Chandrasekhar, J.2
Madura, J.D.3
-
41
-
-
33646940952
-
Numerical integration of the cartesian equations of motion of a system with constraints: Molecular dynamics of n-alkanes
-
Ryckaert J, Ciccotti G, Berendsen H (1977) Numerical integration of the cartesian equations of motion of a system with constraints: molecular dynamics of n-alkanes. J Comput Phys 23: 327-341.
-
(1977)
J Comput Phys
, vol.23
, pp. 327-341
-
-
Ryckaert, J.1
Ciccotti, G.2
Berendsen, H.3
-
42
-
-
33846823909
-
Particle mesh ewald-an nlog(n) method for ewald sums in large systems
-
Darden T, York D, Pederson L (1993) Particle mesh ewald-an nlog(n) method for ewald sums in large systems. J Chem Phys 98: 10089-10092.
-
(1993)
J Chem Phys
, vol.98
, pp. 10089-10092
-
-
Darden, T.1
York, D.2
Pederson, L.3
-
43
-
-
27344454932
-
Gromacs: Fast, flexible, and free
-
Van Der Spoel D, Lindahl E, Hess B, Groenhof G, Mark AE, et al. (2005) GROMACS: fast, flexible, and free. J Comput Chem 26: 1701-1718.
-
(2005)
J Comput Chem
, vol.26
, pp. 1701-1718
-
-
Van Der Spoel, D.1
Lindahl, E.2
Hess, B.3
Groenhof, G.4
Mark, A.E.5
-
44
-
-
0034193510
-
Protein docking using spherical polar fourier correlations
-
Ritchie DW, Kemp GJ (2000) Protein docking using spherical polar Fourier correlations. Proteins 39: 178-194.
-
(2000)
Proteins
, vol.39
, pp. 178-194
-
-
Ritchie, D.W.1
Kemp, G.J.2
-
45
-
-
0043245780
-
Insights into protein-protein binding by binding free energy calculation and free energy decomposition for the ras-raf and ras-ralgds complexes
-
Gohlke H, Kiel C, Case DA (2003) Insights into protein-protein binding by binding free energy calculation and free energy decomposition for the Ras-Raf and Ras-RalGDS complexes. J Mol Biol 330: 891-913.
-
(2003)
J Mol Biol
, vol.330
, pp. 891-913
-
-
Gohlke, H.1
Kiel, C.2
Case, D.A.3
-
46
-
-
14244273182
-
Theory and applications of the generalized born solvation model in macromolecular simulations
-
Tsui V, Case DA (2000) Theory and applications of the generalized Born solvation model in macromolecular simulations. Biopolymers 56: 275-291.
-
(2000)
Biopolymers
, vol.56
, pp. 275-291
-
-
Tsui, V.1
Case, D.A.2
-
47
-
-
3042934967
-
Tissue sulfhydryl groups
-
Ellman GL (1959) Tissue sulfhydryl groups. Arch Biochem Biophys 82: 70-77.
-
(1959)
Arch Biochem Biophys
, vol.82
, pp. 70-77
-
-
Ellman, G.L.1
-
48
-
-
0034614404
-
Maturation and specificity of plasmodium falciparum subtilisin-like protease-1, a malaria merozoite subtilisinlike serine protease
-
Sajid M, Withers-Martinez C, Blackman MJ (2000) Maturation and specificity of Plasmodium falciparum subtilisin-like protease-1, a malaria merozoite subtilisinlike serine protease. J Biol Chem 275: 631-641.
-
(2000)
J Biol Chem
, vol.275
, pp. 631-641
-
-
Sajid, M.1
Withers-Martinez, C.2
Blackman, M.J.3
-
49
-
-
0026632573
-
Intramolecular mapping of plasmodium falciparum p126 proteolytic fragments by n-terminal amino acid sequencing
-
Debrabant A, Maes P, Delplace P, Dubremetz JF, Tartar A, et al. (1992) Intramolecular mapping of Plasmodium falciparum P126 proteolytic fragments by N-terminal amino acid sequencing. Molecular and Biochemical Parasitology 53: 89-96.
-
(1992)
Molecular and Biochemical Parasitology
, vol.53
, pp. 89-96
-
-
Debrabant, A.1
Maes, P.2
Delplace, P.3
Dubremetz, J.F.4
Tartar, A.5
-
50
-
-
0028114015
-
Nterminal amino acid sequence of the plasmodium falciparum merozoite surface protein-1 polypeptides
-
Stafford WH, Blackman MJ, Harris A, Shai S, Grainger M, et al. (1994) Nterminal amino acid sequence of the Plasmodium falciparum merozoite surface protein-1 polypeptides. Mol Biochem Parasitol 66: 157-160.
-
(1994)
Mol Biochem Parasitol
, vol.66
, pp. 157-160
-
-
Stafford, W.H.1
Blackman, M.J.2
Harris, A.3
Shai, S.4
Grainger, M.5
-
51
-
-
0024590266
-
The nterminal amino acid sequences of the plasmodium falciparum (FCBI) merozoite surface antigen of 42 and 36 kilodaltons, both derived from the 185-195 kilodalton precursor
-
Heidrich HG, Miettinin-Bauman A, Eckerskorn C, Lottspeich F (1989) The Nterminal amino acid sequences of the Plasmodium falciparum (FCBI) merozoite surface antigen of 42 and 36 kilodaltons, both derived from the 185-195 kilodalton precursor Molecular and Biochemical Parasitology 34: 147-154.
-
(1989)
Molecular and Biochemical Parasitology
, vol.34
, pp. 147-154
-
-
Heidrich, H.G.1
Miettinin-Bauman, A.2
Eckerskorn, C.3
Lottspeich, F.4
|