Structures of phage-display peptides that bind to the malarial surface protein, apical membrane antigen 1, and block erythrocyte invasion

Biochemistry

Volumn 42, Issue 33, 2003, Pages 9915-9923

  Keizer, David W ^a   Miles, Luke A ^a,b   Li, Felomena ^c   Nair, Margie ^b   Anders, Robin F ^c   Coley, Andrew M ^c   Foley, Michael ^a,c   Norton, Raymond S ^a,b  

^a WALTER AND ELIZA HALL INSTITUTE OF MEDICAL RESEARCH   (Australia)

^b CSIRO   (Australia)

^c LA TROBE UNIVERSITY   (Australia)

Author keywords

[No Author keywords available]

Indexed keywords

ANTIGENS; CELL MEMBRANES; GROWTH KINETICS; NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY; POLYPEPTIDES; STRUCTURE (COMPOSITION); SYNTHESIS (CHEMICAL);

MEROZITE INVASIONS;

PROTEINS;

APICAL MEMBRANE ANTIGEN 1; BINDING PROTEIN; EPIDERMAL GROWTH FACTOR; MEMBRANE ANTIGEN; MEMBRANE PROTEIN; PEPTIDE; PEPTIDE F1; PEPTIDE F2; TRANSFORMING GROWTH FACTOR BETA; UNCLASSIFIED DRUG;

ARTICLE; BINDING AFFINITY; BINDING KINETICS; CARBOXY TERMINAL SEQUENCE; CELL INVASION; ENZYME LINKED IMMUNOSORBENT ASSAY; ERYTHROCYTE; INHIBITION KINETICS; MEROZOITE; NONHUMAN; NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY; PHAGE DISPLAY; PLASMODIUM FALCIPARUM; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN BINDING; PROTEIN MOTIF; PROTEIN PROTEIN INTERACTION; PROTEIN SECONDARY STRUCTURE; PROTEIN STRUCTURE; PROTEIN SYNTHESIS; SEQUENCE ANALYSIS; SEQUENCE HOMOLOGY; STRUCTURE ANALYSIS;

ALANINE; AMINO ACID SEQUENCE; ANIMALS; ANTIGENS, PROTOZOAN; ANTIGENS, SURFACE; BACTERIOPHAGES; BINDING, COMPETITIVE; ENZYME-LINKED IMMUNOSORBENT ASSAY; ERYTHROCYTES; HUMANS; MALARIA; MEMBRANE PROTEINS; MOLECULAR SEQUENCE DATA; MUTAGENESIS, SITE-DIRECTED; PEPTIDE FRAGMENTS; PEPTIDE LIBRARY; PLASMODIUM FALCIPARUM; PROTEIN CONFORMATION; PROTOZOAN PROTEINS; RECOMBINANT PROTEINS;

PLASMODIUM FALCIPARUM; PROTOZOA;

EID: 0042473228     PISSN: 00062960     EISSN: None     Source Type: Journal    
DOI: 10.1021/bi034376b     Document Type: Article

References (61)

1. Li, F., Dluzewski, A. R., Coley, A. M., Thomas, A. W., Tilley, L., Anders, R. F., and Foley, M. (2002) J. Biol. Chem. 277, 50303-50310.
2. Peterson, M. G., Marshall, V. M., Smythe, J. A., Crewther, P. E., Lew, A., Silva, A., Anders, R. F., and Kemp, D. J. (1989) Mol. Cell. Biol. 9, 3151-3154.
3. Peterson, M. G., Nguyen-Dinh, P., Marshall, V. M., Elliott, J. F., Collins, W. E., Anders, R. F., and Kemp, D. J. (1990) Mol. Biochem. Parasitol. 39, 279-283.
4. Thomas, A. W., Bannister, L. H., and Waters, A. P. (1990) Parasite Immunol. 12, 105-113.
5. Waters, A. P., Thomas, A. W., Deans, J. A., Mitchell, G. H., Hudson, D. E., Miller, L. H., McCutchan, T. F., and Cohen, S. (1990) J. Biol. Chem. 265, 17974-17979.
6. Chitnis, C. E., and Blackman, M. J. (2000) Parasitol. Today 16, 411-415.
7. Deans, J. A., Knight, A. M., Jean, W. C., Waters, A. P., Cohen, S., and Mitchell, G. H. (1988) Parasite Immunol. 10, 535-552.
8. Collins, W. E., Pye, D., Crewther, P. E., Vandenberg, K. L., Galland, G. G., Sulzer, A. J., Kemp, D. J., Edwards, S. J., Coppel, R. L., and Sullivan, J. S. (1994) Am. J. Trop. Med. Hyg. 51, 711-719.
9. Crewther, P. E., Matthew, M. L., Flegg, R. H., and Anders, R. F. (1996) Infect. Immun. 64, 3310-3317.
10. Anders, R. F., Crewther, P. E., Edwards, S., Margetts, M., Matthew, M. L., Pollock, B., and Pye, D. (1998) Vaccine 16, 240-247.
11. Deans, J. A., Alderson, T., Thomas, A. W., Mitchell, G. H., Lennox, E. S., and Cohen, S. (1982) Clin. Exp. Immunol. 49, 297-309.
12. Thomas, A. W., Deans, J. A., Mitchell, G. H., Alderson, T., and Cohen, S. (1984) Mol. Biochem. Parasitol. 13, 187-199.
13. Kocken, C. H., Hundt, E., Knapp, B., Brazel, D., Enders, B., Narum, D. L., Wubben, J. A., and Thomas, A. W. (1998) Infect. Immun. 66, 373-375.
14. Narum, D. L., Ogun, S. A., Thomas, A. W., and Holder, A. A. (2000) Infect. Immun. 68, 2899-2906.
15. Triglia, T., Healer, J., Caruana, S. R., Hodder, A. N., Anders, R. F., Crabb, B. S., and Cowman, A. F. (2000) Mol. Microbiol. 38, 706-718.
16. Hehl, A. B., Lekutis, C., Grigg, M. E., Bradley, P. J., Dubremetz, J. F., Ortega-Barria, E., and Boothroyd, J. C. (2000) Infect. Immun. 68, 7078-7086.
17. Donahue, C. G., Carruthers, V. B., Gilk, S. D., and Ward, G. E. (2000) Mol. Biochem. Parasitol. 111, 15-30.
18. Pasqualini, R., and Ruoslahti, E. (1996) Mol. Psychiatry 1, 423.
19. Jost, P. J., Harbottle, R. P., Knight, A., Miller, A. D., Coutelle, C., and Schneider, H. (2001) FEBS Lett. 489, 263-269.
20. Isalan, M., Patel, S. D., Balasubramanian, S., and Choo, Y. (2001) Biochemistry 40, 830-836.
21. Lesinski, G. B., Smithson, S. L., Srivastava, N., Chen, D., Widera, G., and Westerink, M. A. (2001) Vaccine 19, 1717-1726.
22. McConnell, S. J., Kendall, M. L., Reilly, T. M., and Hoess, R. H. (1994) Gene 151, 115-118.
23. Skelton, N. J., Chen, Y. M., Dubree, N., Quan, C., Jackson, D. Y., Cochran, A., Zobel, K., Deshayes, K., Baca, M., Pisabarro, M. T., and Lowman, H. B. (2001) Biochemistry 40, 8487-8498.
24. Lowman, H. B., Chen, Y. M., Skelton, N. J., Mortensen, D. L., Tomlinson, E. E., Sadick, M. D., Robinson, I. C., and Clark, R. G. (1998) Biochemistry 37, 8870-8878.
25. Fairbrother, W. J., Christinger, H. W., Cochran, A. G., Fuh, G., Keenan, C. J., Quan, C., Shriver, S. K., Tom, J. Y., Wells, J. A., and Cunningham, B. C. (1998) Biochemistry 37, 17754-17764.
26. Trager, W., and Jensen, J. B. (1976) Science 193, 673-675.
27. Dluzewski, A. R., Ling, I. T., Rangachari, K., Bates, P. A., and Wilson, R. J. M. (1984) Trans. R. Soc. Trop. Med. Hyg. 78, 622-624.
28. Bax, A., Griffey, R. H., and Hawkins, B. L. (1983) J. Magn. Reson. 55, 301-315.
29. Muller, L. (1979) J. Am. Chem. Soc. 101, 4481-4484.
30. Gibbs, S. J., and Johnson, C. S. (1991) J. Magn. Reson. 93, 395-402.
31. Dingley, A. J., Mackay, J. P., Chapman, B. E., Morris, M. B., Kuchel, P. W., Hambly, B. D., and King, G. F. (1995) J. Biomol. NMR 6, 321-328.
32. Yao, S., Howlett, G. J., and Norton, R. S. (2000) J. Biomol. NMR 16, 109-119.
33. Bartels, C., Xia, T. H., Billeter, M., Güntert, P., and Wüthrich, K. (1995) J. Biomol. NMR 6, 1-10.
34. Seavey, B. R., Farr, E. A., Westler, W. M., and Markley, J. L. (1991) J. Biomol. NMR 1, 217-236.
35. Baxter, N. J., and Williamson, M. P. (1997) J. Biomol. NMR 9, 359-369.
36. Güntert, P., Mumenthaler, C., and Wüthrich, K. (1997) J. Mol. Biol. 273, 283-298.
37. Brünger, A. T., Adams, P. D., Clore, G. M., DeLano, W. L., Gros, P., Grosse-Kunstleve, R. W., Jiang, J. S., Kuszewski, J., Nilges, M., Pannu, N. S., Read, R. J., Rice, L. M., Simonson, T., and Warren, G. L. (1998) Acta Crystallogr. D54, 905-921.
38. Linge, J. P., and Nilges, M. (1999) J. Biomol. NMR 13, 51-59.
39. Laskowski, R. A., Rullmannn, J. A., MacArthur, M. W., Kaptein, R., and Thornton, J. M. (1996) J. Biomol. NMR 8, 477-486.
40. Koradi, R., Billeter, M., and Wüthrich, K. (1996) J. Mol. Graphics 14, 51-55.
41. Altschul, S. F., Madden, T. L., Schaffer, A. A., Zhang, J., Zhang, Z., Miller, W., and Lipman, D. J. (1997) Nucleic Acids Res. 25, 3389-3402.
42. Kanzaki, T., Olofsson, A., Moren, A., Wernstedt, C., Hellman, U., Miyazono, K., Claesson-Welsh, L., and Heldin, C. H. (1990) Cell 61, 1051-1061.
43. Oklu, R., and Hesketh, R. (2000) Biochem. J. 352, 601-610.
44. Wishart, D. S., Sykes, B. D., and Richards, F. M. (1992) Biochemistry 31, 1647-1651.
45. Hansen, P. E., Kem, W. R., Bieber, A. L., and Norton, R. S. (1992) Eur. J. Biochem. 210, 231-240.
46. Norton, R. S., Cross, K., Braach-Maksvytis, V., and Wachter, E. (1993) Biochem. J. 293, 545-551.
47. Pallaghy, P. K., Duggan, B. M., Pennington, M. W., and Norton, R. S. (1993) J. Mol. Biol. 234, 405-420.
48. Manoleras, N., and Norton, R. S. (1994) Biochemistry 33, 11051-11061.
49. Tudor, J. E., Pallaghy, P. K., Pennington, M. W., and Norton, R. S. (1996) Nat. Struct. Biol. 3, 317-320.
50. Tudor, J. E., Pennington, M. W., and Norton, R. S. (1998) Eur. J. Biochem. 251, 133-141.
51. Barnham, K. J., Dyke, T. R., Kem, W. R., and Norton, R. S. (1997) J. Mol. Biol. 268, 886-902.
52. Hill, J. M., Alewood, P. F., and Craik, D. J. (1996) Biochemistry 35, 8824-8835.
53. Kocken, C. H., van der Wel, A. M., Dubbeld, M. A., Narum, D. L., van de Rijke, F. M., van Gemert, G. J., van der Linde, X., Bannister, L. H., Janse, C., Waters, A. P., and Thomas, A. W. (1998) J. Biol. Chem. 273, 15119-15124.
54. Muranyi, A., Finn, B. E., Gippert, G. P., Forsen, S., Stenflo, J., and Drakenberg, T. (1998) Biochemistry 37, 10605-10615.
55. Baron, M., Norman, D. G., Harvey, T. S., Handford, P. A., Mayhew, M., Tse, A. G., Brownlee, G. G., and Campbell, I. D. (1992) Protein Sci. 1, 81-90.
56. Berman, H. M., Westbrook, J., Feng, Z., Gilliland, G., Bhat, T. N., Weissig, H., Shindyalov, I. N., and Boume, P. E. (2000) Nucleic Acids Res. 28, 235-242.
57. Schrag, J. D., and Cygler, M. (1993) J. Mol. Biol. 230, 575-591.
58. Hansen, J. L., Ippolito, J. A., Ban, N., Nissen, P., Moore, P. B., and Steitz, T. A. (2002) Mol. Cell 10, 117-128.
59. Golebiowski, A., Klopfenstein, S. R., and Portlock, D. E. (2001) Curr. Opin. Drug Discovery Dev. 4, 428-434.
60. Eguchi, M., Shen, R. Y., Shea, J. P., Lee, M. S., and Kahn, M. (2002) J. Med. Chem. 45, 1395-1398.
61. Merutka, G., Dyson, H. J., and Wright, P. E. (1995) J. Biomol. NMR 5, 14-24.