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Volumn 20, Issue 10, 2014, Pages 579-588

The current epidemiology and clinical decisions surrounding acute respiratory infections

Author keywords

Genomics; Host pathogen interaction; Viral respiratory infection

Indexed keywords

BIOLOGICAL MARKER; MICRORNA;

EID: 84908138538     PISSN: 14714914     EISSN: 1471499X     Source Type: Journal    
DOI: 10.1016/j.molmed.2014.08.001     Document Type: Review
Times cited : (44)

References (110)
  • 1
    • 2942659231 scopus 로고    scopus 로고
    • Acute respiratory symptoms in adults in general practice
    • Hong C.Y., et al. Acute respiratory symptoms in adults in general practice. Fam. Pract. 2004, 21:317-323.
    • (2004) Fam. Pract. , vol.21 , pp. 317-323
    • Hong, C.Y.1
  • 2
    • 57349149486 scopus 로고    scopus 로고
    • Viral infection in adults hospitalized with community-acquired pneumonia: prevalence, pathogens, and presentation
    • Johnstone J., et al. Viral infection in adults hospitalized with community-acquired pneumonia: prevalence, pathogens, and presentation. Chest 2008, 134:1141-1148.
    • (2008) Chest , vol.134 , pp. 1141-1148
    • Johnstone, J.1
  • 3
    • 0036161819 scopus 로고    scopus 로고
    • Antibiotic prescribing in ambulatory care settings for adults with colds, upper respiratory tract infections, and bronchitis
    • Cantrell R., et al. Antibiotic prescribing in ambulatory care settings for adults with colds, upper respiratory tract infections, and bronchitis. Clin. Ther. 2002, 24:170-182.
    • (2002) Clin. Ther. , vol.24 , pp. 170-182
    • Cantrell, R.1
  • 4
    • 84890332490 scopus 로고    scopus 로고
    • Antibiotic prescribing for adults in ambulatory care in the USA, 2007-09
    • Shapiro D.J., et al. Antibiotic prescribing for adults in ambulatory care in the USA, 2007-09. J. Antimicrob. Chemother. 2014, 69:234-240.
    • (2014) J. Antimicrob. Chemother. , vol.69 , pp. 234-240
    • Shapiro, D.J.1
  • 5
    • 0034958947 scopus 로고    scopus 로고
    • Epidemiology of severe sepsis in the United States: analysis of incidence, outcome, and associated costs of care
    • Angus D., et al. Epidemiology of severe sepsis in the United States: analysis of incidence, outcome, and associated costs of care. Crit. Care Med. 2001, 29:1303-1310.
    • (2001) Crit. Care Med. , vol.29 , pp. 1303-1310
    • Angus, D.1
  • 6
    • 0030983002 scopus 로고    scopus 로고
    • Resistant pneumococci: protecting patients through judicious use of antibiotics
    • Dowell S.F., Schwartz B. Resistant pneumococci: protecting patients through judicious use of antibiotics. Am. Fam. Physician 1997, 55:1647-1654.
    • (1997) Am. Fam. Physician , vol.55 , pp. 1647-1654
    • Dowell, S.F.1    Schwartz, B.2
  • 7
    • 0027531810 scopus 로고
    • Resistance to antimicrobial drugs: a worldwide calamity
    • Kunin C.M. Resistance to antimicrobial drugs: a worldwide calamity. Ann. Intern. Med. 1993, 118:557-561.
    • (1993) Ann. Intern. Med. , vol.118 , pp. 557-561
    • Kunin, C.M.1
  • 8
    • 0026760182 scopus 로고
    • The crisis in antibiotic resistance
    • Neu H.C. The crisis in antibiotic resistance. Science 1992, 257:1064-1073.
    • (1992) Science , vol.257 , pp. 1064-1073
    • Neu, H.C.1
  • 9
    • 0026705492 scopus 로고
    • Epidemiology of drug resistance: implications for a post-antimicrobial era
    • Cohen M.L. Epidemiology of drug resistance: implications for a post-antimicrobial era. Science 1992, 257:1050-1055.
    • (1992) Science , vol.257 , pp. 1050-1055
    • Cohen, M.L.1
  • 10
    • 84892450466 scopus 로고    scopus 로고
    • Appropriate international measures for outpatient antibiotic prescribing and consumption: recommendations from a national data comparison of different measures
    • Coenen S., et al. Appropriate international measures for outpatient antibiotic prescribing and consumption: recommendations from a national data comparison of different measures. J. Antimicrob. Chemother. 2014, 69:529-534.
    • (2014) J. Antimicrob. Chemother. , vol.69 , pp. 529-534
    • Coenen, S.1
  • 11
    • 0037062141 scopus 로고    scopus 로고
    • Azithromycin for acute bronchitis: a randomised, double-blind, controlled trial
    • Evans A., et al. Azithromycin for acute bronchitis: a randomised, double-blind, controlled trial. Lancet 2002, 359:1648-1654.
    • (2002) Lancet , vol.359 , pp. 1648-1654
    • Evans, A.1
  • 12
    • 0037059950 scopus 로고    scopus 로고
    • Antibiotics for common respiratory tract infections in adults
    • Hirschmann J. Antibiotics for common respiratory tract infections in adults. Arch. Intern. Med. 2002, 162:256-264.
    • (2002) Arch. Intern. Med. , vol.162 , pp. 256-264
    • Hirschmann, J.1
  • 13
    • 68049123110 scopus 로고    scopus 로고
    • A prospective study of the diagnostic utility of sputum Gram stain in pneumonia
    • Anevlavis S., et al. A prospective study of the diagnostic utility of sputum Gram stain in pneumonia. J. Infect. 2009, 59:83-89.
    • (2009) J. Infect. , vol.59 , pp. 83-89
    • Anevlavis, S.1
  • 14
    • 20044394019 scopus 로고    scopus 로고
    • Value of intensive diagnostic microbiological investigation in low- and high-risk patients with community-acquired pneumonia
    • van der Eerden M.M., et al. Value of intensive diagnostic microbiological investigation in low- and high-risk patients with community-acquired pneumonia. Eur. J. Clin. Microbiol. Infect. Dis. 2005, 24:241-249.
    • (2005) Eur. J. Clin. Microbiol. Infect. Dis. , vol.24 , pp. 241-249
    • van der Eerden, M.M.1
  • 15
    • 84878273242 scopus 로고    scopus 로고
    • Carriage of Mycoplasma pneumoniae in the upper respiratory tract of symptomatic and asymptomatic children: an observational study
    • Spuesens E.B., et al. Carriage of Mycoplasma pneumoniae in the upper respiratory tract of symptomatic and asymptomatic children: an observational study. PLoS Med. 2013, 10:e1001444.
    • (2013) PLoS Med. , vol.10 , pp. e1001444
    • Spuesens, E.B.1
  • 16
    • 84866493893 scopus 로고    scopus 로고
    • Performance of five FDA-approved rapid antigen tests in the detection of 2009 H1N1 influenza A virus
    • Sutter D.E., et al. Performance of five FDA-approved rapid antigen tests in the detection of 2009 H1N1 influenza A virus. J. Med. Virol. 2012, 84:1699-1702.
    • (2012) J. Med. Virol. , vol.84 , pp. 1699-1702
    • Sutter, D.E.1
  • 17
    • 84878235941 scopus 로고    scopus 로고
    • Comparison of four multiplex PCR assays for the detection of viral pathogens in respiratory specimens
    • Anderson T.P., et al. Comparison of four multiplex PCR assays for the detection of viral pathogens in respiratory specimens. J. Virol. Methods 2013, 191:118-121.
    • (2013) J. Virol. Methods , vol.191 , pp. 118-121
    • Anderson, T.P.1
  • 18
    • 84870932152 scopus 로고    scopus 로고
    • Comparison of three multiplex PCR assays for the detection of respiratory viral infections: evaluation of xTAG respiratory virus panel fast assay, RespiFinder 19 assay and RespiFinder SMART 22 assay
    • Dabisch-Ruthe M., et al. Comparison of three multiplex PCR assays for the detection of respiratory viral infections: evaluation of xTAG respiratory virus panel fast assay, RespiFinder 19 assay and RespiFinder SMART 22 assay. BMC Infect. Dis. 2012, 12:163.
    • (2012) BMC Infect. Dis. , vol.12 , pp. 163
    • Dabisch-Ruthe, M.1
  • 19
    • 84908376615 scopus 로고    scopus 로고
    • Comparison of two multiplex PCR assays for the detection of respiratory viral infections
    • Kim H., et al. Comparison of two multiplex PCR assays for the detection of respiratory viral infections. Clin. Respir. J. 2013, 10.1111/crj.12083.
    • (2013) Clin. Respir. J.
    • Kim, H.1
  • 20
    • 84876771767 scopus 로고    scopus 로고
    • Comparison of the Biofire FilmArray RP, Genmark eSensor RVP, Luminex xTAG RVPv1, and Luminex xTAG RVP fast multiplex assays for detection of respiratory viruses
    • Popowitch E.B., et al. Comparison of the Biofire FilmArray RP, Genmark eSensor RVP, Luminex xTAG RVPv1, and Luminex xTAG RVP fast multiplex assays for detection of respiratory viruses. J. Clin. Microbiol. 2013, 51:1528-1533.
    • (2013) J. Clin. Microbiol. , vol.51 , pp. 1528-1533
    • Popowitch, E.B.1
  • 21
    • 79959835814 scopus 로고    scopus 로고
    • Frequent detection of respiratory viruses without symptoms: toward defining clinically relevant cutoff values
    • Jansen R.R., et al. Frequent detection of respiratory viruses without symptoms: toward defining clinically relevant cutoff values. J. Clin. Microbiol. 2011, 49:2631-2636.
    • (2011) J. Clin. Microbiol. , vol.49 , pp. 2631-2636
    • Jansen, R.R.1
  • 22
    • 84908144424 scopus 로고
    • The blood sedimentation test; its history, technique, nature and clinical application
    • Waugh T.R. The blood sedimentation test; its history, technique, nature and clinical application. Can. Med. Assoc. J. 1923, 13:604-608.
    • (1923) Can. Med. Assoc. J. , vol.13 , pp. 604-608
    • Waugh, T.R.1
  • 23
    • 85021062648 scopus 로고
    • Serological reactions in pneumonia with a non-protein somatic fraction of Pneumococcus
    • Tillett W.S., Francis T. Serological reactions in pneumonia with a non-protein somatic fraction of Pneumococcus. J. Exp. Med. 1930, 52:561-571.
    • (1930) J. Exp. Med. , vol.52 , pp. 561-571
    • Tillett, W.S.1    Francis, T.2
  • 24
    • 77649227710 scopus 로고    scopus 로고
    • Sepsis redefined: the search for surrogate markers
    • Tsalik E.L., Woods C.W. Sepsis redefined: the search for surrogate markers. Int. J. Antimicrob. Agents 2009, 34(Suppl. 4):S16-S20.
    • (2009) Int. J. Antimicrob. Agents , vol.34 , pp. S16-S20
    • Tsalik, E.L.1    Woods, C.W.2
  • 25
    • 0027466275 scopus 로고
    • High serum procalcitonin concentrations in patients with sepsis and infection
    • Assicot M., et al. High serum procalcitonin concentrations in patients with sepsis and infection. Lancet 1993, 341:515-518.
    • (1993) Lancet , vol.341 , pp. 515-518
    • Assicot, M.1
  • 26
    • 0035140323 scopus 로고    scopus 로고
    • Ubiquitous expression of the calcitonin-i gene in multiple tissues in response to sepsis
    • Muller B., et al. Ubiquitous expression of the calcitonin-i gene in multiple tissues in response to sepsis. J. Clin. Endocrinol. Metab. 2001, 86:396-404.
    • (2001) J. Clin. Endocrinol. Metab. , vol.86 , pp. 396-404
    • Muller, B.1
  • 27
    • 84866047109 scopus 로고    scopus 로고
    • New biomarkers sought for improving sepsis management and care
    • Moyer M.W. New biomarkers sought for improving sepsis management and care. Nat. Med. 2012, 18:999.
    • (2012) Nat. Med. , vol.18 , pp. 999
    • Moyer, M.W.1
  • 28
    • 84876708502 scopus 로고    scopus 로고
    • Procalcitonin as a diagnostic marker for sepsis: a systematic review and meta-analysis
    • Wacker C., et al. Procalcitonin as a diagnostic marker for sepsis: a systematic review and meta-analysis. Lancet Infect. Dis. 2013, 13:426-435.
    • (2013) Lancet Infect. Dis. , vol.13 , pp. 426-435
    • Wacker, C.1
  • 29
    • 0028575739 scopus 로고
    • Procalcitonin increase after endotoxin injection in normal subjects
    • Dandona P., et al. Procalcitonin increase after endotoxin injection in normal subjects. J. Clin. Endocrinol. Metab. 1994, 79:1605-1608.
    • (1994) J. Clin. Endocrinol. Metab. , vol.79 , pp. 1605-1608
    • Dandona, P.1
  • 30
    • 84873044315 scopus 로고    scopus 로고
    • Procalcitonin to initiate or discontinue antibiotics in acute respiratory tract infections
    • Schuetz P., et al. Procalcitonin to initiate or discontinue antibiotics in acute respiratory tract infections. Cochrane Database Syst. Rev. 2012, 9:CD007498.
    • (2012) Cochrane Database Syst. Rev. , vol.9 , pp. CD007498
    • Schuetz, P.1
  • 31
    • 0242295767 scopus 로고    scopus 로고
    • Bayesian factor regression models in the 'large p, small n' paradigm
    • West M. Bayesian factor regression models in the 'large p, small n' paradigm. Bayesian Stat. 2003, 7:723-732.
    • (2003) Bayesian Stat. , vol.7 , pp. 723-732
    • West, M.1
  • 32
    • 62549125109 scopus 로고    scopus 로고
    • High-dimensional sparse factor modeling: applications in gene expression genomics
    • Carvalho C.M., et al. High-dimensional sparse factor modeling: applications in gene expression genomics. J. Am. Stat. Assoc. 2008, 103:1438-1456.
    • (2008) J. Am. Stat. Assoc. , vol.103 , pp. 1438-1456
    • Carvalho, C.M.1
  • 33
    • 79952129490 scopus 로고    scopus 로고
    • Detection of viruses via statistical gene expression analysis
    • Chen M., et al. Detection of viruses via statistical gene expression analysis. IEEE Trans. Biomed. Eng. 2011, 58:468-479.
    • (2011) IEEE Trans. Biomed. Eng. , vol.58 , pp. 468-479
    • Chen, M.1
  • 34
    • 84890150819 scopus 로고    scopus 로고
    • Functional robust support vector machines for sparse and irregular longitudinal data
    • Wu Y., Liu Y. Functional robust support vector machines for sparse and irregular longitudinal data. J. Comput. Graph. Stat. 2013, 22:379-395.
    • (2013) J. Comput. Graph. Stat. , vol.22 , pp. 379-395
    • Wu, Y.1    Liu, Y.2
  • 35
    • 70149096300 scopus 로고    scopus 로고
    • A penalized matrix decomposition, with applications to sparse principal components and canonical correlation analysis
    • Witten D.M., et al. A penalized matrix decomposition, with applications to sparse principal components and canonical correlation analysis. Biostatistics 2009, 10:515-534.
    • (2009) Biostatistics , vol.10 , pp. 515-534
    • Witten, D.M.1
  • 36
    • 84896921824 scopus 로고    scopus 로고
    • Democratizing systems immunology with modular transcriptional repertoire analyses
    • Chaussabel D., Baldwin N. Democratizing systems immunology with modular transcriptional repertoire analyses. Nat. Rev. Immunol. 2014, 14:271-280.
    • (2014) Nat. Rev. Immunol. , vol.14 , pp. 271-280
    • Chaussabel, D.1    Baldwin, N.2
  • 37
    • 76249091272 scopus 로고    scopus 로고
    • Genomic transcriptional profiling identifies a candidate blood biomarker signature for the diagnosis of septicemic melioidosis
    • Pankla R., et al. Genomic transcriptional profiling identifies a candidate blood biomarker signature for the diagnosis of septicemic melioidosis. Genome Biol. 2009, 10:R127.
    • (2009) Genome Biol. , vol.10 , pp. R127
    • Pankla, R.1
  • 38
    • 84879414041 scopus 로고    scopus 로고
    • Systems virology: host-directed approaches to viral pathogenesis and drug targeting
    • Law G.L., et al. Systems virology: host-directed approaches to viral pathogenesis and drug targeting. Nat. Rev. Microbiol. 2013, 11:455-466.
    • (2013) Nat. Rev. Microbiol. , vol.11 , pp. 455-466
    • Law, G.L.1
  • 39
    • 84887614216 scopus 로고    scopus 로고
    • Systems approaches to influenza-virus host interactions and the pathogenesis of highly virulent and pandemic viruses
    • Korth M.J., et al. Systems approaches to influenza-virus host interactions and the pathogenesis of highly virulent and pandemic viruses. Semin. Immunol. 2013, 25:228-239.
    • (2013) Semin. Immunol. , vol.25 , pp. 228-239
    • Korth, M.J.1
  • 40
    • 84883722016 scopus 로고    scopus 로고
    • Use of the Corus(R) CAD Gene Expression Test for assessment of obstructive coronary artery disease likelihood in symptomatic non-diabetic patients
    • Vargas J., et al. Use of the Corus(R) CAD Gene Expression Test for assessment of obstructive coronary artery disease likelihood in symptomatic non-diabetic patients. PLoS Curr. 2013, 5.
    • (2013) PLoS Curr. , vol.5
    • Vargas, J.1
  • 41
    • 44849110695 scopus 로고    scopus 로고
    • Gene expression signatures of radiation response are specific, durable and accurate in mice and humans
    • Meadows S.K., et al. Gene expression signatures of radiation response are specific, durable and accurate in mice and humans. PLoS ONE 2008, 3:e1912.
    • (2008) PLoS ONE , vol.3 , pp. e1912
    • Meadows, S.K.1
  • 42
    • 15944395145 scopus 로고    scopus 로고
    • Insights into host responses against pathogens from transcriptional profiling
    • Jenner R.G., Young R.A. Insights into host responses against pathogens from transcriptional profiling. Nat. Rev. Microbiol. 2005, 3:281-294.
    • (2005) Nat. Rev. Microbiol. , vol.3 , pp. 281-294
    • Jenner, R.G.1    Young, R.A.2
  • 43
    • 0037154274 scopus 로고    scopus 로고
    • Stereotyped and specific gene expression programs in human innate immune responses to bacteria
    • Boldrick J.C., et al. Stereotyped and specific gene expression programs in human innate immune responses to bacteria. Proc. Natl. Acad. Sci. U.S.A. 2002, 99:972-977.
    • (2002) Proc. Natl. Acad. Sci. U.S.A. , vol.99 , pp. 972-977
    • Boldrick, J.C.1
  • 44
    • 0141446081 scopus 로고    scopus 로고
    • Molecular characterization of the acute inflammatory response to infections with gram-negative versus gram-positive bacteria
    • Feezor R.J., et al. Molecular characterization of the acute inflammatory response to infections with gram-negative versus gram-positive bacteria. Infect. Immun. 2003, 71:5803-5813.
    • (2003) Infect. Immun. , vol.71 , pp. 5803-5813
    • Feezor, R.J.1
  • 45
    • 33845901291 scopus 로고    scopus 로고
    • Whole blood gene expression in infants with respiratory syncytial virus bronchiolitis
    • Fjaerli H.O., et al. Whole blood gene expression in infants with respiratory syncytial virus bronchiolitis. BMC Infect. Dis. 2006, 6:175.
    • (2006) BMC Infect. Dis. , vol.6 , pp. 175
    • Fjaerli, H.O.1
  • 46
    • 33847408050 scopus 로고    scopus 로고
    • Gene expression patterns in blood leukocytes discriminate patients with acute infections
    • Ramilo O., et al. Gene expression patterns in blood leukocytes discriminate patients with acute infections. Blood 2007, 109:2066-2077.
    • (2007) Blood , vol.109 , pp. 2066-2077
    • Ramilo, O.1
  • 47
    • 0035955425 scopus 로고    scopus 로고
    • The plasticity of dendritic cell responses to pathogens and their components
    • Huang Q., et al. The plasticity of dendritic cell responses to pathogens and their components. Science 2001, 294:870-875.
    • (2001) Science , vol.294 , pp. 870-875
    • Huang, Q.1
  • 48
    • 33645508930 scopus 로고    scopus 로고
    • Functional genomics of innate host defense molecules in normal human monocytes in response to Aspergillus fumigatus
    • Cortez K.J., et al. Functional genomics of innate host defense molecules in normal human monocytes in response to Aspergillus fumigatus. Infect. Immun. 2006, 74:2353-2365.
    • (2006) Infect. Immun. , vol.74 , pp. 2353-2365
    • Cortez, K.J.1
  • 49
    • 77953006998 scopus 로고    scopus 로고
    • Blood gene expression signatures predict invasive candidiasis
    • 21ra17
    • Zaas A.K., et al. Blood gene expression signatures predict invasive candidiasis. Sci. Transl. Med. 2010, 2:21ra17.
    • (2010) Sci. Transl. Med. , vol.2
    • Zaas, A.K.1
  • 50
    • 69949148793 scopus 로고    scopus 로고
    • Gene expression signatures diagnose influenza and other symptomatic respiratory viral infections in humans
    • Zaas A.K., et al. Gene expression signatures diagnose influenza and other symptomatic respiratory viral infections in humans. Cell Host Microbe 2009, 6:207-217.
    • (2009) Cell Host Microbe , vol.6 , pp. 207-217
    • Zaas, A.K.1
  • 51
    • 84879771268 scopus 로고    scopus 로고
    • An integrative framework for Bayesian variable selection with informative priors for identifying genes and pathways
    • Peng B., et al. An integrative framework for Bayesian variable selection with informative priors for identifying genes and pathways. PLoS ONE 2013, 8:e67672.
    • (2013) PLoS ONE , vol.8 , pp. e67672
    • Peng, B.1
  • 52
    • 79957830827 scopus 로고    scopus 로고
    • Expanding the understanding of biases in development of clinical-grade molecular signatures: a case study in acute respiratory viral infections
    • Lytkin N.I., et al. Expanding the understanding of biases in development of clinical-grade molecular signatures: a case study in acute respiratory viral infections. PLoS ONE 2011, 6:e20662.
    • (2011) PLoS ONE , vol.6 , pp. e20662
    • Lytkin, N.I.1
  • 53
    • 84872252677 scopus 로고    scopus 로고
    • A host transcriptional signature for presymptomatic detection of infection in humans exposed to influenza H1N1 or H3N2
    • Woods C.W., et al. A host transcriptional signature for presymptomatic detection of infection in humans exposed to influenza H1N1 or H3N2. PLoS ONE 2013, 8:e52198.
    • (2013) PLoS ONE , vol.8 , pp. e52198
    • Woods, C.W.1
  • 54
    • 80052320333 scopus 로고    scopus 로고
    • Temporal dynamics of host molecular responses differentiate symptomatic and asymptomatic influenza a infection
    • Huang Y., et al. Temporal dynamics of host molecular responses differentiate symptomatic and asymptomatic influenza a infection. PLoS Genet. 2011, 7:e1002234.
    • (2011) PLoS Genet. , vol.7 , pp. e1002234
    • Huang, Y.1
  • 55
    • 84888990746 scopus 로고    scopus 로고
    • Whole blood gene expression profiles to assess pathogenesis and disease severity in infants with respiratory syncytial virus infection
    • Mejias A., et al. Whole blood gene expression profiles to assess pathogenesis and disease severity in infants with respiratory syncytial virus infection. PLoS Med. 2013, 10:e1001549.
    • (2013) PLoS Med. , vol.10 , pp. e1001549
    • Mejias, A.1
  • 56
    • 33751384465 scopus 로고    scopus 로고
    • GATHER: a systems approach to interpreting genomic signatures
    • Chang J.T., Nevins J.R. GATHER: a systems approach to interpreting genomic signatures. Bioinformatics 2006, 22:2926-2933.
    • (2006) Bioinformatics , vol.22 , pp. 2926-2933
    • Chang, J.T.1    Nevins, J.R.2
  • 57
    • 0038005018 scopus 로고    scopus 로고
    • DAVID: Database for Annotation, Visualization, and Integrated Discovery
    • Dennis G., et al. DAVID: Database for Annotation, Visualization, and Integrated Discovery. Genome Biol. 2003, 4:R60.
    • (2003) Genome Biol. , vol.4 , pp. R60
    • Dennis, G.1
  • 58
    • 85032751071 scopus 로고    scopus 로고
    • High-dimensional longitudinal genomic data: an analysis used for monitoring viral infections
    • Carin L., et al. High-dimensional longitudinal genomic data: an analysis used for monitoring viral infections. IEEE Signal Process. Mag. 2012, 29:108-123.
    • (2012) IEEE Signal Process. Mag. , vol.29 , pp. 108-123
    • Carin, L.1
  • 59
    • 79959424627 scopus 로고    scopus 로고
    • Quantitative, high-resolution proteomics for data-driven systems biology
    • Cox J., Mann M. Quantitative, high-resolution proteomics for data-driven systems biology. Annu. Rev. Biochem. 2011, 80:273-299.
    • (2011) Annu. Rev. Biochem. , vol.80 , pp. 273-299
    • Cox, J.1    Mann, M.2
  • 60
    • 77952538049 scopus 로고    scopus 로고
    • Quantitation in mass-spectrometry-based proteomics
    • Schulze W.X., Usadel B. Quantitation in mass-spectrometry-based proteomics. Annu. Rev. Plant Biol. 2010, 61:491-516.
    • (2010) Annu. Rev. Plant Biol. , vol.61 , pp. 491-516
    • Schulze, W.X.1    Usadel, B.2
  • 61
    • 76649129549 scopus 로고    scopus 로고
    • Proteomics analysis of the nucleolus in adenovirus-infected cells
    • Lam Y.W., et al. Proteomics analysis of the nucleolus in adenovirus-infected cells. Mol. Cell. Proteomics 2010, 9:117-130.
    • (2010) Mol. Cell. Proteomics , vol.9 , pp. 117-130
    • Lam, Y.W.1
  • 62
    • 78649644728 scopus 로고    scopus 로고
    • Quantitative proteomic analysis of A549 cells infected with human respiratory syncytial virus subgroup B using SILAC coupled to LC-MS/MS
    • Munday D.C., et al. Quantitative proteomic analysis of A549 cells infected with human respiratory syncytial virus subgroup B using SILAC coupled to LC-MS/MS. Proteomics 2010, 10:4320-4334.
    • (2010) Proteomics , vol.10 , pp. 4320-4334
    • Munday, D.C.1
  • 63
    • 84864604535 scopus 로고    scopus 로고
    • Response of primary human airway epithelial cells to influenza infection: a quantitative proteomic study
    • Kroeker A.L., et al. Response of primary human airway epithelial cells to influenza infection: a quantitative proteomic study. J. Proteome Res. 2012, 11:4132-4146.
    • (2012) J. Proteome Res. , vol.11 , pp. 4132-4146
    • Kroeker, A.L.1
  • 64
    • 77957355995 scopus 로고    scopus 로고
    • Quantitative proteomics using SILAC coupled to LC-MS/MS reveals changes in the nucleolar proteome in influenza A virus-infected cells
    • Emmott E., et al. Quantitative proteomics using SILAC coupled to LC-MS/MS reveals changes in the nucleolar proteome in influenza A virus-infected cells. J. Proteome Res. 2010, 9:5335-5345.
    • (2010) J. Proteome Res. , vol.9 , pp. 5335-5345
    • Emmott, E.1
  • 65
    • 78149481208 scopus 로고    scopus 로고
    • Reverse-phase phosphoproteome analysis of signaling pathways induced by Rift valley fever virus in human small airway epithelial cells
    • Popova T.G., et al. Reverse-phase phosphoproteome analysis of signaling pathways induced by Rift valley fever virus in human small airway epithelial cells. PLoS ONE 2010, 5:e13805.
    • (2010) PLoS ONE , vol.5 , pp. e13805
    • Popova, T.G.1
  • 66
    • 84879529935 scopus 로고    scopus 로고
    • Latent protein trees
    • Henao R., et al. Latent protein trees. Ann. Appl. Stat. 2013, 7:691-713.
    • (2013) Ann. Appl. Stat. , vol.7 , pp. 691-713
    • Henao, R.1
  • 67
    • 77952065243 scopus 로고    scopus 로고
    • Metabolic effects of influenza virus infection in cultured animal cells: intra- and extracellular metabolite profiling
    • Ritter J.B., et al. Metabolic effects of influenza virus infection in cultured animal cells: intra- and extracellular metabolite profiling. BMC Syst. Biol. 2010, 4:61.
    • (2010) BMC Syst. Biol. , vol.4 , pp. 61
    • Ritter, J.B.1
  • 68
    • 78049365059 scopus 로고    scopus 로고
    • GC/MS-based metabolomics reveals fatty acid biosynthesis and cholesterol metabolism in cell lines infected with influenza A virus
    • Lin S., et al. GC/MS-based metabolomics reveals fatty acid biosynthesis and cholesterol metabolism in cell lines infected with influenza A virus. Talanta 2010, 83:262-268.
    • (2010) Talanta , vol.83 , pp. 262-268
    • Lin, S.1
  • 69
    • 84879935264 scopus 로고    scopus 로고
    • Lipidomic profiling of influenza infection identifies mediators that induce and resolve inflammation
    • Tam V.C., et al. Lipidomic profiling of influenza infection identifies mediators that induce and resolve inflammation. Cell 2013, 154:213-227.
    • (2013) Cell , vol.154 , pp. 213-227
    • Tam, V.C.1
  • 70
    • 52349083651 scopus 로고    scopus 로고
    • Serum microRNAs are promising novel biomarkers
    • Gilad S., et al. Serum microRNAs are promising novel biomarkers. PLoS ONE 2008, 3:e3148.
    • (2008) PLoS ONE , vol.3 , pp. e3148
    • Gilad, S.1
  • 71
    • 48749122914 scopus 로고    scopus 로고
    • Circulating microRNAs as stable blood-based markers for cancer detection
    • Mitchell P.S., et al. Circulating microRNAs as stable blood-based markers for cancer detection. Proc. Natl. Acad. Sci. U.S.A. 2008, 105:10513-10518.
    • (2008) Proc. Natl. Acad. Sci. U.S.A. , vol.105 , pp. 10513-10518
    • Mitchell, P.S.1
  • 72
    • 0347444723 scopus 로고    scopus 로고
    • MicroRNAs: genomics, biogenesis, mechanism, and function
    • Bartel D.P. MicroRNAs: genomics, biogenesis, mechanism, and function. Cell 2004, 116:281-297.
    • (2004) Cell , vol.116 , pp. 281-297
    • Bartel, D.P.1
  • 73
    • 36049018312 scopus 로고    scopus 로고
    • Discovery of functional elements in 12 Drosophila genomes using evolutionary signatures
    • Stark A., et al. Discovery of functional elements in 12 Drosophila genomes using evolutionary signatures. Nature 2007, 450:219-232.
    • (2007) Nature , vol.450 , pp. 219-232
    • Stark, A.1
  • 74
    • 84874457770 scopus 로고    scopus 로고
    • Genomic responses in mouse models poorly mimic human inflammatory diseases
    • Seok J., et al. Genomic responses in mouse models poorly mimic human inflammatory diseases. Proc. Natl. Acad. Sci. U.S.A. 2013, 110:3507-3512.
    • (2013) Proc. Natl. Acad. Sci. U.S.A. , vol.110 , pp. 3507-3512
    • Seok, J.1
  • 75
    • 84876916682 scopus 로고    scopus 로고
    • Prognostic microRNA/mRNA signature from the integrated analysis of patients with invasive breast cancer
    • Volinia S., Croce C.M. Prognostic microRNA/mRNA signature from the integrated analysis of patients with invasive breast cancer. Proc. Natl. Acad. Sci. U.S.A. 2013, 110:7413-7417.
    • (2013) Proc. Natl. Acad. Sci. U.S.A. , vol.110 , pp. 7413-7417
    • Volinia, S.1    Croce, C.M.2
  • 76
    • 84896958900 scopus 로고    scopus 로고
    • Potential urinary miRNA biomarker candidates for the accurate detection of prostate cancer among benign prostatic hyperplasia patients
    • Haj-Ahmad T.A., et al. Potential urinary miRNA biomarker candidates for the accurate detection of prostate cancer among benign prostatic hyperplasia patients. J. Cancer 2014, 5:182-191.
    • (2014) J. Cancer , vol.5 , pp. 182-191
    • Haj-Ahmad, T.A.1
  • 77
    • 84888135550 scopus 로고    scopus 로고
    • Prognostic and predictive value of a microRNA signature in stage II colon cancer: a microRNA expression analysis
    • Zhang J.X., et al. Prognostic and predictive value of a microRNA signature in stage II colon cancer: a microRNA expression analysis. Lancet Oncol. 2013, 14:1295-1306.
    • (2013) Lancet Oncol. , vol.14 , pp. 1295-1306
    • Zhang, J.X.1
  • 78
    • 84877258007 scopus 로고    scopus 로고
    • Treatment of HCV infection by targeting microRNA
    • Janssen H.L., et al. Treatment of HCV infection by targeting microRNA. N. Engl. J. Med. 2013, 368:1685-1694.
    • (2013) N. Engl. J. Med. , vol.368 , pp. 1685-1694
    • Janssen, H.L.1
  • 79
    • 84898620036 scopus 로고    scopus 로고
    • Interplay between microRNAs and host pathogen recognition receptors (PRRs) signaling pathways in response to viral infection
    • Zhou A., et al. Interplay between microRNAs and host pathogen recognition receptors (PRRs) signaling pathways in response to viral infection. Virus Res. 2014, 184C:1-6.
    • (2014) Virus Res. , vol.184 C , pp. 1-6
    • Zhou, A.1
  • 80
    • 77954549997 scopus 로고    scopus 로고
    • Identification of microRNAs involved in the host response to enterovirus 71 infection by a deep sequencing approach
    • Cui L., et al. Identification of microRNAs involved in the host response to enterovirus 71 infection by a deep sequencing approach. J. Biomed. Biotechnol. 2010, 2010:425939.
    • (2010) J. Biomed. Biotechnol. , vol.2010 , pp. 425939
    • Cui, L.1
  • 81
    • 80555129518 scopus 로고    scopus 로고
    • Serum microRNA expression profile distinguishes enterovirus 71 and coxsackievirus 16 infections in patients with hand-foot-and-mouth disease
    • Cui L., et al. Serum microRNA expression profile distinguishes enterovirus 71 and coxsackievirus 16 infections in patients with hand-foot-and-mouth disease. PLoS ONE 2011, 6:e27071.
    • (2011) PLoS ONE , vol.6 , pp. e27071
    • Cui, L.1
  • 82
    • 84866065844 scopus 로고    scopus 로고
    • Influenza A virus infection of human respiratory cells induces primary microRNA expression
    • Buggele W.A., et al. Influenza A virus infection of human respiratory cells induces primary microRNA expression. J. Biol. Chem. 2012, 287:31027-31040.
    • (2012) J. Biol. Chem. , vol.287 , pp. 31027-31040
    • Buggele, W.A.1
  • 83
    • 84878376543 scopus 로고    scopus 로고
    • Microarray analysis of microRNA expression in peripheral blood mononuclear cells of critically ill patients with influenza A (H1N1)
    • Song H., et al. Microarray analysis of microRNA expression in peripheral blood mononuclear cells of critically ill patients with influenza A (H1N1). BMC Infect. Dis. 2013, 13:257.
    • (2013) BMC Infect. Dis. , vol.13 , pp. 257
    • Song, H.1
  • 84
    • 84897541185 scopus 로고    scopus 로고
    • Comprehensive characterization of serum microRNA profile in response to the emerging avian influenza A (H7N9) virus infection in humans
    • Zhu Z., et al. Comprehensive characterization of serum microRNA profile in response to the emerging avian influenza A (H7N9) virus infection in humans. Viruses 2014, 6:1525-1539.
    • (2014) Viruses , vol.6 , pp. 1525-1539
    • Zhu, Z.1
  • 85
    • 84885045857 scopus 로고    scopus 로고
    • MicroRNAs in circulation are altered in response to influenza A virus infection in humans
    • Tambyah P.A., et al. microRNAs in circulation are altered in response to influenza A virus infection in humans. PLoS ONE 2013, 8:e76811.
    • (2013) PLoS ONE , vol.8 , pp. e76811
    • Tambyah, P.A.1
  • 86
    • 84899587267 scopus 로고    scopus 로고
    • Levels of circulating miR-133a are elevated in sepsis and predict mortality in critically ill patients
    • Tacke F., et al. Levels of circulating miR-133a are elevated in sepsis and predict mortality in critically ill patients. Crit. Care Med. 2014, 42:1096-1104.
    • (2014) Crit. Care Med. , vol.42 , pp. 1096-1104
    • Tacke, F.1
  • 87
    • 84891602274 scopus 로고    scopus 로고
    • Characterization and identification of novel serum microRNAs in sepsis patients with different outcomes
    • Wang H.J., et al. Characterization and identification of novel serum microRNAs in sepsis patients with different outcomes. Shock 2013, 39:480-487.
    • (2013) Shock , vol.39 , pp. 480-487
    • Wang, H.J.1
  • 88
    • 84872769969 scopus 로고    scopus 로고
    • Circulating microRNA-150 serum levels predict survival in patients with critical illness and sepsis
    • Roderburg C., et al. Circulating microRNA-150 serum levels predict survival in patients with critical illness and sepsis. PLoS ONE 2013, 8:e54612.
    • (2013) PLoS ONE , vol.8 , pp. e54612
    • Roderburg, C.1
  • 89
    • 84885790547 scopus 로고    scopus 로고
    • Genome-wide sequencing of cellular microRNAs identifies a combinatorial expression signature diagnostic of sepsis
    • Ma Y., et al. Genome-wide sequencing of cellular microRNAs identifies a combinatorial expression signature diagnostic of sepsis. PLoS ONE 2013, 8:e75918.
    • (2013) PLoS ONE , vol.8 , pp. e75918
    • Ma, Y.1
  • 90
    • 84867749638 scopus 로고    scopus 로고
    • Evidence for serum miR-15a and miR-16 levels as biomarkers that distinguish sepsis from systemic inflammatory response syndrome in human subjects
    • Wang H., et al. Evidence for serum miR-15a and miR-16 levels as biomarkers that distinguish sepsis from systemic inflammatory response syndrome in human subjects. Clin. Chem. Lab. Med. 2012, 50:1423-1428.
    • (2012) Clin. Chem. Lab. Med. , vol.50 , pp. 1423-1428
    • Wang, H.1
  • 91
    • 84862491062 scopus 로고    scopus 로고
    • Serum microRNA signatures identified by Solexa sequencing predict sepsis patients' mortality: a prospective observational study
    • Wang H., et al. Serum microRNA signatures identified by Solexa sequencing predict sepsis patients' mortality: a prospective observational study. PLoS ONE 2012, 7:e38885.
    • (2012) PLoS ONE , vol.7 , pp. e38885
    • Wang, H.1
  • 92
    • 84878344930 scopus 로고    scopus 로고
    • Serum microRNA expression profile as a biomarker for the diagnosis of pertussis
    • Ge Y., et al. Serum microRNA expression profile as a biomarker for the diagnosis of pertussis. Mol. Biol. Rep. 2013, 40:1325-1332.
    • (2013) Mol. Biol. Rep. , vol.40 , pp. 1325-1332
    • Ge, Y.1
  • 93
    • 84864986016 scopus 로고    scopus 로고
    • Altered microRNA signatures in sputum of patients with active pulmonary tuberculosis
    • Yi Z., et al. Altered microRNA signatures in sputum of patients with active pulmonary tuberculosis. PLoS ONE 2012, 7:e43184.
    • (2012) PLoS ONE , vol.7 , pp. e43184
    • Yi, Z.1
  • 94
    • 84876191502 scopus 로고    scopus 로고
    • Decreased expression of miR-21, miR-26a, miR-29a, and miR-142-3p in CD4(+) T cells and peripheral blood from tuberculosis patients
    • Kleinsteuber K., et al. Decreased expression of miR-21, miR-26a, miR-29a, and miR-142-3p in CD4(+) T cells and peripheral blood from tuberculosis patients. PLoS ONE 2013, 8:e61609.
    • (2013) PLoS ONE , vol.8 , pp. e61609
    • Kleinsteuber, K.1
  • 95
    • 84894258313 scopus 로고    scopus 로고
    • MiRNA signatures in Sera of patients with active pulmonary tuberculosis
    • Miotto P., et al. miRNA signatures in Sera of patients with active pulmonary tuberculosis. PLoS ONE 2013, 8:e80149.
    • (2013) PLoS ONE , vol.8 , pp. e80149
    • Miotto, P.1
  • 96
    • 84873491225 scopus 로고    scopus 로고
    • Altered serum microRNAs as biomarkers for the early diagnosis of pulmonary tuberculosis infection
    • Qi Y., et al. Altered serum microRNAs as biomarkers for the early diagnosis of pulmonary tuberculosis infection. BMC Infect. Dis. 2012, 12:384.
    • (2012) BMC Infect. Dis. , vol.12 , pp. 384
    • Qi, Y.1
  • 97
    • 84889672787 scopus 로고    scopus 로고
    • Transcriptional profiling in infectious diseases: ready for prime time?
    • Mejias A., Ramilo O. Transcriptional profiling in infectious diseases: ready for prime time?. J. Infect. 2014, 68(Suppl. 1):S94-S99.
    • (2014) J. Infect. , vol.68 , pp. S94-S99
    • Mejias, A.1    Ramilo, O.2
  • 98
    • 84896345445 scopus 로고    scopus 로고
    • Molecular signatures of antibody responses derived from a systems biology study of five human vaccines
    • Li S., et al. Molecular signatures of antibody responses derived from a systems biology study of five human vaccines. Nat. Immunol. 2014, 15:195-204.
    • (2014) Nat. Immunol. , vol.15 , pp. 195-204
    • Li, S.1
  • 99
    • 84880969980 scopus 로고    scopus 로고
    • A handheld point-of-care genomic diagnostic system
    • Myers F.B., et al. A handheld point-of-care genomic diagnostic system. PLoS ONE 2013, 8:e70266.
    • (2013) PLoS ONE , vol.8 , pp. e70266
    • Myers, F.B.1
  • 100
    • 79955100916 scopus 로고    scopus 로고
    • A systems biology approach to infectious disease research: innovating the pathogen-host research paradigm
    • Aderem A., et al. A systems biology approach to infectious disease research: innovating the pathogen-host research paradigm. MBio 2011, 2:e00325-e410.
    • (2011) MBio , vol.2 , pp. e00325-e410
    • Aderem, A.1
  • 101
    • 33749514992 scopus 로고    scopus 로고
    • Genomic analysis of increased host immune and cell death responses induced by 1918 influenza virus
    • Kash J.C., et al. Genomic analysis of increased host immune and cell death responses induced by 1918 influenza virus. Nature 2006, 443:578-581.
    • (2006) Nature , vol.443 , pp. 578-581
    • Kash, J.C.1
  • 102
    • 33846265834 scopus 로고    scopus 로고
    • Aberrant innate immune response in lethal infection of macaques with the 1918 influenza virus
    • Kobasa D., et al. Aberrant innate immune response in lethal infection of macaques with the 1918 influenza virus. Nature 2007, 445:319-323.
    • (2007) Nature , vol.445 , pp. 319-323
    • Kobasa, D.1
  • 103
    • 77954464012 scopus 로고    scopus 로고
    • Lethal dissemination of H5N1 influenza virus is associated with dysregulation of inflammation and lipoxin signaling in a mouse model of infection
    • Cilloniz C., et al. Lethal dissemination of H5N1 influenza virus is associated with dysregulation of inflammation and lipoxin signaling in a mouse model of infection. J. Virol. 2010, 84:7613-7624.
    • (2010) J. Virol. , vol.84 , pp. 7613-7624
    • Cilloniz, C.1
  • 104
    • 73349087853 scopus 로고    scopus 로고
    • Lethal influenza virus infection in macaques is associated with early dysregulation of inflammatory related genes
    • Cilloniz C., et al. Lethal influenza virus infection in macaques is associated with early dysregulation of inflammatory related genes. PLoS Pathog. 2009, 5:e1000604.
    • (2009) PLoS Pathog. , vol.5 , pp. e1000604
    • Cilloniz, C.1
  • 105
    • 33750362127 scopus 로고    scopus 로고
    • Integrated molecular signature of disease: analysis of influenza virus-infected macaques through functional genomics and proteomics
    • Baas T., et al. Integrated molecular signature of disease: analysis of influenza virus-infected macaques through functional genomics and proteomics. J. Virol. 2006, 80:10813-10828.
    • (2006) J. Virol. , vol.80 , pp. 10813-10828
    • Baas, T.1
  • 106
    • 40349084265 scopus 로고    scopus 로고
    • Gene expression in lung and basal forebrain during influenza infection in mice
    • Ding M., et al. Gene expression in lung and basal forebrain during influenza infection in mice. Genes Brain Behav. 2008, 7:173-183.
    • (2008) Genes Brain Behav. , vol.7 , pp. 173-183
    • Ding, M.1
  • 107
    • 80455158415 scopus 로고    scopus 로고
    • Lethal synergism of 2009 pandemic H1N1 influenza virus and Streptococcus pneumoniae coinfection is associated with loss of murine lung repair responses
    • e00172-11
    • Kash J.C., et al. Lethal synergism of 2009 pandemic H1N1 influenza virus and Streptococcus pneumoniae coinfection is associated with loss of murine lung repair responses. MBio 2011, 2. e00172-11.
    • (2011) MBio , vol.2
    • Kash, J.C.1
  • 108
    • 77955894773 scopus 로고    scopus 로고
    • An interferon-inducible neutrophil-driven blood transcriptional signature in human tuberculosis
    • Berry M.P., et al. An interferon-inducible neutrophil-driven blood transcriptional signature in human tuberculosis. Nature 2010, 466:973-977.
    • (2010) Nature , vol.466 , pp. 973-977
    • Berry, M.P.1
  • 109
    • 84886613855 scopus 로고    scopus 로고
    • Detection of tuberculosis in HIV-infected and -uninfected African adults using whole blood RNA expression signatures: a case-control study
    • Kaforou M., et al. Detection of tuberculosis in HIV-infected and -uninfected African adults using whole blood RNA expression signatures: a case-control study. PLoS Med. 2013, 10:e1001538.
    • (2013) PLoS Med. , vol.10 , pp. e1001538
    • Kaforou, M.1
  • 110
    • 84899709556 scopus 로고    scopus 로고
    • Diagnosis of childhood tuberculosis and host RNA expression in Africa
    • Anderson S.T., et al. Diagnosis of childhood tuberculosis and host RNA expression in Africa. N. Engl. J. Med. 2014, 370:1712-1723.
    • (2014) N. Engl. J. Med. , vol.370 , pp. 1712-1723
    • Anderson, S.T.1


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