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Volumn 24, Issue 8, 2014, Pages 1316-1333

Population genomics of parallel hybrid zones in the mimetic butterflies, H. melpomene and H. erato

Author keywords

[No Author keywords available]

Indexed keywords

ALTITUDE; ARTICLE; BUTTERFLY; DNA SEQUENCE; ECUADOR; EVOLUTIONARY ADAPTATION; GENE MAPPING; GENETIC VARIABILITY; GENOMICS; GENOTYPE; HELICONIUS ERATO; HELICONIUS MELPOMENE; HIGH THROUGHPUT SEQUENCING; HYBRID ZONE; INSECT GENOME; NONHUMAN; NUCLEOTIDE SEQUENCE; PERU; PHENOTYPE; PHENOTYPIC VARIATION; PHYLOGENY; POPULATION GENETICS; POPULATION STRUCTURE; PRIORITY JOURNAL; QUANTITATIVE TRAIT LOCUS; SINGLE NUCLEOTIDE POLYMORPHISM; ANATOMY AND HISTOLOGY; ANIMAL; CHROMOSOMAL MAPPING; GENE LOCUS; GENETIC VARIATION; GENETICS; MOLECULAR EVOLUTION; PIGMENTATION; SPECIES DIFFERENTIATION; WING;

EID: 84905666210     PISSN: 10889051     EISSN: 15495469     Source Type: Journal    
DOI: 10.1101/gr.169292.113     Document Type: Article
Times cited : (94)

References (80)
  • 2
    • 34447324105 scopus 로고    scopus 로고
    • GenABEL: An R library for genome-wide association analysis
    • DOI 10.1093/bioinformatics/btm108
    • Aulchenko YS, Ripke S, Isaacs A, van Duijn CM. 2007. GenABEL: an R library for genome-wide association analysis. Bioinformatics 23: 1294-1296. (Pubitemid 47050548)
    • (2007) Bioinformatics , vol.23 , Issue.10 , pp. 1294-1296
    • Aulchenko, Y.S.1    Ripke, S.2    Isaacs, A.3    Van Duijn, C.M.4
  • 3
    • 2342657884 scopus 로고    scopus 로고
    • Decoding cilia function: Defining specialized genes required for compartmentalized cilia biogenesis
    • DOI 10.1016/S0092-8674(04)00412-X, PII S009286740400412X
    • Avidor-Reiss T, Maer AM, Koundakjian E, Polyanovsky A, Keil T, Subramaniam S, Zuker CS. 2004. Decoding cilia function: defining specialized genes required for compartmentalized cilia biogenesis. Cell 117: 527-539. (Pubitemid 38610237)
    • (2004) Cell , vol.117 , Issue.4 , pp. 527-539
    • Avidor-Reiss, T.1    Maer, A.M.2    Koundakjian, E.3    Polyanovsky, A.4    Keil, T.5    Subramaniam, S.6    Zuker, C.S.7
  • 7
    • 57749182380 scopus 로고    scopus 로고
    • Butterfly speciation and the distribution of gene effect sizes fixed during adaptation
    • Baxter SW, Johnston SE, Jiggins CD. 2009. Butterfly speciation and the distribution of gene effect sizes fixed during adaptation. Heredity (Edinb) 102: 57-65.
    • (2009) Heredity (Edinb) , vol.102 , pp. 57-65
    • Baxter, S.W.1    Johnston, S.E.2    Jiggins, C.D.3
  • 10
    • 0000169687 scopus 로고    scopus 로고
    • QTL analyses: Power, precision, and accuracy
    • ed. Paterson AH, CRC Press, Boca Raton, FL
    • Beavis WD. 1997. QTL analyses: power, precision, and accuracy. In Molecular dissection of complex traits (ed. Paterson AH), pp. 145-162. CRC Press, Boca Raton, FL.
    • (1997) Molecular Dissection of Complex Traits , pp. 145-162
    • Beavis, W.D.1
  • 11
    • 0000300114 scopus 로고
    • Natural selection for Miillerian mimicry in Heliconius erato in Costa Rica
    • Benson WW. 1972. Natural selection for Miillerian mimicry in Heliconius erato in Costa Rica. Science 176: 936-939.
    • (1972) Science , vol.176 , pp. 936-939
    • Benson, W.W.1
  • 12
    • 0011279307 scopus 로고
    • Alternative models for infrageneric diversification in the humid tropics: Tests with passion vine butterflies
    • ed. Prance GT, Columbia University Press, New York
    • Benson WW. 1982. Alternative models for infrageneric diversification in the humid tropics: tests with passion vine butterflies. In Biological Diversification in the Tropics (ed. Prance GT), pp. 608-640. Columbia University Press, New York.
    • (1982) Biological Diversification in the Tropics , pp. 608-640
    • Benson, W.W.1
  • 13
    • 79955577378 scopus 로고    scopus 로고
    • The coupling hypothesis: Why genome scans may fail to map local adaptation genes
    • Bierne N, Welch J, Loire E, Bonhomme F, David P. 2011. The coupling hypothesis: why genome scans may fail to map local adaptation genes. Mol Ecol 20: 2044-2072.
    • (2011) Mol Ecol , vol.20 , pp. 2044-2072
    • Bierne, N.1    Welch, J.2    Loire, E.3    Bonhomme, F.4    David, P.5
  • 15
    • 0029749096 scopus 로고    scopus 로고
    • Parallel race formation and the evolution of mimicry in Heliconius butterflies: A phylogenetic hypothesis from mitochondrial DNA sequences
    • Brower AV. 1996. Parallel race formation and the evolution of mimicry in Heliconius butterflies: a phylogenetic hypothesis from mitochondrial DNA sequences. Evolution 50: 195-221. (Pubitemid 126517935)
    • (1996) Evolution , vol.50 , Issue.1 , pp. 195-221
    • Brower, A.V.Z.1
  • 17
    • 0031450133 scopus 로고    scopus 로고
    • The effects of local selection, balanced polymorphism and background selection on equilibrium patterns of genetic diversity in subdivided populations
    • DOI 10.1017/S0016672397002954
    • Charlesworth B, Nordborg M, Charlesworth D. 1997. The effects of local selection, balanced polymorphism and background selection on equilibrium patterns of genetic diversity in subdivided populations. Genet Res 70: 155-174. (Pubitemid 28021578)
    • (1997) Genetical Research , vol.70 , Issue.2 , pp. 155-174
    • Charlesworth, B.1    Nordborg, M.2    Charlesworth, D.3
  • 19
    • 84890110647 scopus 로고    scopus 로고
    • Detecting adaptive trait loci in non-model systems: Divergence or admixture mapping?
    • Crawford JE, Nielsen R. 2013. Detecting adaptive trait loci in non-model systems: divergence or admixture mapping? Mol Ecol 22: 6131-6148.
    • (2013) Mol Ecol , vol.22 , pp. 6131-6148
    • Crawford, J.E.1    Nielsen, R.2
  • 20
    • 84860628141 scopus 로고    scopus 로고
    • Phylogenetic codivergence supports coevolution of mimetic Heliconius butterflies
    • Cuthill JH, Charleston M. 2012. Phylogenetic codivergence supports coevolution of mimetic Heliconius butterflies. PLoS ONE 7: e36464.
    • (2012) PLoS ONE , vol.7
    • Cuthill, J.H.1    Charleston, M.2
  • 25
    • 58149347836 scopus 로고    scopus 로고
    • A genome-scan method to identify selected loci appropriate for both dominant and codominant markers: A Bayesian perspective
    • Foll M, Gaggiotti O. 2008. A genome-scan method to identify selected loci appropriate for both dominant and codominant markers: a Bayesian perspective. Genetics 180: 977-993.
    • (2008) Genetics , vol.180 , pp. 977-993
    • Foll, M.1    Gaggiotti, O.2
  • 27
    • 79953184676 scopus 로고    scopus 로고
    • A hierarchical Bayesian model for next-generation population genomics
    • Gompert Z, Buerkle CA. 2011. A hierarchical Bayesian model for next-generation population genomics. Genetics 187: 903-917.
    • (2011) Genetics , vol.187 , pp. 903-917
    • Gompert, Z.1    Buerkle, C.A.2
  • 28
    • 84863512164 scopus 로고    scopus 로고
    • Genomic regions with a history of divergent selection affect fitness of hybrids between two butterfly species
    • Gompert Z, Lucas LK, Nice CC, Fordyce JA, Forister ML, Buerkle AC. 2012. Genomic regions with a history of divergent selection affect fitness of hybrids between two butterfly species. Evolution 66: 2167-2181.
    • (2012) Evolution , vol.66 , pp. 2167-2181
    • Gompert, Z.1    Lucas, L.K.2    Nice, C.C.3    Fordyce, J.A.4    Forister, M.L.5    Buerkle, A.C.6
  • 29
    • 0242578620 scopus 로고    scopus 로고
    • A Simple, Fast, and Accurate Algorithm to Estimate Large Phylogenies by Maximum Likelihood
    • DOI 10.1080/10635150390235520
    • Guindon S, Gascuel O. 2003. A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Syst Biol 52: 696-704. (Pubitemid 37365050)
    • (2003) Systematic Biology , vol.52 , Issue.5 , pp. 696-704
    • Guindon, S.1    Gascuel, O.2
  • 31
    • 84863496231 scopus 로고    scopus 로고
    • Butterfly genome reveals promiscuous exchange of mimicry adaptations among species
    • The Heliconius Genome Consortium
    • The Heliconius Genome Consortium. 2012. Butterfly genome reveals promiscuous exchange of mimicry adaptations among species. Nature 487: 94-98.
    • (2012) Nature , vol.487 , pp. 94-98
  • 33
    • 45849136368 scopus 로고    scopus 로고
    • Ecological speciation inmimetic butterflies
    • Jiggins CD. 2008. Ecological speciation inmimetic butterflies. Bioscience 58: 541-548.
    • (2008) Bioscience , vol.58 , pp. 541-548
    • Jiggins, C.D.1
  • 35
    • 0035905778 scopus 로고    scopus 로고
    • Three-butterfly system provides a field test of müllerian mimicry
    • DOI 10.1038/35053066
    • Kapan DD. 2001. Three-butterfly system provides a field test of müllerian mimicry. Nature 409: 338-340. (Pubitemid 32151237)
    • (2001) Nature , vol.409 , Issue.6818 , pp. 338-340
    • Kapan, D.D.1
  • 36
    • 84905654911 scopus 로고    scopus 로고
    • Hybrid zones
    • John Wiley, New York
    • Kawakami T, Butlin RK. 2001. Hybrid zones. In eLS. John Wiley, New York. http://onlinelibrary.wiley.com/doi/10.1002/9780470015902.a0001752.pub2/abstract.
    • (2001) ELS
    • Kawakami, T.1    Butlin, R.K.2
  • 37
    • 84878452722 scopus 로고    scopus 로고
    • Population genomic signatures of divergent adaptation, gene flow and hybrid speciation in the rapid radiation of Lake Victoria cichlid fishes
    • Keller I, Wagner CE, Greuter L, Mwaiko S, Selz OM, Sivasundar A, Wittwer S, Seehausen O. 2013. Population genomic signatures of divergent adaptation, gene flow and hybrid speciation in the rapid radiation of Lake Victoria cichlid fishes. Mol Ecol 22: 2848-2863.
    • (2013) Mol Ecol , vol.22 , pp. 2848-2863
    • Keller, I.1    Wagner, C.E.2    Greuter, L.3    Mwaiko, S.4    Selz, O.M.5    Sivasundar, A.6    Wittwer, S.7    Seehausen, O.8
  • 38
    • 0022841747 scopus 로고
    • Further genetic analyses of a hybrid zone between leopard frogs (Rana pipiens complex) in Central Texas
    • Kocher TD, Sage RD. 1986. Further genetic analyses of a hybrid zone between leopard frogs (Rana pipiens complex) in Central Texas. Evolution 40: 21-33.
    • (1986) Evolution , vol.40 , pp. 21-33
    • Kocher, T.D.1    Sage, R.D.2
  • 40
    • 33749971811 scopus 로고    scopus 로고
    • Comentarios taxonomicos y nomenclaturales sobre Heliconiini Neotropicales, con designacion de lectotipos y descripcion de cuatro subespecies nuevas (Lepidoptera: Nymphalidae: Heliconiinae)
    • Lamas G. 1997. Comentarios taxonomicos y nomenclaturales sobre Heliconiini Neotropicales, con designacion de lectotipos y descripcion de cuatro subespecies nuevas (Lepidoptera: Nymphalidae: Heliconiinae). Rev Per Ent 40: 111-125.
    • (1997) Rev Per Ent , vol.40 , pp. 111-125
    • Lamas, G.1
  • 41
    • 11444261962 scopus 로고    scopus 로고
    • Specialized avian predators repeatedly attack novel color morphs of Heliconius butterflies
    • Langham GM. 2004. Specialized avian predators repeatedly attack novel color morphs of Heliconius butterflies. Evolution 58: 2783-2787. (Pubitemid 40078423)
    • (2004) Evolution , vol.58 , Issue.12 , pp. 2783-2787
    • Langham, G.M.1
  • 42
    • 33846643453 scopus 로고    scopus 로고
    • Admixture in European Populus hybrid zones makes feasible the mapping of loci that contribute to reproductive isolation and trait differences
    • DOI 10.1038/sj.hdy.6800898, PII 6800898
    • Lexer C, Buerkle CA, Joseph JA, Heinze B, Fay MF. 2006. Admixture in European Populus hybrid zones makes feasible the mapping of loci that contribute to reproductive isolation and trait differences. Heredity 98: 74-84. (Pubitemid 46173896)
    • (2007) Heredity , vol.98 , Issue.2 , pp. 74-84
    • Lexer, C.1    Buerkle, C.A.2    Joseph, J.A.3    Heinze, B.4    Fay, M.F.5
  • 43
    • 79956307251 scopus 로고    scopus 로고
    • Stampy: A statistical algorithm for sensitive and fast mapping of Illumina sequence reads
    • Lunter G, Goodson M. 2011. Stampy: a statistical algorithm for sensitive and fast mapping of Illumina sequence reads. Genome Res 21: 936-939.
    • (2011) Genome Res , vol.21 , pp. 936-939
    • Lunter, G.1    Goodson, M.2
  • 44
    • 0000245974 scopus 로고
    • The genetics of warning colour in Peruvian hybrid zones of Heliconius erato and H. Melpomene
    • Mallet J. 1989. The genetics of warning colour in Peruvian hybrid zones of Heliconius erato and H. melpomene. Proc R Soc Lond B Biol Sci 236: 163-185.
    • (1989) Proc R Soc Lond B Biol Sci , vol.236 , pp. 163-185
    • Mallet, J.1
  • 45
    • 0033278318 scopus 로고    scopus 로고
    • Causes and consequences of a lack of coevolution in Müllerian mimicry
    • DOI 10.1023/A:1011060330515
    • Mallet J. 1999. Causes and consequences of a lack of coevolution in Müllerian mimicry. Evol Ecol 13: 777-806. (Pubitemid 32382716)
    • (1999) Evolutionary Ecology , vol.13 , Issue.7-8 , pp. 777-806
    • Mallet, J.1
  • 46
    • 74549220383 scopus 로고    scopus 로고
    • Shift happens! Shifting balance and the evolution of diversity in warning colour and mimicry
    • Mallet J. 2010. Shift happens! Shifting balance and the evolution of diversity in warning colour and mimicry. Ecol Entomol 35: 90-104.
    • (2010) Ecol Entomol , vol.35 , pp. 90-104
    • Mallet, J.1
  • 47
    • 0024903647 scopus 로고
    • Strong natural selection in a warning-color hybrid zone
    • Mallet J, Barton N. 1989a. Strong natural selection in a warning-color hybrid zone. Evolution 43: 421-431. (Pubitemid 20417673)
    • (1989) Evolution , vol.43 , Issue.2 , pp. 421-431
    • Mallet, J.1    Barton, N.H.2
  • 48
    • 0024713508 scopus 로고
    • Inference from clines stabilized by frequency-dependent selection
    • Mallet J, Barton N. 1989b. Inference from clines stabilized by frequency-dependent selection. Genetics 122: 967-976.
    • (1989) Genetics , vol.122 , pp. 967-976
    • Mallet, J.1    Barton, N.2
  • 49
    • 0025233659 scopus 로고
    • Estimates of selection and gene flow from measures of cline width and linkage disequilibrium in heliconius hybrid zones
    • Mallet J, Barton N, Lamas G, Santisteban J, Muedas M, Eeley H. 1990. Estimates of selection and gene flow from measures of cline width and linkage disequilibrium in Heliconius hybrid zones. Genetics 124: 921-936. (Pubitemid 20146069)
    • (1990) Genetics , vol.124 , Issue.4 , pp. 921-936
    • Mallet, J.1    Barton, N.2    Gerardo, L.M.3    Jose, S.C.4    Manuel, M.M.5    Eeley, H.6
  • 52
    • 84880333880 scopus 로고    scopus 로고
    • Genetic differentiation without mimicry shift in a pair of hybridizing Heliconius species (Lepidoptera: Nymphalidae)
    • Mérot C, Mavárez J, Evin A, Dasmahapatra KK, Mallet J, Lamas G, Joron M. 2013. Genetic differentiation without mimicry shift in a pair of hybridizing Heliconius species (Lepidoptera: Nymphalidae). Biol J Linn Soc Lond 109: 830-847.
    • (2013) Biol J Linn Soc Lond , vol.109 , pp. 830-847
    • Mérot, C.1    Mavárez, J.2    Evin, A.3    Dasmahapatra, K.K.4    Mallet, J.5    Lamas, G.6    Joron, M.7
  • 54
    • 79551620909 scopus 로고    scopus 로고
    • Pervasive genetic associations between traits causing reproductive isolation in Heliconius butterflies
    • Merrill RM, Van Schooten B, Scott JA, Jiggins CD. 2011b. Pervasive genetic associations between traits causing reproductive isolation in Heliconius butterflies. Proc Biol Sci 278: 511-518.
    • (2011) Proc Biol Sci , vol.278 , pp. 511-518
    • Merrill, R.M.1    Van Schooten, B.2    Scott, J.A.3    Jiggins, C.D.4
  • 55
    • 0002399286 scopus 로고
    • Ituna and Thyridia; a remarkable case of mimicry in butterflies
    • Müller F. 1879. Ituna and Thyridia; a remarkable case of mimicry in butterflies. Trans Entomol Soc Lond 1879: xx-xxix.
    • (1879) Trans Entomol Soc Lond , vol.1879
    • Müller, F.1
  • 56
    • 77957881267 scopus 로고    scopus 로고
    • A golden age for evolutionary genetics? Genomic studies of adaptation in natural populations
    • Nadeau NJ, Jiggins CD. 2010. A golden age for evolutionary genetics? Genomic studies of adaptation in natural populations. Trends Genet 26: 484-492.
    • (2010) Trends Genet , vol.26 , pp. 484-492
    • Nadeau, N.J.1    Jiggins, C.D.2
  • 59
    • 13144257707 scopus 로고    scopus 로고
    • The genetic theory of adaptation: A brief history
    • DOI 10.1038/nrg1523
    • Orr HA. 2005. The genetic theory of adaptation: a brief history. Nat Rev Genet 6: 119-127. (Pubitemid 40179534)
    • (2005) Nature Reviews Genetics , vol.6 , Issue.2 , pp. 119-127
    • Orr, H.A.1
  • 60
    • 58549083551 scopus 로고    scopus 로고
    • Genomic hotspots of adaptation in butterfly wing pattern evolution
    • Papa R, Martin A, Reed RD. 2008a. Genomic hotspots of adaptation in butterfly wing pattern evolution. Curr Opin Genet Dev 18: 559-564.
    • (2008) Curr Opin Genet Dev , vol.18 , pp. 559-564
    • Papa, R.1    Martin, A.2    Reed, R.D.3
  • 64
    • 33746512512 scopus 로고    scopus 로고
    • Principal components analysis corrects for stratification in genome-wide association studies
    • DOI 10.1038/ng1847, PII NG1847
    • Price AL, Patterson NJ, Plenge RM, Weinblatt ME, Shadick NA, Reich D. 2006. Principal components analysis corrects for stratification in genome-wide association studies. Nat Genet 38: 904-909. (Pubitemid 44141658)
    • (2006) Nature Genetics , vol.38 , Issue.8 , pp. 904-909
    • Price, A.L.1    Patterson, N.J.2    Plenge, R.M.3    Weinblatt, M.E.4    Shadick, N.A.5    Reich, D.6
  • 65
    • 0034118493 scopus 로고    scopus 로고
    • Inference of population structure using multilocus genotype data
    • Pritchard JK, Stephens M, Donnelly P. 2000. Inference of population structure using multilocus genotype data. Genetics 155: 945-959. (Pubitemid 30397141)
    • (2000) Genetics , vol.155 , Issue.2 , pp. 945-959
    • Pritchard, J.K.1    Stephens, M.2    Donnelly, P.3
  • 67
    • 84863304598 scopus 로고    scopus 로고
    • R Development Core Team. R Foundation for Statistical Computing, Vienna, Austria
    • R Development Core Team. 2011. R: A Language and Environment for Statistical Computing (version 2.14). R Foundation for Statistical Computing, Vienna, Austria. http://www.R-project.org/.
    • (2011) R: A Language and Environment for Statistical Computing (Version 2.14)
  • 70
    • 84856495145 scopus 로고    scopus 로고
    • Testing historical explanations for gradients in species richness in heliconiine butterflies of tropical America
    • Rosser N, Phillimore AB, Huertas B, Willmott KR, Mallet J. 2012. Testing historical explanations for gradients in species richness in heliconiine butterflies of tropical America. Biol J Linn Soc Lond 105: 479-497.
    • (2012) Biol J Linn Soc Lond , vol.105 , pp. 479-497
    • Rosser, N.1    Phillimore, A.B.2    Huertas, B.3    Willmott, K.R.4    Mallet, J.5
  • 73
    • 0023666025 scopus 로고
    • Adaptive evolution in the stomach lysozymes of foregut fermenters
    • Stewart CB, Schilling JW, Wilson AC. 1987. Adaptive evolution in the stomach lysozymes of foregut fermenters. Nature 330: 401-404.
    • (1987) Nature , vol.330 , pp. 401-404
    • Stewart, C.B.1    Schilling, J.W.2    Wilson, A.C.3
  • 74
    • 38549103015 scopus 로고    scopus 로고
    • Combining population genomics and quantitative genetics: Finding the genes underlying ecologically important traits
    • DOI 10.1038/sj.hdy.6800937, PII 6800937
    • Stinchcombe JR, Hoekstra HE. 2007. Combining population genomics and quantitative genetics: finding the genes underlying ecologically important traits. Heredity 100: 158-170. (Pubitemid 351156869)
    • (2008) Heredity , vol.100 , Issue.2 , pp. 158-170
    • Stinchcombe, J.R.1    Hoekstra, H.E.2
  • 78
    • 84255187761 scopus 로고    scopus 로고
    • Divergence hitchhiking and the spread of genomic isolation during ecological speciation-with-gene-flow
    • Via S. 2012. Divergence hitchhiking and the spread of genomic isolation during ecological speciation-with-gene-flow. Philos Trans R Soc Lond B Biol Sci 367: 451-460.
    • (2012) Philos Trans R Soc Lond B Biol Sci , vol.367 , pp. 451-460
    • Via, S.1
  • 80
    • 16344387924 scopus 로고    scopus 로고
    • Parallel genotypic adaptation: When evolution repeats itself
    • DOI 10.1007/s10709-003-2738-9
    • Wood TE, Burke TM, Rieseberg LH. 2005. Parallel genotypic adaptation: when evolution repeats itself. Genetica 123: 157-170. (Pubitemid 40466126)
    • (2005) Genetica , vol.123 , Issue.1-2 , pp. 157-170
    • Wood, T.E.1    Burke, J.M.2    Rieseberg, L.H.3


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