메뉴 건너뛰기




Volumn 9, Issue , 2008, Pages

Highly conserved gene order and numerous novel repetitive elements in genomic regions linked to wing pattern variation in Heliconius butterflies

(13)  Papa, Riccardo a,b,c   Morrison, Clayton M d   Walters, James R e   Counterman, Brian A f   Chen, Rui d   Halder, Georg d,g   Ferguson, Laura h   Chamberlain, Nicola i   Ffrench Constant, Richard j   Kapan, Durrell D k   Jiggins, Chris D h   Reed, Robert D b   McMillan, William O a,f  


Author keywords

[No Author keywords available]

Indexed keywords

BIOLOGICAL MARKER; DNA;

EID: 49249121601     PISSN: None     EISSN: 14712164     Source Type: Journal    
DOI: 10.1186/1471-2164-9-345     Document Type: Article
Times cited : (50)

References (49)
  • 1
    • 0036498486 scopus 로고    scopus 로고
    • Development and evolution on the wing
    • 10.1016/S0169-5347(01)02427-2
    • McMillan WO Monteiro A Kapan DD Development and evolution on the wing Trends Ecol Evol 2002, 17:125-133. 10.1016/S0169-5347(01)02427-2
    • (2002) Trends Ecol Evol , vol.17 , pp. 125-133
    • McMillan, W.O.1    Monteiro, A.2    Kapan, D.D.3
  • 2
    • 33747876621 scopus 로고    scopus 로고
    • Heliconius wing patterns: An evo-devo model for understanding phenotypic diversity
    • 10.1038/sj.hdy.6800873 16835591
    • Joron M Jiggins CD Papanicolaou A McMillan WO Heliconius wing patterns: an evo-devo model for understanding phenotypic diversity Heredity 2006, 97:157-167. 10.1038/sj.hdy.6800873 16835591
    • (2006) Heredity , vol.97 , pp. 157-167
    • Joron, M.1    Jiggins, C.D.2    Papanicolaou, A.3    McMillan, W.O.4
  • 3
    • 0000008194 scopus 로고
    • The biology of Heliconius and related genera
    • 10.1146/annurev.en.26.010181.002235
    • Brown KS The biology of Heliconius and related genera Annu Rev Entomol 1981, 26:427-456. 10.1146/annurev.en.26.010181.002235
    • (1981) Annu Rev Entomol , vol.26 , pp. 427-456
    • Brown, K.S.1
  • 4
    • 0035902113 scopus 로고    scopus 로고
    • Reproductive isolation caused by colour pattern mimicry
    • 10.1038/35077075 11357131
    • Jiggins CD Naisbit RE Coe RL Mallet J Reproductive isolation caused by colour pattern mimicry Nature 2001, 411:302-305. 10.1038/35077075 11357131
    • (2001) Nature , vol.411 , pp. 302-305
    • Jiggins, C.D.1    Naisbit, R.E.2    Coe, R.L.3    Mallet, J.4
  • 6
    • 0028450671 scopus 로고
    • Phylogeny of Heliconius butterflies inferred from mitochondrial DNA sequences (Lepidoptera: Nymphalidae)
    • 10.1006/mpev.1994.1018 8075834
    • Brower AVZ Phylogeny of Heliconius butterflies inferred from mitochondrial DNA sequences (Lepidoptera: Nymphalidae) Mol Phylogenet Evol 1994, 3:159-174. 10.1006/mpev.1994.1018 8075834
    • (1994) Mol Phylogenet Evol , vol.3 , pp. 159-174
    • Brower, A.V.Z.1
  • 7
    • 34548740770 scopus 로고    scopus 로고
    • Do pollen feeding, pupal-mating and larval gregariousness have a single origin in Heliconius butterflies? Inferences from multilocus DNA sequence data
    • 10.1111/j.1095-8312.2007.00830.x
    • Beltrán M Jiggins CD Brower AVZ Bermingham E Mallet J Do pollen feeding, pupal-mating and larval gregariousness have a single origin in Heliconius butterflies? Inferences from multilocus DNA sequence data Biol J Linn Soc Lond 2007, 92:221-239. 10.1111/j.1095-8312.2007.00830.x
    • (2007) Biol J Linn Soc Lond , vol.92 , pp. 221-239
    • Beltrán, M.1    Jiggins, C.D.2    Brower, A.V.Z.3    Bermingham, E.4    Mallet, J.5
  • 8
    • 0030881056 scopus 로고    scopus 로고
    • The genetic basis of an adaptive radiation: Warning colour in two Heliconius species
    • 10.1098/rspb.1997.0161
    • Jiggins CD McMillan WO The genetic basis of an adaptive radiation: warning colour in two Heliconius species Proc R Soc Lond B Biol Sci 1997, 246:1167-1175. 10.1098/rspb.1997.0161
    • (1997) Proc R Soc Lond B Biol Sci , vol.246 , pp. 1167-1175
    • Jiggins, C.D.1    McMillan, W.O.2
  • 10
    • 28044454196 scopus 로고    scopus 로고
    • A genetic linkage map of the mimetic butterfly, Heliconius melpomene
    • 1456771 15489522 10.1534/genetics.104.034686
    • Jiggins CD Mavarez J Beltrán M McMillan WO Johnson S Birmingham E A genetic linkage map of the mimetic butterfly, Heliconius melpomene Genetics 2005, 171:557-570. 1456771 15489522 10.1534/genetics.104.034686
    • (2005) Genetics , vol.171 , pp. 557-570
    • Jiggins, C.D.1    Mavarez, J.2    Beltrán, M.3    McMillan, W.O.4    Johnson, S.5    Birmingham, E.6
  • 11
    • 35048882961 scopus 로고    scopus 로고
    • Synteny and chromosome evolution in the lepidoptera: Evidence from mapping in Heliconius melpomene
    • 2013725 17603110 10.1534/genetics.107.073122
    • Pringle EG Baxter SW Webster CL Papanicolaou A Lee SF Jiggins CD Synteny and chromosome evolution in the lepidoptera: Evidence from mapping in Heliconius melpomene Genetics 2007, 177:417-426. 2013725 17603110 10.1534/genetics.107.073122
    • (2007) Genetics , vol.177 , pp. 417-426
    • Pringle, E.G.1    Baxter, S.W.2    Webster, C.L.3    Papanicolaou, A.4    Lee, S.F.5    Jiggins, C.D.6
  • 12
    • 36348935174 scopus 로고    scopus 로고
    • Gene expression underlying adaptive variation in Heliconius wing patterns: Non-modular regulation of overlapping cinnabar and vermilion prepatterns
    • 10.1098/rspb.2007.1115
    • Reed RD McMillan WO Nagy LM Gene expression underlying adaptive variation in Heliconius wing patterns: Non-modular regulation of overlapping cinnabar and vermilion prepatterns Proc R Soc B Biol Sci 2008, 275:37-45. 10.1098/rspb.2007.1115
    • (2008) Proc R Soc B Biol Sci , vol.275 , pp. 37-45
    • Reed, R.D.1    McMillan, W.O.2    Nagy, L.M.3
  • 13
    • 0001171834 scopus 로고
    • Correlations of ultrastructural and pigmentation suggest how genes control development of wing scales on Heliconius butterflies
    • Gilbert LE Forrest HS Schultz TD Harvey DJ Correlations of ultrastructural and pigmentation suggest how genes control development of wing scales on Heliconius butterflies J Res Lep 1988, 26:141-160.
    • (1988) J Res Lep , vol.26 , pp. 141-160
    • Gilbert, L.E.1    Forrest, H.S.2    Schultz, T.D.3    Harvey, D.J.4
  • 16
    • 0037858186 scopus 로고
    • The genetics of some polymorphic forms of the butterflies Heliconius melpomene Linneaus and H. erato Linneaus, I: Major genes
    • Turner JRG Crane J The genetics of some polymorphic forms of the butterflies Heliconius melpomene Linneaus and H. erato Linneaus, I: major genes Zoologica 1962, 47:141-152.
    • (1962) Zoologica , vol.47 , pp. 141-152
    • Turner, J.R.G.1    Crane, J.2
  • 17
    • 0000245974 scopus 로고
    • The genetics of warning colour in Peruvian hybrid zones of Heliconius erato and H. melpomene
    • Mallet J The genetics of warning colour in Peruvian hybrid zones of Heliconius erato and H. melpomene Proc R Soc Lond B Biol Sci 1989, 236:163-185.
    • (1989) Proc R Soc Lond B Biol Sci , vol.236 , pp. 163-185
    • Mallet, J.1
  • 20
    • 34250813192 scopus 로고    scopus 로고
    • The Release 5.1 annotation of Drosophila melanogaster heterochromatin
    • 10.1126/science.1139815 17569856
    • Smith CD Shu SQ Mungall CJ Karpen GH The Release 5.1 annotation of Drosophila melanogaster heterochromatin Science 2007, 316:1586-1591. 10.1126/science.1139815 17569856
    • (2007) Science , vol.316 , pp. 1586-1591
    • Smith, C.D.1    Shu, S.Q.2    Mungall, C.J.3    Karpen, G.H.4
  • 23
    • 0035546066 scopus 로고    scopus 로고
    • What controls the length of noncoding DNA?
    • 10.1016/S0959-437X(00)00249-5 11682309
    • Comeron MJ What controls the length of noncoding DNA? Curr Opin Genet Dev 2001, 11:652-659. 10.1016/S0959-437X(00)00249-5 11682309
    • (2001) Curr Opin Genet Dev , vol.11 , pp. 652-659
    • Comeron, M.J.1
  • 24
    • 0036021703 scopus 로고    scopus 로고
    • DNA loss and evolution of genome size in Drosophila
    • 10.1023/A:1016076215168 12188050
    • Petrov DA DNA loss and evolution of genome size in Drosophila Genetica 2002, 115:81-91. 10.1023/A:1016076215168 12188050
    • (2002) Genetica , vol.115 , pp. 81-91
    • Petrov, D.A.1
  • 25
    • 34248335064 scopus 로고    scopus 로고
    • The genome size evolution of medaka (Oryzias latipes) and fugu (Takifugu rubripes)
    • 10.1266/ggs.82.135 17507779
    • Imai S Sasaki T Shimizu A Asakawa S Hori H Shimizu N The genome size evolution of medaka (Oryzias latipes) and fugu (Takifugu rubripes) Genes Genet Syst 2007, 82:135-144. 10.1266/ggs.82.135 17507779
    • (2007) Genes Genet Syst , vol.82 , pp. 135-144
    • Imai, S.1    Sasaki, T.2    Shimizu, A.3    Asakawa, S.4    Hori, H.5    Shimizu, N.6
  • 26
    • 49249101045 scopus 로고    scopus 로고
    • RepeatFinder@BioHPC http://cbsuapps.tc.cornell.edu/repeatfinder.aspx
    • RepeatFinder@BioHPC
  • 27
  • 28
    • 28844473478 scopus 로고    scopus 로고
    • Short retroposons in eukaryotic genomes
    • 10.1016/S0074-7696(05)47004-7 16344113
    • Kramerov DA Vassetzky NS Short retroposons in eukaryotic genomes Int Rev Cytol 2005, 247:165-221. 10.1016/S0074-7696(05)47004-7 16344113
    • (2005) Int Rev Cytol , vol.247 , pp. 165-221
    • Kramerov, D.A.1    Vassetzky, N.S.2
  • 29
    • 0032536892 scopus 로고    scopus 로고
    • Characterization of the P25 silk gene and associated insertion elements in Galleria mellonella
    • 10.1016/S0378-1119(98)00029-8 9583947
    • Yang CS Teng XY Zurovec M Scheller K Sehnal F Characterization of the P25 silk gene and associated insertion elements in Galleria mellonella Gene 1998, 209:157-165. 10.1016/S0378-1119(98)00029-8 9583947
    • (1998) Gene , vol.209 , pp. 157-165
    • Yang, C.S.1    Teng, X.Y.2    Zurovec, M.3    Scheller, K.4    Sehnal, F.5
  • 30
    • 2942744762 scopus 로고    scopus 로고
    • Molecular diversity and phylogenetic analysis of mariner-like transposons in the genome of the silkworm Bombyx mori
    • 10.1111/j.0962-1075.2004.00483.x 15157227
    • Kumaresan G Mathavan S Molecular diversity and phylogenetic analysis of mariner-like transposons in the genome of the silkworm Bombyx mori Insect Mol Biol 2004, 13:259-271. 10.1111/j.0962-1075.2004.00483.x 15157227
    • (2004) Insect Mol Biol , vol.13 , pp. 259-271
    • Kumaresan, G.1    Mathavan, S.2
  • 31
    • 0242418246 scopus 로고    scopus 로고
    • Phylogenetic shadowing of primate sequences to find functional regions of the human genome
    • 10.1126/science.1081331 12610304
    • Boffelli D McAuliffe J Ovcharenko D Lewis KD Ovcharenko I Pachter L Rubin EM Phylogenetic shadowing of primate sequences to find functional regions of the human genome Science 2003, 299:1391-1394. 10.1126/ science.1081331 12610304
    • (2003) Science , vol.299 , pp. 1391-1394
    • Boffelli, D.1    McAuliffe, J.2    Ovcharenko, D.3    Lewis, K.D.4    Ovcharenko, I.5    Pachter, L.6    Rubin, E.M.7
  • 32
    • 0038349948 scopus 로고    scopus 로고
    • Sequencing and comparison of yeast species to identify genes and regulatory elements
    • 10.1038/nature01644 12748633
    • Kellis M Patterson N Endrizzi M Birren B Lander ES Sequencing and comparison of yeast species to identify genes and regulatory elements Nature 2003, 423:241-254. 10.1038/nature01644 12748633
    • (2003) Nature , vol.423 , pp. 241-254
    • Kellis, M.1    Patterson, N.2    Endrizzi, M.3    Birren, B.4    Lander, E.S.5
  • 33
    • 33748889102 scopus 로고    scopus 로고
    • Parallel genetic architecture of parallel adaptive radiations in mimetic Heliconius butterflies
    • 1569775 16783007 10.1534/genetics.106.059527
    • Kronforst MR Kapan DD Gilbert E Parallel genetic architecture of parallel adaptive radiations in mimetic Heliconius butterflies Genetics 2006, 174:535-539. 1569775 16783007 10.1534/genetics.106.059527
    • (2006) Genetics , vol.174 , pp. 535-539
    • Kronforst, M.R.1    Kapan, D.D.2    Gilbert, E.3
  • 35
    • 13844315971 scopus 로고    scopus 로고
    • An improved protocol for the production of AFLP markers in a complex genomes by means of capillary electrophoresis
    • 10.1111/j.1439-0388.2004.00476.x 16130490
    • Papa R Troggio M Ajmone MP Nonnis MF An improved protocol for the production of AFLP markers in a complex genomes by means of capillary electrophoresis J Anim Breed Genet 2005, 122:62-68. 10.1111/ j.1439-0388.2004.00476.x 16130490
    • (2005) J Anim Breed Genet , vol.122 , pp. 62-68
    • Papa, R.1    Troggio, M.2    Ajmone, M.P.3    Nonnis, M.F.4
  • 36
    • 0026052189 scopus 로고
    • Identification of markers linked to disease-resistance genes by bulked segregant analysis: A rapid method to detect markers in specific genomic regions by using segregating populations
    • 52814 1682921 10.1073/pnas.88.21.9828
    • Michelmore RW Paran I Kesseli RV Identification of markers linked to disease-resistance genes by bulked segregant analysis: A rapid method to detect markers in specific genomic regions by using segregating populations Proc Natl Acad Sci USA 1991, 88:9828-9832. 52814 1682921 10.1073/pnas.88.21.9828
    • (1991) Proc Natl Acad Sci USA , vol.88 , pp. 9828-9832
    • Michelmore, R.W.1    Paran, I.2    Kesseli, R.V.3
  • 37
    • 0016736945 scopus 로고
    • Absence of crossing-over in female butterflies (Heliconius)
    • 10.1038/hdy.1975.29
    • Turner JRG Smiley J Absence of crossing-over in female butterflies (Heliconius) Heredity 1975 34 265 269 10.1038/hdy.1975.29 1055712
    • (1975) Heredity , vol.34 , pp. 265-269
    • Turner, J.R.G.1    Smiley, J.2
  • 38
    • 85005608771 scopus 로고
    • Achiasmatic oogenesis in the heliconiine butterflies
    • Suomalainen E Cook LM Turner JRG Achiasmatic oogenesis in the heliconiine butterflies Hereditas 1973, 74:302-304.
    • (1973) Hereditas , vol.74 , pp. 302-304
    • Suomalainen, E.1    Cook, L.M.2    Turner, J.R.G.3
  • 39
    • 4544272580 scopus 로고    scopus 로고
    • A new and versatile method for the successful conversion of AFLP markers into simple single locus markers
    • 156058 12736321 10.1093/nar/gng055
    • Brugmans B Hulst Van der RGM Visser RGF Lindhout P Van Eck HJ A new and versatile method for the successful conversion of AFLP markers into simple single locus markers Nucleic Acids Res 2003, e55. 156058 12736321 10.1093/nar/gng055
    • (2003) Nucleic Acids Res
    • Brugmans, B.1    Hulst, R.G.M.2    Visser, R.G.F.3    Lindhout, P.4    Van Eck, H.J.5
  • 41
    • 0030872838 scopus 로고    scopus 로고
    • PolyPhred: Automating the detection and genotyping of single nucleotide substitutions using fluorescence-based resequencing
    • 146817 9207020 10.1093/nar/25.14.2745
    • Nickerson DA Tobe VO Taylor SL PolyPhred: Automating the detection and genotyping of single nucleotide substitutions using fluorescence-based resequencing Nucleic Acids Res 1997, 25:2745- 2751. 146817 9207020 10.1093/nar/25.14.2745
    • (1997) Nucleic Acids Res , vol.25 , pp. 2745-2751
    • Nickerson, D.A.1    Tobe, V.O.2    Taylor, S.L.3
  • 42
    • 0029592773 scopus 로고
    • A new DNA sequence assembly program
    • 307504 8559656 10.1093/nar/23.24.4992
    • Bonfield JK Smith K Staden R A new DNA sequence assembly program Nucleic Acids Res 1995, 23:4992-4999. 307504 8559656 10.1093/nar/23.24.4992
    • (1995) Nucleic Acids Res , vol.23 , pp. 4992-4999
    • Bonfield, J.K.1    Smith, K.2    Staden, R.3
  • 47
    • 0037398368 scopus 로고    scopus 로고
    • LAGAN and Multi-LAGAN: Efficient tools for large-scale multiple alignment of genomic DNA
    • 430158 12654723 10.1101/gr.926603
    • Brudno M Do CB Cooper GM Kim MF Davydov E NISC Comparative Sequencing Program Green ED Sidow A Batzoglou S LAGAN and Multi-LAGAN: Efficient tools for large-scale multiple alignment of genomic DNA Genome Res 2003, 13:721-731. 430158 12654723 10.1101/gr.926603
    • (2003) Genome Res , vol.13 , pp. 721-731
    • Brudno, M.1    Do, C.B.2    Cooper, G.M.3    Kim, M.F.4    Davydov, E.5    Green, E.D.6    Sidow, A.7    Batzoglou, S.8
  • 48
    • 0035230042 scopus 로고    scopus 로고
    • A clustering method for repeat analysis in DNA sequences
    • research0027.0001-0027.0011
    • Volfovsky N Haas BJ Salzberg SL A clustering method for repeat analysis in DNA sequences Genome Biol 2001, 2. research0027.0001 0027.0011 10.1186/gb-2001-2-8-research0027
    • (2001) Genome Biol , vol.2
    • Volfovsky, N.1    Haas, B.J.2    Salzberg, S.L.3
  • 49
    • 0030305457 scopus 로고    scopus 로고
    • A language for data analysis and graphics
    • 10.2307/1390807
    • Ihaka R Gentleman R A language for data analysis and graphics J Comput Graph Statist 1996, 5:299-314. 10.2307/1390807
    • (1996) J Comput Graph Statist , vol.5 , pp. 299-314
    • Ihaka, R.1    Gentleman, R.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.