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Volumn 75, Issue 8, 2014, Pages 745-755

The analysis of VH and VL genes repertoires of Fab library built from peripheral B cells of human rabies virus vaccinated donors

Author keywords

Anti rabies virus immune repertoire IGHV and IGLV sequencing; Gene pairings; Somatic mutations

Indexed keywords

IMMUNOGLOBULIN F(AB) FRAGMENT; RABIES IMMUNOGLOBULIN; NANOBODY; PEPTIDE LIBRARY; PROTEIN BINDING; RABIES VACCINE;

EID: 84905088778     PISSN: 01988859     EISSN: 18791166     Source Type: Journal    
DOI: 10.1016/j.humimm.2014.05.005     Document Type: Article
Times cited : (9)

References (47)
  • 1
    • 0002809995 scopus 로고    scopus 로고
    • Immunoglobulins: structure and function
    • Lippincott-Raven, Philadelphia, W.E. Paul (Ed.)
    • Frazer J.K., Capre J.D. Immunoglobulins: structure and function. Fundamental immunology 1999, 37-74. Lippincott-Raven, Philadelphia. W.E. Paul (Ed.).
    • (1999) Fundamental immunology , pp. 37-74
    • Frazer, J.K.1    Capre, J.D.2
  • 2
    • 84864153342 scopus 로고    scopus 로고
    • The immunoglobulin heavy chain locus: genetic variation, missing data, and implications for human disease
    • Watson C.T., Breden F. The immunoglobulin heavy chain locus: genetic variation, missing data, and implications for human disease. Genes Immun 2012, 13(5):363-373.
    • (2012) Genes Immun , vol.13 , Issue.5 , pp. 363-373
    • Watson, C.T.1    Breden, F.2
  • 3
    • 0030240108 scopus 로고    scopus 로고
    • Avidity maturation, repertoire shift, and strain differences in antibodies to bacterial levan, a type 2 thymus-independent polysaccharide antigen
    • Boswell C.M., Stein K.E. Avidity maturation, repertoire shift, and strain differences in antibodies to bacterial levan, a type 2 thymus-independent polysaccharide antigen. J Immunol 1996, 157:1996-2005.
    • (1996) J Immunol , vol.157 , pp. 1996-2005
    • Boswell, C.M.1    Stein, K.E.2
  • 5
    • 0032193211 scopus 로고    scopus 로고
    • Role of kappa II-A2 light chain CDR-3 junctional residues in human antibody binding to the Haemophilus influenzae type b polysaccharide
    • Lucas A.H., Moulton K.D., Reason D.C. Role of kappa II-A2 light chain CDR-3 junctional residues in human antibody binding to the Haemophilus influenzae type b polysaccharide. J Immunol 1998, 161:3776-3780.
    • (1998) J Immunol , vol.161 , pp. 3776-3780
    • Lucas, A.H.1    Moulton, K.D.2    Reason, D.C.3
  • 6
    • 0025226085 scopus 로고
    • Phage antibodies: filamentous phage displaying antibody variable domains
    • McCafferty J., Griffiths A.D., Winter G., Chiswell D.J. Phage antibodies: filamentous phage displaying antibody variable domains. Nature 1990, 348:552-554.
    • (1990) Nature , vol.348 , pp. 552-554
    • McCafferty, J.1    Griffiths, A.D.2    Winter, G.3    Chiswell, D.J.4
  • 8
    • 0033978358 scopus 로고    scopus 로고
    • The human immunoglobulin loci introduced into mice: V (D) and J gene segment usage similar to that of adult humans
    • Gallo M.L., Ivanov V.E., Jakobovits A., Davis C.G. The human immunoglobulin loci introduced into mice: V (D) and J gene segment usage similar to that of adult humans. Eur J Immunol 2000, 30:534-540.
    • (2000) Eur J Immunol , vol.30 , pp. 534-540
    • Gallo, M.L.1    Ivanov, V.E.2    Jakobovits, A.3    Davis, C.G.4
  • 9
    • 0032867293 scopus 로고    scopus 로고
    • A fully human antibody neutralising biologically active human TGFβ2 for use in therapy
    • Thompson J.E., et al. A fully human antibody neutralising biologically active human TGFβ2 for use in therapy. J Immunol Methods 1999, 227:17-29.
    • (1999) J Immunol Methods , vol.227 , pp. 17-29
    • Thompson, J.E.1
  • 10
    • 44949280863 scopus 로고
    • Combinatorial immunoglobulin libraries on the surface of phage (phabs): rapid selection of antigen-specific Fabs
    • Barbas C.F., Lerner R.A. Combinatorial immunoglobulin libraries on the surface of phage (phabs): rapid selection of antigen-specific Fabs. Companion Methods Enzymol 1991, 2:119-124.
    • (1991) Companion Methods Enzymol , vol.2 , pp. 119-124
    • Barbas, C.F.1    Lerner, R.A.2
  • 11
    • 27144431943 scopus 로고    scopus 로고
    • Selecting and screening recombinant antibody libraries
    • Hoogenboom H.R. Selecting and screening recombinant antibody libraries. Nat Biotechnol 2005, 23:1105-1116.
    • (2005) Nat Biotechnol , vol.23 , pp. 1105-1116
    • Hoogenboom, H.R.1
  • 12
    • 34248136998 scopus 로고    scopus 로고
    • Design of synthetic antibody libraries
    • Benhar I. Design of synthetic antibody libraries. Expert Opin Biol Ther 2007, 5:763-769.
    • (2007) Expert Opin Biol Ther , vol.5 , pp. 763-769
    • Benhar, I.1
  • 13
    • 77956688921 scopus 로고    scopus 로고
    • Monoclonal antibodies isolated without screening by analyzing the variable-gene repertoire of plasma cells
    • Reddy S.T., Ge X., Miklos A.E., Hughes R.A., Kang S.H., Hoi K.H., et al. Monoclonal antibodies isolated without screening by analyzing the variable-gene repertoire of plasma cells. Nat Biotechnol 2010, 28:965-969.
    • (2010) Nat Biotechnol , vol.28 , pp. 965-969
    • Reddy, S.T.1    Ge, X.2    Miklos, A.E.3    Hughes, R.A.4    Kang, S.H.5    Hoi, K.H.6
  • 14
    • 77949528753 scopus 로고    scopus 로고
    • Next-generation phage display: integrating and comparing available molecular tools to enable cost-effective high-throughput analysis
    • Dias-Neto E., Nunes D.N., Giordano R.J., Sun J., Botz G.H., Yang K., et al. Next-generation phage display: integrating and comparing available molecular tools to enable cost-effective high-throughput analysis. PLoS One 2009, 4:e8338.
    • (2009) PLoS One , vol.4
    • Dias-Neto, E.1    Nunes, D.N.2    Giordano, R.J.3    Sun, J.4    Botz, G.H.5    Yang, K.6
  • 15
    • 73949116413 scopus 로고    scopus 로고
    • Precise determination of the diversity of a combinatorial antibody library gives insight into the human immunoglobulin repertoire
    • Glanville J., Zhai W., Berka J., Telman D., Huerta G., Mehta G.R., et al. Precise determination of the diversity of a combinatorial antibody library gives insight into the human immunoglobulin repertoire. Proc Natl Acad Sci USA 2009, 106:20216-20221.
    • (2009) Proc Natl Acad Sci USA , vol.106 , pp. 20216-20221
    • Glanville, J.1    Zhai, W.2    Berka, J.3    Telman, D.4    Huerta, G.5    Mehta, G.R.6
  • 16
    • 78649893449 scopus 로고    scopus 로고
    • By-passing in vitro screening-next generation sequencing technologies applied to antibody display and in silico candidate selection
    • Ravn U., Gueneau F., Baerlocher L., Osteras M., Desmurs M., Malinge P., et al. By-passing in vitro screening-next generation sequencing technologies applied to antibody display and in silico candidate selection. Nucleic Acids Res 2010, 38:e193.
    • (2010) Nucleic Acids Res , vol.38
    • Ravn, U.1    Gueneau, F.2    Baerlocher, L.3    Osteras, M.4    Desmurs, M.5    Malinge, P.6
  • 17
    • 0018405296 scopus 로고
    • A collaborative study on the testing of rabies immune globulin (human) by the mouse neutralization test (MNT) and the rapid fluorescent focus inhibition test (RFFIT)
    • Fitzgerald E.A., Cabasso V.J., Smith J.S., Rastogi S.C. A collaborative study on the testing of rabies immune globulin (human) by the mouse neutralization test (MNT) and the rapid fluorescent focus inhibition test (RFFIT). J Biol Stand 1979, 1979(7):67-72.
    • (1979) J Biol Stand , vol.1979 , Issue.7 , pp. 67-72
    • Fitzgerald, E.A.1    Cabasso, V.J.2    Smith, J.S.3    Rastogi, S.C.4
  • 18
    • 0023215716 scopus 로고
    • Human rabies immunoglobulin assayed by the rapid fluorescent focus inhibition test suppresses active rabies immunization
    • Gluck R., Wegmann A., Keller H., Hoskins J.M., Germanier R. Human rabies immunoglobulin assayed by the rapid fluorescent focus inhibition test suppresses active rabies immunization. J Biol Stand 1987, 15:177-183.
    • (1987) J Biol Stand , vol.15 , pp. 177-183
    • Gluck, R.1    Wegmann, A.2    Keller, H.3    Hoskins, J.M.4    Germanier, R.5
  • 19
    • 0034726419 scopus 로고    scopus 로고
    • Methods for the generation of chicken monoclonal antibody fragments by phage display
    • Andris-Widhopf J., Rader C., Steinberger P., Fuller R., Barbas C. Methods for the generation of chicken monoclonal antibody fragments by phage display. J Immunol Methods 2000, 242:159-181.
    • (2000) J Immunol Methods , vol.242 , pp. 159-181
    • Andris-Widhopf, J.1    Rader, C.2    Steinberger, P.3    Fuller, R.4    Barbas, C.5
  • 21
    • 0037212339 scopus 로고    scopus 로고
    • IMGT unique numbering for immunoglobulin and T cell receptor variable domains and Ig superfamily V-like domains
    • Lefranc M.P., Pommie C., Ruiz M., Giudicelli V., Foulquier E., Truong L., et al. IMGT unique numbering for immunoglobulin and T cell receptor variable domains and Ig superfamily V-like domains. Dev Comp Immunol 2003, 27:55-77.
    • (2003) Dev Comp Immunol , vol.27 , pp. 55-77
    • Lefranc, M.P.1    Pommie, C.2    Ruiz, M.3    Giudicelli, V.4    Foulquier, E.5    Truong, L.6
  • 22
    • 9644255622 scopus 로고    scopus 로고
    • IMGT unique numbering for immunoglobulin and T cell receptor constant domains and Ig superfamily C-like domains
    • Lefranc M.P., Pommie C., Kaas Q., Duprat E., Bosc N., Guiraudou D., et al. IMGT unique numbering for immunoglobulin and T cell receptor constant domains and Ig superfamily C-like domains. Dev Comp Immunol 2005, 29:185-203.
    • (2005) Dev Comp Immunol , vol.29 , pp. 185-203
    • Lefranc, M.P.1    Pommie, C.2    Kaas, Q.3    Duprat, E.4    Bosc, N.5    Guiraudou, D.6
  • 24
    • 79958033481 scopus 로고    scopus 로고
    • IMGT Collier de Perles for the variable (V), constant (C), and groove (G) domains of IG, TR, MH, IgSF, and MhSF
    • Lefranc M.P. IMGT Collier de Perles for the variable (V), constant (C), and groove (G) domains of IG, TR, MH, IgSF, and MhSF. Cold Spring Harb Protoc 2011.
    • (2011) Cold Spring Harb Protoc
    • Lefranc, M.P.1
  • 25
    • 0036200078 scopus 로고    scopus 로고
    • IMGT gene identification and Colliers de Perles of human immunoglobulins with known 3D structures
    • Ruiz M., Lefranc M.P. IMGT gene identification and Colliers de Perles of human immunoglobulins with known 3D structures. Immunogenetics 2002, 53:857-883.
    • (2002) Immunogenetics , vol.53 , pp. 857-883
    • Ruiz, M.1    Lefranc, M.P.2
  • 27
    • 0033593356 scopus 로고    scopus 로고
    • Analysis of heavy and light chain pairings indicates that receptor editing shapes the human antibody repertoire
    • de Wildt R.M., Hoet R.M., van Venrooij W.J., Tomlinson I.M., Winter G. Analysis of heavy and light chain pairings indicates that receptor editing shapes the human antibody repertoire. J Mol Biol 1999, 285:895-901.
    • (1999) J Mol Biol , vol.285 , pp. 895-901
    • de Wildt, R.M.1    Hoet, R.M.2    van Venrooij, W.J.3    Tomlinson, I.M.4    Winter, G.5
  • 28
    • 79952593462 scopus 로고    scopus 로고
    • B-cell receptor, clinical course and prognosis in chronic lymphocytic leukaemia: the growing saga of the IGHV3 subgroup gene usage
    • Dal-Bo M., Giudice I.D., Bomben R., Capello D., Bertoni F., Forconi F., et al. B-cell receptor, clinical course and prognosis in chronic lymphocytic leukaemia: the growing saga of the IGHV3 subgroup gene usage. Br J Haematol 2011, 153:3-14.
    • (2011) Br J Haematol , vol.153 , pp. 3-14
    • Dal-Bo, M.1    Giudice, I.D.2    Bomben, R.3    Capello, D.4    Bertoni, F.5    Forconi, F.6
  • 29
    • 79952640176 scopus 로고    scopus 로고
    • Rare antibodies from combinatorial libraries suggests an S.O.S. component of the human immunological repertoire
    • Lerner R. Rare antibodies from combinatorial libraries suggests an S.O.S. component of the human immunological repertoire. Mol Biosyst 2011, 7:1004-1012.
    • (2011) Mol Biosyst , vol.7 , pp. 1004-1012
    • Lerner, R.1
  • 30
    • 84455161936 scopus 로고    scopus 로고
    • Biased use of the IGHV4 family and evidence for antigen selection in Chlamydophila psittaci-negative ocular adnexal extranodal marginal zone lymphomas
    • Zhu D., Lossos C., Chapman-Fredricks J., Matthews J., Ikpatt O., Ruiz P., et al. Biased use of the IGHV4 family and evidence for antigen selection in Chlamydophila psittaci-negative ocular adnexal extranodal marginal zone lymphomas. PLoS One 2011, 6:e29114.
    • (2011) PLoS One , vol.6
    • Zhu, D.1    Lossos, C.2    Chapman-Fredricks, J.3    Matthews, J.4    Ikpatt, O.5    Ruiz, P.6
  • 31
    • 0033012615 scopus 로고    scopus 로고
    • Repertoire of human antibodies against the polysaccharide capsule of Streptococcus pneumoniae serotype 6B
    • Sun Y., Park M.K., Kim J., Diamond B., Solomon A., Nahm M.H. Repertoire of human antibodies against the polysaccharide capsule of Streptococcus pneumoniae serotype 6B. Infect Immun 1999, 1999(67):1172-1179.
    • (1999) Infect Immun , vol.1999 , Issue.67 , pp. 1172-1179
    • Sun, Y.1    Park, M.K.2    Kim, J.3    Diamond, B.4    Solomon, A.5    Nahm, M.H.6
  • 32
    • 0028787062 scopus 로고
    • A human antibody specific for hepatitis C virus core protein: synthesis in a bacterial system and characterization
    • Esposito G., Scarselli E., Cerino A., Mondelli M.U., La Monica N., Traboni C. A human antibody specific for hepatitis C virus core protein: synthesis in a bacterial system and characterization. Gene 1995, 164:203-209.
    • (1995) Gene , vol.164 , pp. 203-209
    • Esposito, G.1    Scarselli, E.2    Cerino, A.3    Mondelli, M.U.4    La Monica, N.5    Traboni, C.6
  • 33
    • 0029657928 scopus 로고    scopus 로고
    • Progressive decrease in VH3 gene family expression in plasma cells of HIV-infected patients
    • David D., Demaison C., Bani L., Theze J. Progressive decrease in VH3 gene family expression in plasma cells of HIV-infected patients. Int Immunol 1996, 8:1329-1333.
    • (1996) Int Immunol , vol.8 , pp. 1329-1333
    • David, D.1    Demaison, C.2    Bani, L.3    Theze, J.4
  • 35
    • 0031014086 scopus 로고    scopus 로고
    • Human Fab fragments specific for the Haemophilus influenzae B polysaccharide isolated from a bacteriophage combinatorial library use variable region gene combinations and express an idiotype that mirrors in vivo expression
    • Reason D.C., Wagner T.C., Lucas A.H. Human Fab fragments specific for the Haemophilus influenzae B polysaccharide isolated from a bacteriophage combinatorial library use variable region gene combinations and express an idiotype that mirrors in vivo expression. Infect Immun 1997, 65:261-266.
    • (1997) Infect Immun , vol.65 , pp. 261-266
    • Reason, D.C.1    Wagner, T.C.2    Lucas, A.H.3
  • 37
    • 0035889578 scopus 로고    scopus 로고
    • Analysis of antibodies of known structure suggests a lack of correspondence between the residues in contact with the antigen and those modified by somatic hypermutation
    • Ramirez-Benitez M.C., Almagro J.C. Analysis of antibodies of known structure suggests a lack of correspondence between the residues in contact with the antigen and those modified by somatic hypermutation. Proteins 2001, 45:199-206.
    • (2001) Proteins , vol.45 , pp. 199-206
    • Ramirez-Benitez, M.C.1    Almagro, J.C.2
  • 38
    • 33745323376 scopus 로고    scopus 로고
    • Trends in antibody sequence changes during the somatic hypermutation process
    • Clark L.A., Ganesan S., Papp S., Vlijmen H.W.V. Trends in antibody sequence changes during the somatic hypermutation process. J Immunol 2006, 177:333-340.
    • (2006) J Immunol , vol.177 , pp. 333-340
    • Clark, L.A.1    Ganesan, S.2    Papp, S.3    Vlijmen, H.W.V.4
  • 39
    • 72949120359 scopus 로고    scopus 로고
    • A germline knowledge based computational approach for determining antibody complementarity determining regions
    • Zhao S., Lu J. A germline knowledge based computational approach for determining antibody complementarity determining regions. Mol Immunol 2010, 47:694-700.
    • (2010) Mol Immunol , vol.47 , pp. 694-700
    • Zhao, S.1    Lu, J.2
  • 40
    • 1642307201 scopus 로고    scopus 로고
    • Identification of differences in the specificity-determining residues of antibodies that recognize antigens of different size: implications for the rational design of antibody repertoires
    • Almagro J.C. Identification of differences in the specificity-determining residues of antibodies that recognize antigens of different size: implications for the rational design of antibody repertoires. J Mol Recognit 2004, 17:132-143.
    • (2004) J Mol Recognit , vol.17 , pp. 132-143
    • Almagro, J.C.1
  • 41
    • 0028606741 scopus 로고
    • Antibody-antigen interactions: new structures and new conformational changes
    • Wilson I.A., Stanfield R.L. Antibody-antigen interactions: new structures and new conformational changes. Curr Opin Struct Biol 1994, 4:857-867.
    • (1994) Curr Opin Struct Biol , vol.4 , pp. 857-867
    • Wilson, I.A.1    Stanfield, R.L.2
  • 42
    • 0023525849 scopus 로고
    • Early restriction of the human antibody repertoire
    • Schroeder H.W., Hillson J.L., Perlmutter M. Early restriction of the human antibody repertoire. Science 1978, 238:791-793.
    • (1978) Science , vol.238 , pp. 791-793
    • Schroeder, H.W.1    Hillson, J.L.2    Perlmutter, M.3
  • 43
    • 0242551578 scopus 로고    scopus 로고
    • Expressed murine and human CDR-H3 intervals of equal length exhibit distinct repertoires that differ in their amino acid composition and predicted range of structures
    • Zemlin M., Klinger M., Link J., Zemlin C., Bauer K., Engler J.A., et al. Expressed murine and human CDR-H3 intervals of equal length exhibit distinct repertoires that differ in their amino acid composition and predicted range of structures. J Mol Biol 2003, 334:733-749.
    • (2003) J Mol Biol , vol.334 , pp. 733-749
    • Zemlin, M.1    Klinger, M.2    Link, J.3    Zemlin, C.4    Bauer, K.5    Engler, J.A.6
  • 44
    • 26044480339 scopus 로고    scopus 로고
    • Similarity and divergence in the development and expression of the mouse and human antibody repertoires
    • Schroeder H.W. Similarity and divergence in the development and expression of the mouse and human antibody repertoires. Dev Comp Immunol 2006, 30:119-135.
    • (2006) Dev Comp Immunol , vol.30 , pp. 119-135
    • Schroeder, H.W.1
  • 45
    • 80053303946 scopus 로고    scopus 로고
    • HuCAL PLATINUM, a synthetic Fab library optimized for sequence diversity and superior performance in mammalian expression systems
    • Prassler J., Thiel S., Pracht C., Polzer A., Peters S., Bauer M., et al. HuCAL PLATINUM, a synthetic Fab library optimized for sequence diversity and superior performance in mammalian expression systems. J Mol Biol 2011, 413:261-278.
    • (2011) J Mol Biol , vol.413 , pp. 261-278
    • Prassler, J.1    Thiel, S.2    Pracht, C.3    Polzer, A.4    Peters, S.5    Bauer, M.6
  • 47
    • 77953673590 scopus 로고    scopus 로고
    • Therapeutic antibodies, vaccines and antibodyomes
    • Dimitrov D.S. Therapeutic antibodies, vaccines and antibodyomes. MAbs 2010, 2:347-356.
    • (2010) MAbs , vol.2 , pp. 347-356
    • Dimitrov, D.S.1


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