-
1
-
-
78650854687
-
RNA helicases at work: Binding and rearranging
-
Jankowsky, E. RNA helicases at work: binding and rearranging Trends Biochem. Sci. 2011, 36 (1) 19-29
-
(2011)
Trends Biochem. Sci.
, vol.36
, Issue.1
, pp. 19-29
-
-
Jankowsky, E.1
-
2
-
-
84867850145
-
NMD: A multifaceted response to premature translational termination
-
Kervestin, S.; Jacobson, A. NMD: a multifaceted response to premature translational termination Nat. Rev. Mol. Cell Biol. 2012, 13 (11) 700-712
-
(2012)
Nat. Rev. Mol. Cell Biol.
, vol.13
, Issue.11
, pp. 700-712
-
-
Kervestin, S.1
Jacobson, A.2
-
3
-
-
84877818178
-
Nonsense-mediated mRNA decay - Mechanisms of substrate mRNA recognition and degradation in mammalian cells
-
Schweingruber, C.; Rufener, S. C.; Zund, D.; Yamashita, A.; Muhlemann, O. Nonsense-mediated mRNA decay-Mechanisms of substrate mRNA recognition and degradation in mammalian cells Biochim. Biophys. Acta 2013, 1829 (6-7) 612-623
-
(2013)
Biochim. Biophys. Acta
, vol.1829
, Issue.67
, pp. 612-623
-
-
Schweingruber, C.1
Rufener, S.C.2
Zund, D.3
Yamashita, A.4
Muhlemann, O.5
-
4
-
-
84856223380
-
MRNP quality control goes regulatory
-
Muhlemann, O.; Jensen, T. H. mRNP quality control goes regulatory Trends Genet. 2012, 28 (2) 70-77
-
(2012)
Trends Genet.
, vol.28
, Issue.2
, pp. 70-77
-
-
Muhlemann, O.1
Jensen, T.H.2
-
5
-
-
0037382643
-
Looking at mRNA decay pathways through the window of molecular evolution
-
Culbertson, M. R.; Leeds, P. F. Looking at mRNA decay pathways through the window of molecular evolution Curr. Opin. Genet. Dev. 2003, 13 (2) 207-214
-
(2003)
Curr. Opin. Genet. Dev.
, vol.13
, Issue.2
, pp. 207-214
-
-
Culbertson, M.R.1
Leeds, P.F.2
-
6
-
-
37849005006
-
NMD factors UPF2 and UPF3 bridge UPF1 to the exon junction complex and stimulate its RNA helicase activity
-
Chamieh, H.; Ballut, L.; Bonneau, F.; Le Hir, H. NMD factors UPF2 and UPF3 bridge UPF1 to the exon junction complex and stimulate its RNA helicase activity Nat. Struct. Mol. Biol. 2008, 15 (1) 85-93
-
(2008)
Nat. Struct. Mol. Biol.
, vol.15
, Issue.1
, pp. 85-93
-
-
Chamieh, H.1
Ballut, L.2
Bonneau, F.3
Le Hir, H.4
-
7
-
-
78651507958
-
The nonsense-mediated mRNA decay SMG-1 kinase is regulated by large-scale conformational changes controlled by SMG-8
-
Arias-Palomo, E.; Yamashita, A.; Fernandez, I. S.; Nunez-Ramirez, R.; Bamba, Y.; Izumi, N.; Ohno, S.; Llorca, O. The nonsense-mediated mRNA decay SMG-1 kinase is regulated by large-scale conformational changes controlled by SMG-8 Genes Dev. 2011, 25 (2) 153-164
-
(2011)
Genes Dev.
, vol.25
, Issue.2
, pp. 153-164
-
-
Arias-Palomo, E.1
Yamashita, A.2
Fernandez, I.S.3
Nunez-Ramirez, R.4
Bamba, Y.5
Izumi, N.6
Ohno, S.7
Llorca, O.8
-
8
-
-
65449178454
-
SMG-8 and SMG-9, two novel subunits of the SMG-1 complex, regulate remodeling of the mRNA surveillance complex during nonsense-mediated mRNA decay
-
Yamashita, A.; Izumi, N.; Kashima, I.; Ohnishi, T.; Saari, B.; Katsuhata, Y.; Muramatsu, R.; Morita, T.; Iwamatsu, A.; Hachiya, T.; Kurata, R.; Hirano, H.; Anderson, P.; Ohno, S. SMG-8 and SMG-9, two novel subunits of the SMG-1 complex, regulate remodeling of the mRNA surveillance complex during nonsense-mediated mRNA decay Genes Dev. 2009, 23 (9) 1091-1105
-
(2009)
Genes Dev.
, vol.23
, Issue.9
, pp. 1091-1105
-
-
Yamashita, A.1
Izumi, N.2
Kashima, I.3
Ohnishi, T.4
Saari, B.5
Katsuhata, Y.6
Muramatsu, R.7
Morita, T.8
Iwamatsu, A.9
Hachiya, T.10
Kurata, R.11
Hirano, H.12
Anderson, P.13
Ohno, S.14
-
9
-
-
0035449691
-
Human SMG-1, a novel phosphatidylinositol 3-kinase-related protein kinase, associates with components of the mRNA surveillance complex and is involved in the regulation of nonsense-mediated mRNA decay
-
Yamashita, A.; Ohnishi, T.; Kashima, I.; Taya, Y.; Ohno, S. Human SMG-1, a novel phosphatidylinositol 3-kinase-related protein kinase, associates with components of the mRNA surveillance complex and is involved in the regulation of nonsense-mediated mRNA decay Genes Dev. 2001, 15 (17) 2215-2228
-
(2001)
Genes Dev.
, vol.15
, Issue.17
, pp. 2215-2228
-
-
Yamashita, A.1
Ohnishi, T.2
Kashima, I.3
Taya, Y.4
Ohno, S.5
-
10
-
-
0037415691
-
SMG-5, required for C.elegans nonsense-mediated mRNA decay, associates with SMG-2 and protein phosphatase 2A
-
Anders, K. R.; Grimson, A.; Anderson, P. SMG-5, required for C.elegans nonsense-mediated mRNA decay, associates with SMG-2 and protein phosphatase 2A EMBO J. 2003, 22 (3) 641-650
-
(2003)
EMBO J.
, vol.22
, Issue.3
, pp. 641-650
-
-
Anders, K.R.1
Grimson, A.2
Anderson, P.3
-
11
-
-
10744232514
-
Phosphorylation of hUPF1 induces formation of mRNA surveillance complexes containing hSMG-5 and hSMG-7
-
Ohnishi, T.; Yamashita, A.; Kashima, I.; Schell, T.; Anders, K. R.; Grimson, A.; Hachiya, T.; Hentze, M. W.; Anderson, P.; Ohno, S. Phosphorylation of hUPF1 induces formation of mRNA surveillance complexes containing hSMG-5 and hSMG-7 Mol. Cell 2003, 12 (5) 1187-1200
-
(2003)
Mol. Cell
, vol.12
, Issue.5
, pp. 1187-1200
-
-
Ohnishi, T.1
Yamashita, A.2
Kashima, I.3
Schell, T.4
Anders, K.R.5
Grimson, A.6
Hachiya, T.7
Hentze, M.W.8
Anderson, P.9
Ohno, S.10
-
12
-
-
84856858152
-
N- and C-terminal Upf1 phosphorylations create binding platforms for SMG-6 and SMG-5:SMG-7 during NMD
-
Okada-Katsuhata, Y.; Yamashita, A.; Kutsuzawa, K.; Izumi, N.; Hirahara, F.; Ohno, S. N- and C-terminal Upf1 phosphorylations create binding platforms for SMG-6 and SMG-5:SMG-7 during NMD Nucleic Acids Res. 2012, 40 (3) 1251-1266
-
(2012)
Nucleic Acids Res.
, vol.40
, Issue.3
, pp. 1251-1266
-
-
Okada-Katsuhata, Y.1
Yamashita, A.2
Kutsuzawa, K.3
Izumi, N.4
Hirahara, F.5
Ohno, S.6
-
13
-
-
58149291462
-
Human proline-rich nuclear receptor coregulatory protein 2 mediates an interaction between mRNA surveillance machinery and decapping complex
-
Cho, H.; Kim, K. M.; Kim, Y. K. Human proline-rich nuclear receptor coregulatory protein 2 mediates an interaction between mRNA surveillance machinery and decapping complex Mol. Cell 2009, 33 (1) 75-86
-
(2009)
Mol. Cell
, vol.33
, Issue.1
, pp. 75-86
-
-
Cho, H.1
Kim, K.M.2
Kim, Y.K.3
-
14
-
-
8844245615
-
SMG7 acts as a molecular link between mRNA surveillance and mRNA decay
-
Unterholzner, L.; Izaurralde, E. SMG7 acts as a molecular link between mRNA surveillance and mRNA decay Mol. Cell 2004, 16 (4) 587-596
-
(2004)
Mol. Cell
, vol.16
, Issue.4
, pp. 587-596
-
-
Unterholzner, L.1
Izaurralde, E.2
-
15
-
-
84873026843
-
An unusual arrangement of two 14-3-3-like domains in the SMG5-SMG7 heterodimer is required for efficient nonsense-mediated mRNA decay
-
Jonas, S.; Weichenrieder, O.; Izaurralde, E. An unusual arrangement of two 14-3-3-like domains in the SMG5-SMG7 heterodimer is required for efficient nonsense-mediated mRNA decay Genes Dev. 2013, 27 (2) 211-225
-
(2013)
Genes Dev.
, vol.27
, Issue.2
, pp. 211-225
-
-
Jonas, S.1
Weichenrieder, O.2
Izaurralde, E.3
-
16
-
-
58149265041
-
SMG6 promotes endonucleolytic cleavage of nonsense mRNA in human cells
-
Eberle, A. B.; Lykke-Andersen, S.; Muhlemann, O.; Jensen, T. H. SMG6 promotes endonucleolytic cleavage of nonsense mRNA in human cells Nat. Struct Mol. Biol. 2009, 16 (1) 49-55
-
(2009)
Nat. Struct Mol. Biol.
, vol.16
, Issue.1
, pp. 49-55
-
-
Eberle, A.B.1
Lykke-Andersen, S.2
Muhlemann, O.3
Jensen, T.H.4
-
17
-
-
57049126216
-
SMG6 is the catalytic endonuclease that cleaves mRNAs containing nonsense codons in metazoan
-
Huntzinger, E.; Kashima, I.; Fauser, M.; Sauliere, J.; Izaurralde, E. SMG6 is the catalytic endonuclease that cleaves mRNAs containing nonsense codons in metazoan RNA 2008, 14 (12) 2609-2617
-
(2008)
RNA
, vol.14
, Issue.12
, pp. 2609-2617
-
-
Huntzinger, E.1
Kashima, I.2
Fauser, M.3
Sauliere, J.4
Izaurralde, E.5
-
18
-
-
0033835231
-
Characterization of the biochemical properties of the human Upf1 gene product that is involved in nonsense-mediated mRNA decay
-
Bhattacharya, A.; Czaplinski, K.; Trifillis, P.; He, F.; Jacobson, A.; Peltz, S. W. Characterization of the biochemical properties of the human Upf1 gene product that is involved in nonsense-mediated mRNA decay RNA 2000, 6 (9) 1226-1235
-
(2000)
RNA
, vol.6
, Issue.9
, pp. 1226-1235
-
-
Bhattacharya, A.1
Czaplinski, K.2
Trifillis, P.3
He, F.4
Jacobson, A.5
Peltz, S.W.6
-
19
-
-
32044435368
-
Binding of a novel SMG-1-Upf1-eRF1-eRF3 complex (SURF) to the exon junction complex triggers Upf1 phosphorylation and nonsense-mediated mRNA decay
-
Kashima, I.; Yamashita, A.; Izumi, N.; Kataoka, N.; Morishita, R.; Hoshino, S.; Ohno, M.; Dreyfuss, G.; Ohno, S. Binding of a novel SMG-1-Upf1-eRF1-eRF3 complex (SURF) to the exon junction complex triggers Upf1 phosphorylation and nonsense-mediated mRNA decay Genes Dev. 2006, 20 (3) 355-367
-
(2006)
Genes Dev.
, vol.20
, Issue.3
, pp. 355-367
-
-
Kashima, I.1
Yamashita, A.2
Izumi, N.3
Kataoka, N.4
Morishita, R.5
Hoshino, S.6
Ohno, M.7
Dreyfuss, G.8
Ohno, S.9
-
20
-
-
78649949096
-
Upf1 ATPase-dependent mRNP disassembly is required for completion of nonsense- mediated mRNA decay
-
Franks, T. M.; Singh, G.; Lykke-Andersen, J. Upf1 ATPase-dependent mRNP disassembly is required for completion of nonsense- mediated mRNA decay Cell 2010, 143 (6) 938-950
-
(2010)
Cell
, vol.143
, Issue.6
, pp. 938-950
-
-
Franks, T.M.1
Singh, G.2
Lykke-Andersen, J.3
-
21
-
-
49949105213
-
The multiple lives of NMD factors: Balancing roles in gene and genome regulation
-
Isken, O.; Maquat, L. E. The multiple lives of NMD factors: balancing roles in gene and genome regulation Nat. Rev. Genet 2008, 9, 699-712
-
(2008)
Nat. Rev. Genet
, vol.9
, pp. 699-712
-
-
Isken, O.1
Maquat, L.E.2
-
22
-
-
12944327374
-
Mammalian Staufen1 recruits Upf1 to specific mRNA 3′UTRs so as to elicit mRNA decay
-
Kim, Y. K.; Furic, L.; Desgroseillers, L.; Maquat, L. E. Mammalian Staufen1 recruits Upf1 to specific mRNA 3′UTRs so as to elicit mRNA decay Cell 2005, 120 (2) 195-208
-
(2005)
Cell
, vol.120
, Issue.2
, pp. 195-208
-
-
Kim, Y.K.1
Furic, L.2
Desgroseillers, L.3
Maquat, L.E.4
-
23
-
-
26944503146
-
Regulated degradation of replication-dependent histone mRNAs requires both ATR and Upf1
-
Kaygun, H.; Marzluff, W. F. Regulated degradation of replication- dependent histone mRNAs requires both ATR and Upf1 Nat. Struct. Mol. Biol. 2005, 12 (9) 794-800
-
(2005)
Nat. Struct. Mol. Biol.
, vol.12
, Issue.9
, pp. 794-800
-
-
Kaygun, H.1
Marzluff, W.F.2
-
24
-
-
80053615725
-
Human UPF1 interacts with TPP1 and telomerase and sustains telomere leading-strand replication
-
Chawla, R.; Redon, S.; Raftopoulou, C.; Wischnewski, H.; Gagos, S.; Azzalin, C. M. Human UPF1 interacts with TPP1 and telomerase and sustains telomere leading-strand replication EMBO J. 2011, 30 (19) 4047-4058
-
(2011)
EMBO J.
, vol.30
, Issue.19
, pp. 4047-4058
-
-
Chawla, R.1
Redon, S.2
Raftopoulou, C.3
Wischnewski, H.4
Gagos, S.5
Azzalin, C.M.6
-
25
-
-
32944458421
-
The human RNA surveillance factor UPF1 is required for S phase progression and genome stability
-
Azzalin, C. M.; Lingner, J. The human RNA surveillance factor UPF1 is required for S phase progression and genome stability Curr. Biol. 2006, 16 (4) 433-439
-
(2006)
Curr. Biol.
, vol.16
, Issue.4
, pp. 433-439
-
-
Azzalin, C.M.1
Lingner, J.2
-
26
-
-
0036583926
-
Stable isotope labeling by amino acids in cell culture, SILAC, as a simple and accurate approach to expression proteomics
-
Ong, S. E.; Blagoev, B.; Kratchmarova, I.; Kristensen, D. B.; Steen, H.; Pandey, A.; Mann, M. Stable isotope labeling by amino acids in cell culture, SILAC, as a simple and accurate approach to expression proteomics Mol. Cell. Proteomics 2002, 1 (5) 376-386
-
(2002)
Mol. Cell. Proteomics
, vol.1
, Issue.5
, pp. 376-386
-
-
Ong, S.E.1
Blagoev, B.2
Kratchmarova, I.3
Kristensen, D.B.4
Steen, H.5
Pandey, A.6
Mann, M.7
-
27
-
-
52649167339
-
Prevention of amino acid conversion in SILAC experiments with embryonic stem cells
-
Bendall, S. C.; Hughes, C.; Stewart, M. H.; Doble, B.; Bhatia, M.; Lajoie, G. A. Prevention of amino acid conversion in SILAC experiments with embryonic stem cells Mol. Cell. Proteomics 2008, 7 (9) 1587-1597
-
(2008)
Mol. Cell. Proteomics
, vol.7
, Issue.9
, pp. 1587-1597
-
-
Bendall, S.C.1
Hughes, C.2
Stewart, M.H.3
Doble, B.4
Bhatia, M.5
Lajoie, G.A.6
-
28
-
-
34548178909
-
In-gel digestion for mass spectrometric characterization of proteins and proteomes
-
Shevchenko, A.; Tomas, H.; Havlis, J.; Olsen, J. V.; Mann, M. In-gel digestion for mass spectrometric characterization of proteins and proteomes Nat. Protoc. 2006, 1 (6) 2856-2860
-
(2006)
Nat. Protoc.
, vol.1
, Issue.6
, pp. 2856-2860
-
-
Shevchenko, A.1
Tomas, H.2
Havlis, J.3
Olsen, J.V.4
Mann, M.5
-
29
-
-
34548183872
-
Protocol for micro-purification, enrichment, pre-fractionation and storage of peptides for proteomics using StageTips
-
Rappsilber, J.; Mann, M.; Ishihama, Y. Protocol for micro-purification, enrichment, pre-fractionation and storage of peptides for proteomics using StageTips Nat. Protoc. 2007, 2 (8) 1896-1906
-
(2007)
Nat. Protoc.
, vol.2
, Issue.8
, pp. 1896-1906
-
-
Rappsilber, J.1
Mann, M.2
Ishihama, Y.3
-
30
-
-
79953701087
-
Andromeda: A peptide search engine integrated into the MaxQuant environment
-
Cox, J.; Neuhauser, N.; Michalski, A.; Scheltema, R. A.; Olsen, J. V.; Mann, M. Andromeda: a peptide search engine integrated into the MaxQuant environment J. Proteome Res. 2011, 10 (4) 1794-1805
-
(2011)
J. Proteome Res.
, vol.10
, Issue.4
, pp. 1794-1805
-
-
Cox, J.1
Neuhauser, N.2
Michalski, A.3
Scheltema, R.A.4
Olsen, J.V.5
Mann, M.6
-
31
-
-
81755172088
-
Autoregulation of the nonsense-mediated mRNA decay pathway in human cells
-
Yepiskoposyan, H.; Aeschimann, F.; Nilsson, D.; Okoniewski, M.; Muhlemann, O. Autoregulation of the nonsense-mediated mRNA decay pathway in human cells RNA 2011, 17 (12) 2108-2118
-
(2011)
RNA
, vol.17
, Issue.12
, pp. 2108-2118
-
-
Yepiskoposyan, H.1
Aeschimann, F.2
Nilsson, D.3
Okoniewski, M.4
Muhlemann, O.5
-
32
-
-
28644444870
-
A GFP-based reporter system to monitor nonsense-mediated mRNA decay
-
Paillusson, A.; Hirschi, N.; Vallan, C.; Azzalin, C. M.; Muhlemann, O. A GFP-based reporter system to monitor nonsense-mediated mRNA decay Nucleic Acids Res. 2005, 33 (6) e54
-
(2005)
Nucleic Acids Res.
, vol.33
, Issue.6
, pp. 54
-
-
Paillusson, A.1
Hirschi, N.2
Vallan, C.3
Azzalin, C.M.4
Muhlemann, O.5
-
33
-
-
3042796497
-
Efficient downregulation of immunoglobulin mu mRNA with premature translation-termination codons requires the 5′-half of the VDJ exon
-
Buhler, M.; Paillusson, A.; Muhlemann, O. Efficient downregulation of immunoglobulin mu mRNA with premature translation-termination codons requires the 5′-half of the VDJ exon Nucleic Acids Res. 2004, 32 (11) 3304-3315
-
(2004)
Nucleic Acids Res.
, vol.32
, Issue.11
, pp. 3304-3315
-
-
Buhler, M.1
Paillusson, A.2
Muhlemann, O.3
-
34
-
-
84881477715
-
Translation-dependent displacement of UPF1 from coding sequences causes its enrichment in 3′ UTRs
-
Zund, D.; Gruber, A. R.; Zavolan, M.; Muhlemann, O. Translation-dependent displacement of UPF1 from coding sequences causes its enrichment in 3′ UTRs Nat. Struct Mol. Biol. 2013, 20 (8) 936-943
-
(2013)
Nat. Struct Mol. Biol.
, vol.20
, Issue.8
, pp. 936-943
-
-
Zund, D.1
Gruber, A.R.2
Zavolan, M.3
Muhlemann, O.4
-
35
-
-
84885069820
-
Global analyses of UPF1 binding and function reveals expanded scope of nonsense-mediated mRNA decay
-
Hurt, J. A.; Robertson, A. D.; Burge, C. B. Global analyses of UPF1 binding and function reveals expanded scope of nonsense-mediated mRNA decay Genome Res. 2013, 23, 1636-1650
-
(2013)
Genome Res.
, vol.23
, pp. 1636-1650
-
-
Hurt, J.A.1
Robertson, A.D.2
Burge, C.B.3
-
36
-
-
0034704201
-
Human Upf proteins target an mRNA for nonsense-mediated decay when bound downstream of a termination codon
-
Lykke-Andersen, J.; Shu, M. D.; Steitz, J. A. Human Upf proteins target an mRNA for nonsense-mediated decay when bound downstream of a termination codon Cell 2000, 103 (7) 1121-1131
-
(2000)
Cell
, vol.103
, Issue.7
, pp. 1121-1131
-
-
Lykke-Andersen, J.1
Shu, M.D.2
Steitz, J.A.3
-
37
-
-
84872195078
-
Staufen2 functions in Staufen1-mediated mRNA decay by binding to itself and its paralog and promoting UPF1 helicase but not ATPase activity
-
Park, E.; Gleghorn, M. L.; Maquat, L. E. Staufen2 functions in Staufen1-mediated mRNA decay by binding to itself and its paralog and promoting UPF1 helicase but not ATPase activity Proc. Natl. Acad. Sci. U. S. A. 2012, 110 (2) 405-412
-
(2012)
Proc. Natl. Acad. Sci. U. S. A.
, vol.110
, Issue.2
, pp. 405-412
-
-
Park, E.1
Gleghorn, M.L.2
Maquat, L.E.3
-
38
-
-
41949113083
-
Upf1 phosphorylation triggers translational repression during nonsense-mediated mRNA decay
-
Isken, O.; Kim, Y. K.; Hosoda, N.; Mayeur, G. L.; Hershey, J. W.; Maquat, L. E. Upf1 phosphorylation triggers translational repression during nonsense-mediated mRNA decay Cell 2008, 133 (2) 314-327
-
(2008)
Cell
, vol.133
, Issue.2
, pp. 314-327
-
-
Isken, O.1
Kim, Y.K.2
Hosoda, N.3
Mayeur, G.L.4
Hershey, J.W.5
Maquat, L.E.6
-
39
-
-
34547659166
-
Human INT6/eIF3e is required for nonsense-mediated mRNA decay
-
Morris, C.; Wittmann, J.; Jack, H. M.; Jalinot, P. Human INT6/eIF3e is required for nonsense-mediated mRNA decay EMBO Rep. 2007, 8 (6) 596-602
-
(2007)
EMBO Rep.
, vol.8
, Issue.6
, pp. 596-602
-
-
Morris, C.1
Wittmann, J.2
Jack, H.M.3
Jalinot, P.4
-
40
-
-
84856875524
-
Interaction of PABPC1 with the translation initiation complex is critical to the NMD resistance of AUG-proximal nonsense mutations
-
Peixeiro, I.; Inacio, A.; Barbosa, C.; Silva, A. L.; Liebhaber, S. A.; Romao, L. Interaction of PABPC1 with the translation initiation complex is critical to the NMD resistance of AUG-proximal nonsense mutations Nucleic Acids Res. 2011, 40 (3) 1160-1173
-
(2011)
Nucleic Acids Res.
, vol.40
, Issue.3
, pp. 1160-1173
-
-
Peixeiro, I.1
Inacio, A.2
Barbosa, C.3
Silva, A.L.4
Liebhaber, S.A.5
Romao, L.6
-
41
-
-
81555219350
-
Crystal structure of the eukaryotic 60S ribosomal subunit in complex with initiation factor 6
-
Klinge, S.; Voigts-Hoffmann, F.; Leibundgut, M.; Arpagaus, S.; Ban, N. Crystal structure of the eukaryotic 60S ribosomal subunit in complex with initiation factor 6 Science 2011, 334 (6058) 941-948
-
(2011)
Science
, vol.334
, Issue.6058
, pp. 941-948
-
-
Klinge, S.1
Voigts-Hoffmann, F.2
Leibundgut, M.3
Arpagaus, S.4
Ban, N.5
-
42
-
-
79951510534
-
Crystal structure of the eukaryotic 40S ribosomal subunit in complex with initiation factor 1
-
Rabl, J.; Leibundgut, M.; Ataide, S. F.; Haag, A.; Ban, N. Crystal structure of the eukaryotic 40S ribosomal subunit in complex with initiation factor 1 Science 2010, 331 (6018) 730-736
-
(2010)
Science
, vol.331
, Issue.6018
, pp. 730-736
-
-
Rabl, J.1
Leibundgut, M.2
Ataide, S.F.3
Haag, A.4
Ban, N.5
-
43
-
-
84880695650
-
Yeast Upf1 CH domain interacts with Rps26 of the 40S ribosomal subunit
-
Min, E. E.; Roy, B.; Amrani, N.; He, F.; Jacobson, A. Yeast Upf1 CH domain interacts with Rps26 of the 40S ribosomal subunit RNA 2013, 19 (8) 1105-1115
-
(2013)
RNA
, vol.19
, Issue.8
, pp. 1105-1115
-
-
Min, E.E.1
Roy, B.2
Amrani, N.3
He, F.4
Jacobson, A.5
-
44
-
-
0041865284
-
82-FIP, a novel FMRP (fragile X mental retardation protein) interacting protein, shows a cell cycle-dependent intracellular localization
-
Bardoni, B.; Castets, M.; Huot, M. E.; Schenck, A.; Adinolfi, S.; Corbin, F.; Pastore, A.; Khandjian, E. W.; Mandel, J. L. 82-FIP, a novel FMRP (fragile X mental retardation protein) interacting protein, shows a cell cycle-dependent intracellular localization Hum. Mol. Genet. 2003, 12 (14) 1689-1698
-
(2003)
Hum. Mol. Genet.
, vol.12
, Issue.14
, pp. 1689-1698
-
-
Bardoni, B.1
Castets, M.2
Huot, M.E.3
Schenck, A.4
Adinolfi, S.5
Corbin, F.6
Pastore, A.7
Khandjian, E.W.8
Mandel, J.L.9
-
45
-
-
84884692094
-
Comparison of EJC-enhanced and EJC-independent NMD in human cells reveals two partially redundant degradation pathways
-
10.1261/rna.038893.113.
-
Metze, S.; Herzog, V. A.; Ruepp, M. D.; Muhlemann, O. Comparison of EJC-enhanced and EJC-independent NMD in human cells reveals two partially redundant degradation pathways. RNA 2013, 10.1261/rna.038893.113.
-
(2013)
RNA
-
-
Metze, S.1
Herzog, V.A.2
Ruepp, M.D.3
Muhlemann, O.4
-
46
-
-
80052979901
-
RNA Homeostasis Governed by Cell Type-Specific and Branched Feedback Loops Acting on NMD
-
Huang, L.; Lou, C. H.; Chan, W.; Shum, E. Y.; Shao, A.; Stone, E.; Karam, R.; Song, H. W.; Wilkinson, M. F. RNA Homeostasis Governed by Cell Type-Specific and Branched Feedback Loops Acting on NMD Mol. Cell 2011, 43 (6) 950-961
-
(2011)
Mol. Cell
, vol.43
, Issue.6
, pp. 950-961
-
-
Huang, L.1
Lou, C.H.2
Chan, W.3
Shum, E.Y.4
Shao, A.5
Stone, E.6
Karam, R.7
Song, H.W.8
Wilkinson, M.F.9
-
47
-
-
79959925808
-
BioProfiling.de: Analytical web portal for high-throughput cell biology
-
Antonov, A. V. BioProfiling.de: analytical web portal for high-throughput cell biology Nucleic Acids Res. 2011, 39 (Web Server issue) W323-W327
-
(2011)
Nucleic Acids Res.
, vol.39
, Issue.WEB SERVER ISSUE
-
-
Antonov, A.V.1
-
48
-
-
22344438756
-
Recruitment of the human TREX complex to mRNA during splicing
-
Masuda, S.; Das, R.; Cheng, H.; Hurt, E.; Dorman, N.; Reed, R. Recruitment of the human TREX complex to mRNA during splicing Genes Dev. 2005, 19 (13) 1512-1517
-
(2005)
Genes Dev.
, vol.19
, Issue.13
, pp. 1512-1517
-
-
Masuda, S.1
Das, R.2
Cheng, H.3
Hurt, E.4
Dorman, N.5
Reed, R.6
-
49
-
-
33845626622
-
Human mRNA export machinery recruited to the 5′ end of mRNA
-
Cheng, H.; Dufu, K.; Lee, C. S.; Hsu, J. L.; Dias, A.; Reed, R. Human mRNA export machinery recruited to the 5′ end of mRNA Cell 2006, 127 (7) 1389-1400
-
(2006)
Cell
, vol.127
, Issue.7
, pp. 1389-1400
-
-
Cheng, H.1
Dufu, K.2
Lee, C.S.3
Hsu, J.L.4
Dias, A.5
Reed, R.6
-
50
-
-
84860473143
-
MRNA export and the TREX complex
-
Katahira, J. mRNA export and the TREX complex Biochim. Biophys. Acta 2012, 1819 (6) 507-513
-
(2012)
Biochim. Biophys. Acta
, vol.1819
, Issue.6
, pp. 507-513
-
-
Katahira, J.1
-
51
-
-
0034672093
-
The spliceosome deposits multiple proteins 20-24 nucleotides upstream of mRNA exon-exon junctions
-
Le Hir, H.; Izaurralde, E.; Maquat, L. E.; Moore, M. J. The spliceosome deposits multiple proteins 20-24 nucleotides upstream of mRNA exon-exon junctions EMBO J. 2000, 19 (24) 6860-6869
-
(2000)
EMBO J.
, vol.19
, Issue.24
, pp. 6860-6869
-
-
Le Hir, H.1
Izaurralde, E.2
Maquat, L.E.3
Moore, M.J.4
-
52
-
-
84866916889
-
CWC22 Connects Pre-mRNA Splicing and Exon Junction Complex Assembly
-
Steckelberg, A. L.; Boehm, V.; Gromadzka, A. M.; Gehring, N. H. CWC22 Connects Pre-mRNA Splicing and Exon Junction Complex Assembly Cell Rep. 2012, 2 (3) 454-461
-
(2012)
Cell Rep.
, vol.2
, Issue.3
, pp. 454-461
-
-
Steckelberg, A.L.1
Boehm, V.2
Gromadzka, A.M.3
Gehring, N.H.4
-
53
-
-
84867232894
-
Human CWC22 escorts the helicase eIF4AIII to spliceosomes and promotes exon junction complex assembly
-
Barbosa, I.; Haque, N.; Fiorini, F.; Barrandon, C.; Tomasetto, C.; Blanchette, M.; Le Hir, H. Human CWC22 escorts the helicase eIF4AIII to spliceosomes and promotes exon junction complex assembly Nat. Struct Mol. Biol. 2012, 19 (10) 983-990
-
(2012)
Nat. Struct Mol. Biol.
, vol.19
, Issue.10
, pp. 983-990
-
-
Barbosa, I.1
Haque, N.2
Fiorini, F.3
Barrandon, C.4
Tomasetto, C.5
Blanchette, M.6
Le Hir, H.7
-
54
-
-
0032567487
-
Identification of STRAP, a novel WD domain protein in transforming growth factor-beta signaling
-
Datta, P. K.; Chytil, A.; Gorska, A. E.; Moses, H. L. Identification of STRAP, a novel WD domain protein in transforming growth factor-beta signaling J. Biol. Chem. 1998, 273 (52) 34671-34674
-
(1998)
J. Biol. Chem.
, vol.273
, Issue.52
, pp. 34671-34674
-
-
Datta, P.K.1
Chytil, A.2
Gorska, A.E.3
Moses, H.L.4
-
55
-
-
27544502473
-
Unrip, a factor implicated in cap-independent translation, associates with the cytosolic SMN complex and influences its intracellular localization
-
Grimmler, M.; Otter, S.; Peter, C.; Muller, F.; Chari, A.; Fischer, U. Unrip, a factor implicated in cap-independent translation, associates with the cytosolic SMN complex and influences its intracellular localization Hum. Mol. Genet. 2005, 14 (20) 3099-3111
-
(2005)
Hum. Mol. Genet.
, vol.14
, Issue.20
, pp. 3099-3111
-
-
Grimmler, M.1
Otter, S.2
Peter, C.3
Muller, F.4
Chari, A.5
Fischer, U.6
-
56
-
-
0033557935
-
Unr, a cellular cytoplasmic RNA-binding protein with five cold-shock domains, is required for internal initiation of translation of human rhinovirus RNA
-
Hunt, S. L.; Hsuan, J. J.; Totty, N.; Jackson, R. J. unr, a cellular cytoplasmic RNA-binding protein with five cold-shock domains, is required for internal initiation of translation of human rhinovirus RNA Genes Dev. 1999, 13 (4) 437-448
-
(1999)
Genes Dev.
, vol.13
, Issue.4
, pp. 437-448
-
-
Hunt, S.L.1
Hsuan, J.J.2
Totty, N.3
Jackson, R.J.4
-
57
-
-
27144478105
-
CBP80 promotes interaction of Upf1 with Upf2 during nonsense-mediated mRNA decay in mammalian cells
-
Hosoda, N.; Kim, Y. K.; Lejeune, F.; Maquat, L. E. CBP80 promotes interaction of Upf1 with Upf2 during nonsense-mediated mRNA decay in mammalian cells Nat. Struct. Mol. Biol. 2005, 12 (10) 893-901
-
(2005)
Nat. Struct. Mol. Biol.
, vol.12
, Issue.10
, pp. 893-901
-
-
Hosoda, N.1
Kim, Y.K.2
Lejeune, F.3
Maquat, L.E.4
-
58
-
-
77955339642
-
UPF1 association with the cap-binding protein, CBP80, promotes nonsense-mediated mRNA decay at two distinct steps
-
Hwang, J.; Sato, H.; Tang, Y.; Matsuda, D.; Maquat, L. E. UPF1 association with the cap-binding protein, CBP80, promotes nonsense-mediated mRNA decay at two distinct steps Mol. Cell 2010, 39 (3) 396-409
-
(2010)
Mol. Cell
, vol.39
, Issue.3
, pp. 396-409
-
-
Hwang, J.1
Sato, H.2
Tang, Y.3
Matsuda, D.4
Maquat, L.E.5
-
59
-
-
77955326776
-
The pioneer round of translation: Features and functions
-
Maquat, L. E.; Tarn, W. Y.; Isken, O. The pioneer round of translation: features and functions Cell 2010, 142 (3) 368-374
-
(2010)
Cell
, vol.142
, Issue.3
, pp. 368-374
-
-
Maquat, L.E.1
Tarn, W.Y.2
Isken, O.3
-
60
-
-
84878916831
-
EIF4E-bound mRNPs are substrates for nonsense-mediated mRNA decay in mammalian cells
-
Rufener, S. C.; Muhlemann, O. eIF4E-bound mRNPs are substrates for nonsense-mediated mRNA decay in mammalian cells Nat. Struct. Mol. Biol. 2013, 20 (6) 710-717
-
(2013)
Nat. Struct. Mol. Biol.
, vol.20
, Issue.6
, pp. 710-717
-
-
Rufener, S.C.1
Muhlemann, O.2
-
61
-
-
84878945009
-
Nonsense-mediated mRNA decay occurs during eIF4F-dependent translation in human cells
-
Durand, S.; Lykke-Andersen, J. Nonsense-mediated mRNA decay occurs during eIF4F-dependent translation in human cells Nat. Struct. Mol. Biol. 2013, 20 (6) 702-709
-
(2013)
Nat. Struct. Mol. Biol.
, vol.20
, Issue.6
, pp. 702-709
-
-
Durand, S.1
Lykke-Andersen, J.2
-
62
-
-
57449083256
-
Mass spectrometry reveals modularity and a complete subunit interaction map of the eukaryotic translation factor eIF3
-
Zhou, M.; Sandercock, A. M.; Fraser, C. S.; Ridlova, G.; Stephens, E.; Schenauer, M. R.; Yokoi-Fong, T.; Barsky, D.; Leary, J. A.; Hershey, J. W.; Doudna, J. A.; Robinson, C. V. Mass spectrometry reveals modularity and a complete subunit interaction map of the eukaryotic translation factor eIF3 Proc. Natl. Acad. Sci. U. S. A. 2008, 105 (47) 18139-18144
-
(2008)
Proc. Natl. Acad. Sci. U. S. A.
, vol.105
, Issue.47
, pp. 18139-18144
-
-
Zhou, M.1
Sandercock, A.M.2
Fraser, C.S.3
Ridlova, G.4
Stephens, E.5
Schenauer, M.R.6
Yokoi-Fong, T.7
Barsky, D.8
Leary, J.A.9
Hershey, J.W.10
Doudna, J.A.11
Robinson, C.V.12
-
63
-
-
84861534940
-
Translation initiation on mRNAs bound by nuclear cap-binding protein complex CBP80/20 requires interaction between CBP80/20-dependent translation initiation factor and eukaryotic translation initiation factor 3g
-
Choe, J.; Oh, N.; Park, S.; Lee, Y. K.; Song, O. K.; Locker, N.; Chi, S. G.; Kim, Y. K. Translation initiation on mRNAs bound by nuclear cap-binding protein complex CBP80/20 requires interaction between CBP80/20-dependent translation initiation factor and eukaryotic translation initiation factor 3g J. Biol. Chem. 2012, 287 (22) 18500-18509
-
(2012)
J. Biol. Chem.
, vol.287
, Issue.22
, pp. 18500-18509
-
-
Choe, J.1
Oh, N.2
Park, S.3
Lee, Y.K.4
Song, O.K.5
Locker, N.6
Chi, S.G.7
Kim, Y.K.8
-
64
-
-
0033229867
-
An internal open reading frame triggers nonsense-mediated decay of the yeast SPT10 mRNA
-
Welch, E. M.; Jacobson, A. An internal open reading frame triggers nonsense-mediated decay of the yeast SPT10 mRNA EMBO J. 1999, 18 (21) 6134-6145
-
(1999)
EMBO J.
, vol.18
, Issue.21
, pp. 6134-6145
-
-
Welch, E.M.1
Jacobson, A.2
-
65
-
-
4043062382
-
UNR, a new partner of poly(A)-binding protein, plays a key role in translationally coupled mRNA turnover mediated by the c-fos major coding-region determinant
-
Chang, T. C.; Yamashita, A.; Chen, C. Y.; Yamashita, Y.; Zhu, W.; Durdan, S.; Kahvejian, A.; Sonenberg, N.; Shyu, A. B. UNR, a new partner of poly(A)-binding protein, plays a key role in translationally coupled mRNA turnover mediated by the c-fos major coding-region determinant Genes Dev. 2004, 18 (16) 2010-2023
-
(2004)
Genes Dev.
, vol.18
, Issue.16
, pp. 2010-2023
-
-
Chang, T.C.1
Yamashita, A.2
Chen, C.Y.3
Yamashita, Y.4
Zhu, W.5
Durdan, S.6
Kahvejian, A.7
Sonenberg, N.8
Shyu, A.B.9
-
66
-
-
0032771414
-
SMG-2 is a phosphorylated protein required for mRNA surveillance in Caenorhabditis elegans and related to Upf1p of yeast
-
Page, M. F.; Carr, B.; Anders, K. R.; Grimson, A.; Anderson, P. SMG-2 is a phosphorylated protein required for mRNA surveillance in Caenorhabditis elegans and related to Upf1p of yeast Mol. Cell. Biol. 1999, 19 (9) 5943-5951
-
(1999)
Mol. Cell. Biol.
, vol.19
, Issue.9
, pp. 5943-5951
-
-
Page, M.F.1
Carr, B.2
Anders, K.R.3
Grimson, A.4
Anderson, P.5
|