-
1
-
-
42949098879
-
Death by a thousand cuts: Granzyme pathways of programmed cell death
-
Chowdhury, D., and J. Lieberman. 2008. Death by a thousand cuts: granzyme pathways of programmed cell death. Annu. Rev. Immunol. 26: 389-420.
-
(2008)
Annu. Rev. Immunol.
, vol.26
, pp. 389-420
-
-
Chowdhury, D.1
Lieberman, J.2
-
2
-
-
0029844220
-
Nuclear transport of granzyme B (fragmentin-2) Dependence of perforin in vivo and cytosolic factors in vitro
-
Jans, D. A., P. Jans, L. J. Briggs, V. Sutton, and J. A. Trapani. 1996. Nuclear transport of granzyme B (fragmentin-2). Dependence of perforin in vivo and cytosolic factors in vitro. J. Biol. Chem. 271: 30781-30789.
-
(1996)
J. Biol. Chem.
, vol.271
, pp. 30781-30789
-
-
Jans, D.A.1
Jans, P.2
Briggs, L.J.3
Sutton, V.4
Trapani, J.A.5
-
3
-
-
0031669558
-
Nuclear targeting of the serine protease granzyme A (fragmentin-1)
-
Jans, D. A., L. J. Briggs, P. Jans, C. J. Froelich, G. Parasivam, S. Kumar, V. R. Sutton, and J. A. Trapani. 1998. Nuclear targeting of the serine protease granzyme A (fragmentin-1). J. Cell Sci. 111: 2645-2654.
-
(1998)
J. Cell Sci.
, vol.111
, pp. 2645-2654
-
-
Jans, D.A.1
Briggs, L.J.2
Jans, P.3
Froelich, C.J.4
Parasivam, G.5
Kumar, S.6
Sutton, V.R.7
Trapani, J.A.8
-
4
-
-
84861914243
-
Alterations in RNA processing during immune-mediated programmed cell death
-
Rajani, D. K., M. Walch, D. Martinvalet, M. P. Thomas, and J. Lieberman. 2012. Alterations in RNA processing during immune-mediated programmed cell death. Proc. Natl. Acad. Sci. USA 109: 8688-8693.
-
(2012)
Proc. Natl. Acad. Sci. USA
, vol.109
, pp. 8688-8693
-
-
Rajani, D.K.1
Walch, M.2
Martinvalet, D.3
Thomas, M.P.4
Lieberman, J.5
-
5
-
-
0035793613
-
Induction of rapid histone degradation by the cytotoxic T lymphocyte protease Granzyme A
-
Zhang, D., M. S. Pasternack, P. J. Beresford, L. Wagner, A. H. Greenberg, and J. Lieberman. 2001. Induction of rapid histone degradation by the cytotoxic T lymphocyte protease Granzyme A. J. Biol. Chem. 276: 3683-3690.
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 3683-3690
-
-
Zhang, D.1
Pasternack, M.S.2
Beresford, P.J.3
Wagner, L.4
Greenberg, A.H.5
Lieberman, J.6
-
6
-
-
69849085156
-
The cytotoxic T lymphocyte protease granzyme A cleaves and inactivates poly(adenosine 59-diphosphate-ribose) polymerase-1
-
Zhu, P., D. Martinvalet, D. Chowdhury, D. Zhang, A. Schlesinger, and J. Lieberman. 2009. The cytotoxic T lymphocyte protease granzyme A cleaves and inactivates poly(adenosine 59-diphosphate-ribose) polymerase-1. Blood 114: 1205-1216.
-
(2009)
Blood
, vol.114
, pp. 1205-1216
-
-
Zhu, P.1
Martinvalet, D.2
Chowdhury, D.3
Zhang, D.4
Schlesinger, A.5
Lieberman, J.6
-
7
-
-
84863329244
-
All human granzymes target hnRNP K that is essential for tumor cell viability
-
van Domselaar, R., R. Quadir, A. M. van der Made, R. Broekhuizen, and N. Bovenschen. 2012. All human granzymes target hnRNP K that is essential for tumor cell viability. J. Biol. Chem. 287: 22854-22864.
-
(2012)
J. Biol. Chem.
, vol.287
, pp. 22854-22864
-
-
Van Domselaar, R.1
Quadir, R.2
Made Der Van, A.M.3
Broekhuizen, R.4
Bovenschen, N.5
-
8
-
-
53749095611
-
Noncytotoxic lytic granule-mediated CD8+ T cell inhibition of HSV-1 reactivation from neuronal latency
-
Knickelbein, J. E., K. M. Khanna, M. B. Yee, C. J. Baty, P. R. Kinchington, and R. L. Hendricks. 2008. Noncytotoxic lytic granule-mediated CD8+ T cell inhibition of HSV-1 reactivation from neuronal latency. Science 322: 268-271.
-
(2008)
Science
, vol.322
, pp. 268-271
-
-
Knickelbein, J.E.1
Khanna, K.M.2
Yee, M.B.3
Baty, C.J.4
Kinchington, P.R.5
Hendricks, R.L.6
-
9
-
-
84855275522
-
Granzyme B inhibits vaccinia virus production through proteolytic cleavage of eukaryotic initiation factor 4 gamma 3
-
Marcet-Palacios, M., B. L. Duggan, I. Shostak, M. Barry, T. Geskes, J. A. Wilkins, A. Yanagiya, N. Sonenberg, and R. C. Bleackley. 2011. Granzyme B inhibits vaccinia virus production through proteolytic cleavage of eukaryotic initiation factor 4 gamma 3. PLoS Pathog. 7: e1002447.
-
(2011)
PLoS Pathog.
, vol.7
-
-
Marcet-Palacios, M.1
Duggan, B.L.2
Shostak, I.3
Barry, M.4
Geskes, T.5
Wilkins, J.A.6
Yanagiya, A.7
Sonenberg, N.8
Bleackley, R.C.9
-
10
-
-
0034470147
-
Sequence determinants of function and evolution in serine proteases
-
Krem, M. M., T. Rose, and E. Di Cera. 2000. Sequence determinants of function and evolution in serine proteases. Trends Cardiovasc. Med. 10: 171-176.
-
(2000)
Trends Cardiovasc. Med.
, vol.10
, pp. 171-176
-
-
Krem, M.M.1
Rose, T.2
Di Cera, E.3
-
11
-
-
84866360345
-
Neutrophil extracellular traps: Is immunity the second function of chromatin?
-
Brinkmann, V., and A. Zychlinsky. 2012. Neutrophil extracellular traps: is immunity the second function of chromatin? J. Cell Biol. 198: 773-783.
-
(2012)
J. Cell Biol.
, vol.198
, pp. 773-783
-
-
Brinkmann, V.1
Zychlinsky, A.2
-
12
-
-
78049496216
-
Neutrophil elastase and myeloperoxidase regulate the formation of neutrophil extracellular traps
-
Papayannopoulos, V., K. D. Metzler, A. Hakkim, and A. Zychlinsky. 2010. Neutrophil elastase and myeloperoxidase regulate the formation of neutrophil extracellular traps. J. Cell Biol. 191: 677-691.
-
(2010)
J. Cell Biol.
, vol.191
, pp. 677-691
-
-
Papayannopoulos, V.1
Metzler, K.D.2
Hakkim, A.3
Zychlinsky, A.4
-
13
-
-
73649099522
-
Neutrophil extracellular traps contain calprotectin, a cytosolic protein complex involved in host defense against Candida albicans
-
Urban, C. F., D. Ermert, M. Schmid, U. Abu-Abed, C. Goosmann, W. Nacken, V. Brinkmann, P. R. Jungblut, and A. Zychlinsky. 2009. Neutrophil extracellular traps contain calprotectin, a cytosolic protein complex involved in host defense against Candida albicans. PLoS Pathog. 5: e1000639.
-
(2009)
PLoS Pathog.
, vol.5
-
-
Urban, C.F.1
Ermert, D.2
Schmid, M.3
Abu-Abed, U.4
Goosmann, C.5
Nacken, W.6
Brinkmann, V.7
Jungblut, P.R.8
Zychlinsky, A.9
-
14
-
-
77951688913
-
Isolation of cytotoxic T cell and N K granules and purification of their effector proteins
-
John Wiley & Sons, New York
-
Thiery, J., M. Walch, D. K. Jensen, D. Martinvalet, and J. Lieberman. 2010. Isolation of cytotoxic T cell and NK granules and purification of their effector proteins. In Current Protocols in Cell Biology. John Wiley & Sons, New York, p. 1-29.
-
(2010)
Current Protocols in Cell Biology
, pp. 1-29
-
-
Thiery, J.1
Walch, M.2
Jensen, D.K.3
Martinvalet, D.4
Lieberman, J.5
-
15
-
-
80055113935
-
Neutrophil extracellular traps: How to generate and visualize them
-
Brinkmann, V., B. Laube, U. Abu Abed, C. Goosmann, and A. Zychlinsky. 2010. Neutrophil extracellular traps: how to generate and visualize them. J. Vis. Exp. 36: 1724.
-
(2010)
J. Vis. Exp.
, vol.36
, pp. 1724
-
-
Brinkmann, V.1
Laube, B.2
Abu Abed, U.3
Goosmann, C.4
Zychlinsky, A.5
-
16
-
-
77955964135
-
The substrate specificity profile of human granzyme A
-
Van Damme, P., S. Maurer-Stroh, H. Hao, N. Colaert, E. Timmerman, F. Eisenhaber, J. Vandekerckhove, and K. Gevaert. 2010. The substrate specificity profile of human granzyme A. Biol. Chem. 391: 983-997.
-
(2010)
Biol. Chem.
, vol.391
, pp. 983-997
-
-
Van Damme, P.1
Maurer-Stroh, S.2
Hao, H.3
Colaert, N.4
Timmerman, E.5
Eisenhaber, F.6
Vandekerckhove, J.7
Gevaert, K.8
-
17
-
-
61649102448
-
Analysis of protein processing by N-terminal proteomics reveals novel species-specific substrate determinants of granzyme B orthologs
-
Van Damme, P., S. Maurer-Stroh, K. Plasman, J. Van Durme, N. Colaert, E. Timmerman, P.-J. De Bock, M. Goethals, F. Rousseau, J. Schymkowitz, et al. 2009. Analysis of protein processing by N-terminal proteomics reveals novel species-specific substrate determinants of granzyme B orthologs. Mol. Cell. Proteomics 8: 258-272.
-
(2009)
Mol. Cell. Proteomics
, vol.8
, pp. 258-272
-
-
Van Damme, P.1
Maurer-Stroh, S.2
Plasman, K.3
Van Durme, J.4
Colaert, N.5
Timmerman, E.6
De Bock, P.-J.7
Goethals, M.8
Rousseau, F.9
Schymkowitz, J.10
-
18
-
-
70449477656
-
Next generation software for functional trend analysis
-
Berriz, G. F., J. E. Beaver, C. Cenik, M. Tasan, and F. P. Roth. 2009. Next generation software for functional trend analysis. Bioinformatics 25: 3043-3044.
-
(2009)
Bioinformatics
, vol.25
, pp. 3043-3044
-
-
Berriz, G.F.1
Beaver, J.E.2
Cenik, C.3
Tasan, M.4
Roth, F.P.5
-
19
-
-
58349111875
-
AmiGO: Online access to ontology and annotation data
-
AmiGO Hub; Web Presence Working Group
-
Carbon, S., A. Ireland, C. J. Mungall, S. Shu, B. Marshall, and S. Lewis; AmiGO Hub; Web Presence Working Group. 2009. AmiGO: online access to ontology and annotation data. Bioinformatics 25: 288-289.
-
(2009)
Bioinformatics
, vol.25
, pp. 288-289
-
-
Carbon, S.1
Ireland, A.2
Mungall, C.J.3
Shu, S.4
Marshall, B.5
Lewis, S.6
Hub, A.7
-
20
-
-
84860833500
-
Reorganizing the protein space at the Universal Protein Resource (UniProt)
-
(Database issue)
-
UniProt Consortium. 2012. Reorganizing the protein space at the Universal Protein Resource (UniProt). Nucleic Acids Res. 40(Database issue): D71-D75.
-
(2012)
Nucleic Acids Res.
, vol.40
-
-
Consortium, U.1
-
21
-
-
77954296666
-
A new bioinformatics analysis tools framework at EMBL-EBI
-
(Web Server issue)
-
Goujon, M., H. McWilliam, W. Li, F. Valentin, S. Squizzato, J. Paern, and R. Lopez. 2010. A new bioinformatics analysis tools framework at EMBL-EBI. Nucleic Acids Res. 38(Web Server issue): W695-W699.
-
(2010)
Nucleic Acids Res.
, vol.38
-
-
Goujon, M.1
McWilliam, H.2
Li, W.3
Valentin, F.4
Squizzato, S.5
Paern, J.6
Lopez, R.7
-
22
-
-
84864462812
-
EvolView, an online tool for visualizing, annotating and managing phylogenetic trees
-
(Web Server issue)
-
Zhang, H., S. Gao, M. J. Lercher, S. Hu, and W.-H. Chen. 2012. EvolView, an online tool for visualizing, annotating and managing phylogenetic trees. Nucleic Acids Res. 40(Web Server issue): W569-W572.
-
(2012)
Nucleic Acids Res.
, vol.40
-
-
Zhang, H.1
Gao, S.2
Lercher, M.J.3
Hu, S.4
Chen, W.-H.5
-
23
-
-
4344672685
-
Specificity of the STAR/GSG domain protein Qk1: Implications for the regulation of myelination
-
Ryder, S. P., and J. R. Williamson. 2004. Specificity of the STAR/GSG domain protein Qk1: implications for the regulation of myelination. RNA 10: 1449-1458.
-
(2004)
RNA
, vol.10
, pp. 1449-1458
-
-
Ryder, S.P.1
Williamson, J.R.2
-
24
-
-
77749309273
-
Probing the DNA-binding affinity and specificity of designed zinc finger proteins
-
Jantz, D., and J. M. Berg. 2010. Probing the DNA-binding affinity and specificity of designed zinc finger proteins. Biophys. J. 98: 852-860.
-
(2010)
Biophys. J.
, vol.98
, pp. 852-860
-
-
Jantz, D.1
Berg, J.M.2
-
25
-
-
34547103988
-
Specific protein domains mediate cooperative assembly of HuR oligomers on AU-rich mRNA-destabilizing sequences
-
Fialcowitz-White, E. J., B. Y. Brewer, J. D. Ballin, C. D. Willis, E. A. Toth, and G. M. Wilson. 2007. Specific protein domains mediate cooperative assembly of HuR oligomers on AU-rich mRNA-destabilizing sequences. J. Biol. Chem. 282: 20948-20959.
-
(2007)
J. Biol. Chem.
, vol.282
, pp. 20948-20959
-
-
Fialcowitz-White, E.J.1
Brewer, B.Y.2
Ballin, J.D.3
Willis, C.D.4
Toth, E.A.5
Wilson, G.M.6
-
26
-
-
0034086060
-
HuD RNA recognition motifs play distinct roles in the formation of a stable complex with AU-rich RNA
-
Park, S., D. G. Myszka, M. Yu, S. J. Littler, and I. A. Laird-Offringa. 2000. HuD RNA recognition motifs play distinct roles in the formation of a stable complex with AU-rich RNA. Mol. Cell. Biol. 20: 4765-4772.
-
(2000)
Mol. Cell. Biol.
, vol.20
, pp. 4765-4772
-
-
Park, S.1
Myszka, D.G.2
Yu, M.3
Littler, S.J.4
Laird-Offringa, I.A.5
-
27
-
-
0029862983
-
A single high affinity binding site for histone H1 in a nucleosome containing the Xenopus borealis 5 S ribosomal RNA gene
-
Nightingale, K. P., D. Pruss, and A. P. Wolffe. 1996. A single high affinity binding site for histone H1 in a nucleosome containing the Xenopus borealis 5 S ribosomal RNA gene. J. Biol. Chem. 271: 7090-7094.
-
(1996)
J. Biol. Chem.
, vol.271
, pp. 7090-7094
-
-
Nightingale, K.P.1
Pruss, D.2
Wolffe, A.P.3
-
28
-
-
84859950056
-
NSP4, an elastase-related protease in human neutrophils with arginine specificity
-
Perera, N. C., O. Schilling, H. Kittel, W. Back, E. Kremmer, and D. E. Jenne. 2012. NSP4, an elastase-related protease in human neutrophils with arginine specificity. Proc. Natl. Acad. Sci. USA 109: 6229-6234.
-
(2012)
Proc. Natl. Acad. Sci. USA
, vol.109
, pp. 6229-6234
-
-
Perera, N.C.1
Schilling, O.2
Kittel, H.3
Back, W.4
Kremmer, E.5
Jenne, D.E.6
-
29
-
-
0028964376
-
DNA binds neutrophil elastase and mucus proteinase inhibitor and impairs their functional activity
-
Belorgey, D., and J. G. Bieth. 1995. DNA binds neutrophil elastase and mucus proteinase inhibitor and impairs their functional activity. FEBS Lett. 361: 265-268.
-
(1995)
FEBS Lett.
, vol.361
, pp. 265-268
-
-
Belorgey, D.1
Bieth, J.G.2
-
30
-
-
0018661632
-
Human leucocyte elastase and cathepsin G: Structural and functional characteristics
-
Travis, J., P. J. Giles, L. Porcelli, C. F. Reilly, R. Baugh, and J. Powers. 1979. Human leucocyte elastase and cathepsin G: structural and functional characteristics. Ciba Found. Symp. 75: 51-68.
-
(1979)
Ciba Found. Symp.
, vol.75
, pp. 51-68
-
-
Travis, J.1
Giles, P.J.2
Porcelli, L.3
Reilly, C.F.4
Baugh, R.5
Powers, J.6
-
31
-
-
0010586561
-
Pancreatic elastase: Purification, properties, and function
-
Brink, N. G., U. J. Lewis, and D. E. Williams. 1956. Pancreatic elastase: purification, properties, and function. J. Biol. Chem. 222: 705-720.
-
(1956)
J. Biol. Chem.
, vol.222
, pp. 705-720
-
-
Brink, N.G.1
Lewis, U.J.2
Williams, D.E.3
-
32
-
-
0016692253
-
Physical parameters and chemical composition of porcine pancreatic elastase II
-
Ardelt, W. 1975. Physical parameters and chemical composition of porcine pancreatic elastase II. Biochim. Biophys. Acta 393: 267-273.
-
(1975)
Biochim. Biophys. Acta
, vol.393
, pp. 267-273
-
-
Ardelt, W.1
-
33
-
-
0021814817
-
The identification of neotrypsinogens in samples of bovine trypsinogen
-
Higaki, J. N., and A. Light. 1985. The identification of neotrypsinogens in samples of bovine trypsinogen. Anal. Biochem. 148: 111-120.
-
(1985)
Anal. Biochem.
, vol.148
, pp. 111-120
-
-
Higaki, J.N.1
Light, A.2
-
34
-
-
50949129815
-
Classifying RNA-binding proteins based on electrostatic properties
-
Shazman, S., and Y. Mandel-Gutfreund. 2008. Classifying RNA-binding proteins based on electrostatic properties. PLOS Comput. Biol. 4: e1000146.
-
(2008)
PLOS Comput. Biol.
, vol.4
-
-
Shazman, S.1
Mandel-Gutfreund, Y.2
-
35
-
-
0034488761
-
Crystal structure of the caspase activator human granzyme B, a proteinase highly specific for an Asp-P1 residue
-
Estébanez-Perpiña, E., P. Fuentes-Prior, D. Belorgey, M. Braun, R. Kiefersauer, K. Maskos, R. Huber, H. Rubin, and W. Bode. 2000. Crystal structure of the caspase activator human granzyme B, a proteinase highly specific for an Asp-P1 residue. Biol. Chem. 381: 1203-1214.
-
(2000)
Biol. Chem.
, vol.381
, pp. 1203-1214
-
-
Estébanez-Perpiña, E.1
Fuentes-Prior, P.2
Belorgey, D.3
Braun, M.4
Kiefersauer, R.5
Maskos, K.6
Huber, R.7
Rubin, H.8
Bode, W.9
-
36
-
-
0038730744
-
Crystal structure of the apoptosis-inducing human granzyme A dimer
-
Hink-Schauer, C., E. Estébanez-Perpiñá, F. C. Kurschus, W. Bode, and D. E. Jenne. 2003. Crystal structure of the apoptosis-inducing human granzyme A dimer. Nat. Struct. Biol. 10: 535-540.
-
(2003)
Nat. Struct. Biol.
, vol.10
, pp. 535-540
-
-
Hink-Schauer, C.1
Estébanez-Perpiñá, E.2
Kurschus, F.C.3
Bode, W.4
Jenne, D.E.5
-
37
-
-
42449101298
-
Serglycin - Structure and biology
-
Kolset, S. O., and H. Tveit. 2008. Serglycin - structure and biology. Cell. Mol. Life Sci. 65: 1073-1085.
-
(2008)
Cell. Mol. Life Sci.
, vol.65
, pp. 1073-1085
-
-
Kolset, S.O.1
Tveit, H.2
-
38
-
-
20144380101
-
A novel mechanism for protein delivery: Granzyme B undergoes electrostatic exchange from serglycin to target cells
-
Raja, S. M., S. S. Metkar, S. Höning, B. Wang, W. A. Russin, N. H. Pipalia, C. Menaa, M. Belting, X. Cao, R. Dressel, and C. J. Froelich. 2005. A novel mechanism for protein delivery: granzyme B undergoes electrostatic exchange from serglycin to target cells. J. Biol. Chem. 280: 20752-20761.
-
(2005)
J. Biol. Chem.
, vol.280
, pp. 20752-20761
-
-
Raja, S.M.1
Metkar, S.S.2
Höning, S.3
Wang, B.4
Russin, W.A.5
Pipalia, N.H.6
Menaa, C.7
Belting, M.8
Cao, X.9
Dressel, R.10
Froelich, C.J.11
-
39
-
-
0034640218
-
Effect of DNase on the activity of neutrophil elastase, cathepsin G and proteinase 3 in the presence of DNA
-
Duranton, J., D. Belorgey, J. Carrère, L. Donato, T. Moritz, and J. G. Bieth. 2000. Effect of DNase on the activity of neutrophil elastase, cathepsin G and proteinase 3 in the presence of DNA. FEBS Lett. 473: 154-156.
-
(2000)
FEBS Lett.
, vol.473
, pp. 154-156
-
-
Duranton, J.1
Belorgey, D.2
Carrère, J.3
Donato, L.4
Moritz, T.5
Bieth, J.G.6
|