메뉴 건너뛰기




Volumn 2014, Issue 3, 2014, Pages

An allosteric Sec61 inhibitor traps nascent transmembrane helices at the lateral gate

Author keywords

[No Author keywords available]

Indexed keywords

TUMOR NECROSIS FACTOR ALPHA ANTIBODY; COTRANSIN; CROSS LINKING REAGENT; CYCLOPEPTIDE; MEMBRANE PROTEIN; PROTEIN BINDING; SEC61A1 PROTEIN, HUMAN; SEC61G PROTEIN, HUMAN; TUMOR NECROSIS FACTOR ALPHA;

EID: 84898761276     PISSN: None     EISSN: 2050084X     Source Type: Journal    
DOI: 10.7554/eLife.01483     Document Type: Article
Times cited : (66)

References (51)
  • 1
    • 84878941023 scopus 로고    scopus 로고
    • Signal recognition particle: An essential protein-targeting machine
    • doi: 10.1146/annurev-biochem-072711-164732
    • Akopian D, Shen K, Zhang X, Shan S-O. 2013. Signal recognition particle: an essential protein-targeting machine. Annual Review of Biochemistry 82:693-721. doi: 10.1146/annurev-biochem-072711-164732.
    • (2013) Annual Review of Biochemistry , vol.82 , pp. 693-721
    • Akopian, D.1    Shen, K.2    Zhang, X.3    Shan, S.-O.4
  • 3
    • 0035937403 scopus 로고    scopus 로고
    • Structural mechanism for rifampicin inhibition of bacterial RNA polymerase
    • doi: 10.1016/S0092-8674(01)00286-0
    • Campbell EA, Korzheva N, Mustaev A, Murakami K, Nair S, Goldfarb A, Darst SA. 2001. Structural mechanism for rifampicin inhibition of bacterial RNA polymerase. Cell 104:901-912. doi: 10.1016/S0092-8674(01)00286-0.
    • (2001) Cell , vol.104 , pp. 901-912
    • Campbell, E.A.1    Korzheva, N.2    Mustaev, A.3    Murakami, K.4    Nair, S.5    Goldfarb, A.6    Darst, S.A.7
  • 4
    • 33749518904 scopus 로고    scopus 로고
    • Slow translocon gating causes cytosolic exposure of transmembrane and lumenal domains during membrane protein integration
    • doi: 10.1038/nsmb1146
    • Cheng Z, Gilmore R. 2006. Slow translocon gating causes cytosolic exposure of transmembrane and lumenal domains during membrane protein integration. Nature Structural & Molecular Biology 13:930-936. doi: 10.1038/nsmb1146.
    • (2006) Nature Structural & Molecular Biology , vol.13 , pp. 930-936
    • Cheng, Z.1    Gilmore, R.2
  • 5
    • 79959961077 scopus 로고    scopus 로고
    • Stepwise insertion and inversion of a type II signal anchor sequence in the ribosome-Sec61 translocon complex
    • doi: 10.1016/j.cell.2011.06.004
    • Devaraneni PK, Conti B, Matsumura Y, Yang Z, Johnson AE, Skach WR. 2011. Stepwise insertion and inversion of a type II signal anchor sequence in the ribosome-Sec61 translocon complex. Cell 146:134-147. doi: 10.1016/j.cell.2011.06.004.
    • (2011) Cell , vol.146 , pp. 134-147
    • Devaraneni, P.K.1    Conti, B.2    Matsumura, Y.3    Yang, Z.4    Johnson, A.E.5    Skach, W.R.6
  • 6
    • 0342995731 scopus 로고    scopus 로고
    • The cotranslational integration of membrane proteins into the phospholipid bilayer is a multistep process
    • doi: 10.1016/S0092-8674(00)81115-0
    • Do H, Falcone D, Lin J, Andrews DW, Johnson AE. 1996. The cotranslational integration of membrane proteins into the phospholipid bilayer is a multistep process. Cell 85:369-378. doi: 10.1016/S0092-8674(00)81115-0.
    • (1996) Cell , vol.85 , pp. 369-378
    • Do, H.1    Falcone, D.2    Lin, J.3    Andrews, D.W.4    Johnson, A.E.5
  • 8
    • 78049253482 scopus 로고    scopus 로고
    • Lateral opening of a translocon upon entry of protein suggests the mechanism of insertion into membranes
    • doi: 10.1073/pnas.1012556107
    • Egea PF, Stroud RM. 2010. Lateral opening of a translocon upon entry of protein suggests the mechanism of insertion into membranes. Proceedings of the National Academy of Sciences of the United States of America 107:17182-17187. doi: 10.1073/pnas.1012556107.
    • (2010) Proceedings of the National Academy of Sciences of the United States of America , vol.107 , pp. 17182-17187
    • Egea, P.F.1    Stroud, R.M.2
  • 9
    • 67650144829 scopus 로고    scopus 로고
    • Lanthanum ions inhibit the mammalian Sec61 complex in its channel dynamics and protein transport activity
    • doi: 10.1016/j.febslet.2009.06.032
    • Erdmann F, Jung M, Eyrisch S, Lang S, Helms V, Wagner R, Zimmermann R. 2009. Lanthanum ions inhibit the mammalian Sec61 complex in its channel dynamics and protein transport activity. FEBS Letters 583:2359-2364. doi: 10.1016/j.febslet.2009.06.032.
    • (2009) FEBS Letters , vol.583 , pp. 2359-2364
    • Erdmann, F.1    Jung, M.2    Eyrisch, S.3    Lang, S.4    Helms, V.5    Wagner, R.6    Zimmermann, R.7
  • 12
    • 0037450802 scopus 로고    scopus 로고
    • Substrate-specific function of the translocon-associated protein complex during translocation across the ER membrane
    • doi: 10.1083/jcb.200210095
    • Fons RD, Bogert BA, Hegde RS. 2003. Substrate-specific function of the translocon-associated protein complex during translocation across the ER membrane. The Journal of Cell Biology 160:529-539. doi: 10.1083/jcb.200210095.
    • (2003) The Journal of Cell Biology , vol.160 , pp. 529-539
    • Fons, R.D.1    Bogert, B.A.2    Hegde, R.S.3
  • 13
    • 22444450987 scopus 로고    scopus 로고
    • A substrate-specific inhibitor of protein translocation into the endoplasmic reticulum
    • doi: 10.1038/nature03821
    • Garrison JL, Kunkel EJ, Hegde RS, Taunton J. 2005. A substrate-specific inhibitor of protein translocation into the endoplasmic reticulum. Nature 436:285-289. doi: 10.1038/nature03821.
    • (2005) Nature , vol.436 , pp. 285-289
    • Garrison, J.L.1    Kunkel, E.J.2    Hegde, R.S.3    Taunton, J.4
  • 14
    • 0026038363 scopus 로고
    • Transcription of full-length and truncated mRNA transcripts to study protein translocation across the endoplasmic reticulum
    • doi: 10.1016/S0091-679X(08)61683-0
    • Gilmore R, Collins P, Johnson J, Kellaris K, Rapiejko P. 1991. Transcription of full-length and truncated mRNA transcripts to study protein translocation across the endoplasmic reticulum. Methods in Cell Biology 34:223-239. doi: 10.1016/S0091-679X(08)61683-0.
    • (1991) Methods in Cell Biology , vol.34 , pp. 223-239
    • Gilmore, R.1    Collins, P.2    Johnson, J.3    Kellaris, K.4    Rapiejko, P.5
  • 15
    • 1542313960 scopus 로고    scopus 로고
    • Sec61p contributes to signal sequence orientation according to the positive-inside rule
    • doi: 10.1091/mbc.E03-08-0599
    • Goder V, Junne T, Spiess M. 2004. Sec61p contributes to signal sequence orientation according to the positive-inside rule. Molecular Biology of the Cell 15:1470-1478. doi: 10.1091/mbc.E03-08-0599.
    • (2004) Molecular Biology of the Cell , vol.15 , pp. 1470-1478
    • Goder, V.1    Junne, T.2    Spiess, M.3
  • 16
    • 33750081430 scopus 로고    scopus 로고
    • The translocation inhibitor CAM741 interferes with vascular cell adhesion molecule 1 signal peptide insertion at the translocon
    • doi: 10.1074/jbc.M607243200
    • Harant H, Lettner N, Hofer L, Oberhauser B, de Vries JE, Lindley IJ. 2006. The translocation inhibitor CAM741 interferes with vascular cell adhesion molecule 1 signal peptide insertion at the translocon. The Journal of Cell Biology 281:30492-30502. doi: 10.1074/jbc.M607243200.
    • (2006) The Journal of Cell Biology , vol.281 , pp. 30492-30502
    • Harant, H.1    Lettner, N.2    Hofer, L.3    Oberhauser, B.4    de Vries, J.E.5    Lindley, I.J.6
  • 18
    • 0034697967 scopus 로고    scopus 로고
    • The Sec61p complex mediates the integration of a membrane protein by allowing lipid partitioning of the transmembrane domain
    • doi: 10.1016/S0092-8674(00)00028-3
    • Heinrich SU, Mothes W, Brunner J, Rapoport TA. 2000. The Sec61p complex mediates the integration of a membrane protein by allowing lipid partitioning of the transmembrane domain. Cell 102:233-244. doi: 10.1016/S0092-8674(00)00028-3.
    • (2000) Cell , vol.102 , pp. 233-244
    • Heinrich, S.U.1    Mothes, W.2    Brunner, J.3    Rapoport, T.A.4
  • 19
    • 79959416870 scopus 로고    scopus 로고
    • Irreversible Nek2 kinase inhibitors with cellular activity
    • doi: 10.1021/jm200222m
    • Henise JC, Taunton J. 2011. Irreversible Nek2 kinase inhibitors with cellular activity. Journal of Medicinal Chemistry 54:4133-4146. doi: 10.1021/jm200222m.
    • (2011) Journal of Medicinal Chemistry , vol.54 , pp. 4133-4146
    • Henise, J.C.1    Taunton, J.2
  • 23
    • 84869090494 scopus 로고    scopus 로고
    • Membrane protein TM segments are retained at the translocon during integration until the nascent chain cues FRET-detected release into bulk lipid
    • doi: 10.1016/j.molcel.2012.08.023
    • Hou B, Lin P-J, Johnson AE. 2012. Membrane protein TM segments are retained at the translocon during integration until the nascent chain cues FRET-detected release into bulk lipid. Molecular Cell 48:398-408. doi: 10.1016/j.molcel.2012.08.023.
    • (2012) Molecular Cell , vol.48 , pp. 398-408
    • Hou, B.1    Lin, P.-J.2    Johnson, A.E.3
  • 24
    • 84867218476 scopus 로고    scopus 로고
    • A biphasic pulling force acts on transmembrane helices during translocon-mediated membrane integration
    • doi: 10.1038/nsmb.2376
    • Ismail NN, Hedman RR, Schiller NN, von Heijne G. 2012. A biphasic pulling force acts on transmembrane helices during translocon-mediated membrane integration. Nature Structural & Molecular Biology 19:1018-1022. doi: 10.1038/nsmb.2376.
    • (2012) Nature Structural & Molecular Biology , vol.19 , pp. 1018-1022
    • Ismail, N.N.1    Hedman, R.R.2    Schiller, N.N.3    von Heijne, G.4
  • 25
    • 77952378779 scopus 로고    scopus 로고
    • The hydrophobic core of the Sec61 translocon defines the hydrophobicity threshold for membrane integration
    • doi: 10.1091/mbc.E10-01-0060
    • Junne T, Kocik L, Spiess M. 2010. The hydrophobic core of the Sec61 translocon defines the hydrophobicity threshold for membrane integration. Molecular Biology of the Cell 21:1662-1670. doi: 10.1091/mbc.E10-01-0060.
    • (2010) Molecular Biology of the Cell , vol.21 , pp. 1662-1670
    • Junne, T.1    Kocik, L.2    Spiess, M.3
  • 26
    • 0031781639 scopus 로고    scopus 로고
    • The beta subunit of the Sec61 complex facilitates cotranslational protein transport and interacts with the signal peptidase during translocation
    • doi: 10.1083/jcb.141.4.887
    • Kalies KU, Rapoport TA, Hartmann E. 1998. The beta subunit of the Sec61 complex facilitates cotranslational protein transport and interacts with the signal peptidase during translocation. The Journal of Cell Biology 141:887-894. doi: 10.1083/jcb.141.4.887.
    • (1998) The Journal of Cell Biology , vol.141 , pp. 887-894
    • Kalies, K.U.1    Rapoport, T.A.2    Hartmann, E.3
  • 28
    • 36749047362 scopus 로고    scopus 로고
    • Photo-leucine incorporation reveals the target of a cyclodepsipeptide inhibitor of cotranslational translocation
    • doi: 10.1021/ja076250y
    • MacKinnon AL, Garrison JL, Hegde RS, Taunton J. 2007. Photo-leucine incorporation reveals the target of a cyclodepsipeptide inhibitor of cotranslational translocation. Journal of American Chemical Society 129:14560-14561. doi: 10.1021/ja076250y.
    • (2007) Journal of American Chemical Society , vol.129 , pp. 14560-14561
    • McKinnon, A.L.1    Garrison, J.L.2    Hegde, R.S.3    Taunton, J.4
  • 29
    • 84873598090 scopus 로고    scopus 로고
    • Target Identification by diazirine photo-Cross-Linking and click chemistry
    • Hoboken, NJ, USA: John Wiley & Sons, Inc. doi: 10.1002/9780470559277.ch090167
    • MacKinnon AL, Taunton J. 2009. Target Identification by diazirine photo-Cross-Linking and click chemistry. Current Protocols in Chemical Biology 1:55-73. Hoboken, NJ, USA: John Wiley & Sons, Inc. doi: 10.1002/9780470559277.ch090167.
    • (2009) Current Protocols in Chemical Biology , vol.1 , pp. 55-73
    • McKinnon, A.L.1    Taunton, J.2
  • 30
    • 80053143374 scopus 로고    scopus 로고
    • Secretory protein profiling reveals TNF-alpha inactivation by selective and promiscuous Sec61 modulators
    • doi: 10.1016/j.chembiol.2011.06.015
    • Maifeld SV, MacKinnon AL, Garrison JL, Sharma A, Kunkel EJ, Hegde RS, Taunton J. 2011. Secretory protein profiling reveals TNF-alpha inactivation by selective and promiscuous Sec61 modulators. Chemistry & Biology 18:1082-1088. doi: 10.1016/j.chembiol.2011.06.015.
    • (2011) Chemistry & Biology , vol.18 , pp. 1082-1088
    • Maifeld, S.V.1    McKinnon, A.L.2    Garrison, J.L.3    Sharma, A.4    Kunkel, E.J.5    Hegde, R.S.6    Taunton, J.7
  • 31
    • 0029002962 scopus 로고
    • The protein-conducting channel in the membrane of the endoplasmic reticulum is open laterally toward the lipid bilayer
    • doi: 10.1016/0092-8674(95)90330-5
    • Martoglio B, Hofmann MW, Brunner J, Dobberstein B. 1995. The protein-conducting channel in the membrane of the endoplasmic reticulum is open laterally toward the lipid bilayer. Cell 81:207-214. doi: 10.1016/0092-8674(95)90330-5.
    • (1995) Cell , vol.81 , pp. 207-214
    • Martoglio, B.1    Hofmann, M.W.2    Brunner, J.3    Dobberstein, B.4
  • 32
    • 0141992130 scopus 로고    scopus 로고
    • Cotranslational protein integration into the ER membrane is mediated by the binding of nascent chains to translocon proteins
    • doi: 10.1016/S1097-2765(03)00304-6
    • McCormick PJ, Miao Y, Shao Y, Lin J, Johnson AE. 2003. Cotranslational protein integration into the ER membrane is mediated by the binding of nascent chains to translocon proteins. Molecular Cell 12:329-341. doi: 10.1016/S1097-2765(03)00304-6.
    • (2003) Molecular Cell , vol.12 , pp. 329-341
    • McCormick, P.J.1    Miao, Y.2    Shao, Y.3    Lin, J.4    Johnson, A.E.5
  • 33
    • 0030825974 scopus 로고    scopus 로고
    • Molecular mechanism of membrane protein integration into the endoplasmic reticulum
    • doi: 10.1016/S0092-8674(00)80234-2
    • Mothes W, Heinrich SU, Graf R, Nilsson I, von Heijne G, Brunner J, Rapoport TA. 1997. Molecular mechanism of membrane protein integration into the endoplasmic reticulum. Cell 89:523-533. doi: 10.1016/S0092-8674(00)80234-2.
    • (1997) Cell , vol.89 , pp. 523-533
    • Mothes, W.1    Heinrich, S.U.2    Graf, R.3    Nilsson, I.4    von Heijne, G.5    Brunner, J.6    Rapoport, T.A.7
  • 36
    • 0032544614 scopus 로고    scopus 로고
    • Signal sequence recognition in posttranslational protein transport across the yeast ER membrane
    • doi: 10.1016/S0092-8674(00)81738-9
    • Plath K, Mothes W, Wilkinson BM, Stirling CJ, Rapoport TA. 1998. Signal sequence recognition in posttranslational protein transport across the yeast ER membrane. Cell 94:795-807. doi: 10.1016/S0092-8674(00)81738-9.
    • (1998) Cell , vol.94 , pp. 795-807
    • Plath, K.1    Mothes, W.2    Wilkinson, B.M.3    Stirling, C.J.4    Rapoport, T.A.5
  • 37
    • 27144549973 scopus 로고    scopus 로고
    • Sequential triage of transmembrane segments by Sec61alpha during biogenesis of a native multispanning membrane protein
    • doi: 10.1038/nsmb994
    • Sadlish H, Pitonzo D, Johnson AE, Skach WR. 2005. Sequential triage of transmembrane segments by Sec61alpha during biogenesis of a native multispanning membrane protein. Nature Structure & Molecular Biology 12:870-878. doi: 10.1038/nsmb994.
    • (2005) Nature Structure & Molecular Biology , vol.12 , pp. 870-878
    • Sadlish, H.1    Pitonzo, D.2    Johnson, A.E.3    Skach, W.R.4
  • 38
    • 0001686739 scopus 로고    scopus 로고
    • Multiple BCR-ABL kinase domain mutations confer polyclonal resistance to the tyrosine kinase inhibitor imatinib (STI571) in chronic phase and blast crisis chronic myeloid leukemia
    • doi: 10.1016/S1535-6108(02)00096-X
    • Shah NP, Nicoll JM, Nagar B, Gorre ME, Paquette RL, Kuriyan J, Sawyers CL. 2002. Multiple BCR-ABL kinase domain mutations confer polyclonal resistance to the tyrosine kinase inhibitor imatinib (STI571) in chronic phase and blast crisis chronic myeloid leukemia. Cancer Cell 2:117-125. doi: 10.1016/S1535-6108(02)00096-X.
    • (2002) Cancer Cell , vol.2 , pp. 117-125
    • Shah, N.P.1    Nicoll, J.M.2    Nagar, B.3    Gorre, M.E.4    Paquette, R.L.5    Kuriyan, J.6    Sawyers, C.L.7
  • 39
    • 80054041334 scopus 로고    scopus 로고
    • Membrane protein insertion at the endoplasmic reticulum
    • doi: 10.1146/annurev-cellbio-092910-154125
    • Shao S, Hegde RS. 2011. Membrane protein insertion at the endoplasmic reticulum. Annual Review of Cell and Developmental Biology 27:25-56. doi: 10.1146/annurev-cellbio-092910-154125.
    • (2011) Annual Review of Cell and Developmental Biology , vol.27 , pp. 25-56
    • Shao, S.1    Hegde, R.S.2
  • 40
    • 77954691102 scopus 로고    scopus 로고
    • In vitro dissection of protein translocation into the mammalian endoplasmic reticulum
    • doi: 10.1007/978-1-60327-412-8_20
    • Sharma A, Mariappan M, Appathurai S, Hegde RS. 2010. In vitro dissection of protein translocation into the mammalian endoplasmic reticulum. Methods in Molecular Biology 619:339-363. doi: 10.1007/978-1-60327-412-8_20.
    • (2010) Methods in Molecular Biology , vol.619 , pp. 339-363
    • Sharma, A.1    Mariappan, M.2    Appathurai, S.3    Hegde, R.S.4
  • 41
    • 80052237952 scopus 로고    scopus 로고
    • Translocation channel gating kinetics balances protein translocation efficiency with signal sequence recognition fidelity
    • doi: 10.1091/mbc.E11-01-0070
    • Trueman SF, Mandon EC, Gilmore R. 2011. Translocation channel gating kinetics balances protein translocation efficiency with signal sequence recognition fidelity. Molecular Biology of the Cell 22:2983-2993. doi: 10.1091/mbc.E11-01-0070.
    • (2011) Molecular Biology of the Cell , vol.22 , pp. 2983-2993
    • Trueman, S.F.1    Mandon, E.C.2    Gilmore, R.3
  • 42
    • 84872016140 scopus 로고    scopus 로고
    • A gating motif in the translocation channel sets the hydrophobicity threshold for signal sequence function
    • doi: 10.1083/jcb.201207163
    • Trueman SF, Mandon EC, Gilmore R. 2012. A gating motif in the translocation channel sets the hydrophobicity threshold for signal sequence function. Journal of Cell Biology 199:907-918. doi: 10.1083/jcb.201207163.
    • (2012) Journal of Cell Biology , vol.199 , pp. 907-918
    • Trueman, S.F.1    Mandon, E.C.2    Gilmore, R.3
  • 46
    • 84857190127 scopus 로고    scopus 로고
    • Using transcriptome sequencing to identify mechanisms of drug action and resistance
    • doi: 10.1038/nchembio.779
    • Wacker SA, Houghtaling BR, Elemento O, Kapoor TM. 2012. Using transcriptome sequencing to identify mechanisms of drug action and resistance. Nature Chemical Biology 8:235-237. doi: 10.1038/nchembio.779.
    • (2012) Nature Chemical Biology , vol.8 , pp. 235-237
    • Wacker, S.A.1    Houghtaling, B.R.2    Elemento, O.3    Kapoor, T.M.4
  • 47
    • 5444259691 scopus 로고    scopus 로고
    • Demonstration of a specific Escherichia coli SecY-signal peptide interaction
    • doi: 10.1021/bi049485k
    • Wang L, Miller A, Rusch SL, Kendall DA. 2004. Demonstration of a specific Escherichia coli SecY-signal peptide interaction. Biochemistry 43:13185-13192. doi: 10.1021/bi049485k.
    • (2004) Biochemistry , vol.43 , pp. 13185-13192
    • Wang, L.1    Miller, A.2    Rusch, S.L.3    Kendall, D.A.4
  • 48
    • 0020994721 scopus 로고
    • Preparation of microsomal membranes for cotranslational protein translocation
    • doi: 10.1016/S0076-6879(83)96010-X
    • Walter P, Blobel G. 1983. Preparation of microsomal membranes for cotranslational protein translocation. Methods in Enzymology 96:84-93. doi: 10.1016/S0076-6879(83)96010-X.
    • (1983) Methods in Enzymology , vol.96 , pp. 84-93
    • Walter, P.1    Blobel, G.2
  • 50
    • 84865443871 scopus 로고    scopus 로고
    • Direct simulation of early-stage Sec-facilitated protein translocation
    • doi: 10.1021/ja3034526
    • Zhang B, Miller TF. 2012. Direct simulation of early-stage Sec-facilitated protein translocation. Journal of the American Chemical Society 134:13700-13707. doi: 10.1021/ja3034526.
    • (2012) Journal of the American Chemical Society , vol.134 , pp. 13700-13707
    • Zhang, B.1    Miller, T.F.2
  • 51
    • 54049111011 scopus 로고    scopus 로고
    • Structure of a complex of the ATPase SecA and the protein-translocation channel
    • doi: 10.1038/nature07335
    • Zimmer J, Nam Y, Rapoport TA. 2008. Structure of a complex of the ATPase SecA and the protein-translocation channel. Nature 455:936-943. doi: 10.1038/nature07335.
    • (2008) Nature , vol.455 , pp. 936-943
    • Zimmer, J.1    Nam, Y.2    Rapoport, T.A.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.