-
1
-
-
33847178786
-
Colorectal cancer screening among men and women in the United States
-
Peterson NB, Murff HJ, Ness RM, Dittus RS. Colorectal cancer screening among men and women in the United States. J. Womens Health 16, 57-65 (2007).
-
(2007)
J. Womens Health
, vol.16
, pp. 57-65
-
-
Peterson, N.B.1
Murff, H.J.2
Ness, R.M.3
Dittus, R.S.4
-
3
-
-
14644396630
-
Colorectal cancer screening: Prospects for molecular stool analysis
-
Davies RJ, Miller R, Coleman N. Colorectal cancer screening: prospects for molecular stool analysis. Nature Rev. Cancer 5, 199-209 (2005).
-
(2005)
Nature Rev. Cancer
, vol.5
, pp. 199-209
-
-
Davies, R.J.1
Miller, R.2
Coleman, N.3
-
4
-
-
58849114609
-
Cancer Screening in the United States, 2009. A Review of Current American Cancer Society Guidelines and Issues in Cancer Screening
-
Smith RA, Cokkinides V, Brawley OW. Cancer screening in the United States, 2009. A review of current American Cancer Society Guidelines and issues in cancer screening. CA Cancer J. Clin. 59, 27-41 (2002).
-
(2002)
CA Cancer J. Clin.
, Issue.59
, pp. 27-41
-
-
Smith, R.A.1
Cokkinides, V.2
Brawley, O.W.3
-
5
-
-
0345708286
-
Colon cancer: Prevalence, screening, gene expression and mutation, and risk factors and assessment
-
Ahmed FE. Colon cancer: prevalence, screening, gene expression and mutation, and risk factors and assessment. J. Env. Sci. Health C Environ. Carcinog. Ecotoxicol. Rev. 21(2), 65-131 (2003).
-
(2003)
J. Env. Sci. Health C Environ. Carcinog. Ecotoxicol. Rev
, vol.21
, Issue.2
, pp. 65-131
-
-
Ahmed, F.E.1
-
6
-
-
0037240630
-
Quantification of human intestinal gene expression profiling using exfoliated colonocytes: A pilot study
-
Davidson LA, Lupton JR, Miskovsky E et al. Quantification of human intestinal gene expression profiling using exfoliated colonocytes: a pilot study. Biomarkers 8, 51-61 (2003).
-
(2003)
Biomarkers
, vol.8
, pp. 51-61
-
-
Davidson, L.A.1
Lupton, J.R.2
Miskovsky, E.3
-
7
-
-
74949113627
-
Diagnostic microRNA markers for screening sporadic human colon cancer and ulcerative colitis in stool and tissue
-
Ahmed FE, Jeffries CD, Vos PW et al. Diagnostic microRNA markers for screening sporadic human colon cancer and ulcerative colitis in stool and tissue. Cancer Genomics Proteomics 6, 281-296 (2009).
-
(2009)
Cancer Genomics Proteomics
, vol.6
, pp. 281-296
-
-
Ahmed, F.E.1
Jeffries, C.D.2
Vos, P.W.3
-
8
-
-
33947215566
-
Transcriptomic molecular markers for screening human colon cancer in stool & tissue
-
Ahmed FE, Vos P, iJames S et al. Transcriptomic molecular markers for screening human colon cancer in stool & tissue. Cancer Genomics Proteomics 4, 1-20 (2007).
-
(2007)
Cancer Genomics Proteomics
, vol.4
, pp. 1-20
-
-
Ahmed, F.E.1
Vos, P.2
Ijames, S.3
-
9
-
-
84879391556
-
Diagnostic microRNA markers to screen for sporadic human colon cancer in stool: I Proof of principle
-
Ahmed FE, Ahmed NC, Vos PW et al. Diagnostic microRNA markers to screen for sporadic human colon cancer in stool: I. Proof of principle. Cancer Genomics Proteomics 10(3), 93-113 (2013).
-
(2013)
Cancer Genomics Proteomics
, vol.10
, Issue.3
, pp. 93-113
-
-
Ahmed, F.E.1
Ahmed, N.C.2
Vos, P.W.3
-
10
-
-
84864666526
-
Diagnostic microRNA markers to screen for sporadic human colon cancer in blood
-
Ahmed FE, Ahmed NC, Vos PW et al. Diagnostic microRNA markers to screen for sporadic human colon cancer in blood. Cancer Genomics Proteomics 9, 179-192 (2012).
-
(2012)
Cancer Genomics Proteomics
, vol.9
, pp. 179-192
-
-
Ahmed, F.E.1
Ahmed, N.C.2
Vos, P.W.3
-
11
-
-
0031058861
-
Fecal occult blood testing for colorectal cancer. Can we afford to do this?
-
Ahlquist DA. Fecal occult blood testing for colorectal cancer. Can we afford to do this? Gastroenterol. Clin. North Am. 26, 41-55 (1997).
-
(1997)
Gastroenterol. Clin. North Am
, vol.26
, pp. 41-55
-
-
Ahlquist, D.A.1
-
12
-
-
33645118806
-
Increased use of colorectal cancer test: United States, 2002 and 2004
-
Centers for Disease Control and Prevention
-
Centers for Disease Control and Prevention. Increased use of colorectal cancer test: United States, 2002 and 2004. MMWR Mortal. Wkly 55, 208-311 (2006).
-
(2006)
MMWR Mortal. Wkly
, vol.55
, pp. 208-311
-
-
-
13
-
-
33947197270
-
Comparison of the immunochemical fecal occult blood test and total colonoscopy in the asymptomatic population
-
Nair P, Lagerhola S, Dutta S et al. Comparison of the immunochemical fecal occult blood test and total colonoscopy in the asymptomatic population. Gastroenterology 125, 422-428 (2006).
-
(2006)
Gastroenterology
, vol.125
, pp. 422-428
-
-
Nair, P.1
Lagerhola, S.2
Dutta, S.3
-
14
-
-
76249089855
-
Annual report to the nation on the status of cancer, 1975- 2007, featuring colorectal cancer trends and impact of interventions (risk factors, screening, and treatment) to reduce future rates
-
Kohler BA, Ward E, McCarthy BJ et al. Annual report to the nation on the status of cancer, 1975-2007, featuring colorectal cancer trends and impact of interventions (risk factors, screening, and treatment) to reduce future rates. Cancer 116, 544-573 (2010).
-
(2010)
Cancer
, vol.116
, pp. 544-573
-
-
Kohler, B.A.1
Ward, E.2
McCarthy, B.J.3
-
15
-
-
84856209876
-
Upper and lower gastrointestinal endoscopy mortality: The medical examiners perspective. Forensic
-
DeRoux SJ, Sgarlato A., Upper and lower gastrointestinal endoscopy mortality: the medical examiners perspective. Forensic, Sci. Med. Pathol, 8, (1) 4-12, 2012
-
(2012)
Sci. Med. Pathol
, vol.8
, Issue.1
, pp. 4-12
-
-
Deroux, S.J.1
Sgarlato, A.2
-
16
-
-
81855163394
-
Trends in colorectal cancer incidence by anatomic site and disease stage in the United States from 1976 to 2005
-
Cheng L, Eng G, Nieman L et al. Trends in colorectal cancer incidence by anatomic site and disease stage in the United States from 1976 to 2005. Am. J. Clin. Oncol. 34, 573-580 (2011).
-
(2011)
Am. J. Clin. Oncol
, vol.34
, pp. 573-580
-
-
Cheng, L.1
Eng, G.2
Nieman, L.3
-
17
-
-
66149133290
-
The impact of dietary and lifestyle risk factors on risk of colorectal cancer: A quantitative overview of the epidemiological evidence
-
Huxley RR, Ansary-Moghaddam A, Clifton P et al. The impact of dietary and lifestyle risk factors on risk of colorectal cancer: a quantitative overview of the epidemiological evidence. J. Natl Cancer Inst. 125, 171-180 (2009).
-
(2009)
J. Natl Cancer Inst
, vol.125
, pp. 171-180
-
-
Huxley, R.R.1
Ansary-Moghaddam, A.2
Clifton, P.3
-
18
-
-
23244443139
-
Comparison of the immunochemical fecal occult blood test and total colonoscopy in the asymptomatic population
-
Morikawa T, Kato J, Yamaji et al. Comparison of the immunochemical fecal occult blood test and total colonoscopy in the asymptomatic population. Gastroenterology 125, 422-428 (2006).
-
(2006)
Gastroenterology
, vol.125
, pp. 422-428
-
-
Morikawa, T.1
Yamaji, K.J.2
-
19
-
-
80655126910
-
Acceptability and side-effects of colonoscopy and sigmoidoscopy in a screening setting
-
Senore C, Ederle A, Fantin A et al. Acceptability and side-effects of colonoscopy and sigmoidoscopy in a screening setting. J. Med. Screen. 18(3), 128-134 (2011).
-
(2011)
J. Med. Screen
, vol.18
, Issue.3
, pp. 128-134
-
-
Senore, C.1
Ederle, A.2
Fantin, A.3
-
20
-
-
0038215387
-
Long-term efficacy of sigmoidoscopy in the reduction of colorectal cancer incidence
-
Newcomb PA, Storer BE, Morimoto LA et al. Long-term efficacy of sigmoidoscopy in the reduction of colorectal cancer incidence. J. Natl Cancer Inst. 99, 622-625 (2003).
-
(2003)
J. Natl Cancer Inst
, vol.99
, pp. 622-625
-
-
Newcomb, P.A.1
Storer, B.E.2
Morimoto, L.A.3
-
21
-
-
32944479658
-
Right-sided shift of colorectal adenomas with aging
-
Yamai Y, Mitsushima T, Ikuma H et al. Right-sided shift of colorectal adenomas with aging. Gastrointest. Endoscopy 63, 453-458 (2006).
-
(2006)
Gastrointest. Endoscopy
, vol.63
, pp. 453-458
-
-
Yamai, Y.1
Mitsushima, T.2
Ikuma, H.3
-
22
-
-
0037420021
-
Risk of perforation after colonoscopy or sigmoidoscopy: A population based study
-
Gatto NM, Frucht H, Sundarararjan V et al. Risk of perforation after colonoscopy or sigmoidoscopy: a population based study. J. Natl Cancer Inst. 95, 230-236 (2002).
-
(2002)
J. Natl Cancer Inst
, vol.95
, pp. 230-236
-
-
Gatto, N.M.1
Frucht, H.2
Sundarararjan, V.3
-
23
-
-
14544292891
-
Differential gene expression in colon cancer of the ceacum versus the sigmoid and rectosigmoid
-
Birkenkamp-Demtroder K, Olesen SH. Differential gene expression in colon cancer of the ceacum versus the sigmoid and rectosigmoid. Gut 54, 374-384 (2003).
-
(2003)
Gut
, vol.54
, pp. 374-384
-
-
Birkenkamp-Demtroder, K.1
Olesen, S.H.2
-
24
-
-
0035102240
-
Dukes B colorectal cancer: Distinct genetic categories and clinical outcome based on proximal or distal tumor locations
-
Gervaz P, Bouzourene H, Gerottini JP. Dukes B colorectal cancer: distinct genetic categories and clinical outcome based on proximal or distal tumor locations. Dis. Colon Rectum 44, 364-372 (2001).
-
(2001)
Dis. Colon Rectum
, vol.44
, pp. 364-372
-
-
Gervaz, P.1
Bouzourene, H.2
Gerottini, J.P.3
-
25
-
-
0036132775
-
Stool screening for colorectal cancer: Evolution from occult blood to molecular markers
-
Ahlquist DA, Shuber AP. Stool screening for colorectal cancer: evolution from occult blood to molecular markers. Clin. Chim. Acta 315, 151-157 (2002).
-
(2002)
Clin. Chim. Acta
, vol.315
, pp. 151-157
-
-
Ahlquist, D.A.1
Shuber, A.P.2
-
26
-
-
4143084914
-
Colonoscopic miss rates for right-sided colon cancer: Population-based study
-
Bressler B, Paszat LF, Vinden C et al. Colonoscopic miss rates for right-sided colon cancer: population-based study. Gastroenterology 123, 452-456 (2004).
-
(2004)
Gastroenterology
, vol.123
, pp. 452-456
-
-
Bressler, B.1
Paszat, L.F.2
Vinden, C.3
-
28
-
-
0346098002
-
Minimal preparation computed tomography instead of barium enema/ colonoscopy for suspected colon cancer in frail elderly patients: An outcome analysis study
-
Kealey SM, Dodd JD, MacEneaney PM et al. Minimal preparation computed tomography instead of barium enema/ colonoscopy for suspected colon cancer in frail elderly patients: an outcome analysis study. Clin. Radiol. 59, 44-52 (2004).
-
(2004)
Clin. Radiol
, vol.59
, pp. 44-52
-
-
Kealey, S.M.1
Dodd, J.D.2
Maceneaney, P.M.3
-
29
-
-
11144356831
-
Methylation changes in fecal DNA: A marker for colorectal cancer screening
-
Muller HM, Oberwalder M, Fiegl H et al. Methylation changes in fecal DNA: a marker for colorectal cancer screening. Lancet 363, 1283-1285 (2004).
-
(2004)
Lancet
, vol.363
, pp. 1283-1285
-
-
Muller, H.M.1
Oberwalder, M.2
Fiegl, H.3
-
30
-
-
13544257481
-
Analysis of promoter methylation in stool: A novel method for the detection of colorectal cancer
-
Lenhard K, Bommer GT, Asutay S et al. Analysis of promoter methylation in stool: a novel method for the detection of colorectal cancer. Clin. Gastroenterol. Hepatol. 3, 142-149 (2005).
-
(2005)
Clin. Gastroenterol. Hepatol
, vol.3
, pp. 142-149
-
-
Lenhard, K.1
Bommer, G.T.2
Asutay, S.3
-
32
-
-
10844281210
-
Fecal DNA versus fecal occult blood for colorectal cancer screening in an average-risk population
-
Imperiale TF, Ransohoff DF, Itzkowitz SH et al. Fecal DNA versus fecal occult blood for colorectal cancer screening in an average-risk population. N. Engl. J. Med. 351, 2704-2714 (2004).
-
(2004)
N. Engl. J. Med
, vol.351
, pp. 2704-2714
-
-
Imperiale, T.F.1
Ransohoff, D.F.2
Itzkowitz, S.H.3
-
33
-
-
77953451371
-
Liquid chromatography-mass spectrometry: A tool for proteome analysis & biomarker discovery and validation
-
Ahmed FE. Liquid chromatography-mass spectrometry: a tool for proteome analysis & biomarker discovery and validation. Exp. Opin. Mol. Diagn. 3, 429-444 (2009).
-
(2009)
Exp. Opin. Mol. Diagn
, vol.3
, pp. 429-444
-
-
Ahmed, F.E.1
-
34
-
-
11144285448
-
Stool screening for colorectal cancer: Molecular approaches
-
Osborn NK, Ahlquist DA. Stool screening for colorectal cancer: molecular approaches. Gastroenterology 128, 192-206 (2005).
-
(2005)
Gastroenterology
, vol.128
, pp. 192-206
-
-
Osborn, N.K.1
Ahlquist, D.A.2
-
35
-
-
0037204202
-
Detection of APC mutations in fecal and DNA from patients with colorectal tumors
-
Traverso G, Shuber A, Levin B et al. Detection of APC mutations in fecal and DNA from patients with colorectal tumors. N. Engl. J. Med. 346, 311-320 (2002).
-
(2002)
N. Engl. J. Med
, vol.346
, pp. 311-320
-
-
Traverso, G.1
Shuber, A.2
Levin, B.3
-
36
-
-
0034322371
-
Colorectal cancer screening by detection of altered human DNA in stool: Feasibility of a multitarget assay panel
-
Ahlquist DA, Skoletsky JE, Boynton KA et al. Colorectal cancer screening by detection of altered human DNA in stool: feasibility of a multitarget assay panel. Gastroenterology 119, 1219-1227 (2000).
-
(2000)
Gastroenterology
, vol.119
, pp. 1219-1227
-
-
Ahlquist, D.A.1
Skoletsky, J.E.2
Boynton, K.A.3
-
37
-
-
26844496826
-
Projected national impact of colorectal cancer screening on clinical and economic outcomes and health services demand
-
Ladabaum U, Song K. Projected national impact of colorectal cancer screening on clinical and economic outcomes and health services demand. Gastroenterology 129, 1151-1126 (2005).
-
(2005)
Gastroenterology
, vol.129
, pp. 1151-1126
-
-
Ladabaum, U.1
Song, K.2
-
38
-
-
33746127395
-
Proteomic analysis reveals field-wide changes in protein expression in the morphologically normal mucosa of patients with colorectal neoplasia
-
Polley AC, Mulholland F, Pin C et al. Proteomic analysis reveals field-wide changes in protein expression in the morphologically normal mucosa of patients with colorectal neoplasia. Cancer Res. 66, 6553-6562 (2006).
-
(2006)
Cancer Res
, vol.66
, pp. 6553-6562
-
-
Polley, A.C.1
Mulholland, F.2
Pin, C.3
-
39
-
-
13244255265
-
Colon cancer secreted protein-2 (CCSP-2) a novel candidate serological marker of colon neoplasia
-
Xin B, Platzer P, Fink SP et al. Colon cancer secreted protein-2 (CCSP-2) a novel candidate serological marker of colon neoplasia. Oncogene 24, 724-731 (2005).
-
(2005)
Oncogene
, vol.24
, pp. 724-731
-
-
Xin, B.1
Platzer, P.2
Fink, S.P.3
-
40
-
-
84896983620
-
Carcinoembryonic antigen and CD44 variant isoforms cooperate to mediate colon carcinoma cell adhesion to E- and L-selectin in shear flow
-
Thomas SN, Zhu F, Schnaar RL et al. Carcinoembryonic antigen and CD44 variant isoforms cooperate to mediate colon carcinoma cell adhesion to E- and L-selectin in shear flow. Biorheology 46, 207-225 (2008).
-
(2008)
Biorheology
, vol.46
, pp. 207-225
-
-
Thomas, S.N.1
Zhu, F.2
Schnaar, R.L.3
-
41
-
-
0019428714
-
Specific antigen in serum of patients with colon carcinoma
-
Koprowski H, Herlyn M, Steplewski Z, Sears HF. Specific antigen in serum of patients with colon carcinoma. Science 212, 43-55 (1981).
-
(1981)
Science
, vol.212
, pp. 43-55
-
-
Koprowski, H.1
Herlyn, M.2
Steplewski, Z.3
Sears, H.F.4
-
42
-
-
0035117342
-
Guidelines for the early detection of cancer: Update of the early detection guidelines for prostate, colorectal and endometrial cancers
-
American Cancer Society
-
Smith RA, von Eschenbach AC, Wender R et al. American Cancer Society guidelines for the early detection of cancer: update of the early detection guidelines for prostate, colorectal and endometrial cancers. CA Cancer J. Clin. 51, 38-75 (2001).
-
(2001)
CA Cancer J. Clin
, vol.51
, pp. 38-75
-
-
Smith, R.A.1
Von Eschenbach, A.C.2
Wender, R.3
-
43
-
-
66049112674
-
Differential expression of microRNA in plasma of patients with colorectal cancer: A potential marker for colorectal cancer screening
-
Ng EKO, Chong WWS, Jin H et al. Differential expression of microRNA in plasma of patients with colorectal cancer: a potential marker for colorectal cancer screening. Gut 58, 1375-1381 (2009).
-
(2009)
Gut
, vol.58
, pp. 1375-1381
-
-
Eko, N.1
Wws, C.2
Jin, H.3
-
44
-
-
77954485554
-
Fecal miRNAs as novel biomarkers for colon cancer screening
-
Link A, Balaguer F, Shen Y et al. Fecal miRNAs as novel biomarkers for colon cancer screening. Cancer Epidemiol. Biomarkers Prev. 19, 1766-1774 (2010).
-
(2010)
Cancer Epidemiol. Biomarkers Prev
, vol.19
, pp. 1766-1774
-
-
Link, A.1
Balaguer, F.2
Shen, Y.3
-
45
-
-
78649251518
-
MicroRNA expression profiling of exfoliated colonocytes isolated from feces for colorectal cancer screening
-
Koga Y, Yasunaga M, Takahashi A et al. MicroRNA expression profiling of exfoliated colonocytes isolated from feces for colorectal cancer screening. Cancer Prev. Res. 3, 1435-1442 (2010).
-
(2010)
Cancer Prev. Res
, vol.3
, pp. 1435-1442
-
-
Koga, Y.1
Yasunaga, M.2
Takahashi, A.3
-
46
-
-
84860391473
-
Differential expression of miR-144 as a novel fecal-based diagnostic marker for colorectal cancer
-
Kalimutho M, Del Vecchio BG, Di Cecilia S et al. Differential expression of miR-144 as a novel fecal-based diagnostic marker for colorectal cancer. J. Gastroenterol. 46, 1391-1402 (2011).
-
(2011)
J. Gastroenterol
, vol.46
, pp. 1391-1402
-
-
Kalimutho, M.1
Del Vecchio, B.G.2
Di Cecilia, S.3
-
47
-
-
79957603048
-
Epigenetically silenced miR-34b/c as a novel faecal-based screening marker for colorectal cancer
-
Kalimutho M, Di Cecilia S, Del Vecchio BG et al. Epigenetically silenced miR-34b/c as a novel faecal-based screening marker for colorectal cancer. Br. J. Cancer 24, 1770-17780 (2011).
-
(2011)
Br. J. Cancer
, vol.24
, pp. 1770-17780
-
-
Kalimutho, M.1
Di Cecilia, S.2
Del Vecchio, B.G.3
-
48
-
-
84866690207
-
Dysregulation of microRNAs in colonic field carcinogenesis: Implications for screening
-
Kunte D P, Delacruz M, Wali R K et al. Dysregulation of microRNAs in colonic field carcinogenesis: implications for screening. PLoS ONE 7, e45591 (2012).
-
(2012)
PLoS ONE
, vol.7
-
-
Kunte, D.P.1
Delacruz, M.2
Wali, R.K.3
-
49
-
-
84859603174
-
Detection of miR-92a and miR-21 in stool samples as potential screening biomarkers for colorectal cancer and polyps
-
Wu CW, Ng SS, Dong YJ et al. Detection of miR-92a and miR-21 in stool samples as potential screening biomarkers for colorectal cancer and polyps. Gut 61, 739-745 (2012).
-
(2012)
Gut
, vol.61
, pp. 739-745
-
-
Wu, C.W.1
Ng, S.S.2
Dong, Y.J.3
-
51
-
-
51049119231
-
Diagnostic and prognostic microRNAs in Stage II colon cancer
-
Schepler T, Reinert JT, Oslenfeld MS et al. Diagnostic and prognostic microRNAs in Stage II colon cancer. Cancer Res. 68, 6416-6424 (2008).
-
(2008)
Cancer Res
, vol.68
, pp. 6416-6424
-
-
Schepler, T.1
Reinert, J.T.2
Oslenfeld, M.S.3
-
52
-
-
38749083425
-
MicroRNAs and cancer: Profile, profile, profile
-
Barbarotto E, Schmittgen TD, Calin GA. MicroRNAs and cancer: profile, profile, profile. Int. J. Cancer 122, 969-977 (2008).
-
(2008)
Int. J. Cancer
, vol.122
, pp. 969-977
-
-
Barbarotto, E.1
Schmittgen, T.D.2
Calin, G.A.3
-
53
-
-
38749089854
-
MicroRNA expression profile associated with progression and therapeutic outcome in colon adenocarcinoma
-
Schetter AJ, Leung SY, Sohn JJ et al. MicroRNA expression profile associated with progression and therapeutic outcome in colon adenocarcinoma. J. Am. Med. Assoc. 299, 425-436 (2008).
-
(2008)
J. Am. Med. Assoc
, vol.299
, pp. 425-436
-
-
Schetter, A.J.1
Leung, S.Y.2
Sohn, J.J.3
-
54
-
-
33750370444
-
MicroRNA signatures in human cancers
-
Calin GA, Croce CM. MicroRNA signatures in human cancers. Nat. Rev. Cancer 6, 857-866 (2006).
-
(2006)
Nat. Rev. Cancer
, vol.6
, pp. 857-866
-
-
Calin, G.A.1
Croce, C.M.2
-
55
-
-
20444460289
-
MicroRNA expression profiles classify human cancers
-
Lu J, Getz G, Miska EA et al. MicroRNA expression profiles classify human cancers. Nature 435, 834-838 (2005).
-
(2005)
Nature
, vol.435
, pp. 834-838
-
-
Lu, J.1
Getz, G.2
Miska, E.A.3
-
56
-
-
63849290407
-
Clinical, pathological, and molecular features of early-onset colorectal carcinoma
-
Yantis RK, Goodarzi M, Zhou XK et al. Clinical, pathological, and molecular features of early-onset colorectal carcinoma. Am. J. Surg. Pathol. 33, 572-582 (2009).
-
(2009)
Am. J. Surg. Pathol
, vol.33
, pp. 572-582
-
-
Yantis, R.K.1
Goodarzi, M.2
Zhou, X.K.3
-
57
-
-
79960098041
-
MicroRNA signatures: Novel biomarkers for colorectal cancers
-
Luo X, Burwinke B, Tao S, Brenner J. MicroRNA signatures: Novel biomarkers for colorectal cancers. Cancer Epidemiol. Biomarkers Prev. 20, 1272-1286 (2011).
-
(2011)
Cancer Epidemiol. Biomarkers Prev
, vol.20
, pp. 1272-1286
-
-
Luo, X.1
Burwinke, B.2
Tao, S.3
Brenner, J.4
-
58
-
-
84897001549
-
Testing for genetically modified organisms (GMOs) in food products
-
Ahmed FE. Testing for genetically modified organisms (GMOs) in food products. Lab. Plus Intern. 16, 8-16 (2002).
-
(2002)
Lab. Plus Intern
, vol.16
, pp. 8-16
-
-
Ahmed, F.E.1
-
59
-
-
14944346049
-
Molecular markers for human colon cancer in stool and blood identified by RT-PCR
-
Ahmed FE, Vos P. Molecular markers for human colon cancer in stool and blood identified by RT-PCR. Anticancer Res. 24, 4127-4134 (2004).
-
(2004)
Anticancer Res
, vol.24
, pp. 4127-4134
-
-
Ahmed, F.E.1
Vos, P.2
-
60
-
-
78149409316
-
Export of microRNAs and microRNA-protective protein by mammalian cells
-
Wang K, Zhang S. Weber J. Baxter D, Galas DJ. Export of microRNAs and microRNA-protective protein by mammalian cells. Nucleic Acids Res. 38, 7248-7259 (2010).
-
(2010)
Nucleic Acids Res
, vol.38
, pp. 7248-7259
-
-
Wang, K.1
Zhang, S.2
Weber, J.3
Baxter, D.4
Galas, D.J.5
-
61
-
-
79953202200
-
Argonaute 2 complexes carry a population of circulating microRNAs independent of vesicles in human plasma
-
Arroyo JD, Chevillet JR. Kroh EM et al. Argonaute 2 complexes carry a population of circulating microRNAs independent of vesicles in human plasma. Proc. Natl Acad. Sci. USA 108, 5003-5008 (2011).
-
(2011)
Proc. Natl Acad. Sci. USA
, vol.108
, pp. 5003-5008
-
-
Arroyo, J.D.1
Chevillet, J.R.2
Kroh, E.M.3
-
62
-
-
79953301730
-
MicroRNAs are transported in plasma and delivered to recipient cells by high-density lipoproteins
-
Vickers KC, Palmisano BT, Shoucri BM et al. MicroRNAs are transported in plasma and delivered to recipient cells by high-density lipoproteins. Nat. Cell Biol. 13, 423 (2011).
-
(2011)
Nat. Cell Biol
, vol.13
, Issue.423
-
-
Vickers, K.C.1
Palmisano, B.T.2
Shoucri, B.M.3
-
63
-
-
57849130395
-
Detection of microRNA expression in human peripheral microvesicles
-
Hunter MP. Detection of microRNA expression in human peripheral microvesicles. PLoS ONE 3, e3694 (2008).
-
(2008)
PLoS ONE
, vol.3
-
-
Hunter, M.P.1
-
64
-
-
13644270581
-
Improved methods for extracting RNA from exfoliated human colonocytes in stool and RT-PCR analysis
-
Ahmed FE, iJames S, Lysle DL et al. Improved methods for extracting RNA from exfoliated human colonocytes in stool and RT-PCR analysis. Dig. Dis. Sci. 49, 1889-1898 (2004).
-
(2004)
Dig. Dis. Sci
, vol.49
, pp. 1889-1898
-
-
Ahmed, F.E.1
Ijames, S.2
Lysle, D.L.3
-
65
-
-
67649729608
-
A novel and universal method for microRNA RT-qPCR data normalization
-
Mestdagh P, Van Vlierberghe P, De Weer A et al. A novel and universal method for microRNA RT-qPCR data normalization. Genome Biol. 10, R64 (2009).
-
(2009)
Genome Biol
, vol.10
-
-
Mestdagh, P.1
Van Vlierberghe, P.2
De Weer, A.3
-
66
-
-
22844440427
-
Identification of hundreds of conserved and nonconserved human microRNAs
-
Bentwich I, Avniel A, Karov Y et al. Identification of hundreds of conserved and nonconserved human microRNAs. Nat. Genet. 37, 766-770 (2005).
-
(2005)
Nat. Genet
, vol.37
, pp. 766-770
-
-
Bentwich, I.1
Avniel, A.2
Karov, Y.3
-
67
-
-
79959425811
-
Specific and sensitive quantitative RT-PCR of miRNAs with DNA primers
-
Balcells I, Cirera S, Busk PK. Specific and sensitive quantitative RT-PCR of miRNAs with DNA primers. BMC Biotechnol. 11, 70 (2011).
-
(2011)
BMC Biotechnol
, vol.11
, Issue.70
-
-
Balcells, I.1
Cirera, S.2
Busk, P.K.3
-
68
-
-
57649091633
-
The detection of differentially expressed microRNAs from the serum of ovarian cancer patients using a novel real-time PCR platform
-
Resnick KE, Alder H, Hagan JP et al. The detection of differentially expressed microRNAs from the serum of ovarian cancer patients using a novel real-time PCR platform. Gynecol. Oncol. 112, 55-59 (2009).
-
(2009)
Gynecol. Oncol
, vol.112
, pp. 55-59
-
-
Resnick, K.E.1
Alder, H.2
Hagan, J.P.3
-
69
-
-
84876466682
-
A comparison of miRA isolation and RT-qPCR technologies and their effects on quantification accuracy and repeatability
-
Redshaw N, Wilkes T, Whale A et al. A comparison of miRA isolation and RT-qPCR technologies and their effects on quantification accuracy and repeatability. Biotechniques 54, 155-164 (2013).
-
(2013)
Biotechniques
, vol.54
, pp. 155-164
-
-
Redshaw, N.1
Wilkes, T.2
Whale, A.3
-
70
-
-
33846813656
-
Expression profiling identifies distinct microRNA signature in pancreatic cancer
-
Lee EJ, Gusev Y, Jiang J et al. Expression profiling identifies distinct microRNA signature in pancreatic cancer. Int. J. Cancer 120, 1046-1054 (2007).
-
(2007)
Int. J. Cancer
, vol.120
, pp. 1046-1054
-
-
Lee, E.J.1
Gusev, Y.2
Jiang, J.3
-
71
-
-
33644819964
-
Unique microRNA molecular profiles in lung cancer diagnosis and prognosis
-
Yanaihara N, Caplen N, Bowman E et al. Unique microRNA molecular profiles in lung cancer diagnosis and prognosis. Cancer Cell 9, 189-198 (2006).
-
(2006)
Cancer Cell
, vol.9
, pp. 189-198
-
-
Yanaihara, N.1
Caplen, N.2
Bowman, E.3
-
72
-
-
23844555119
-
MicroRNA gene expression deregulation in human breast cancer
-
Iorio MV, Ferracin M, Liu CG et al. MicroRNA gene expression deregulation in human breast cancer. Cancer Res. 65, 7065-7070 (2005).
-
(2005)
Cancer Res
, vol.65
, pp. 7065-7070
-
-
Iorio, M.V.1
Ferracin, M.2
Liu, C.G.3
-
73
-
-
5344273958
-
Microarray analysis of microRNA expression in the developing mammalian brain
-
Miska EA, Alvarez-Saavedra E, Townsend M et al. Microarray analysis of microRNA expression in the developing mammalian brain. Genome Biol. 5, R68 (2004).
-
(2004)
Genome Biol
, vol.5
-
-
Miska, E.A.1
Alvarez-Saavedra, E.2
Townsend, M.3
-
74
-
-
0346458628
-
Identification of many microRNAs that copurify with polyribosomes in mammalian neurons
-
Kim J, Krichevsky A, Grad Y et al. Identification of many microRNAs that copurify with polyribosomes in mammalian neurons. Proc. Natl Acad. Sci. USA 101, 360-365 (2004).
-
(2004)
Proc. Natl Acad. Sci. USA
, vol.101
, pp. 360-365
-
-
Kim, J.1
Krichevsky, A.2
Grad, Y.3
-
75
-
-
33144490646
-
A microRNA expression signature of human solid tumors defines cancer gene targets
-
Volinia S, Calin GA, Liu CG et al. A microRNA expression signature of human solid tumors defines cancer gene targets. Proc. Natl Acad. Sci. USA 103, 2257-2261 (2006).
-
(2006)
Proc. Natl Acad. Sci. USA
, vol.103
, pp. 2257-2261
-
-
Volinia, S.1
Calin, G.A.2
Liu, C.G.3
-
76
-
-
33747628074
-
Identification by real-time PCR of mature microRNAs differentially expressed in colorectal cancer and non-tumor tissues
-
Aandres E, Cubedo E, Agirre X et al. Identification by real-time PCR of mature microRNAs differentially expressed in colorectal cancer and non-tumor tissues. Mol. Cancer 5, 29 (2006).
-
(2006)
Mol. Cancer
, vol.5
, pp. 29
-
-
Aandres, E.1
Cubedo, E.2
Agirre, X.3
-
77
-
-
27244433702
-
Real-time expression profiling of microRNA precursors in human cancer cell lines
-
Jiang J, Lee EJ, Gusev Y, Schmittgen TD. Real-time expression profiling of microRNA precursors in human cancer cell lines. Nucleic Acids Res. 33, 5394-5403 (2005).
-
(2005)
Nucleic Acids Res
, vol.33
, pp. 5394-5403
-
-
Jiang, J.1
Lee, E.J.2
Gusev, Y.3
Schmittgen, T.D.4
-
78
-
-
36348994146
-
MicroRNA 145 targets the insulin receptor substrate-1 and inhibits the growth of colon cancer cells
-
Shi B, Stepp-Lorenzino L, Prisco M et al. MicroRNA 145 targets the insulin receptor substrate-1 and inhibits the growth of colon cancer cells. J. Biol. Chem. 282, 32582-32590 (2007).
-
(2007)
J. Biol. Chem
, vol.282
, pp. 32582-32590
-
-
Shi, B.1
Stepp-Lorenzino, L.2
Prisco, M.3
-
79
-
-
27244434788
-
A microRNA signature associated with prognosis and progression in chronic lymphocytic leukemia
-
Calin GA, Ferracin M, Cimmino A et al. A microRNA signature associated with prognosis and progression in chronic lymphocytic leukemia. N. Engl. J. Med. 353, 1793-1801 (2005).
-
(2005)
N. Engl. J. Med
, vol.353
, pp. 1793-1801
-
-
Calin, G.A.1
Ferracin, M.2
Cimmino, A.3
-
80
-
-
14844354250
-
Accumulation of miR-155 and BIC RNA in human B cell lymphomas
-
Eis PS, Tam W, Sun L et al. Accumulation of miR-155 and BIC RNA in human B cell lymphomas. Proc. Natl Acad. Sci. USA 102, 3627-3632 (2003).
-
(2003)
Proc. Natl Acad. Sci. USA
, vol.102
, pp. 3627-3632
-
-
Eis, P.S.1
Tam, W.2
Sun, L.3
-
81
-
-
18744396337
-
Frequent deletions and downregulation of microRNA genes miR15 and miR16 at 13q14 in chronic lymphocytic leukemia
-
Calin GA, Dumitru CD, Shimizu M et al. Frequent deletions and downregulation of microRNA genes miR15 and miR16 at 13q14 in chronic lymphocytic leukemia. Proc. Natl Acad. Sci. USA 99, 15524-15529 (2002).
-
(2002)
Proc. Natl Acad. Sci. USA
, vol.99
, pp. 15524-15529
-
-
Calin, G.A.1
Dumitru, C.D.2
Shimizu, M.3
-
82
-
-
84896967337
-
Optimal miRNA RT-qPCR
-
Nybo K, Lo PCH. Optimal miRNA RT-qPCR. Biotechniques 54. 113 (2013).
-
(2013)
Biotechniques
, vol.54
, Issue.113
-
-
Nybo, K.1
Lo, P.C.H.2
-
83
-
-
65749089057
-
Differences in mRNA and microRNA expression profiles in human colon adenocarcinoma HT-29 cells treated with either intensity-modulated radiation therapy (IMRT), or conventional radiation therapy (RT)
-
Ahmed FE, Vos PW, Clark J et al. Differences in mRNA and microRNA expression profiles in human colon adenocarcinoma HT-29 cells treated with either intensity-modulated radiation therapy (IMRT), or conventional radiation therapy (RT). Cancer Genomics Proteomics 6, 109-128 (2009).
-
(2009)
Cancer Genomics Proteomics
, vol.6
, pp. 109-128
-
-
Ahmed, F.E.1
Vos, P.W.2
Clark, J.3
-
84
-
-
55249119513
-
MicroRNAs are differentially expressed in ulcerative colitis and alter expression of macrophage inflammatory particle 2-a
-
Wu F, Zikusoka M, Trindade A et al. MicroRNAs are differentially expressed in ulcerative colitis and alter expression of macrophage inflammatory particle 2-a. Gastroenterology 135, 1626-1635 (2008).
-
(2008)
Gastroenterology
, vol.135
, pp. 1626-1635
-
-
Wu, F.1
Zikusoka, M.2
Trindade, A.3
-
85
-
-
54849408182
-
An analysis of human microRNA and disease associations
-
Lu M, Zhang Q, Deng M et al. An analysis of human microRNA and disease associations. PLoS ONE 3, e3420 (2008).
-
(2008)
PLoS ONE
, vol.3
-
-
Lu, M.1
Zhang, Q.2
Deng, M.3
-
86
-
-
33845640840
-
Expression microarray proteomics and the search for cancer biomarkers
-
Ahmed FE. Expression microarray proteomics and the search for cancer biomarkers. Curr. Genomics 7, 399-426 (2006).
-
(2006)
Curr. Genomics
, vol.7
, pp. 399-426
-
-
Ahmed, F.E.1
-
87
-
-
30044439929
-
Quantitative real-time RT-PCR: Application to carcinogenesis
-
Ahmed FE. Quantitative real-time RT-PCR: application to carcinogenesis. Cancer Genomics. Proteomics. 2, 317-332 (2005).
-
(2005)
Cancer Genomics. Proteomics
, vol.2
, pp. 317-332
-
-
Ahmed, F.E.1
-
88
-
-
0346094457
-
Prediction of mammalian microRNA targets
-
Lewis BP, Shih IH, Jones-Rhodes MW et al. Prediction of mammalian microRNA targets. Cell 115, 787-789 (2003).
-
(2003)
Cell
, vol.115
, pp. 787-789
-
-
Lewis, B.P.1
Shih, I.H.2
Jones-Rhodes, M.W.3
-
89
-
-
37349042181
-
Computational methods for analysis of cellular functions and pathways collectively targeted by differentially expressed microRNA
-
Gusev Y. Computational methods for analysis of cellular functions and pathways collectively targeted by differentially expressed microRNA. Methods 44, 61-72 (2008).
-
(2008)
Methods
, vol.44
, pp. 61-72
-
-
Gusev, Y.1
-
90
-
-
37349050789
-
Computational analysis of biological functions and pathways collectively targeted by coexpressed microRNAs in cancer
-
Gusev Y, Schmittgen TD, Lerner M et al. Computational analysis of biological functions and pathways collectively targeted by coexpressed microRNAs in cancer. BMC Bioinformatics 8(Suppl. 7), S16 (2007).
-
(2007)
BMC Bioinformatics
, vol.8
, Issue.SUPPL. 7
-
-
Gusev, Y.1
Schmittgen, T.D.2
Lerner, M.3
-
91
-
-
35148882865
-
The role of microRNA in carcinogenesis and biomarker selection: A methodological perspective
-
Ahmed FE. The role of microRNA in carcinogenesis and biomarker selection: a methodological perspective. Exp. Rev. Mol. Diagn. 7, 569-603 (2007).
-
(2007)
Exp. Rev. Mol. Diagn
, vol.7
, pp. 569-603
-
-
Ahmed, F.E.1
-
92
-
-
84896904661
-
-
UICC TNM Classification of Malignant Tumors (6th Edition). Sobin LH, Wittekind CH (Eds). John Wiley, NY, USA, 170-173 (2002)
-
UICC TNM Classification of Malignant Tumors (6th Edition). Sobin LH, Wittekind CH (Eds). John Wiley, NY, USA, 170-173 (2002).
-
-
-
-
93
-
-
84896992063
-
-
AJCC Cancer Staging Manual (6th Edition). Greene FL, Page DL, Fleming ID (Eds). Springer-Verlag, NY, USA (2002)
-
AJCC Cancer Staging Manual (6th Edition). Greene FL, Page DL, Fleming ID (Eds). Springer-Verlag, NY, USA (2002).
-
-
-
-
94
-
-
62549134412
-
MicroRNA and colorectal cancer
-
DeBakey ME. MicroRNA and colorectal cancer. World J. Surg. 33, 638-646 (2009).
-
(2009)
World J. Surg
, vol.33
, pp. 638-646
-
-
Debakey, M.E.1
-
95
-
-
84896928104
-
Characterization and identification of microRNA core promoters in trout model species
-
Zhou X, Ruan J, Wang G, Zhang W. Characterization and identification of microRNA core promoters in trout model species. PLoS Comput. Biol. 337 (2005).
-
(2005)
PLoS Comput. Biol
, vol.337
-
-
Zhou, X.1
Ruan, J.2
Wang, G.3
Zhang, W.4
-
96
-
-
78651293534
-
Griffiths-Jones S miRBase: Integrating microRNA annotation and deep-sequencing data
-
Kozomara A, Griffiths-Jones S. miRBase: integrating microRNA annotation and deep-sequencing data. Nucleic Acids Res. 39(Suppl. 1), D152-D157 (2011).
-
(2011)
Nucleic Acids Res
, vol.39
, Issue.SUPPL. 1
-
-
Kozomara, A.1
-
97
-
-
0347444723
-
MicroRNAs: Genomics, biogenesis, mechanism and function
-
Bartel DP. MicroRNAs: genomics, biogenesis, mechanism and function. Cell 116, 281-297 (2004).
-
(2004)
Cell
, vol.116
, pp. 281-297
-
-
Bartel, D.P.1
-
98
-
-
0034708122
-
RNA regulates developmental timing in Caenorhabditis elegans
-
Reinhart BJ, Slack FJ, Basson M et al. RNA regulates developmental timing in Caenorhabditis elegans. Nature 403, 901-906 (2000).
-
(2000)
Nature
, vol.403
, pp. 901-906
-
-
Reinhart, B.J.1
Slack, F.J.2
Basson, M.3
-
99
-
-
7444243756
-
MicroRNAs and the regulation of cell death
-
Xu P, Guo M, Hay BA. MicroRNAs and the regulation of cell death. Trends Genet. 20, 617-624 (2004).
-
(2004)
Trends Genet
, vol.20
, pp. 617-624
-
-
Xu, P.1
Guo, M.2
Hay, B.A.3
-
100
-
-
27244432205
-
MicroRNAs as oncogenes and tumor supressors
-
Chang-Zheng C. MicroRNAs as oncogenes and tumor supressors. N. Engl. J. Med. 353, 1768-1771 (2005).
-
(2005)
N. Engl. J. Med
, vol.353
, pp. 1768-1771
-
-
Chang-Zheng, C.1
-
101
-
-
18844395361
-
Molecular markers that predict response to colon cancer therapy
-
Ahmed FE. Molecular markers that predict response to colon cancer therapy. Exp. Rev. Mol. Diagn. 5, 353-375 (2005).
-
(2005)
Exp. Rev. Mol. Diagn
, vol.5
, pp. 353-375
-
-
Ahmed, F.E.1
-
102
-
-
35748967324
-
MRNA/ microRNA gene expression profile in microsatellite unstable colorectal cancer
-
Lanza G, Ferracin M, Gafa R et al. mRNA/ microRNA gene expression profile in microsatellite unstable colorectal cancer. Mol. Cancer 6, 54 (2007).
-
(2007)
Mol. Cancer
, vol.6
, pp. 54
-
-
Lanza, G.1
Ferracin, M.2
Gafa, R.3
-
103
-
-
2442672918
-
A combined computationalexperimental approach predicts human microRNA targets
-
Kiriakidou M, Nelson PT, Kouranov A et al. A combined computationalexperimental approach predicts human microRNA targets. Genes Dev. 18, 1165-1178 (2004).
-
(2004)
Genes Dev
, vol.18
, pp. 1165-1178
-
-
Kiriakidou, M.1
Nelson, P.T.2
Kouranov, A.3
-
105
-
-
20944450160
-
Combinational microRNA target predictions
-
Krek A, Grun D, Poy MN et al. Combinational microRNA target predictions. Nat. Genet. 37, 495-500 (2005).
-
(2005)
Nat. Genet
, vol.37
, pp. 495-500
-
-
Krek, A.1
Grun, D.2
Poy, M.N.3
-
106
-
-
28944439309
-
Animal microRNAs confers robustness to gene expression and have a significant impact on 3UTR evaluation
-
Stark A, Brennecke J, Bushati N et al. Animal microRNAs confers robustness to gene expression and have a significant impact on 3UTR evaluation. Cell 123, 1133-1146 (2005).
-
(2005)
Cell
, vol.123
, pp. 1133-1146
-
-
Stark, A.1
Brennecke, J.2
Bushati, N.3
-
107
-
-
79958270237
-
MiRNA expression in colon polyps provide evidence for a multihit model of colon cancer
-
Oberg AL, French AJ, French AJ et al. miRNA expression in colon polyps provide evidence for a multihit model of colon cancer. PLoS ONE 6, e20465 (2011).
-
(2011)
PLoS ONE
, vol.6
-
-
Oberg, A.L.1
French, A.J.2
French, A.J.3
-
108
-
-
34249302620
-
Exosome mediated transfer of mRNAs and microRNAs is a novel mechanism of genetic exchange between cells
-
Valadi H, Elkstrom K, Bossios A, Sjostrand M, Lee JJ, Lotvall JO. Exosome mediated transfer of mRNAs and microRNAs is a novel mechanism of genetic exchange between cells. Nat. Cell Biol. 9, 654-659 (2007).
-
(2007)
Nat. Cell Biol
, vol.9
, pp. 654-659
-
-
Valadi, H.1
Elkstrom, K.2
Bossios, A.3
Sjostrand, M.4
Lee, J.J.5
Lotvall, J.O.6
-
109
-
-
33746660833
-
Laser microdissection: Application to carcinogenesis
-
Ahmed FE. Laser microdissection: application to carcinogenesis. Cancer Genomics Proteomics 3, 217-226 (2006).
-
(2006)
Cancer Genomics Proteomics
, vol.3
, pp. 217-226
-
-
Ahmed, F.E.1
-
110
-
-
80052023989
-
Evaluation of two commercial global miRNA expression profiling platforms for detection of less abundant miRNAs
-
Jensen SG, Lamy P, Rasmussen MH et al. Evaluation of two commercial global miRNA expression profiling platforms for detection of less abundant miRNAs. BMC Genomics 12, 435 (2011).
-
(2011)
BMC Genomics
, vol.12
, Issue.435
-
-
Jensen, S.G.1
Lamy, P.2
Rasmussen, M.H.3
-
111
-
-
29144470346
-
Real-time quantification of microRNAs by stem-loop RT-PCR
-
Chen C, Ridzon DA, Broomer AJ et al. Real-time quantification of microRNAs by stem-loop RT-PCR. Nucleic Acids Res. 33, e179 (2005).
-
(2005)
Nucleic Acids Res
, vol.33
-
-
Chen, C.1
Ridzon, D.A.2
Broomer, A.J.3
-
112
-
-
33745352069
-
The E-method: A highly accurate technique for gene-expression analysis
-
Tellman G. The E-method: a highly accurate technique for gene-expression analysis. Nat. Methods 3, 1-2 (2006).
-
(2006)
Nat. Methods
, vol.3
, pp. 1-2
-
-
Tellman, G.1
-
113
-
-
85041345665
-
-
LightCycler Software Mannheim, Germany
-
LightCycler Software-, Version 3.5. Roche Molecular Biochemicals, Mannheim, Germany, 64-79 (2001).
-
(2001)
Version 3.5. Roche Molecular Biochemicals
, pp. 64-79
-
-
-
114
-
-
13444291036
-
Improved real-time RT-PCR method for high-throughput measurements using second derivative calculation and double correction
-
Luu-The V, Paquet N, Calvo E, Cumps J. Improved real-time RT-PCR method for high-throughput measurements using second derivative calculation and double correction. Biotechniques 38, 287-293 (2005).
-
(2005)
Biotechniques
, vol.38
, pp. 287-293
-
-
Luu-The, V.1
Paquet, N.2
Calvo, E.3
Cumps, J.4
-
115
-
-
0032883806
-
Housekeeping genes as internal standards: Use and limits
-
Thellin O, Zorzi W, Lakaye B et al. Housekeeping genes as internal standards: use and limits. J. Bitechnol. 76, 291-296 (1999).
-
(1999)
J. Bitechnol
, vol.76
, pp. 291-296
-
-
Thellin, O.1
Zorzi, W.2
Lakaye, B.3
-
116
-
-
0037129827
-
Accurate normalization of real-time quantitative RT-PCR by geometric average of multiple internal control genes
-
Vandesompele J, De Preter K, Pattyn F et al. Accurate normalization of real-time quantitative RT-PCR by geometric average of multiple internal control genes. Genome Biol. 3, 7 (2010).
-
(2010)
Genome Biol
, vol.3
, Issue.7
-
-
Vandesompele, J.1
De Preter, K.2
Pattyn, F.3
-
117
-
-
0032111673
-
The gene expression index cmyc x E2F-1/p21 is highly predictive of malignant phenotype in human bronchial epithelial cells
-
DeMuth J P, Jackson C M, Weaver D A et al. The gene expression index cmyc x E2F-1/p21 is highly predictive of malignant phenotype in human bronchial epithelial cells. Am. J. Respir. Cell Mol. Biol. 19, 18-29 (1998).
-
(1998)
Am. J. Respir. Cell Mol. Biol
, vol.19
, pp. 18-29
-
-
Demuth, J.P.1
Jackson, C.M.2
Weaver, D.A.3
-
118
-
-
34250711189
-
A multivariate analysis of adhesion molecules expression in assessment of colorectal cancer
-
Nagan CY, Yamamoto H, Seshimo I et al. A multivariate analysis of adhesion molecules expression in assessment of colorectal cancer. J. Surg. Oncol. 95, 652-662 (2007).
-
(2007)
J. Surg. Oncol
, vol.95
, pp. 652-662
-
-
Nagan, C.Y.1
Yamamoto, H.2
Seshimo, I.3
-
119
-
-
54049129625
-
Pivotal evaluation of the occurrence of a biomarker used for classification or prediction: Standards for study design. of Cancer
-
Pepe MS, Feng Z, Janes H et al. Pivotal evaluation of the occurrence of a biomarker used for classification or prediction: standards for study design. of Cancer. J. Natl Cancer Inst. 100, 1432-1438 (2008).
-
(2008)
J. Natl Cancer Inst
, vol.100
, pp. 1432-1438
-
-
Pepe, M.S.1
Feng, Z.2
Janes, H.3
-
120
-
-
33645825183
-
Thousands of samples are needed to generate a robust gene list for predicting outcome in cancer
-
Ein-Dor L, Zuk O, Domany E. Thousands of samples are needed to generate a robust gene list for predicting outcome in cancer. Proc. Natl Acad. Sci. USA 103, 5923-5928 (2006).
-
(2006)
Proc. Natl Acad. Sci. USA
, vol.103
, pp. 5923-5928
-
-
Ein-Dor, L.1
Zuk, O.2
Domany, E.3
-
121
-
-
84896981021
-
-
A-Z of Quantitative PCR. Bustin SA (Ed.). International University Line, La Jolla, CA, USA (2004)
-
A-Z of Quantitative PCR. Bustin SA (Ed.). International University Line, La Jolla, CA, USA (2004).
-
-
-
-
122
-
-
1542356381
-
Standardised determination of real-time PCR efficiency from a single reaction setup
-
Tichopad A, Dilger M, Schwarz G, Pfaffl MW. Standardised determination of real-time PCR efficiency from a single reaction setup. Nucleic Acids Res. 31, 21-33 (2003).
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 21-33
-
-
Tichopad, A.1
Dilger, M.2
Schwarz, G.3
Pfaffl, M.W.4
-
123
-
-
64149097786
-
The MIQUE guidelines: Minimum information for publication of quantitative real-time PCR experiments
-
Bustin SA, Benes V, Garson JA et al. The MIQUE guidelines: Minimum information for publication of quantitative real-time PCR experiments. Clin. Chem. 55, 611-622 (2009).
-
(2009)
Clin. Chem
, vol.55
, pp. 611-622
-
-
Bustin, S.A.1
Benes, V.2
Garson, J.A.3
-
125
-
-
84863638955
-
Sample size estimation and power analysis for clinical research studies
-
Sureh KP, Chandrashekare S. Sample size estimation and power analysis for clinical research studies. J. Hum. Reprod. Sci. 5, 7-13 (2013).
-
(2013)
J. Hum. Reprod. Sci
, vol.5
, pp. 7-13
-
-
Sureh, K.P.1
Chandrashekare, S.2
-
127
-
-
84896996070
-
Classification
-
Wiley- Interscience Publication, NY, USA
-
Ripley BD. Classification. In: Encyclopedia of Statistical Sciences, Volume 1. Wiley- Interscience Publication, NY, USA (1997).
-
(1997)
Encyclopedia of Statistical Sciences
, vol.1
-
-
Ripley, B.D.1
-
128
-
-
0004258738
-
-
W.H. Freeman & Company, St. Louis, MO, USA
-
Moore DS, McCabe GP, Craig B. Introduction to the Practice of Statistics (6th Edition). W.H. Freeman & Company, St. Louis, MO, USA (2009).
-
(2009)
Introduction to the Practice of Statistics (6th Edition)
-
-
Moore, D.S.1
McCabe, G.P.2
Craig, B.3
-
129
-
-
34250711189
-
A multivariate analysis of adhesion molecules expression in assessment of colorectal cancer
-
Nagan CY, Yamamoto H, Seshimo I et al. A multivariate analysis of adhesion molecules expression in assessment of colorectal cancer. J. Surg. Oncol. 95, 652-662 (2007).
-
(2007)
J. Surg. Oncol
, vol.95
, pp. 652-662
-
-
Nagan, C.Y.1
Yamamoto, H.2
Seshimo, I.3
-
130
-
-
0037433040
-
Identifying differentially expressed genes using false discovery rate controlling procedures
-
Reiner A, Yekutieli D, Benjamini Y. Identifying differentially expressed genes using false discovery rate controlling procedures. Bioinformatics 19, 368-375 (2003).
-
(2003)
Bioinformatics
, vol.19
, pp. 368-375
-
-
Reiner, A.1
Yekutieli, D.2
Benjamini, Y.3
-
131
-
-
21444454257
-
False discovery rate, sensitivity and sample size for microarray studies
-
Pawitan Y, Michiels S, Kosciely S, Gusnato A, Polner A. False discovery rate, sensitivity and sample size for microarray studies. Bioinformatics 21, 3017-3024 (2005).
-
(2005)
Bioinformatics
, vol.21
, pp. 3017-3024
-
-
Pawitan, Y.1
Michiels, S.2
Kosciely, S.3
Gusnato, A.4
Polner, A.5
-
132
-
-
36749059023
-
Nonparametric Bayesian estimation of positive false discovery rates
-
Tang Y, Ghosal S, Roy A. Nonparametric Bayesian estimation of positive false discovery rates. Biometrics 63, 1126-1134 (2007).
-
(2007)
Biometrics
, vol.63
, pp. 1126-1134
-
-
Tang, Y.1
Ghosal, S.2
Roy, A.3
-
133
-
-
38649090064
-
False discovery rates and related statistical concepts in mass spectrometry-based proteomics
-
Choi H, Nesvizhskii AI. False discovery rates and related statistical concepts in mass spectrometry-based proteomics. J. Proteom. Res. 7, 47-50 (2008).
-
(2008)
J. Proteom. Res
, vol.7
, pp. 47-50
-
-
Choi, H.1
Nesvizhskii, A.I.2
-
136
-
-
84868547148
-
Multivariate statistical tests for comparing classification algorithms
-
Coello CA (Ed.) Springer-Verlag, Berlin, Germany, 1-5
-
Yildiz OY, Aslan A, Alpagdin E. Multivariate statistical tests for comparing classification algorithms. In: Learning and Intelligence Optimization. Coello CA (Ed.). Springer-Verlag, Berlin, Germany, 1-5 (2011).
-
(2011)
Learning and Intelligence Optimization
-
-
Yildiz, O.Y.1
Aslan, A.2
Alpagdin, E.3
-
137
-
-
0020083498
-
The meaning and use of the area under a receiver operating characteristic (ROC) curve
-
Hanley JA, McNeil BJ. The meaning and use of the area under a receiver operating characteristic (ROC) curve. Radiology 143, 29-36 (1982).
-
(1982)
Radiology
, vol.143
, pp. 29-36
-
-
Hanley, J.A.1
McNeil, B.J.2
-
138
-
-
40449141013
-
What is principal component analysis?
-
Ringner M. What is principal component analysis? Nat. Biotechnol. 26(3), 303-304 (2008).
-
(2008)
Nat Biotechnol
, vol.26
, Issue.3
, pp. 303-304
-
-
Ringner, M.1
-
139
-
-
84950434348
-
Hyperdimensional data analysis using parallel coordinates
-
Wegman E. Hyperdimensional data analysis using parallel coordinates. J. Am. Stat. Assoc. 85(411), 664-675 (1990).
-
(1990)
J. Am. Stat. Assoc
, vol.85
, Issue.411
, pp. 664-675
-
-
Wegman, E.1
-
140
-
-
0025327524
-
Biplots in biomedical research
-
Gabriel KR. Odoroff CL. Biplots in biomedical research. Stat. Med. 9(5), 469-485 (1990).
-
(1990)
Stat. Med
, vol.9
, Issue.5
, pp. 469-485
-
-
Gabriel, K.R.1
Odoroff, C.L.2
-
141
-
-
61449172037
-
Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources
-
Huang da W, Sherman BT, Lempicki RA. Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources. Nat. Protoc. 4, 44-57 (2009).
-
(2009)
Nat. Protoc
, vol.4
, pp. 44-57
-
-
Huang Da, W.1
Sherman, B.T.2
Lempicki, R.A.3
-
142
-
-
79955034412
-
Epigenetic changes in cancer
-
Esteller M. Epigenetic changes in cancer. The Scientist. 25, 34-39 (2011).
-
(2011)
The Scientist
, vol.25
, pp. 34-39
-
-
Esteller, M.1
-
143
-
-
59149084538
-
The human colon cancer methylome shows similar hypo- and hypermethylation at conserved tissue-specific CpG island shores
-
Irizarry RA, Ladd-Acosta C, Wen B et al. The human colon cancer methylome shows similar hypo- and hypermethylation at conserved tissue-specific CpG island shores. Nat. Genet. 41, 178-186 (2009).
-
(2009)
Nat. Genet
, vol.41
, pp. 178-186
-
-
Irizarry, R.A.1
Ladd-Acosta, C.2
Wen, B.3
-
144
-
-
0345357773
-
Gene silencing in association with promoter hypermethylation
-
Herman JG, Baylin SB. Gene silencing in association with promoter hypermethylation. N. Engl. J. Med. 349, 2042-2054 (2003).
-
(2003)
N. Engl. J. Med
, vol.349
, pp. 2042-2054
-
-
Herman, J.G.1
Baylin, S.B.2
-
145
-
-
79960927422
-
Increased methylation variation in epigenetic domains across cancer types
-
Hansen KD, Timp W, Corrada H et al. Increased methylation variation in epigenetic domains across cancer types. Nat. Genet. 43, 768-775 (2011).
-
(2011)
Nat. Genet
, vol.43
, pp. 768-775
-
-
Hansen, K.D.1
Timp, W.2
Corrada, H.3
-
146
-
-
71549125896
-
Human colon cancer profiles show differential microRNA expression depending on mismatch repair status and are characteristic of undifferentiated proliferative states
-
Sarver AL, French AJ, Borralho PM et al. Human colon cancer profiles show differential microRNA expression depending on mismatch repair status and are characteristic of undifferentiated proliferative states. BMC Cancer 9, 401 (2009).
-
(2009)
BMC Cancer
, vol.9
, pp. 401
-
-
Sarver, A.L.1
French, A.J.2
Borralho, P.M.3
-
147
-
-
77954368612
-
Association of microRNA expression with microsatellite instability status in colorectal adenocarcinoma
-
Earle JSL, Luthra R, Romans A et al. Association of microRNA expression with microsatellite instability status in colorectal adenocarcinoma. J. Mol. Diagn. 12, 433-440 (2010).
-
(2010)
J. Mol. Diagn
, vol.12
, pp. 433-440
-
-
Jsl, E.1
Luthra, R.2
Romans, A.3
-
148
-
-
80053528523
-
Colorectal cancers with microsatellite instability display unique miRNA profiles
-
Balaguer F, Moreira L, Lozano JJ et al. Colorectal cancers with microsatellite instability display unique miRNA profiles. Clin. Cancer Res. 17, 6239-6249 (2011).
-
(2011)
Clin. Cancer Res
, vol.17
, pp. 6239-6249
-
-
Balaguer, F.1
Moreira, L.2
Lozano, J.J.3
-
149
-
-
33745813856
-
The cartilage-specific microRNA- targets histone deacetylase 4 in mouse cells
-
Tuddenham L, Wheeler G, Ntounia-Fousara S et al. The cartilage-specific microRNA- targets histone deacetylase 4 in mouse cells. FEBS Lett. 580, 4214-4217 (2006).
-
(2006)
FEBS Lett
, vol.580
, pp. 4214-4217
-
-
Tuddenham, L.1
Wheeler, G.2
Ntounia-Fousara, S.3
-
150
-
-
33747877558
-
Mouse MAELSTROM: The link between miotic silencing of unsynapsed chromatin and microRNA pathways?
-
Costa Y, Speed RM, Gautier P et al. Mouse MAELSTROM: the link between miotic silencing of unsynapsed chromatin and microRNA pathways? Hum. Mol. Genet. 15, 2324-2334 (2006).
-
(2006)
Hum. Mol. Genet
, vol.15
, pp. 2324-2334
-
-
Costa, Y.1
Speed, R.M.2
Gautier, P.3
-
151
-
-
33745248430
-
MicroRNA target predictions in animals
-
Rajewsky N. microRNA target predictions in animals. Nat. Genet. 38. S8-S13 (2006).
-
(2006)
Nat. Genet
, vol.38
-
-
Rajewsky, N.1
-
152
-
-
33744805399
-
Specific activation of microRNA-127 with downregulation of the protooncogene BCL6 by chromatin-modifying drugs in human cancer cells
-
Saito Y, Liang G, Egger G et al. Specific activation of microRNA-127 with downregulation of the protooncogene BCL6 by chromatin-modifying drugs in human cancer cells. Cancer Cell 9, 435-443 (2006).
-
(2006)
Cancer Cell
, vol.9
, pp. 435-443
-
-
Saito, Y.1
Liang, G.2
Egger, G.3
-
153
-
-
51649083501
-
A microRNA DNA methylation signature for human cancer metastasis
-
Lujambio A, Calin GA, Villanueva A et al. A microRNA DNA methylation signature for human cancer metastasis. Proc. Natl Acad. Sci. USA 105, 13556-13561 (2008).
-
(2008)
Proc. Natl Acad. Sci. USA
, vol.105
, pp. 13556-13561
-
-
Lujambio, A.1
Calin, G.A.2
Villanueva, A.3
-
154
-
-
33748302836
-
Augmentation of tumor angiogenesis by a myc-activated microRNA cluster
-
Dews M, Homayouni A, Yu D et al. Augmentation of tumor angiogenesis by a myc-activated microRNA cluster. Nat. Genet. 38, 1060-1065 (2006).
-
(2006)
Nat. Genet
, vol.38
, pp. 1060-1065
-
-
Dews, M.1
Homayouni, A.2
Yu, D.3
-
155
-
-
28344438648
-
A minicircuitry comprised of microRNA-223 and transcription factors NFI-A and C/ EBPalpha regulates human granulopoiesis
-
Fazi F, Rosa A, Fatica A et al. A minicircuitry comprised of microRNA-223 and transcription factors NFI-A and C/ EBPalpha regulates human granulopoiesis. Cell 123, 819-831 (2005).
-
(2005)
Cell
, vol.123
, pp. 819-831
-
-
Fazi, F.1
Rosa, A.2
Fatica, A.3
-
156
-
-
84896985745
-
-
Koss Diagnostic Cytology and Histopathologic Bases (5th Edition). Lippincott, Williams & Wilkins, PA, USA (2005)
-
Koss Diagnostic Cytology and Histopathologic Bases (5th Edition). Lippincott, Williams & Wilkins, PA, USA (2005).
-
-
-
-
157
-
-
0345275965
-
The epithelial cell adhesion molecule (Ep-CAM) as a morphoregulatory molecule is a tool in surgical pathology
-
Winter MJ, Nagtegaal ID, van Krieken JH, Litvinov SV. The epithelial cell adhesion molecule (Ep-CAM) as a morphoregulatory molecule is a tool in surgical pathology. Am. J. Pathol. 163, 2139-2148 (2003).
-
(2003)
Am. J. Pathol
, vol.163
, pp. 2139-2148
-
-
Winter, M.J.1
Nagtegaal, I.D.2
Van Krieken, J.H.3
Litvinov, S.V.4
-
158
-
-
0345621612
-
Accuracy of biopsy and cytology for the preoperative diagnosis of colorectal adenocarcinoma
-
Petrelli NJ, Letourneau R, Weber T et al. Accuracy of biopsy and cytology for the preoperative diagnosis of colorectal adenocarcinoma. J. Surg. Oncol. 71, 46-49 (1999).
-
(1999)
J. Surg. Oncol
, vol.71
, pp. 46-49
-
-
Petrelli, N.J.1
Letourneau, R.2
Weber, T.3
-
159
-
-
28844486599
-
A new method for isolating colonocytes from naturally evacuated feces and its clinical application to colorectal cancer diagnosis
-
Matsushita HM, Matsumura Y, Moriya Y et al. A new method for isolating colonocytes from naturally evacuated feces and its clinical application to colorectal cancer diagnosis. Gastroenterology 129, 1918-1927 (2005).
-
(2005)
Gastroenterology
, vol.129
, pp. 1918-1927
-
-
Matsushita, H.M.1
Matsumura, Y.2
Moriya, Y.3
-
160
-
-
66949145155
-
Exosomes: Proteomic insights and diagnostic potential
-
Simpson RJ, Lim JE, Moritz RL, Mathivanan S. Exosomes: proteomic insights and diagnostic potential. Exp. Rev. Proteomics 6, 267-283 (2009).
-
(2009)
Exp. Rev. Proteomics
, vol.6
, pp. 267-283
-
-
Simpson, R.J.1
Lim, J.E.2
Moritz, R.L.3
Mathivanan, S.4
-
161
-
-
84861960860
-
Digital PCR hits its stride
-
Baker M. Digital PCR hits its stride. Nat. Methods 9, 541-544 (2007)
-
(2007)
Nat. Methods
, vol.9
, pp. 541-544
-
-
Baker, M.1
-
162
-
-
23844534811
-
Reporting recommendations for tumor marker prognostic studies (REMARK)
-
McShane LM, Altman DG, Sauerbrei W et al. Reporting recommendations for tumor marker prognostic studies (REMARK). J. Natl Cancer Inst. 97, 1180-1184 (2005).
-
(2005)
J. Natl Cancer Inst
, vol.97
, pp. 1180-1184
-
-
McShane, L.M.1
Altman, D.G.2
Sauerbrei, W.3
-
163
-
-
84896996219
-
-
American Cancer Society
-
American Cancer Society., www.cancer.org.
-
-
-
-
164
-
-
84928155780
-
-
Qiagen Notes, Frederic, MD, USA
-
Shaffer J, Schlumpberger M, Lader E. miRNA Profiling from Blood - Challenges and Recommendations. Qiagen Notes, Frederic, MD, USA, 1-10 (2012). www.qiagen.com
-
(2012)
MiRNA Profiling from Blood - Challenges and Recommendations
, pp. 1-10
-
-
Shaffer, J.1
Schlumpberger, M.2
Lader, E.3
-
165
-
-
84896948173
-
-
miRBase: the microRNA database
-
miRBase: the microRNA database. http://mirbase.org
-
-
-
-
166
-
-
84897011108
-
-
TargetScan Release 6.2
-
TargetScan Release 6.2 (2012). www.targetscan.org
-
(2012)
-
-
-
167
-
-
84896914403
-
-
Diana lab tools
-
Diana lab tools. www.diana.pcbi.upenn.edu
-
-
-
-
168
-
-
84896956088
-
-
miRNA
-
miRNA. www.microrna.org
-
-
-
-
169
-
-
84896903978
-
-
PicTar
-
PicTar. http://pictar.bio.nyu.edu
-
-
-
-
170
-
-
84896973864
-
-
Protein Evolution (Prof. Rob Russell)
-
Protein Evolution (Prof. Rob Russell). http://russell.embl-heidelberg.dr
-
-
-
-
171
-
-
84896944638
-
-
Swiss Institute of Bioinformatics
-
Swiss Institute of Bioinformatics. RNA regulatory networks. www.mirz.unibas.ch
-
RNA Regulatory Networks
-
-
-
172
-
-
84896968140
-
-
miRNA Targets by Weighting RISC-IP Enriched Parameters.
-
miRNA Targets by Weighting RISC-IP Enriched Parameters. http://146.189.76.171/query
-
-
-
-
173
-
-
84896936001
-
-
Segal Lab of computational biology
-
Segal Lab of computational biology. PITA catalogs of predicted microRNA targets. http://genie.weizmann.ac.il/pubs/mir07/ mir07-data.html
-
PITA Catalogs of Predicted MicroRNA Targets
-
-
-
174
-
-
84896919941
-
-
Welcome to the Frontpage
-
Welcome to the Frontpage. www.mld.dk/publicationnormfinder.htm
-
-
-
-
175
-
-
84896947361
-
-
The Comprehensive R Archive Network.
-
The Comprehensive R Archive Network. http://cran.r-project.org
-
-
-
-
176
-
-
84896970325
-
-
NCSS Statistical Software
-
NCSS Statistical Software. www.ncss.com
-
-
-
-
177
-
-
84896922911
-
-
RT2 Profiler PCR Array Data Analysis v3.5
-
RT2 Profiler PCR Array Data Analysis v3.5. http://pcrdataanalysis. sabiosciences.com, 2013.
-
(2013)
-
-
|