MicroRNAs and the regulation of cell death

Trends in Genetics

Volumn 20, Issue 12, 2004, Pages 617-624

  Xu, Peizhang ^a   Guo, Ming ^b   Hay, Bruce A ^a  

^a CALIFORNIA INSTITUTE OF TECHNOLOGY   (United States)

^b UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

APOPTOSIS INHIBITOR; CASPASE; MICRORNA; UNTRANSLATED RNA;

APOPTOSIS; CELL DEATH; CELL GROWTH; DROSOPHILA; ENZYME ACTIVITY; GENE FUNCTION; HUMAN; NONHUMAN; PRIORITY JOURNAL; PROTEIN FUNCTION; REVIEW; RNA TRANSCRIPTION;

ANIMALS; BASE SEQUENCE; CELL DEATH; CYCLINS; DATABASES, GENETIC; DROSOPHILA; DROSOPHILA PROTEINS; GENE EXPRESSION REGULATION; MAMMALS; MICRORNAS; MODELS, GENETIC; SIGNAL TRANSDUCTION;

ANIMALIA; MAMMALIA;

EID: 7444243756     PISSN: 01689525     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.tig.2004.09.010     Document Type: Review

References (61)

1. D.L. Vaux, and R.A. Flavell Apoptosis genes and autoimmunity Curr. Opin. Immunol. 12 2000 719 724
2. H.O. Fearnhead Getting back on track, or what to do when apoptosis is de-railed: recoupling oncogenes to the apoptotic machinery Cancer Biol. Ther. 3 2004 21 28
3. M.P. Mattson Apoptosis in neurodegenerative disorders Nature Reviews Mol. Cell Biol. 1 2000 120 129
4. D.P. Bartel MicroRNAs: genomics, biogenesis, mechanism, and function Cell 116 2004 281 297
5. E.C. Lai microRNAs: runts of the genome assert themselves Curr. Biol. 13 2003 R925 R936
6. K. Nakahara, and R.W. Carthew Expanding roles for miRNAs and siRNAs in cell regulation Curr. Opin. Cell Biol. 16 2004 127 133
7. P. Xu The Drosophila microRNA Mir-14 suppresses cell death and is required for normal fat metabolism Curr. Biol. 13 2003 790 795
8. J. Brennecke bantam encodes a developmentally regulated microRNA that controls cell proliferation and regulates the proapoptotic gene hid in Drosophila Cell 113 2003 25 36
9. V. Ambros microRNAs: tiny regulators with great potential Cell 107 2001 823 826
10. V. Schramke, and R. Allshire Those interfering little RNAs! Silencing and eliminating chromatin Curr. Opin. Genet. Dev. 14 2004 174 180
11. A. Khvorova Functional siRNAs and miRNAs exhibit strand bias Cell 115 2003 209 216
12. D.S. Schwarz Asymmetry in the assembly of the RNAi enzyme complex Cell 115 2003 199 208
13. A. Degterev A decade of caspases Oncogene 22 2003 8543 8567
14. B.A. Hay Understanding IAP function and regulation: a view from Drosophila Cell Death Differ. 7 2000 1045 1056
15. B.A. Hay Drosophila homologs of baculovirus inhibitor of apoptosis proteins function to block cell death Cell 83 1995 1253 1262
16. B.A. Hay P element insertion-dependent gene activation in the Drosophila eye Proc. Natl. Acad. Sci. U. S. A. 94 1997 5195 5200
17. S.Y. Vernooy Drosophila Bruce can potently suppress Rpr- and Grim-dependent but not Hid-dependent cell death Curr. Biol. 12 2002 1164 1168
18. M. Lagos-Quintana Identification of novel genes coding for small expressed RNAs Science 294 2001 853 858
19. R.H. Unger Lipotoxic diseases Annu. Rev. Med. 53 2002 319 336
20. M. Buszczak Mutations in the midway gene disrupt a Drosophila acyl coenzyme A:diacylglycerol acyltransferase Genetics 160 2002 1511 1518
21. D.R. Hipfner The bantam gene regulates Drosophila growth Genetics 161 2002 1527 1537
22. P. Rorth Systematic gain-of-function genetics in Drosophila Development 125 1998 1049 1057
23. D.R. Green, and G.I. Evan A matter of life and death Cancer Cell 1 2002 19 30
24. M.W. Jones-Rhoades, and D.P. Bartel Computational identification of plant microRNAs and their targets, including a stress-induced miRNA Mol. Cell 14 2004 787 799
25. J.G. Doench, and P.A. Sharp Specificity of microRNA target selection in translational repression Genes Dev. 18 2004 504 511
26. M. Kiriakidou A combined computational-experimental approach predicts human microRNA targets Genes Dev. 18 2004 1165 1178
27. B. Haley, and P.D. Zamore Kinetic analysis of the RNAi enzyme complex Nat. Struct. Mol. Biol. 11 2004 599 606
28. A.J. Enright MicroRNA targets in Drosophila Genome Biol. 5 2003 R1
29. A. Stark Identification of Drosophila microRNA targets PLoS Biol. 1 2003 397 409
30. B.P. Lewis Prediction of mammalian microRNA targets Cell 115 2003 787 798
31. N. Rajewsky, and N.D. Socci Computational identification of microRNA targets Dev. Biol. 267 2004 529 535
32. K.V. Morris Small interfering RNA-induced transcriptional gene silencing in human cells Science 305 2004 1289 1292
33. G. Hutvagner Sequence-specific inhibition of small RNA function PLoS Biol. 2 2004 1 11
34. G. Meister Sequence-specific inhibition of microRNA- and siRNA-induced RNA silencing RNA 10 2004 544 550
35. M.M. Metzstein Genetics of programmed cell death in C. elegans: past, present and future Trends Genet. 14 1998 410 416
36. A.C. Spradling Gene disruptions using P transposable elements: an integral component of the Drosophila genome project Proc. Natl. Acad. Sci. U. S. A. 92 1995 10824 10830
37. H.J. Bellen The BDGP gene disruption project: single transposon insertions associated with 40% of Drosophila genes Genetics 167 2004 761 781
38. S.Y. Vernooy Cell death regulation in Drosophila: conservation of mechanism and unique insights J. Cell Biol. 150 2000 F69 F76
39. V.K. Rajasekhar, and E.C. Holland Postgenomic global analysis of translational control induced by oncogenic signaling Oncogene 23 2004 3248 3264
40. M.T. McManus MicroRNAs and cancer Semin. Cancer Biol. 13 2003 253 258
41. M.Z. Michael Reduced accumulation of specific microRNAs in colorectal neoplasia Mol. Cancer Res. 1 2003 882 891
42. K. Bomsztyk hnRNP K: one protein multiple processes BioEssays 26 2004 629 638
43. G.A. Calin Frequent deletions and down-regulation of micro-RNA genes miR15 and miR16 at 13q14 in chronic lymphocytic leukemia Proc. Natl. Acad. Sci. U. S. A. 99 2002 15524 15529
44. B.E. Clurman, and W.S. Hayward Multiple proto-oncogene activations in avian leukosis virus-induced lymphomas: evidence for stage-specific events Mol. Cell. Biol. 9 1989 2657 2664
45. W. Tam bic, a novel gene activated by proviral insertions in avian leukosis virus-induced lymphomas, is likely to function through its noncoding RNA Mol. Cell. Biol. 17 1997 1490 1502
46. A. van den Berg High expression of B-cell receptor inducible gene BIC in all subtypes of Hodgkin lymphoma Genes Chromosomes Cancer 37 2003 20 28
47. M. Metzler High expression of precursor microRNA-155/BIC RNA in children with Burkitt lymphoma Genes Chromosomes Cancer 39 2004 167 169
48. W. Tam Avian bic, a gene isolated from a common retroviral site in avian leukosis virus-induced lymphomas that encodes a noncoding RNA, cooperates with c-myc in lymphomagenesis and erythroleukemogenesis J. Virol. 76 2002 4275 4286
49. G.A. Calin Human microRNA genes are frequently located at fragile sites and genomic regions involved in cancers Proc. Natl. Acad. Sci. U. S. A. 101 2004 2999 3004
50. G.M. Rubin Comparative genomics of the eukaryotes Science 287 2000 2204 2215
51. G.C. Liao Insertion site preferences of the P transposable element in Drosophila melanogaster Proc. Natl. Acad. Sci. U. S. A. 97 2000 3347 3351
52. C.Z. Chen MicroRNAs modulate hematopoietic lineage differentiation Science 303 2004 83 86
53. S. Saxena Small RNAs with imperfect match to endogenous mRNA repress translation. Implications for off-target activity of small inhibitory RNA in mammalian cells J. Biol. Chem. 278 2003 44312 44319
54. A.L. Jackson Expression profiling reveals off-target gene regulation by RNAi Nat. Biotechnol. 21 2003 635 637
55. M. Pal-Bhadra Heterochromatic silencing and HP1 localization in Drosophila are dependent on the RNAi machinery Science 303 2004 669 672
56. T. Kuwabara A small modulatory dsRNA specifies the fate of adult neural stem cells Cell 116 2004 779 793
57. Y. Shi Mechanisms of caspase activation and inhibition during apoptosis Mol. Cell 9 2002 459 470
58. T. Igaki Down-regulation of DIAP1 triggers a novel Drosophila cell death pathway mediated by Dark and DRONC J. Biol. Chem. 277 2002 23103 23106
59. I. Muro The Drosophila DIAP1 protein is required to prevent accumulation of a continuously generated, processed form of the apical caspase DRONC J. Biol. Chem. 277 2002 49644 49650
60. A. Rodriguez Unrestrained caspase-dependent cell death caused by loss of Diap1 function requires the Drosophila Apaf-1 homolog, Dark EMBO J. 21 2002 2189 2197
61. K.C. Zimmermann The role of ARK in stress-induced apoptosis in Drosophila cells J. Cell Biol. 156 2002 1077 1087