-
1
-
-
33644988716
-
Reconstructing an Ancestral Mammalian Immune Supercomplex from a Marsupial Major Histocompatibility Complex
-
Belov K, Deakin JE, Papenfuss AT, Baker ML, Melman SD, et al. (2006) Reconstructing an Ancestral Mammalian Immune Supercomplex from a Marsupial Major Histocompatibility Complex. PLoS Biol 4: 317-328.
-
(2006)
PLoS Biol
, vol.4
, pp. 317-328
-
-
Belov, K.1
Deakin, J.E.2
Papenfuss, A.T.3
Baker, M.L.4
Melman, S.D.5
-
2
-
-
0033613425
-
The chicken B locus is a minimal essential major histocompatibility complex
-
Kaufman J, Milne S, Gobel TW, Walker BA, Jacob JP, et al. (1999) The chicken B locus is a minimal essential major histocompatibility complex. Nature 401: 923-925.
-
(1999)
Nature
, vol.401
, pp. 923-925
-
-
Kaufman, J.1
Milne, S.2
Gobel, T.W.3
Walker, B.A.4
Jacob, J.P.5
-
3
-
-
27844495743
-
A genome-wide survey of Major Histocompatibility Complex (MHC) genes and their paralogues in zebrafish
-
Sambrook JG, Figueroa F, Beck S (2005) A genome-wide survey of Major Histocompatibility Complex (MHC) genes and their paralogues in zebrafish. BMC Genomics 6: 152.
-
(2005)
BMC Genomics
, vol.6
, pp. 152
-
-
Sambrook, J.G.1
Figueroa, F.2
Beck, S.3
-
4
-
-
0036955166
-
Comparative genomic analysis of the MHC: The evolution of class I duplication blocks, diversity and complexity from shark to man
-
DOI 10.1034/j.1600-065X.2002.19008.x
-
Kulski JK, Shiina T, Anzai T, Kohara S, Inoko H (2002) Comparative genomic analysis of the MHC: the evolution of class I duplication blocks, diversity and complexity from shark to man. Immunol Rev 190: 95-122. (Pubitemid 36071929)
-
(2002)
Immunological Reviews
, vol.190
, pp. 95-122
-
-
Kulski, J.K.1
Shiina, T.2
Anzai, T.3
Kohara, S.4
Inoko, H.5
-
5
-
-
44649104548
-
Evolutionary patterns of MHC class II B in owls and their implications for the understanding of avian MHC evolution
-
Burri R, Hirzel HN, Salamin N, Roulin A, Fumagalli L (2008) Evolutionary patterns of MHC class II B in owls and their implications for the understanding of avian MHC evolution. Mol Biol Evol 25: 1180-1191.
-
(2008)
Mol Biol Evol
, vol.25
, pp. 1180-1191
-
-
Burri, R.1
Hirzel, H.N.2
Salamin, N.3
Roulin, A.4
Fumagalli, L.5
-
7
-
-
36149000117
-
Characterization, polymorphism, and evolution of MHC class II B genes in birds of prey
-
DOI 10.1007/s00239-007-9033-9
-
Alcaide M, Edwards SV, Negro JJ (2007) Characterization, Polymorphism, and Evolution of MHC Class II B Genes in Birds of Prey. J Mol Evol 65: 541-554. (Pubitemid 350115436)
-
(2007)
Journal of Molecular Evolution
, vol.65
, Issue.5
, pp. 541-554
-
-
Alcaide, M.1
Edwards, S.V.2
Negro, J.J.3
-
9
-
-
0032426345
-
Histocompatibility complex loci of vertebrates
-
Hughes AL, Yeager M (1998) Histocompatibility complex loci of vertebrates. Annu Rev Genet 32: 415-435.
-
(1998)
Annu Rev Genet
, vol.32
, pp. 415-435
-
-
Hughes, A.L.1
Yeager, M.2
-
10
-
-
2442677820
-
Comparative genomic analysis of two avian (quail and chicken) MHC regions
-
Shiina T, Shimizu S, Hosomichi K, Kohara S, Watanabe S, et al. (2004) Comparative genomic analysis of two avian (quail and chicken) MHC regions. J Immunol 172: 6751-6763. (Pubitemid 38669112)
-
(2004)
Journal of Immunology
, vol.172
, Issue.11
, pp. 6751-6763
-
-
Shiina, T.1
Shimizu, S.2
Hosomichi, K.3
Kohara, S.4
Watanabe, S.5
Hanzawa, K.6
Beck, S.7
Kulski, J.K.8
Inoko, H.9
-
11
-
-
4444365344
-
The genomic sequence and comparative analysis of the rat major histocompatibility complex
-
DOI 10.1101/gr.1987704
-
Hurt P, Walter L, Sudbrak R, Klages S, Muller I, et al. (2004) The genomic sequence and comparative analysis of the rat major histocompatibility complex. Genome Res 14: 631-639. (Pubitemid 38500234)
-
(2004)
Genome Research
, vol.14
, Issue.4
, pp. 631-639
-
-
Hurt, P.1
Walter, L.2
Sudbrak, R.3
Klages, S.4
Muller, I.5
Shiina, T.6
Inoko, H.7
Lehrach, H.8
Gunther, E.9
Reinhardt, R.10
Himmelbauer, H.11
-
12
-
-
84888006031
-
Major Histocompatibility Complex (MHC) Genes
-
John Wiley & Sons, Ltd.
-
Kulski JK, Inoko H (2005) Major Histocompatibility Complex (MHC) Genes. Encyclopedia of Life Sciences: John Wiley & Sons, Ltd.
-
(2005)
Encyclopedia of Life Sciences
-
-
Kulski, J.K.1
Inoko, H.2
-
15
-
-
44249122817
-
Extensive polymorphism and geographical variation at a positively selected MHC class II B gene of the lesser kestrel (Falco naumanni)
-
DOI 10.1111/j.1365-294X.2008.03791.x
-
Alcaide M, Edwards SV, Negro JJ, Serrano D, Tella JL (2008) Extensive polymorphism and geographical variation at a positively selected MHC class II B gene of the lesser kestrel (Falco naumanni). Mol Ecol 17: 2652-2665. (Pubitemid 351724950)
-
(2008)
Molecular Ecology
, vol.17
, Issue.11
, pp. 2652-2665
-
-
Alcaide, M.1
Edwards, S.V.2
Negro, J.J.3
Serrano, D.4
Tella, J.L.5
-
16
-
-
77955861083
-
MHC evolution in three salmonid species: A comparison between class II alpha and beta genes
-
Gómez D, Conejers P, Marshall SH, Consuegra S (2010) MHC evolution in three salmonid species: a comparison between class II alpha and beta genes. Immunogenetics 62: 531-542.
-
(2010)
Immunogenetics
, vol.62
, pp. 531-542
-
-
Gómez, D.1
Conejers, P.2
Marshall, S.H.3
Consuegra, S.4
-
17
-
-
43149093122
-
Diversifying and Purifying Selection in the Peptide Binding Region of DRB in Mammals
-
Furlong RF, Yang Z (2008) Diversifying and Purifying Selection in the Peptide Binding Region of DRB in Mammals. J Mol Evol 66: 384-394.
-
(2008)
J Mol Evol
, vol.66
, pp. 384-394
-
-
Furlong, R.F.1
Yang, Z.2
-
18
-
-
0030845926
-
Comparative evolutionary rates of introns and exons in murine rodents
-
DOI 10.1007/PL00006211
-
Hughes AL, Yeager M (1997) Comparative evolutionary rates of introns and exons in murine rodents. J Mol Evol 45: 125-130. (Pubitemid 27323517)
-
(1997)
Journal of Molecular Evolution
, vol.45
, Issue.2
, pp. 125-130
-
-
Hughes, A.L.1
Yeager, M.2
-
19
-
-
0025366147
-
A simple genealogical structure of strongly balanced allelic lines and trans-species evolution of polymorphism
-
Takahata N (1990) A simple genealogical structure of strongly balanced allelic lines and trans-species evolution of polymorphism. Proc Natl Acad Sci USA 87: 2419-2423.
-
(1990)
Proc Natl Acad Sci USA
, vol.87
, pp. 2419-2423
-
-
Takahata, N.1
-
20
-
-
0023616527
-
Origin of major histocompatibility complex polymorphism: The trans-species hypothesis
-
Klein J (1987) Origin of major histocompatibility complex polymorphism: The trans-species hypothesis. Human Immunol 19: 155-162.
-
(1987)
Human Immunol
, vol.19
, pp. 155-162
-
-
Klein, J.1
-
21
-
-
67349172254
-
Characterization and evolution of MHC class II B genes in Galápagos marine iguanas (Amblyrhynchus cristatus)
-
Glaberman S, Moreno MA, Caccone A (2009) Characterization and evolution of MHC class II B genes in Galápagos marine iguanas (Amblyrhynchus cristatus). Dev Comp Immunol 33: 939-947.
-
(2009)
Dev Comp Immunol
, vol.33
, pp. 939-947
-
-
Glaberman, S.1
Moreno, M.A.2
Caccone, A.3
-
22
-
-
35248893027
-
Polymorphism of Exon 3 of MHC Class II B Gene in Chinese Alligator (Alligator sinensis)
-
DOI 10.1016/S1673-8527(07)60103-9, PII S1673852707601039
-
Liu H, Wu X, Yan P, Jiang Z (2007) Polymorphism of Exon 3 of MHC Class II B Gene in Chinese Alligator (Alligator sinensis). J Genet Genomics 34: 918-929. (Pubitemid 47562333)
-
(2007)
Journal of Genetics and Genomics
, vol.34
, Issue.10
, pp. 918-929
-
-
Liu, H.1
Wu, X.2
Yan, P.3
Jiang, Z.4
-
23
-
-
84895141224
-
Sequence variation at exon 2 of MHC class II B gene in Nile crocodile (Crocodylus niloticus)
-
Li E, Yan P, X W(2010) Sequence variation at exon 2 of MHC class II B gene in Nile crocodile (Crocodylus niloticus). Acta Laser Biology Sinica 19: 804-810.
-
(2010)
Acta Laser Biology Sinica
, vol.19
, pp. 804-810
-
-
Li, E.1
Yan, P.2
W, X.3
-
24
-
-
84865022771
-
Sequencing three crocodilian genomes to illuminate the evolution of archosaurs and amniotes
-
St John JA, Braun EL, Isberg SR, Miles LG, Chong AY, et al. (2012) Sequencing three crocodilian genomes to illuminate the evolution of archosaurs and amniotes. Genome Biol 13: 415.
-
(2012)
Genome Biol
, vol.13
, pp. 415
-
-
St John, J.A.1
Braun, E.L.2
Isberg, S.R.3
Miles, L.G.4
Chong, A.Y.5
-
25
-
-
34249810950
-
The spectrum of HLA-DQ and HLA-DR alleles, 2006: A listing correlating sequence and structure with function
-
DOI 10.1007/s00251-007-0224-8
-
Bondinas GP, Moustakas AK, Papadopoulos GK (2007) The spectrum of HLA-DQ and HLA-DR alleles, 2006: a listing correlating sequence and structure with function. Immunogenetics 59: 539-553. (Pubitemid 46850164)
-
(2007)
Immunogenetics
, vol.59
, Issue.7
, pp. 539-553
-
-
Bondinas, G.P.1
Moustakas, A.K.2
Papadopoulos, G.K.3
-
26
-
-
38549152415
-
Parasites and Parasitic Diseases of Reptiles
-
Jacobson ER, editor. Boca Raton, FL: CRC Press
-
Jacobson ER (2007) Parasites and Parasitic Diseases of Reptiles. In: Jacobson ER, editor. Infectious Diseases and Pathology of Reptiles. Boca Raton, FL: CRC Press.
-
(2007)
Infectious Diseases and Pathology of Reptiles
-
-
Jacobson, E.R.1
-
27
-
-
0025255468
-
Allelic genealogy under overdominant and frequency-dependent selection and polymorphism of major histocompatibility complex loci
-
Takahata N, Nei M (1990) Allelic genealogy under overdominant and frequency-dependent selection and polymorphism of major histocompatibility complex loci. Genetics 124: 967-978. (Pubitemid 20146073)
-
(1990)
Genetics
, vol.124
, Issue.4
, pp. 967-978
-
-
Takahata, N.1
Nei, M.2
-
28
-
-
80053985551
-
A time-calibrated species tree of Crocodylia reveals a recent radiation of the true crocodiles
-
Oaks JR (2011) A time-calibrated species tree of Crocodylia reveals a recent radiation of the true crocodiles. Evolution 65: 3285-3297.
-
(2011)
Evolution
, vol.65
, pp. 3285-3297
-
-
Oaks, J.R.1
-
29
-
-
0028354412
-
Structure and polymorphism of horse MHC class II DRB genes: Convergent evolution in the antigen binding site
-
Gustafsson K, Andersson L (1994) Structure and polymorphism of horse MHC class II DRB genes: convergent evolution in the antigen binding site. Immunogenetics 39: 355-358. (Pubitemid 24105046)
-
(1994)
Immunogenetics
, vol.39
, Issue.5
, pp. 355-358
-
-
Gustafsson, K.1
Andersson, L.2
-
30
-
-
0034066528
-
Convergent evolution of major histocompatibility complex molecules in humans and New World monkeys
-
Kriener K, O'hUigin C, Tichy H, Klein J (2000) Convergent evolution of major histocompatibility complex molecules in humans and New World monkeys. Immunogenetics 51: 169-178.
-
(2000)
Immunogenetics
, vol.51
, pp. 169-178
-
-
Kriener, K.1
O'Huigin, C.2
Tichy, H.3
Klein, J.4
-
31
-
-
34548699489
-
The Mhc class II of the Black grouse (Tetrao tetrix) consists of low numbers of B and Y genes with variable diversity and expression
-
DOI 10.1007/s00251-007-0234-6
-
Strand T, Westerdahl H, Höglund J, V Alatalo R, Siitari H (2007) The Mhc class II of the Black grouse (Tetrao tetrix) consists of low numbers of B and Y genes with variable diversity and expression. Immunogenetics 59: 725-734. (Pubitemid 47415562)
-
(2007)
Immunogenetics
, vol.59
, Issue.9
, pp. 725-734
-
-
Strand, T.1
Westerdahl, H.2
Hoglund, J.3
V, A.R.4
Siitari, H.5
-
32
-
-
20444389089
-
Conservation of promoter, coding and intronic regions of the nonclassical MHC class II DYA gene suggests evolution under functional constraints
-
DOI 10.1111/j.1365-2052.2005.01281.x
-
Ballingall KT, McKeever DJ (2005) Conservation of promoter, coding and intronic regions of the non-classical MHC class II DYA gene suggests evolution under functional constraints. Anim Genet 36: 237-239. (Pubitemid 40802081)
-
(2005)
Animal Genetics
, vol.36
, Issue.3
, pp. 237-239
-
-
Ballingall, K.T.1
McKeever, D.J.2
-
33
-
-
0030903641
-
HLA-DRB9 - Possible remnant of an ancient functional DRB subregion
-
Gongora R, Figueroa F, O'Huigin C, Klein J (1997) HLA-DRB9 - Possible Remnant of an Ancient Functional DRB Subregion. Scand J Immunol 45: 504-510. (Pubitemid 27198711)
-
(1997)
Scandinavian Journal of Immunology
, vol.45
, Issue.5
, pp. 504-510
-
-
Gongora, R.1
Figueroa, F.2
O'Huigin, C.3
Klein, J.4
-
34
-
-
0029067418
-
Biochemical and Molecular Characterization of Rhesus Monkey Major Histocompatibility Complex Class II DR
-
Lekutis C, Letvin NL (1995) Biochemical and Molecular Characterization of Rhesus Monkey Major Histocompatibility Complex Class II DR. Hum Immunol 43: 72-80.
-
(1995)
Hum Immunol
, vol.43
, pp. 72-80
-
-
Lekutis, C.1
Letvin, N.L.2
-
35
-
-
77949891502
-
Study of cynomolgus monkey (Macaca fascicularis) DRA polymorphism in four populations
-
Aarnink A, Estrade L, Apoil P-A, Kita YF, Saitou N, et al. (2010) Study of cynomolgus monkey (Macaca fascicularis) DRA polymorphism in four populations. Immunogenetics 62: 123-136.
-
(2010)
Immunogenetics
, vol.62
, pp. 123-136
-
-
Aarnink, A.1
Estrade, L.2
Apoil, P.-A.3
Kita, Y.F.4
Saitou, N.5
-
37
-
-
27744606052
-
The importance of immune gene variability (MHC) in evolutionary ecology and conservation
-
Sommer S (2005) The importance of immune gene variability (MHC) in evolutionary ecology and conservation. Front Zool 2: 16-33.
-
(2005)
Front Zool
, vol.2
, pp. 16-33
-
-
Sommer, S.1
-
38
-
-
33644998297
-
The evolutionary ecology of the major histocompatibility complex
-
Piertney SB, Oliver MK (2006) The evolutionary ecology of the major histocompatibility complex. Heredity 96: 7-21.
-
(2006)
Heredity
, vol.96
, pp. 7-21
-
-
Piertney, S.B.1
Oliver, M.K.2
-
39
-
-
0042208362
-
Effect of recombination on the accuracy of the likelihood method for detecting positive selection at amino acid sites
-
Anisimova M, Nielsen R, Yang Z (2003) Effect of recombination on the accracy of the likelihood method for detecting positive selection at amino acid sites. Genetics 164: 1229-1236. (Pubitemid 36935693)
-
(2003)
Genetics
, vol.164
, Issue.3
, pp. 1229-1236
-
-
Anisimova, M.1
Nielsen, R.2
Yang, Z.3
-
40
-
-
84862260803
-
Colonizing the world in spite of reduced MHC variation
-
Gangoso L, Alcaide M, Grande JM, Muñoz J, Talbot SL, et al. (2012) Colonizing the world in spite of reduced MHC variation. J Evol Biol 25: 1438-1447.
-
(2012)
J Evol Biol
, vol.25
, pp. 1438-1447
-
-
Gangoso, L.1
Alcaide, M.2
Grande, J.M.3
Muñoz, J.4
Talbot, S.L.5
-
41
-
-
78650048171
-
Evolutionary rates of mitochondrial genomes correspond to diversification rates and to contemporary species richness in birds and reptiles
-
Eo SH, DeWoody JA (2010) Evolutionary rates of mitochondrial genomes correspond to diversification rates and to contemporary species richness in birds and reptiles. Proc R Soc Lond B Biol Sci 277: 3587-3592.
-
(2010)
Proc R Soc Lond B Biol Sci
, vol.277
, pp. 3587-3592
-
-
Eo, S.H.1
DeWoody, J.A.2
-
42
-
-
34547465760
-
Calibration choice, rate smoothing, and the pattern of tetrapod diversification according to the long nuclear gene RAG-1
-
DOI 10.1080/10635150701477825, PII 780704360
-
Hugall AF, Foster R, Lee MSY (2007) Calibration choice, rate smoothing, and the pattern of tetrapod diversification according to the long nuclear gene RAG-1. Syst Biol 56: 543-563. (Pubitemid 47171630)
-
(2007)
Systematic Biology
, vol.56
, Issue.4
, pp. 543-563
-
-
Hugall, A.F.1
Foster, R.2
Lee, M.S.Y.3
-
43
-
-
4644300968
-
Analysis of microsatellites and parentage testing in saltwater crocodiles
-
DOI 10.1093/jhered/esh067
-
Isberg SR, Chen Y, Barker SG, Moran C (2004) Analysis of Microsatellites and Parentage Testing in Saltwater Crocodiles. J Hered 95: 445-449. (Pubitemid 39304781)
-
(2004)
Journal of Heredity
, vol.95
, Issue.5
, pp. 445-449
-
-
Isberg, S.R.1
Chen, Y.2
Barker, S.G.3
Moran, C.4
-
44
-
-
0037115665
-
Microsatellite DNA analyses support an east-west phylogeographic split of American alligator populations
-
DOI 10.1002/jez.10189
-
Davis LM, Glenn TC, Strickland DC, Guillette LJ, Elsey RM, et al. (2002) Microsatellite DNA analyses support an east-west phylogeographic split of American alligator populations. J Exp Zool 294: 352-372. (Pubitemid 36035061)
-
(2002)
Journal of Experimental Zoology
, vol.294
, Issue.4
, pp. 352-372
-
-
Davis, L.M.1
Glenn, T.C.2
Strickland, D.C.3
Guillette Jr., L.J.4
Elsey, R.M.5
Rhodes, W.E.6
Dessauer, H.C.7
Sawyer, R.H.8
-
45
-
-
57749168327
-
Macrogeographic Genetic Variation in Broad-Snouted Caiman (Caiman latirostris)
-
Villela PMS, Coutinho LL, Piña CI, Verdade LM (2008) Macrogeographic Genetic Variation in Broad-Snouted Caiman (Caiman latirostris). J Exp Zool 309A: 628-636.
-
(2008)
J Exp Zool
, vol.309 A
, pp. 628-636
-
-
Villela, P.M.S.1
Coutinho, L.L.2
Piña, C.I.3
Verdade, L.M.4
-
46
-
-
84867856648
-
MHC class I of saltwater crocodiles (Crocodylus porosus): Polymorphism and balancing selection
-
Jaratlerdsiri W, Isberg SR, Higgins DP, Gongora J (2012) MHC class I of saltwater crocodiles (Crocodylus porosus): polymorphism and balancing selection. Immunogenetics 64: 825-838.
-
(2012)
Immunogenetics
, vol.64
, pp. 825-838
-
-
Jaratlerdsiri, W.1
Isberg, S.R.2
Higgins, D.P.3
Gongora, J.4
-
47
-
-
0034082410
-
Nonclassical MHC class II molecules
-
DOI 10.1146/annurev.immunol.18.1.113
-
Alfonso C, Karlsson L (2000) Nonclassical MHC class II molecules. Annu Rev Immunol 18: 113-142. (Pubitemid 30365376)
-
(2000)
Annual Review of Immunology
, vol.18
, pp. 113-142
-
-
Alfonso, C.1
Karlsson, L.2
-
48
-
-
1542283573
-
The DY genes of the cattle MHC: Expression and comparative analysis of an unusual class II MHC gene pair
-
DOI 10.1007/s00251-004-0641-x
-
Ballingall KT, Ellis SA, MacHugh ND, Archibald SD, McKeever DJ (2004) The DY genes of the cattle MHC: expression and comparative analysis of an unusual class II MHC gene pair. Immunogenetics 55: 748-755. (Pubitemid 38316680)
-
(2004)
Immunogenetics
, vol.55
, Issue.11
, pp. 748-755
-
-
Ballingall, K.T.1
Ellis, S.A.2
MacHugh, N.D.3
Archibald, S.D.4
McKeever, D.J.5
-
49
-
-
0025580511
-
Partial nucleotide sequence of a novel bovine major histocompatibility complex class II beta chain gene, BoLA-DIB
-
Stone RT, Muggli-Cockett NE (1990) Partial nucleotide sequence of a novel bovine major histocompatibility complex class II beta chain gene, BoLA-DIB. Anim Genet 21: 353-360.
-
(1990)
Anim Genet
, vol.21
, pp. 353-360
-
-
Stone, R.T.1
Muggli-Cockett, N.E.2
-
50
-
-
77952953983
-
Defining the turkey MHC: Sequence and genes of the B locus
-
Chaves LD, Krueth SB, Reed KM (2009) Defining the turkey MHC: sequence and genes of the B locus. J Immunol 183: 6530-6537.
-
(2009)
J Immunol
, vol.183
, pp. 6530-6537
-
-
Chaves, L.D.1
Krueth, S.B.2
Reed, K.M.3
-
51
-
-
37249030834
-
Is evolvability evolvable?
-
Pigliucci M (2008) Is evolvability evolvable? Nat Rev Genet 9: 75-82.
-
(2008)
Nat Rev Genet
, vol.9
, pp. 75-82
-
-
Pigliucci, M.1
-
53
-
-
3142731513
-
Gene duplication and gene conversion in class II MHC genes of New Zealand robins (Petroicidae)
-
Miller HC, Lambert DM (2004) Gene duplication and gene conversion in class II MHC genes of New Zealand robins (Petroicidae). Immunogenetics 56: 178-191. (Pubitemid 38916322)
-
(2004)
Immunogenetics
, vol.56
, Issue.3
, pp. 178-191
-
-
Miller, H.C.1
Lambert, D.M.2
-
54
-
-
0036241218
-
The evolution of the major histocompatibility complex in birds
-
Hess CM, Edwards SV (2002) The evolution of the major histocompatibility complex in birds. BioScience 52: 423-431. (Pubitemid 34458435)
-
(2002)
BioScience
, vol.52
, Issue.5
, pp. 423-431
-
-
Hess, C.M.1
Edwards, S.V.2
-
55
-
-
84891827009
-
Evolution of MHC class I in the Order Crocodylia
-
Jaratlerdsiri W, Isberg SR, Higgins DP, Ho SY, Salomonsen J, et al. (2014) Evolution of MHC class I in the Order Crocodylia. Immunogenetics 66: 53-65.
-
(2014)
Immunogenetics
, vol.66
, pp. 53-65
-
-
Jaratlerdsiri, W.1
Isberg, S.R.2
Higgins, D.P.3
Ho, S.Y.4
Salomonsen, J.5
-
56
-
-
0028702002
-
Evolutionary conservation of MHC class I and class II molecules - Different yet the same
-
Kaufman J, Salomonsen J, Flajnik MF (1994) Evolutionary conservation of MHC class I and class II molecules-different yet the same. Semin Immunol 6: 411-424. (Pubitemid 124001537)
-
(1994)
Seminars in Immunology
, vol.6
, Issue.6
, pp. 411-424
-
-
Kaufman, J.1
Salomonsen, J.2
Flajnik, M.3
-
57
-
-
67649305092
-
Cross-species amplification of microsatellites in crocodilians: Assessment and applications for the future
-
Miles LG, Lance SL, Isberg SR, Moran C, Glenn TC (2009) Cross-species amplification of microsatellites in crocodilians: assessment and applications for the future. Conserv Genet 10: 935-954.
-
(2009)
Conserv Genet
, vol.10
, pp. 935-954
-
-
Miles, L.G.1
Lance, S.L.2
Isberg, S.R.3
Moran, C.4
Glenn, T.C.5
-
58
-
-
70349278403
-
Distribution of endogenous retroviruses in crocodilians
-
Jaratlerdsiri W, Rodríguez-Zárate CJ, Isberg SR, Damayanti CS, Miles LG, et al. (2009) Distribution of endogenous retroviruses in crocodilians. J Virol 83: 10305-10308.
-
(2009)
J Virol
, vol.83
, pp. 10305-10308
-
-
Jaratlerdsiri, W.1
Rodríguez-Zárate, C.J.2
Isberg, S.R.3
Damayanti, C.S.4
Miles, L.G.5
-
59
-
-
0035110484
-
Independent origin of functional MHC class II genes in humans and new world monkeys
-
Kriener K, O'huigin C, Klein J (2001) Independent origin of functional MHC class II genes in humans and new world monkeys. Hum Immunol 62: 1-14.
-
(2001)
Hum Immunol
, vol.62
, pp. 1-14
-
-
Kriener, K.1
O'Huigin, C.2
Klein, J.3
-
60
-
-
0028922904
-
The Expressed Class II a-Chain Genes of the Marsupial Major Histocompatibility Complex Belong to Eutherian Mammal Gene Families
-
Slade RW, Mayer WE (1995) The Expressed Class II a-Chain Genes of the Marsupial Major Histocompatibility Complex Belong to Eutherian Mammal Gene Families. Mol Biol Evol 12: 441-450.
-
(1995)
Mol Biol Evol
, vol.12
, pp. 441-450
-
-
Slade, R.W.1
Mayer, W.E.2
-
61
-
-
79955952202
-
Adaptive molecular evolution of the Major Histocompatibility Complex genes, DRA and DQA, in the genus Equus
-
Kamath PL, Getz WM (2011) Adaptive molecular evolution of the Major Histocompatibility Complex genes, DRA and DQA, in the genus Equus. BMC Evol Biol 11: 128.
-
(2011)
BMC Evol Biol
, vol.11
, pp. 128
-
-
Kamath, P.L.1
Getz, W.M.2
-
62
-
-
77951973196
-
A 454 multiplex sequencing method for rapid and reliable genotyping of highly polymorphic genes in large-scale studies
-
Galan M, Guivier E, Caraux G, Charbonnel N, Cosson JF (2010) A 454 multiplex sequencing method for rapid and reliable genotyping of highly polymorphic genes in large-scale studies. BMC Genomics 11: 296.
-
(2010)
BMC Genomics
, vol.11
, pp. 296
-
-
Galan, M.1
Guivier, E.2
Caraux, G.3
Charbonnel, N.4
Cosson, J.F.5
-
63
-
-
0029583058
-
Dynamics of Mhc evolution in birds and crocodilians: Amplification of class II genes with degenerate primers
-
Edwards SV, Grahn M, Potts WK (1995) Dynamics of MHC evolution in birds and crocodilians: amplification of class II genes with degenerate primers. Mol Ecol 4: 719-729. (Pubitemid 3012626)
-
(1995)
Molecular Ecology
, vol.4
, Issue.6
, pp. 719-729
-
-
Edwards, S.V.1
Grahn, M.2
Potts, W.K.3
-
64
-
-
77951921954
-
Effects of an MHC-DRB genotype and allele number on the load of gut parasites in the bank vole Myodes glareolus
-
Kloch A, Babik W, Bajer A, Siński E, Radwan J (2010) Effects of an MHC-DRB genotype and allele number on the load of gut parasites in the bank vole Myodes glareolus. Mol Ecol 19: 255-265.
-
(2010)
Mol Ecol
, vol.19
, pp. 255-265
-
-
Kloch, A.1
Babik, W.2
Bajer, A.3
Siński, E.4
Radwan, J.5
-
65
-
-
77954057688
-
Ancestral polymorphism in exon 2 of bluethroat (Luscinia svecica) MHC class II B genes
-
Anmarkrud JA, Johnsen A, Bachmann L, Lifjeld JT (2010) Ancestral polymorphism in exon 2 of bluethroat (Luscinia svecica) MHC class II B genes. J Evol Biol 23: 1206-1217.
-
(2010)
J Evol Biol
, vol.23
, pp. 1206-1217
-
-
Anmarkrud, J.A.1
Johnsen, A.2
Bachmann, L.3
Lifjeld, J.T.4
-
66
-
-
0025276271
-
Nomenclature for the major histocompatibility complexes of different species: A proposal
-
Klein J, Bontrop RE, Dawkins RL, Erlich HA, Gyllensten UB, et al. (1990) Nomenclature for the major histocompatibility complexes of different species: a proposal. Immunogenetics 31: 217-219. (Pubitemid 20132749)
-
(1990)
Immunogenetics
, vol.31
, Issue.4
, pp. 217-219
-
-
Klein, J.1
Bontrop, R.E.2
Dawkins, R.L.3
Erlich, H.A.4
Gyllensten, U.B.5
Heise, E.R.6
Jones, P.P.7
Parham, P.8
Wakeland, E.K.9
Watkins, D.I.10
-
67
-
-
34547781750
-
MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0
-
DOI 10.1093/molbev/msm092
-
Tamura K, Dudley J, Nei M, Kumar S (2007) MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0. Mol Biol Evol 24: 1596-1599. (Pubitemid 47236692)
-
(2007)
Molecular Biology and Evolution
, vol.24
, Issue.8
, pp. 1596-1599
-
-
Tamura, K.1
Dudley, J.2
Nei, M.3
Kumar, S.4
-
68
-
-
3042666256
-
MUSCLE: Multiple sequence alignment with high accuracy and high throughput
-
Edgar RC (2004) MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res 32: 1792-1797.
-
(2004)
Nucleic Acids Res
, vol.32
, pp. 1792-1797
-
-
Edgar, R.C.1
-
69
-
-
65649117685
-
DnaSP v5: A software for comprehensive analysis of DNA polymorphism data
-
Librado P, Rozas J (2009) DnaSP v5: A software for comprehensive analysis of DNA polymorphism data. Bioinformatics 25: 1451-1452.
-
(2009)
Bioinformatics
, vol.25
, pp. 1451-1452
-
-
Librado, P.1
Rozas, J.2
-
70
-
-
7044226335
-
Evolution and trans-species polymorphism of MHC class IIbeta genes in cyprinid fish
-
DOI 10.1016/j.fsi.2004.07.004, PII S1050464804000853
-
Ottová E, Šimková A, Martin J-F, de Bellocq JG, Gelnar M, et al. (2005) Evolution and trans-species polymorphism of MHC class IIβ genes in cyprinid fish. Fish Shellfish Immunol 18: 199-222. (Pubitemid 39415881)
-
(2005)
Fish and Shellfish Immunology
, vol.18
, Issue.3
, pp. 199-222
-
-
Ottova, E.1
Simkova, A.2
Martin, J.-F.3
Gouy, D.B.J.4
Gelnar, M.5
Allienne, J.-F.6
Morand, S.7
-
71
-
-
34548396076
-
MHC, TSP and the Origin of Species: From Immunogenetics to Evolutionary Genetics
-
Klein J, Sato A, Nikolaidis N (2007) MHC, TSP and the Origin of Species: From Immunogenetics to Evolutionary Genetics. Annu Rev Genet 41: 281-304.
-
(2007)
Annu Rev Genet
, vol.41
, pp. 281-304
-
-
Klein, J.1
Sato, A.2
Nikolaidis, N.3
-
72
-
-
33645229840
-
Estimating Diversifying Selection and Functional Constraint in the Presence of Recombination
-
Wilson DJ, McVean G (2006) Estimating Diversifying Selection and Functional Constraint in the Presence of Recombination. Genetics 172: 1411-1425.
-
(2006)
Genetics
, vol.172
, pp. 1411-1425
-
-
Wilson, D.J.1
McVean, G.2
-
73
-
-
0842310835
-
Intense and highly localized gene conversion activity in human meiotic crossover hot spots
-
DOI 10.1038/ng1287
-
Jeffreys A, May C (2004) Intense and highly localized gene conversion activity in human meiotic crossover hot spots. Nature 36: 151-156. (Pubitemid 38174373)
-
(2004)
Nature Genetics
, vol.36
, Issue.2
, pp. 151-156
-
-
Jeffreys, A.J.1
May, C.A.2
-
75
-
-
13444251528
-
RDP2: Recombination detection and analysis from sequence alignments
-
DOI 10.1093/bioinformatics/bth490
-
Martin DP, Williamson C, Posada D (2005) RDP2: recombination detection and analysis from sequence alignments. Bioinformatics 21: 260-262. (Pubitemid 40202028)
-
(2005)
Bioinformatics
, vol.21
, Issue.2
, pp. 260-262
-
-
Martin, D.P.1
Williamson, C.2
Posada, D.3
-
76
-
-
0242578620
-
A Simple, Fast, and Accurate Algorithm to Estimate Large Phylogenies by Maximum Likelihood
-
DOI 10.1080/10635150390235520
-
Guindon S, Gascuel O (2003) A simple, fast and accurate algorithm to estimate large phylogenies by maximum likelihood. Syst Biol 52: 696-704. (Pubitemid 37365050)
-
(2003)
Systematic Biology
, vol.52
, Issue.5
, pp. 696-704
-
-
Guindon, S.1
Gascuel, O.2
-
77
-
-
38649110663
-
BEAST: Bayesian evolutionary analysis by sampling trees
-
Drummond AJ, Rambaut A (2007) BEAST: Bayesian evolutionary analysis by sampling trees. BMC Evol Biol 7: 214.
-
(2007)
BMC Evol Biol
, vol.7
, pp. 214
-
-
Drummond, A.J.1
Rambaut, A.2
-
78
-
-
0742296788
-
Maximum-Likelihood Analysis Using TREE-PUZZLE
-
Baxevanis AD, Davison DB, Page RDM, Stormo G, Stein L, editors. New York: Wiley and Sons
-
Schmidt HA, von Haeseler A (2003) Maximum-Likelihood Analysis Using TREE-PUZZLE. In: Baxevanis AD, Davison DB, Page RDM, Stormo G, Stein L, editors. Current Protocols in Bioinformatics. New York: Wiley and Sons. 25093-25097.
-
(2003)
Current Protocols in Bioinformatics
, pp. 25093-25097
-
-
Schmidt, H.A.1
Von Haeseler, A.2
-
79
-
-
33645816587
-
Assessment of methods for amino acid matrix selection and their use on empirical data shows that ad hoc assumptions for choice of matrix are not justified
-
Keane TM, Creevey CJ, Pentony MM, Naughton TJ, O McInerney J (2006) Assessment of methods for amino acid matrix selection and their use on empirical data shows that ad hoc assumptions for choice of matrix are not justified. BMC Evol Biol 6: 29-45.
-
(2006)
BMC Evol Biol
, vol.6
, pp. 29-45
-
-
Keane, T.M.1
Creevey, C.J.2
Pentony, M.M.3
Naughton, T.J.4
O McInerney, J.5
-
80
-
-
0000120766
-
Estimating the dimension of a model
-
Schwarz G (1978) Estimating the dimension of a model. Ann Stat 6: 461-464.
-
(1978)
Ann Stat
, vol.6
, pp. 461-464
-
-
Schwarz, G.1
-
81
-
-
0016355478
-
A new look at the statistical model identification
-
Akaike H (1974) A new look at the statistical model identification. IEEE Trans Aut Control 19: 716-723.
-
(1974)
IEEE Trans Aut Control
, vol.19
, pp. 716-723
-
-
Akaike, H.1
|