메뉴 건너뛰기




Volumn 52, Issue 2, 2014, Pages 89-98

To peep into Pif1 helicase: Multifaceted all the way from genome stability to repair-associated DNA synthesis

Author keywords

genome stability; Pif1 helicase; recombination; replication; Saccharomyces cerevisiae

Indexed keywords

DNA HELICASE; FUNGAL DNA; PIF1 PROTEIN, S CEREVISIAE; SACCHAROMYCES CEREVISIAE PROTEIN;

EID: 84893547077     PISSN: 12258873     EISSN: 19763794     Source Type: Journal    
DOI: 10.1007/s12275-014-3524-3     Document Type: Review
Times cited : (26)

References (99)
  • 1
    • 0017113549 scopus 로고
    • Enzymic unwinding of DNA. 2. Chain separation by an ATP-dependent DNA unwinding enzyme
    • Abdel-Monem, M., Dürwald, H., and Hoffmann-Berling, H. 1976. Enzymic unwinding of DNA. 2. Chain separation by an ATP-dependent DNA unwinding enzyme. Eur. J. Biochem. 65, 441-449.
    • (1976) Eur. J. Biochem. , vol.65 , pp. 441-449
    • Abdel-Monem, M.1    Dürwald, H.2    Hoffmann-Berling, H.3
  • 3
    • 33751237066 scopus 로고    scopus 로고
    • The S. cerevisiae Rrm3p DNA helicase moves with the replication fork and affects replication of all yeast chromosomes
    • Azvolinsky, A., Dunaway, S., Torres, J. Z., Bessler, J. B., and Zakian, V. A. 2006. The S. cerevisiae Rrm3p DNA helicase moves with the replication fork and affects replication of all yeast chromosomes. Genes Dev. 20, 3104-3116.
    • (2006) Genes Dev. , vol.20 , pp. 3104-3116
    • Azvolinsky, A.1    Dunaway, S.2    Torres, J.Z.3    Bessler, J.B.4    Zakian, V.A.5
  • 4
    • 0035954737 scopus 로고    scopus 로고
    • RPA governs endonuclease switching during processing of Okazaki fragments in eukaryotes
    • Bae, S. H., Bae, K. H., Kim, J. A., and Seo, Y. S. 2001. RPA governs endonuclease switching during processing of Okazaki fragments in eukaryotes. Nature412, 456-461.
    • (2001) Nature , vol.412 , pp. 456-461
    • Bae, S.H.1    Bae, K.H.2    Kim, J.A.3    Seo, Y.S.4
  • 5
    • 0032500542 scopus 로고    scopus 로고
    • Dna2 of Saccharomyces cerevisiae possesses a single-stranded DNA-specific endonuclease activity that is able to act on double-stranded DNA in the presence of ATP
    • Bae, S. H., Choi, E., Lee, K. H., Park, J. S., Lee, S. H., and Seo, Y. S. 1998. Dna2 of Saccharomyces cerevisiae possesses a single-stranded DNA-specific endonuclease activity that is able to act on double-stranded DNA in the presence of ATP. J. Biol. Chem. 273, 26880-26890.
    • (1998) J. Biol. Chem. , vol.273 , pp. 26880-26890
    • Bae, S.H.1    Choi, E.2    Lee, K.H.3    Park, J.S.4    Lee, S.H.5    Seo, Y.S.6
  • 6
    • 0031054051 scopus 로고    scopus 로고
    • Enzymes and reactions at the eukaryotic DNA replication fork
    • Bambara, R. A., Murante, R. S., and Henricksen, L. A. 1997. Enzymes and reactions at the eukaryotic DNA replication fork. J. Biol. Chem. 272, 4647-4650.
    • (1997) J. Biol. Chem. , vol.272 , pp. 4647-4650
    • Bambara, R.A.1    Murante, R.S.2    Henricksen, L.A.3
  • 7
    • 77957259274 scopus 로고    scopus 로고
    • DNA binding induces dimerization of Saccharomyces cerevisiae Pif1
    • Barranco-Medina, S. and Galletto, R. 2010. DNA binding induces dimerization of Saccharomyces cerevisiae Pif1. Biochemistry49, 8445-8454.
    • (2010) Biochemistry , vol.49 , pp. 8445-8454
    • Barranco-Medina, S.1    Galletto, R.2
  • 9
    • 0035252650 scopus 로고    scopus 로고
    • The Pif1p subfamily of helicases: region-specific DNA helicases?
    • Bessler, J. B., Torredagger, J. Z., and Zakian, V. A. 2001. The Pif1p subfamily of helicases: region-specific DNA helicases? Trends Cell Biol. 11, 60-65.
    • (2001) Trends Cell Biol. , vol.11 , pp. 60-65
    • Bessler, J.B.1    Torredagger, J.Z.2    Zakian, V.A.3
  • 10
    • 10844222498 scopus 로고    scopus 로고
    • The amino terminus of the Saccharomyces cerevisiae DNA helicase Rrm3p modulates protein function altering replication and checkpoint activity
    • Bessler, J. B. and Zakian, V. A. 2004. The amino terminus of the Saccharomyces cerevisiae DNA helicase Rrm3p modulates protein function altering replication and checkpoint activity. Genetics168, 1205-1218.
    • (2004) Genetics , vol.168 , pp. 1205-1218
    • Bessler, J.B.1    Zakian, V.A.2
  • 11
    • 79959272474 scopus 로고    scopus 로고
    • The Pif1 family in prokaryotes: what are our helicases doing in your bacteria?
    • Bochman, M. L., Judge, C. P., and Zakian, V. A. 2011. The Pif1 family in prokaryotes: what are our helicases doing in your bacteria? Mol. Biol. Cell22, 1955-1959.
    • (2011) Mol. Biol. Cell , vol.22 , pp. 1955-1959
    • Bochman, M.L.1    Judge, C.P.2    Zakian, V.A.3
  • 12
    • 84867744921 scopus 로고    scopus 로고
    • DNA secondary structures: stability and function of G-quadruplex structures
    • Bochman, M. L., Paeschke, K., and Zakian, V. A. 2012. DNA secondary structures: stability and function of G-quadruplex structures. Nat. Rev. Genet. 13, 770-780.
    • (2012) Nat. Rev. Genet. , vol.13 , pp. 770-780
    • Bochman, M.L.1    Paeschke, K.2    Zakian, V.A.3
  • 13
    • 76749129611 scopus 로고    scopus 로고
    • Unwinding the functions of the Pif1 family helicases
    • Bochman, M. L., Sabouri, N., and Zakian, V. A. 2010. Unwinding the functions of the Pif1 family helicases. DNA Repair (Amst)9, 237-249.
    • (2010) DNA Repair (Amst) , vol.9 , pp. 237-249
    • Bochman, M.L.1    Sabouri, N.2    Zakian, V.A.3
  • 14
    • 27744445335 scopus 로고    scopus 로고
    • The yeast Pif1p helicase removes telomerase from telomeric DNA
    • Boule, J. B., Vega, L. R., and Zakian, V. A. 2005. The yeast Pif1p helicase removes telomerase from telomeric DNA. Nature438, 57-61.
    • (2005) Nature , vol.438 , pp. 57-61
    • Boule, J.B.1    Vega, L.R.2    Zakian, V.A.3
  • 15
    • 34848908787 scopus 로고    scopus 로고
    • The yeast Pif1p DNA helicase preferentially unwinds RNA-DNA substrates
    • Boule, J. B. and Zakian, V. A. 2007. The yeast Pif1p DNA helicase preferentially unwinds RNA-DNA substrates. Nucleic Acids Res. 35, 5809-5818.
    • (2007) Nucleic Acids Res. , vol.35 , pp. 5809-5818
    • Boule, J.B.1    Zakian, V.A.2
  • 16
    • 33645215616 scopus 로고    scopus 로고
    • Evidence suggesting that Pif1 helicase functions in DNA replication with the Dna2 helicase/nuclease and DNA polymerase δ
    • Budd, M. E., Reis, C. C., Smith, S., Myung, K., and Campbell, J. L. 2006. Evidence suggesting that Pif1 helicase functions in DNA replication with the Dna2 helicase/nuclease and DNA polymerase δ. Mol. Cell. Biol. 26, 2490-2500.
    • (2006) Mol. Cell. Biol. , vol.26 , pp. 2490-2500
    • Budd, M.E.1    Reis, C.C.2    Smith, S.3    Myung, K.4    Campbell, J.L.5
  • 17
    • 0026339970 scopus 로고
    • Initiation of simian virus 40 DNA synthesis in vitro
    • Bullock, P. A., Seo, Y. S., and Hurwitz, J. 1991. Initiation of simian virus 40 DNA synthesis in vitro. Mol. Cell. Biol. 11, 2350-2361.
    • (1991) Mol. Cell. Biol. , vol.11 , pp. 2350-2361
    • Bullock, P.A.1    Seo, Y.S.2    Hurwitz, J.3
  • 18
    • 78049298053 scopus 로고    scopus 로고
    • G-quadruplex DNA sequences are evolutionarily conserved and associated with distinct genomic features in Saccharomyces cerevisiae
    • Capra, J. A., Paeschke, K., Singh, M., and Zakian, V. A. 2010. G-quadruplex DNA sequences are evolutionarily conserved and associated with distinct genomic features in Saccharomyces cerevisiae. PLoS Comput. Biol. 6, e1000861.
    • (2010) PLoS Comput. Biol. , vol.6
    • Capra, J.A.1    Paeschke, K.2    Singh, M.3    Zakian, V.A.4
  • 20
    • 33947137756 scopus 로고    scopus 로고
    • The role of Pif1p, a DNA helicase in Saccharomyces cerevisiae, in maintaining mitochondrial DNA
    • Cheng, X., Dunaway, S., and Ivessa, A. S. 2007. The role of Pif1p, a DNA helicase in Saccharomyces cerevisiae, in maintaining mitochondrial DNA. Mitochondrion7, 211-222.
    • (2007) Mitochondrion , vol.7 , pp. 211-222
    • Cheng, X.1    Dunaway, S.2    Ivessa, A.S.3
  • 21
    • 84856801304 scopus 로고    scopus 로고
    • A genomewide screen for suppressors of Alu-mediated rearrangements reveals a role for PIF1
    • Chisholm, K. M., Aubert, S. D., Freese, K. P., Zakian, V. A., King, M. C., and Welcsh, P. L. 2012. A genomewide screen for suppressors of Alu-mediated rearrangements reveals a role for PIF1. PLoS One7, e30748.
    • (2012) PLoS One , vol.7
    • Chisholm, K.M.1    Aubert, S.D.2    Freese, K.P.3    Zakian, V.A.4    King, M.C.5    Welcsh, P.L.6
  • 22
    • 77953224210 scopus 로고    scopus 로고
    • Defective resection at DNA double-strand breaks leads to de novo telomere formation and enhances gene targeting
    • Chung, W. H., Zhu, Z., Papusha, A., Malkova, A., and Ira, G. 2010. Defective resection at DNA double-strand breaks leads to de novo telomere formation and enhances gene targeting. PLoS Genet. 6, e1000948.
    • (2010) PLoS Genet. , vol.6
    • Chung, W.H.1    Zhu, Z.2    Papusha, A.3    Malkova, A.4    Ira, G.5
  • 23
    • 53349168503 scopus 로고    scopus 로고
    • Defective break-induced replication leads to half-crossovers in Saccharomyces cerevisiae
    • Deem, A., Barker, K., Vanhulle, K., Downing, B., Vayl, A., and Malkova, A. 2008. Defective break-induced replication leads to half-crossovers in Saccharomyces cerevisiae. Genetics179, 1845-1860.
    • (2008) Genetics , vol.179 , pp. 1845-1860
    • Deem, A.1    Barker, K.2    Vanhulle, K.3    Downing, B.4    Vayl, A.5    Malkova, A.6
  • 25
    • 84882372684 scopus 로고    scopus 로고
    • Break-induced replication occurs by conservative DNA synthesis
    • Donnianni, R. A. and Symington, L. S. 2013. Break-induced replication occurs by conservative DNA synthesis. Proc. Natl. Acad. Sci. USA110, 13475-13480.
    • (2013) Proc. Natl. Acad. Sci. USA , vol.110 , pp. 13475-13480
    • Donnianni, R.A.1    Symington, L.S.2
  • 26
    • 39049170386 scopus 로고    scopus 로고
    • Genome-wide analysis reveals regulatory role of G4 DNA in gene transcription
    • Du, Z., Zhao, Y., and Li, N. 2008. Genome-wide analysis reveals regulatory role of G4 DNA in gene transcription. Genome Res. 18, 233-241.
    • (2008) Genome Res. , vol.18 , pp. 233-241
    • Du, Z.1    Zhao, Y.2    Li, N.3
  • 27
    • 3042785608 scopus 로고    scopus 로고
    • Intracellular transcription of G-rich DNAs induces formation of G-loops, novel structures containing G4 DNA
    • Duquette, M. L., Handa, P., Vincent, J. A., Taylor, A. F., and Maizels, N. 2004. Intracellular transcription of G-rich DNAs induces formation of G-loops, novel structures containing G4 DNA. Genes Dev. 18, 1618-1629.
    • (2004) Genes Dev. , vol.18 , pp. 1618-1629
    • Duquette, M.L.1    Handa, P.2    Vincent, J.A.3    Taylor, A.F.4    Maizels, N.5
  • 28
    • 0030861685 scopus 로고    scopus 로고
    • DNA helicases in inherited human disorders
    • Ellis, N. A. 1997. DNA helicases in inherited human disorders. Curr. Opin. Genet. Dev. 7, 354-363.
    • (1997) Curr. Opin. Genet. Dev. , vol.7 , pp. 354-363
    • Ellis, N.A.1
  • 30
    • 9244235535 scopus 로고    scopus 로고
    • Mechanism of ATP-dependent translocation of E. coli UvrD monomers along single-stranded DNA
    • Fischer, C. J., Maluf, N. K., and Lohman, T. M. 2004. Mechanism of ATP-dependent translocation of E. coli UvrD monomers along single-stranded DNA. J. Mol. Biol. 344, 1287-1309.
    • (2004) J. Mol. Biol. , vol.344 , pp. 1287-1309
    • Fischer, C.J.1    Maluf, N.K.2    Lohman, T.M.3
  • 31
    • 0022902536 scopus 로고
    • DNA synthesis dependent on genetic recombination: characterization of a reaction catalyzed by purified bacteriophage T4 proteins
    • Formosa, T. and Alberts, B. M. 1986. DNA synthesis dependent on genetic recombination: characterization of a reaction catalyzed by purified bacteriophage T4 proteins. Cell47, 793-806.
    • (1986) Cell , vol.47 , pp. 793-806
    • Formosa, T.1    Alberts, B.M.2
  • 32
    • 0020823462 scopus 로고
    • - genomes having tandemly arrayed repeat units in Saccharomyces cerevisiae
    • - genomes having tandemly arrayed repeat units in Saccharomyces cerevisiae. Proc. Natl. Acad. Sci. USA80, 5345-5349.
    • (1983) Proc. Natl. Acad. Sci. USA , vol.80 , pp. 5345-5349
    • Foury, F.1    Kolodynski, J.2
  • 33
    • 0342527473 scopus 로고
    • A PIF-dependent recombinogenic signal in the mitochondrial DNA of yeast
    • Foury, F. and van Dyck, E. 1985. A PIF-dependent recombinogenic signal in the mitochondrial DNA of yeast. EMBO J. 4, 3525-3530.
    • (1985) EMBO J. , vol.4 , pp. 3525-3530
    • Foury, F.1    van Dyck, E.2
  • 34
    • 84877307215 scopus 로고    scopus 로고
    • Translocation of Saccharomyces cerevisiae Pif1 helicase monomers on single-stranded DNA
    • Galletto, R. and Tomko, E. J. 2013. Translocation of Saccharomyces cerevisiae Pif1 helicase monomers on single-stranded DNA. Nucleic Acids Res. 41, 4613-4627.
    • (2013) Nucleic Acids Res. , vol.41 , pp. 4613-4627
    • Galletto, R.1    Tomko, E.J.2
  • 35
    • 8644285427 scopus 로고    scopus 로고
    • Idling by DNA polymerase δ maintains a ligatable nick during lagging-strand DNA replication
    • Garg, P., Stith, C. M., Sabouri, N., Johansson, E., and Burgers, P. M. 2004. Idling by DNA polymerase δ maintains a ligatable nick during lagging-strand DNA replication. Genes Dev. 18, 2764-2773.
    • (2004) Genes Dev. , vol.18 , pp. 2764-2773
    • Garg, P.1    Stith, C.M.2    Sabouri, N.3    Johansson, E.4    Burgers, P.M.5
  • 36
    • 71049180940 scopus 로고    scopus 로고
    • Human Pif1 helicase unwinds synthetic DNA structures resembling stalled DNA replication forks
    • George, T., Wen, Q., Griffiths, R., Ganesh, A., Meuth, M., and Sanders, C. M. 2009. Human Pif1 helicase unwinds synthetic DNA structures resembling stalled DNA replication forks. Nucleic Acids Res. 37, 6491-6502.
    • (2009) Nucleic Acids Res. , vol.37 , pp. 6491-6502
    • George, T.1    Wen, Q.2    Griffiths, R.3    Ganesh, A.4    Meuth, M.5    Sanders, C.M.6
  • 37
    • 38349095525 scopus 로고    scopus 로고
    • Genomic distribution and functional analyses of potential G-quadruplex-forming sequences in Saccharomyces cerevisiae
    • Hershman, S. G., Chen, Q., Lee, J. Y., Kozak, M. L., Yue, P., Wang, L. S., and Johnson, F. B. 2008. Genomic distribution and functional analyses of potential G-quadruplex-forming sequences in Saccharomyces cerevisiae. Nucleic Acids Res. 36, 144-156.
    • (2008) Nucleic Acids Res. , vol.36 , pp. 144-156
    • Hershman, S.G.1    Chen, Q.2    Lee, J.Y.3    Kozak, M.L.4    Yue, P.5    Wang, L.S.6    Johnson, F.B.7
  • 38
    • 34948812991 scopus 로고    scopus 로고
    • Mrc1 and Tof1 regulate DNA replication forks in different ways during normal S phase
    • Hodgson, B., Calzada, A., and Labib, K. 2007. Mrc1 and Tof1 regulate DNA replication forks in different ways during normal S phase. Mol. Biol. Cell18, 3894-3902.
    • (2007) Mol. Biol. Cell , vol.18 , pp. 3894-3902
    • Hodgson, B.1    Calzada, A.2    Labib, K.3
  • 39
    • 0037106470 scopus 로고    scopus 로고
    • G4 DNA unwinding by BLM and Sgs1p: substrate specificity and substrate-specific inhibition
    • Huber, M. D., Lee, D. C., and Maizels, N. 2002. G4 DNA unwinding by BLM and Sgs1p: substrate specificity and substrate-specific inhibition. Nucleic Acids Res. 30, 3954-3961.
    • (2002) Nucleic Acids Res. , vol.30 , pp. 3954-3961
    • Huber, M.D.1    Lee, D.C.2    Maizels, N.3
  • 40
    • 77955834769 scopus 로고    scopus 로고
    • Structure, location and interactions of G-quadruplexes
    • Huppert, J. L. 2010. Structure, location and interactions of G-quadruplexes. FEBS J. 277, 3452-3458.
    • (2010) FEBS J. , vol.277 , pp. 3452-3458
    • Huppert, J.L.1
  • 41
    • 0034681257 scopus 로고    scopus 로고
    • The Saccharomyces Pif1p DNA helicase and the highly related Rrm3p have opposite effects on replication fork progression in ribosomal DNA
    • Ivessa, A. S., Zhou, J. Q., and Zakian, V. A. 2000. The Saccharomyces Pif1p DNA helicase and the highly related Rrm3p have opposite effects on replication fork progression in ribosomal DNA. Cell100, 479-489.
    • (2000) Cell , vol.100 , pp. 479-489
    • Ivessa, A.S.1    Zhou, J.Q.2    Zakian, V.A.3
  • 42
    • 0036606186 scopus 로고    scopus 로고
    • Saccharomyces Rrm3p, a 5 to 3 DNA helicase that promotes replication fork progression through telomeric and subtelomeric DNA
    • Ivessa, A. S., Zhou, J. Q., Schulz, V. P., Monson, E. K., and Zakian, V. A. 2002. Saccharomyces Rrm3p, a 5 to 3 DNA helicase that promotes replication fork progression through telomeric and subtelomeric DNA. Genes Dev. 16, 1383-1396.
    • (2002) Genes Dev. , vol.16 , pp. 1383-1396
    • Ivessa, A.S.1    Zhou, J.Q.2    Schulz, V.P.3    Monson, E.K.4    Zakian, V.A.5
  • 43
    • 0348047594 scopus 로고    scopus 로고
    • The Saccharomyces cerevisiae helicase Rrm3p facilitates replication past nonhistone protein-DNA complexes
    • Ivessa, A. S., Lenzmeier, B. A., Bessler, J. B., Goudsouzian, L. K., Schnakenberg, S. L., and Zakian, V. A. 2003. The Saccharomyces cerevisiae helicase Rrm3p facilitates replication past nonhistone protein-DNA complexes. Mol. Cell12, 1525-1536.
    • (2003) Mol. Cell , vol.12 , pp. 1525-1536
    • Ivessa, A.S.1    Lenzmeier, B.A.2    Bessler, J.B.3    Goudsouzian, L.K.4    Schnakenberg, S.L.5    Zakian, V.A.6
  • 44
    • 77949557756 scopus 로고    scopus 로고
    • Dna2 on the road to Okazaki fragment processing and genome stability in eukaryotes
    • Kang, Y. H., Lee, C. H., and Seo, Y. S. 2010. Dna2 on the road to Okazaki fragment processing and genome stability in eukaryotes. Crit. Rev. Biochem. Mol. Biol. 45, 71-96.
    • (2010) Crit. Rev. Biochem. Mol. Biol. , vol.45 , pp. 71-96
    • Kang, Y.H.1    Lee, C.H.2    Seo, Y.S.3
  • 45
    • 2442601582 scopus 로고    scopus 로고
    • On the roles of Saccharomyces cerevisiae Dna2p and Flap endonuclease 1 in Okazaki fragment processing
    • Kao, H. I., Veeraraghavan, J., Polaczek, P., Campbell, J. L., and Bambara, R. A. 2004. On the roles of Saccharomyces cerevisiae Dna2p and Flap endonuclease 1 in Okazaki fragment processing. J. Biol. Chem. 279, 15014-15024.
    • (2004) J. Biol. Chem. , vol.279 , pp. 15014-15024
    • Kao, H.I.1    Veeraraghavan, J.2    Polaczek, P.3    Campbell, J.L.4    Bambara, R.A.5
  • 46
    • 0027515187 scopus 로고
    • A gene with specific and global effects on recombination of sequences from tandemly repeated genes in Saccharomyces cerevisiae
    • Keil, R. L. and McWilliams, A. D. 1993. A gene with specific and global effects on recombination of sequences from tandemly repeated genes in Saccharomyces cerevisiae. Genetics135, 711-718.
    • (1993) Genetics , vol.135 , pp. 711-718
    • Keil, R.L.1    McWilliams, A.D.2
  • 48
    • 0026772415 scopus 로고
    • Binding properties of replication protein A from human and yeast cells
    • Kim, C., Snyder, R. O., and Wold, M. S. 1992. Binding properties of replication protein A from human and yeast cells. Mol. Cell. Biol. 12, 3050-3059.
    • (1992) Mol. Cell. Biol. , vol.12 , pp. 3050-3059
    • Kim, C.1    Snyder, R.O.2    Wold, M.S.3
  • 49
    • 0344629438 scopus 로고    scopus 로고
    • The replication fork barrier site forms a unique structure with Fob1p and inhibits the replication fork
    • Kobayashi, T. 2003. The replication fork barrier site forms a unique structure with Fob1p and inhibits the replication fork. Mol. Cell. Biol. 23, 9178-9188.
    • (2003) Mol. Cell. Biol. , vol.23 , pp. 9178-9188
    • Kobayashi, T.1
  • 50
    • 0032535478 scopus 로고    scopus 로고
    • Expansion and contraction of ribosomal DNA repeats in Saccharomyces cerevisiae: requirement of replication fork blocking (Fob1) protein and the role of RNA polymerase I
    • Kobayashi, T., Heck, D. J., Nomura, M., and Horiuchi, T. 1998. Expansion and contraction of ribosomal DNA repeats in Saccharomyces cerevisiae: requirement of replication fork blocking (Fob1) protein and the role of RNA polymerase I. Genes Dev. 12, 3821-3830.
    • (1998) Genes Dev. , vol.12 , pp. 3821-3830
    • Kobayashi, T.1    Heck, D.J.2    Nomura, M.3    Horiuchi, T.4
  • 51
    • 0026059948 scopus 로고
    • PIF1: a DNA helicase in yeast mitochondria
    • Lahaye, A., Stahl, H., Thines-Sempoux, D., and Foury, F. 1991. PIF1: a DNA helicase in yeast mitochondria. EMBO J. 10, 997-1007.
    • (1991) EMBO J. , vol.10 , pp. 997-1007
    • Lahaye, A.1    Stahl, H.2    Thines-Sempoux, D.3    Foury, F.4
  • 52
    • 0027520190 scopus 로고
    • PIF1 DNA helicase from Saccharomyces cerevisiae. Biochemical characterization of the enzyme
    • Lahaye, A., Leterme, S., and Foury, F. 1993. PIF1 DNA helicase from Saccharomyces cerevisiae. Biochemical characterization of the enzyme. J. Biol. Chem. 268, 26155-26161.
    • (1993) J. Biol. Chem. , vol.268 , pp. 26155-26161
    • Lahaye, A.1    Leterme, S.2    Foury, F.3
  • 53
    • 0024541837 scopus 로고
    • Mito chondrial DNA mutations as an important contributor to aging and degenerative diseases
    • Linnane, A. W., Ozawa, T., Marzuki, S., and Tanaka, M. 1989. Mito chondrial DNA mutations as an important contributor to aging and degenerative diseases. Lancet1, 642-645.
    • (1989) Lancet , vol.1 , pp. 642-645
    • Linnane, A.W.1    Ozawa, T.2    Marzuki, S.3    Tanaka, M.4
  • 54
    • 68549136741 scopus 로고    scopus 로고
    • G-quadruplex structures: in vivo evidence and function
    • Lipps, H. J. and Rhodes, D. 2009. G-quadruplex structures: in vivo evidence and function. Trends Cell Biol. 19, 414-422.
    • (2009) Trends Cell Biol. , vol.19 , pp. 414-422
    • Lipps, H.J.1    Rhodes, D.2
  • 55
    • 42449141601 scopus 로고    scopus 로고
    • Non-hexameric DNA helicases and translocases: mechanisms and regulation
    • Lohman, T. M., Tomko, E. J., and Wu, C. G. 2008. Non-hexameric DNA helicases and translocases: mechanisms and regulation. Nat. Rev. Mol. Cell. Biol. 9, 391-401.
    • (2008) Nat. Rev. Mol. Cell. Biol. , vol.9 , pp. 391-401
    • Lohman, T.M.1    Tomko, E.J.2    Wu, C.G.3
  • 57
    • 0035807967 scopus 로고    scopus 로고
    • Okazaki fragment processing: modulation of the strand displacement activity of DNA polymerase delta by the concerted action of replication protein A, proliferating cell nuclear antigen, and flap endonuclease-1
    • Maga, G., Villani, G., Tillement, V., Stucki, M., Locatelli, G. A., Frouin, I., Spadari, S., and Hubscher, U. 2001. Okazaki fragment processing: modulation of the strand displacement activity of DNA polymerase delta by the concerted action of replication protein A, proliferating cell nuclear antigen, and flap endonuclease-1. Proc. Natl. Acad. Sci. USA98, 14298-14303.
    • (2001) Proc. Natl. Acad. Sci. USA , vol.98 , pp. 14298-14303
    • Maga, G.1    Villani, G.2    Tillement, V.3    Stucki, M.4    Locatelli, G.A.5    Frouin, I.6    Spadari, S.7    Hubscher, U.8
  • 58
    • 70449522305 scopus 로고    scopus 로고
    • DNA damage signaling prevents deleterious telomere addition at DNA breaks
    • Makovets, S. and Blackburn, E. H. 2009. DNA damage signaling prevents deleterious telomere addition at DNA breaks. Nat. Cell. Biol. 11, 1383-1386.
    • (2009) Nat. Cell. Biol. , vol.11 , pp. 1383-1386
    • Makovets, S.1    Blackburn, E.H.2
  • 59
    • 0029947714 scopus 로고    scopus 로고
    • Double-strand break repair in the absence of RAD51 in yeast: a possible role for break-induced DNA replication
    • Malkova, A., Ivanov, E. L., and Haber, J. E. 1996. Double-strand break repair in the absence of RAD51 in yeast: a possible role for break-induced DNA replication. Proc. Natl. Acad. Sci. USA93, 7131-7136.
    • (1996) Proc. Natl. Acad. Sci. USA , vol.93 , pp. 7131-7136
    • Malkova, A.1    Ivanov, E.L.2    Haber, J.E.3
  • 60
    • 0035664986 scopus 로고    scopus 로고
    • Repair of chromosome ends after telomere loss in Saccharomyces
    • Mangahas, J. L., Alexander, M. K., Sandell, L. L., and Zakian, V. A. 2001. Repair of chromosome ends after telomere loss in Saccharomyces. Mol. Biol. Cell12, 4078-4089.
    • (2001) Mol. Biol. Cell , vol.12 , pp. 4078-4089
    • Mangahas, J.L.1    Alexander, M.K.2    Sandell, L.L.3    Zakian, V.A.4
  • 61
    • 33845433365 scopus 로고    scopus 로고
    • Human PIF helicase is cell cycle regulated and associates with telomerase
    • Mateyak, M. K. and Zakian, V. A. 2006. Human PIF helicase is cell cycle regulated and associates with telomerase. Cell Cycle5, 2796-2804.
    • (2006) Cell Cycle , vol.5 , pp. 2796-2804
    • Mateyak, M.K.1    Zakian, V.A.2
  • 62
    • 0030760609 scopus 로고    scopus 로고
    • Break copy duplication: a model for chromosome fragment formation in Saccharomyces cerevisiae
    • Morrow, D. M., Connelly, C., and Hieter, P. 1997. "Break copy" duplication: a model for chromosome fragment formation in Saccharomyces cerevisiae. Genetics147, 371-382.
    • (1997) Genetics , vol.147 , pp. 371-382
    • Morrow, D.M.1    Connelly, C.2    Hieter, P.3
  • 63
    • 0035963338 scopus 로고    scopus 로고
    • Multiple pathways cooperate in the suppression of genome instability in Saccharomyces cerevisiae
    • Myung, K., Chen, C., and Kolodner, R. D. 2001. Multiple pathways cooperate in the suppression of genome instability in Saccharomyces cerevisiae. Nature411, 1073-1076.
    • (2001) Nature , vol.411 , pp. 1073-1076
    • Myung, K.1    Chen, C.2    Kolodner, R.D.3
  • 64
    • 0026701992 scopus 로고
    • Assembly of simian virus 40 Okazaki pieces from DNA primers is reversibly arrested by ATP depletion
    • Nethanel, T., Zlotkin, T., and Kaufmann, G. 1992. Assembly of simian virus 40 Okazaki pieces from DNA primers is reversibly arrested by ATP depletion. J. Virol. 66, 6634-6640.
    • (1992) J. Virol. , vol.66 , pp. 6634-6640
    • Nethanel, T.1    Zlotkin, T.2    Kaufmann, G.3
  • 65
    • 19644371048 scopus 로고    scopus 로고
    • Differential involvement of the related DNA helicases Pif1p and Rrm3p in mtDNA point mutagenesis and stability
    • O'Rourke, T. W., Doudican, N. A., Zang, H., Eaton, J. S., Doetsch, P. W., and Shadel, G. S. 2005. Differential involvement of the related DNA helicases Pif1p and Rrm3p in mtDNA point mutagenesis and stability. Gene354, 86-92.
    • (2005) Gene , vol.354 , pp. 86-92
    • O'Rourke, T.W.1    Doudican, N.A.2    Zang, H.3    Eaton, J.S.4    Doetsch, P.W.5    Shadel, G.S.6
  • 67
    • 79957556530 scopus 로고    scopus 로고
    • DNA replication through G-quadruplex motifs is promoted by the Saccharomyces cerevisiae Pif1 DNA helicase
    • Paeschke, K., Capra, J. A., and Zakian, V. A. 2011. DNA replication through G-quadruplex motifs is promoted by the Saccharomyces cerevisiae Pif1 DNA helicase. Cell145, 678-691.
    • (2011) Cell , vol.145 , pp. 678-691
    • Paeschke, K.1    Capra, J.A.2    Zakian, V.A.3
  • 68
    • 27144451010 scopus 로고    scopus 로고
    • Telomere end-binding proteins control the formation of G-quadruplex DNA structures in vivo
    • Paeschke, K., Simonsson, T., Postberg, J., Rhodes, D., and Lipps, H. J. 2005. Telomere end-binding proteins control the formation of G-quadruplex DNA structures in vivo. Nat. Struct. Mol. Biol. 12, 847-854.
    • (2005) Nat. Struct. Mol. Biol. , vol.12 , pp. 847-854
    • Paeschke, K.1    Simonsson, T.2    Postberg, J.3    Rhodes, D.4    Lipps, H.J.5
  • 69
    • 33745823112 scopus 로고    scopus 로고
    • Mechanisms of helicases
    • Patel, S. S. and Donmez, I. 2006. Mechanisms of helicases. J. Biol. Chem. 281, 18265-18268.
    • (2006) J. Biol. Chem. , vol.281 , pp. 18265-18268
    • Patel, S.S.1    Donmez, I.2
  • 70
    • 55449083694 scopus 로고    scopus 로고
    • The Schizosaccharomyces pombe Pfh1p DNA helicase is essential for the maintenance of nuclear and mitochondrial DNA
    • Pinter, S. F., Aubert, S. D., and Zakian, V. A. 2008. The Schizosaccharomyces pombe Pfh1p DNA helicase is essential for the maintenance of nuclear and mitochondrial DNA. Mol. Cell. Biol. 28, 6594-6608.
    • (2008) Mol. Cell. Biol. , vol.28 , pp. 6594-6608
    • Pinter, S.F.1    Aubert, S.D.2    Zakian, V.A.3
  • 73
    • 33644633822 scopus 로고    scopus 로고
    • Lagging strand replication proteins in genome stability and DNA repair
    • Rossi, M. L., Purohit, V., Brandt, P. D., and Bambara, R. A. 2006. Lagging strand replication proteins in genome stability and DNA repair. Chem. Rev. 106, 453-473.
    • (2006) Chem. Rev. , vol.106 , pp. 453-473
    • Rossi, M.L.1    Purohit, V.2    Brandt, P.D.3    Bambara, R.A.4
  • 75
    • 84858315982 scopus 로고    scopus 로고
    • DNA replication through hard-to-replicate sites, including both highly transcribed RNA Pol II and Pol III genes, requires the S. pombe Pfh1 helicase
    • Sabouri, N., McDonald, K. R., Webb, C. J., Cristea, I. M., and Zakian, V. A. 2012. DNA replication through hard-to-replicate sites, including both highly transcribed RNA Pol II and Pol III genes, requires the S. pombe Pfh1 helicase. Genes Dev. 26, 581-593.
    • (2012) Genes Dev. , vol.26 , pp. 581-593
    • Sabouri, N.1    McDonald, K.R.2    Webb, C.J.3    Cristea, I.M.4    Zakian, V.A.5
  • 77
    • 77955487510 scopus 로고    scopus 로고
    • Human Pif1 helicase is a G-quadruplex DNA-binding protein with G-quadruplex DNA-unwinding activity
    • Sanders, C. M. 2010. Human Pif1 helicase is a G-quadruplex DNA-binding protein with G-quadruplex DNA-unwinding activity. Biochem J. 430, 119-128.
    • (2010) Biochem J. , vol.430 , pp. 119-128
    • Sanders, C.M.1
  • 78
    • 0028178792 scopus 로고
    • The Saccharomyces PIF1 DNA helicase inhibits telomere elongation and de novo telomere formation
    • Schulz, V. P. and Zakian, V. A. 1994. The Saccharomyces PIF1 DNA helicase inhibits telomere elongation and de novo telomere formation. Cell76, 145-155.
    • (1994) Cell , vol.76 , pp. 145-155
    • Schulz, V.P.1    Zakian, V.A.2
  • 79
    • 0032942212 scopus 로고    scopus 로고
    • Systematic identification, classification, and characterization of the open reading frames which encode novel helicase-related proteins in Saccharomyces cerevisiae by gene disruption and Northern analysis
    • Shiratori, A., Shibata, T., Arisawa, M., Hanaoka, F., Murakami, Y., and Eki, T. 1999. Systematic identification, classification, and characterization of the open reading frames which encode novel helicase-related proteins in Saccharomyces cerevisiae by gene disruption and Northern analysis. Yeast15, 219-253.
    • (1999) Yeast , vol.15 , pp. 219-253
    • Shiratori, A.1    Shibata, T.2    Arisawa, M.3    Hanaoka, F.4    Murakami, Y.5    Eki, T.6
  • 80
    • 34548638261 scopus 로고    scopus 로고
    • Structure and mechanism of helicases and nucleic acid translocases
    • Singleton, M. R., Dillingham, M. S., and Wigley, D. B. 2007. Structure and mechanism of helicases and nucleic acid translocases. Annu. Rev. Biochem. 76, 23-50.
    • (2007) Annu. Rev. Biochem. , vol.76 , pp. 23-50
    • Singleton, M.R.1    Dillingham, M.S.2    Wigley, D.B.3
  • 82
    • 57749100294 scopus 로고    scopus 로고
    • Flexibility of eukaryotic Okazaki fragment maturation through regulated strand displacement synthesis
    • Stith, C. M., Sterling, J., Resnick, M. A., Gordenin, D. A., and Burgers, P. M. 2008. Flexibility of eukaryotic Okazaki fragment maturation through regulated strand displacement synthesis. J. Biol. Chem. 283, 34129-34140.
    • (2008) J. Biol. Chem. , vol.283 , pp. 34129-34140
    • Stith, C.M.1    Sterling, J.2    Resnick, M.A.3    Gordenin, D.A.4    Burgers, P.M.5
  • 83
    • 0024843757 scopus 로고
    • Telomeric DNA dimerizes by formation of guanine tetrads between hairpin loops
    • Sundquist, W. I. and Klug, A. 1989. Telomeric DNA dimerizes by formation of guanine tetrads between hairpin loops. Nature342, 825-829.
    • (1989) Nature , vol.342 , pp. 825-829
    • Sundquist, W.I.1    Klug, A.2
  • 84
    • 0036850709 scopus 로고    scopus 로고
    • The fission yeast pfh1(+) gene encodes an essential 5 to 3 DNA helicase required for the completion of S-phase
    • Tanaka, H., Ryu, G. H., Seo, Y. S., Tanaka, K., Okayama, H., MacNeill, S. A., and Yuasa, Y. 2002. The fission yeast pfh1(+) gene encodes an essential 5 to 3 DNA helicase required for the completion of S-phase. Nucleic Acids Res. 30, 4728-4739.
    • (2002) Nucleic Acids Res. , vol.30 , pp. 4728-4739
    • Tanaka, H.1    Ryu, G.H.2    Seo, Y.S.3    Tanaka, K.4    Okayama, H.5    MacNeill, S.A.6    Yuasa, Y.7
  • 85
    • 1642417690 scopus 로고    scopus 로고
    • Local chromatin structure at the ribosomal DNA causes replication fork pausing and genome instability in the absence of the S. cerevisiae DNA helicase Rrm3p
    • Torres, J. Z., Bessler, J. B., and Zakian, V. A. 2004. Local chromatin structure at the ribosomal DNA causes replication fork pausing and genome instability in the absence of the S. cerevisiae DNA helicase Rrm3p. Genes Dev. 18, 498-503.
    • (2004) Genes Dev. , vol.18 , pp. 498-503
    • Torres, J.Z.1    Bessler, J.B.2    Zakian, V.A.3
  • 86
    • 2442676334 scopus 로고    scopus 로고
    • Prokaryotic and eukaryotic DNA helicases. Essential molecular motor proteins for cellular machinery
    • Tuteja, N. and Tuteja, R. 2004. Prokaryotic and eukaryotic DNA helicases. Essential molecular motor proteins for cellular machinery. Eur. J. Biochem. 271, 1835-1848.
    • (2004) Eur. J. Biochem. , vol.271 , pp. 1835-1848
    • Tuteja, N.1    Tuteja, R.2
  • 87
    • 79951703153 scopus 로고    scopus 로고
    • Genome-wide comprehensive analysis of human helicases
    • Umate, P., Tuteja, N., and Tuteja, R. 2011. Genome-wide comprehensive analysis of human helicases. Commun. Integr. Biol. 4, 118-137.
    • (2011) Commun. Integr. Biol. , vol.4 , pp. 118-137
    • Umate, P.1    Tuteja, N.2    Tuteja, R.3
  • 88
    • 0026784158 scopus 로고
    • A single-stranded DNA binding protein required for mitochondrial DNA replication in S. cerevisiae is homologous to E. coli SSB
    • van Dyck, E., Foury, F., Stillman, B., and Brill, S. J. 1992. A single-stranded DNA binding protein required for mitochondrial DNA replication in S. cerevisiae is homologous to E. coli SSB. EMBO J. 11, 3421-3430.
    • (1992) EMBO J. , vol.11 , pp. 3421-3430
    • van Dyck, E.1    Foury, F.2    Stillman, B.3    Brill, S.J.4
  • 90
    • 59649105477 scopus 로고    scopus 로고
    • Replisome stalling and stabilization at CGG repeats, which are responsible for chromosomal fragility
    • Voineagu, I., Surka, C. F., Shishkin, A. A., Krasilnikova, M. M., and Mirkin, S. M. 2009. Replisome stalling and stabilization at CGG repeats, which are responsible for chromosomal fragility. Nat. Struct. Mol. Biol. 16, 226-228.
    • (2009) Nat. Struct. Mol. Biol. , vol.16 , pp. 226-228
    • Voineagu, I.1    Surka, C.F.2    Shishkin, A.A.3    Krasilnikova, M.M.4    Mirkin, S.M.5
  • 91
    • 33750467618 scopus 로고    scopus 로고
    • The absence of Top3 reveals an interaction between the Sgs1 and Pif1 DNA helicases in Saccharomyces cerevisiae
    • Wagner, M., Price, G., and Rothstein, R. 2006. The absence of Top3 reveals an interaction between the Sgs1 and Pif1 DNA helicases in Saccharomyces cerevisiae. Genetics174, 555-573.
    • (2006) Genetics , vol.174 , pp. 555-573
    • Wagner, M.1    Price, G.2    Rothstein, R.3
  • 92
    • 0033229970 scopus 로고    scopus 로고
    • The economics of ribosome biosynthesis in yeast
    • Warner, J. R. 1999. The economics of ribosome biosynthesis in yeast. Trends Biochem. Sci. 24, 437-440.
    • (1999) Trends Biochem. Sci. , vol.24 , pp. 437-440
    • Warner, J.R.1
  • 93
    • 84885866032 scopus 로고    scopus 로고
    • Pif1 helicase and Polδ promote recombination-coupled DNA synthesis via bubble migration
    • Wilson, M., Kwon, Y., Xu, Y., Chung, W. H., Chi, P., Niu, H., Mayle, R., Chen, X., Malkova, A., Sung, P., andet al. 2013. Pif1 helicase and Polδ promote recombination-coupled DNA synthesis via bubble migration. Nature502, 393-396.
    • (2013) Nature , vol.502 , pp. 393-396
    • Wilson, M.1    Kwon, Y.2    Xu, Y.3    Chung, W.H.4    Chi, P.5    Niu, H.6    Mayle, R.7    Chen, X.8    Malkova, A.9    Sung, P.10
  • 94
    • 0030908093 scopus 로고    scopus 로고
    • Replication protein A: A heterotrimeric, single-stranded DNA-binding protein required for eukaryotic DNA metabolism
    • Wold, M. S. 1997. Replication protein A: A heterotrimeric, single-stranded DNA-binding protein required for eukaryotic DNA metabolism. Annu. Rev. Biochem. 66, 61-92.
    • (1997) Annu. Rev. Biochem. , vol.66 , pp. 61-92
    • Wold, M.S.1
  • 95
    • 84877310387 scopus 로고    scopus 로고
    • Unwinding and rewinding: Double faces of helicase?
    • Wu, Y. 2012. Unwinding and rewinding: Double faces of helicase? J. Nucleic Acids2012, 140601.
    • (2012) J. Nucleic Acids , vol.2012 , pp. 140601
    • Wu, Y.1
  • 96
    • 33645009269 scopus 로고    scopus 로고
    • The human Pif1 helicase, a potential Escherichia coli RecD homologue, inhibits telomerase activity
    • Zhang, D. H., Zhou, B., Huang, Y., Xu, L. X., and Zhou, J. Q. 2006. The human Pif1 helicase, a potential Escherichia coli RecD homologue, inhibits telomerase activity. Nucleic Acids Res. 34, 1393-1404.
    • (2006) Nucleic Acids Res. , vol.34 , pp. 1393-1404
    • Zhang, D.H.1    Zhou, B.2    Huang, Y.3    Xu, L.X.4    Zhou, J.Q.5
  • 97
    • 0034604503 scopus 로고    scopus 로고
    • Pif1p helicase, a catalytic inhibitor of telomerase in yeast
    • Zhou, J., Monson, E. K., Teng, S. C., Schulz, V. P., and Zakian, V. A. 2000. Pif1p helicase, a catalytic inhibitor of telomerase in yeast. Science289, 771-774.
    • (2000) Science , vol.289 , pp. 771-774
    • Zhou, J.1    Monson, E.K.2    Teng, S.C.3    Schulz, V.P.4    Zakian, V.A.5
  • 98
    • 0035985219 scopus 로고    scopus 로고
    • Schizosaccharomyces pombe pfh1+ encodes an essential 5 to 3 DNA helicase that is a member of the PIF1 subfamily of DNA helicases
    • Zhou, J. Q., Qi, H., Schulz, V. P., Mateyak, M. K., Monson, E. K., and Zakian, V. A. 2002. Schizosaccharomyces pombe pfh1+ encodes an essential 5 to 3 DNA helicase that is a member of the PIF1 subfamily of DNA helicases. Mol. Biol. Cell13, 2180-2191.
    • (2002) Mol. Biol. Cell , vol.13 , pp. 2180-2191
    • Zhou, J.Q.1    Qi, H.2    Schulz, V.P.3    Mateyak, M.K.4    Monson, E.K.5    Zakian, V.A.6
  • 99
    • 51549095956 scopus 로고    scopus 로고
    • Sgs1 helicase and two nucleases Dna2 and Exo1 resect DNA double-strand break ends
    • Zhu, Z., Chung, W. H., Shim, E. Y., Lee, S. E., and Ira, G. 2008. Sgs1 helicase and two nucleases Dna2 and Exo1 resect DNA double-strand break ends. Cell 134, 981-994.
    • (2008) Cell , vol.134 , pp. 981-994
    • Zhu, Z.1    Chung, W.H.2    Shim, E.Y.3    Lee, S.E.4    Ira, G.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.