Non-synonymous variations in cancer and their effects on the human proteome: Workflow for NGS data biocuration and proteome-wide analysis of TCGA data

BMC Bioinformatics

Volumn 15, Issue 1, 2014, Pages

  Cole, Charles ^a   Krampis, Konstantinos ^b   Karagiannis, Konstantinos ^a   Almeida, Jonas S ^c   Faison, William J ^a   Motwani, Mona ^a   Wan, Quan ^a   Golikov, Anton ^d   Pan, Yang ^a   Simonyan, Vahan ^d   Mazumder, Raja ^a,e  

^a GEORGE WASHINGTON UNIVERSITY MEDICAL CENTER   (United States)

^b J CRAIG VENTER INSTITUTE   (United States)

^c University of Alabama at Birmingham   (United States)

^d CENTER FOR BIOLOGICS EVALUATION AND RESEARCH   (United States)

^e GEORGE WASHINGTON UNIVERSITY SCHOOL OF MEDICINE AND HEALTH SCIENCES   (United States)

Author keywords

Cancer; Next gen; NGS; nsSNV; Phylogenetics; SNP; SNV; SRA; TCGA

Indexed keywords

CANCER; NEXT-GEN; NGS; NSSNV; PHYLOGENETICS; SNP; SNV; SRA; TCGA;

DATABASE SYSTEMS; GENES; MEDICAL COMPUTING; TOOLS; VIRTUAL REALITY;

DISEASES;

PROTEOME;

ALGORITHM; ARTICLE; CLASSIFICATION; COMPUTER INTERFACE; DATA BASE; GENETIC DATABASE; GENETICS; HIGH THROUGHPUT SEQUENCING; HUMAN; MEDICAL RESEARCH; METABOLISM; METHODOLOGY; NEOPLASM; PHYLOGENY; PROTEOMICS; SINGLE NUCLEOTIDE POLYMORPHISM;

ALGORITHMS; BIOMEDICAL RESEARCH; DATABASE MANAGEMENT SYSTEMS; DATABASES, GENETIC; HIGH-THROUGHPUT NUCLEOTIDE SEQUENCING; HUMANS; NEOPLASMS; PHYLOGENY; POLYMORPHISM, SINGLE NUCLEOTIDE; PROTEOME; PROTEOMICS; USER-COMPUTER INTERFACE;

EID: 84892858447     PISSN: None     EISSN: 14712105     Source Type: Journal    
DOI: 10.1186/1471-2105-15-28     Document Type: Article

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