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Volumn 13, Issue 1, 2013, Pages 14-21

Browsing (Epi)genomes: A guide to data resources and epigenome browsers for stem cell researchers

Author keywords

[No Author keywords available]

Indexed keywords

DNA;

EID: 84892434206     PISSN: 19345909     EISSN: 18759777     Source Type: Journal    
DOI: 10.1016/j.stem.2013.06.006     Document Type: Review
Times cited : (17)

References (41)
  • 1
    • 77956320061 scopus 로고    scopus 로고
    • Targeting of de novo DNA methylation throughout the Oct-4 gene regulatory region in differentiating embryonic stem cells
    • Athanasiadou, R., de Sousa, D., Myant, K., Merusi, C., Stancheva, I., and Bird, A. (2010). Targeting of de novo DNA methylation throughout the Oct-4 gene regulatory region in differentiating embryonic stem cells. PLoS ONE 5, e9937.
    • (2010) PLoS ONE , vol.5
    • Athanasiadou, R.1    De Sousa, D.2    Myant, K.3    Merusi, C.4    Stancheva, I.5    Bird, A.6
  • 9
    • 84862263248 scopus 로고    scopus 로고
    • The NIH Roadmap Epigenomics Program data resource
    • Chadwick, L.H. (2012). The NIH Roadmap Epigenomics Program data resource. Epigenomics 4, 317-324.
    • (2012) Epigenomics , vol.4 , pp. 317-324
    • Chadwick, L.H.1
  • 10
    • 44649117905 scopus 로고    scopus 로고
    • Integration of external signaling pathways with the core transcriptional network in embryonic stem cells
    • Chen, X., Xu, H., Yuan, P., Fang, F., Huss, M., Vega, V.B., Wong, E., Orlov, Y.L., Zhang, W., Jiang, J., et al. (2008). Integration of external signaling pathways with the core transcriptional network in embryonic stem cells. Cell 133, 1106-1117.
    • (2008) Cell , vol.133 , pp. 1106-1117
    • Chen, X.1    Xu, H.2    Yuan, P.3    Fang, F.4    Huss, M.5    Vega, V.B.6    Wong, E.7    Orlov, Y.L.8    Zhang, W.9    Jiang, J.10
  • 13
    • 79955550445 scopus 로고    scopus 로고
    • A user's guide to the encyclopedia of DNA elements (ENCODE)
    • ENCODE Project Consortium
    • ENCODE Project Consortium. (2011). A user's guide to the encyclopedia of DNA elements (ENCODE). PLoS Biol. 9, e1001046.
    • (2011) PLoS Biol. , vol.9
  • 18
    • 77955801615 scopus 로고    scopus 로고
    • Galaxy: A comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences
    • Galaxy Team
    • Goecks, J., Nekrutenko, A., and Taylor, J.; Galaxy Team. (2010). Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences. Genome Biol. 11, R86.
    • (2010) Genome Biol. , vol.11
    • Goecks, J.1    Nekrutenko, A.2    Taylor, J.3
  • 20
    • 58549112996 scopus 로고    scopus 로고
    • Bioinformatics enrichment tools: Paths toward the comprehensive functional analysis of large gene lists
    • Huang, W., Sherman, B.T., and Lempicki, R.A. (2009). Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists. Nucleic Acids Res. 37, 1-13.
    • (2009) Nucleic Acids Res. , vol.37 , pp. 1-13
    • Huang, W.1    Sherman, B.T.2    Lempicki, R.A.3
  • 27
    • 77957970498 scopus 로고    scopus 로고
    • Epigenetic modifications in pluripotent and differentiated cells
    • Meissner, A. (2010). Epigenetic modifications in pluripotent and differentiated cells. Nat. Biotechnol. 28, 1079-1088.
    • (2010) Nat. Biotechnol. , vol.28 , pp. 1079-1088
    • Meissner, A.1
  • 36
    • 84874194072 scopus 로고    scopus 로고
    • DNA methylation: Roles in mammalian development
    • Smith, Z.D., and Meissner, A. (2013). DNA methylation: roles in mammalian development. Nat. Rev. Genet. 14, 204-220.
    • (2013) Nat. Rev. Genet. , vol.14 , pp. 204-220
    • Smith, Z.D.1    Meissner, A.2
  • 37
    • 77951962908 scopus 로고    scopus 로고
    • Touring Ensembl: A practical guide to genome browsing
    • Spudich, G.M., and Fernández-Suárez, X.M. (2010). Touring Ensembl: a practical guide to genome browsing. BMC Genomics 11, 295.
    • (2010) BMC Genomics , vol.11 , pp. 295
    • Spudich, G.M.1    Fernández-Suárez, X.M.2
  • 38
    • 7444260846 scopus 로고    scopus 로고
    • The ENCODE (ENCyclopedia of DNA Elements)
    • The ENCODE Project Consortium
    • The ENCODE Project Consortium. (2004). The ENCODE (ENCyclopedia Of DNA Elements). Project. Science 306, 636-640.
    • (2004) Project. Science , vol.306 , pp. 636-640


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.