-
1
-
-
18344394166
-
Post-prenylation-processing enzymes as new targets in oncogenesis
-
Winter-Vann, A. M. & Casey, P. J. Post-prenylation-processing enzymes as new targets in oncogenesis. Nature Rev. Cancer 5, 405-412 (2005)
-
(2005)
Nature Rev. Cancer
, vol.5
, pp. 405-412
-
-
Winter-Vann, A.M.1
Casey, P.J.2
-
2
-
-
84858796808
-
Ras trafficking, localization and compartmentalized signalling
-
Prior, I. A. & Hancock, J. F. Ras trafficking, localization and compartmentalized signalling. Semin. Cell Dev. Biol. 23, 145-153 (2012)
-
(2012)
Semin. Cell Dev. Biol.
, vol.23
, pp. 145-153
-
-
Prior, I.A.1
Hancock, J.F.2
-
3
-
-
84255195028
-
Regulating the regulator: Post-translational modification of RAS
-
Ahearn, I. M., Haigis, K., Bar-Sagi, D. & Philips, M. R. Regulating the regulator: post-translational modification of RAS. Nature Rev. Mol. Cell Biol. 13, 39-51 (2012)
-
(2012)
Nature Rev. Mol. Cell Biol.
, vol.13
, pp. 39-51
-
-
Ahearn, I.M.1
Haigis, K.2
Bar-Sagi, D.3
Philips, M.R.4
-
4
-
-
0030909336
-
Modulation of Ras and a-factor function by carboxyl-terminal proteolysis
-
Boyartchuk, V. L., Ashby, M. N. &Rine, J. Modulation of Ras and a-factor function by carboxyl-terminal proteolysis. Science 275, 1796-1800 (1997)
-
(1997)
Science
, vol.275
, pp. 1796-1800
-
-
Boyartchuk, V.L.1
Ashby, M.N.2
Rine, J.3
-
5
-
-
0032530150
-
Endoplasmic reticulum membrane localization of Rce1p and Ste24p, yeast proteases involved in carboxyl-terminal CAAX protein processing and amino-terminal a-factor cleavage
-
Schmidt, W. K., Tam, A., Fujimura-Kamada, K. & Michaelis, S. Endoplasmic reticulum membrane localization of Rce1p and Ste24p, yeast proteases involved in carboxyl-terminal CAAX protein processing and amino-terminal a-factor cleavage. Proc. Natl Acad. Sci. USA 95, 11175-11180 (1998)
-
(1998)
Proc. Natl Acad. Sci. USA
, vol.95
, pp. 11175-11180
-
-
Schmidt, W.K.1
Tam, A.2
Fujimura-Kamada, K.3
Michaelis, S.4
-
6
-
-
84865752291
-
Biogenesis of the Saccharomyces cerevisiae pheromone a-factor, fromyeastmating to humandisease
-
Michaelis, S. & Barrowman, J. Biogenesis of the Saccharomyces cerevisiae pheromone a-factor, fromyeastmating to humandisease. Microbiol. Mol. Biol. Rev. 76, 626-651 (2012)
-
(2012)
Microbiol. Mol. Biol. Rev.
, vol.76
, pp. 626-651
-
-
Michaelis, S.1
Barrowman, J.2
-
7
-
-
33750886311
-
Crystal structure of a rhomboid family intramembrane protease
-
Wang, Y., Zhang, Y. & Ha, Y. Crystal structure of a rhomboid family intramembrane protease. Nature 444, 179-180 (2006)
-
(2006)
Nature
, vol.444
, pp. 179-180
-
-
Wang, Y.1
Zhang, Y.2
Ha, Y.3
-
8
-
-
36849037428
-
Structure of a site-2 protease family intramembrane metalloprotease
-
Feng, L. et al. Structure of a site-2 protease family intramembrane metalloprotease. Science 318, 1608-1612 (2007)
-
(2007)
Science
, vol.318
, pp. 1608-1612
-
-
Feng, L.1
-
9
-
-
84871725890
-
Structure of a presenilin family intramembrane aspartate protease
-
Li, X. et al. Structure of a presenilin family intramembrane aspartate protease. Nature 493, 56-61 (2013)
-
(2013)
Nature
, vol.493
, pp. 56-61
-
-
Li, X.1
-
10
-
-
84875515722
-
Structure of the integral membrane protein CAAX protease Ste24p
-
Pryor, E. E. Jr et al. Structure of the integral membrane protein CAAX protease Ste24p. Science 339, 1600-1604 (2013)
-
(2013)
Science
, vol.339
, pp. 1600-1604
-
-
Pryor Jr., E.E.1
-
11
-
-
84875511387
-
The structural basis of ZMPSTE24-dependent laminopathies
-
Quigley, A. et al. The structural basis of ZMPSTE24-dependent laminopathies. Science 339, 1604-1607 (2013)
-
(2013)
Science
, vol.339
, pp. 1604-1607
-
-
Quigley, A.1
-
12
-
-
79960918054
-
The crystal structure of GXGD membrane protease FlaK
-
Hu, J., Xue, Y., Lee, S. & Ha, Y. The crystal structure of GXGD membrane protease FlaK. Nature 475, 528-531 (2011)
-
(2011)
Nature
, vol.475
, pp. 528-531
-
-
Hu, J.1
Xue, Y.2
Lee, S.3
Ha, Y.4
-
13
-
-
0035339494
-
Type II CAAX prenyl endopeptidases belong to a novel superfamily of putative membrane-bound metalloproteases
-
Pei, J. & Grishin, N. V. Type II CAAX prenyl endopeptidases belong to a novel superfamily of putative membrane-bound metalloproteases. Trends Biochem. Sci. 26, 275-277 (2001)
-
(2001)
Trends Biochem. Sci.
, vol.26
, pp. 275-277
-
-
Pei, J.1
Grishin, N.V.2
-
14
-
-
77950652492
-
The Abi proteins and their involvement in bacteriocin self-immunity
-
Kjos, M., Snipen, L., Salehian, Z., Nes, I. F. & Diep, D. B. The Abi proteins and their involvement in bacteriocin self-immunity. J. Bacteriol. 192, 2068-2076 (2010)
-
(2010)
J. Bacteriol.
, vol.192
, pp. 2068-2076
-
-
Kjos, M.1
Snipen, L.2
Salehian, Z.3
Nes, I.F.4
Diep, D.B.5
-
15
-
-
0034636066
-
Studies with recombinant Saccharomyces cerevisiae CaaX prenyl protease Rce1p
-
Dolence, J. M., Steward, L. E., Dolence, E. K.,Wong, D. H. &Poulter, C. D. Studies with recombinant Saccharomyces cerevisiae CaaX prenyl protease Rce1p. Biochemistry 39, 4096-4104 (2000)
-
(2000)
Biochemistry
, vol.39
, pp. 4096-4104
-
-
Dolence, J.M.1
Steward, L.E.2
Dolence, E.K.3
Wong, D.H.4
Poulter, C.D.5
-
16
-
-
33646192360
-
Mutational analysis of the Ras converting enzyme reveals a requirement for glutamate and histidine residues
-
Plummer, L. J. et al. Mutational analysis of the Ras converting enzyme reveals a requirement for glutamate and histidine residues. J. Biol. Chem. 281, 4596-4605 (2006)
-
(2006)
J. Biol. Chem.
, vol.281
, pp. 4596-4605
-
-
Plummer, L.J.1
-
17
-
-
0036132907
-
Absence of the CAAX endoprotease Rce1: Effects on cell growth and transformation
-
Bergo, M. O. et al. Absence of the CAAX endoprotease Rce1: effects on cell growth and transformation. Mol. Cell. Biol. 22, 171-181 (2002)
-
(2002)
Mol. Cell. Biol.
, vol.22
, pp. 171-181
-
-
Bergo, M.O.1
-
18
-
-
33846191877
-
Rce1 deficiency accelerates the development of K-RASinduced myeloproliferative disease
-
Wahlstrom, A. M. et al. Rce1 deficiency accelerates the development of K-RASinduced myeloproliferative disease. Blood 109, 763-768 (2007)
-
(2007)
Blood
, vol.109
, pp. 763-768
-
-
Wahlstrom, A.M.1
-
19
-
-
1042266632
-
On the physiological importance of endoproteolysis of CAAX proteins: Heart-specific RCE1 knockout mice develop a lethal cardiomyopathy
-
Bergo, M. O. et al. On the physiological importance of endoproteolysis of CAAX proteins: heart-specific RCE1 knockout mice develop a lethal cardiomyopathy. J. Biol. Chem. 279, 4729-4736 (2004)
-
(2004)
J. Biol. Chem.
, vol.279
, pp. 4729-4736
-
-
Bergo, M.O.1
-
20
-
-
79957771203
-
RAS-converting enzyme 1-mediated endoproteolysis is required for trafficking of rod phosphodiesterase 6 to photoreceptor outer segments
-
Christiansen, J. R., Kolandaivelu, S.,Bergo, M. O. &Ramamurthy, V. RAS-converting enzyme 1-mediated endoproteolysis is required for trafficking of rod phosphodiesterase 6 to photoreceptor outer segments. Proc. Natl Acad. Sci. USA 108, 8862-8866 (2011)
-
(2011)
Proc. Natl Acad. Sci. USA
, vol.108
, pp. 8862-8866
-
-
Christiansen, J.R.1
Kolandaivelu, S.2
Bergo, M.O.3
Ramamurthy, V.4
-
21
-
-
0033605743
-
Cloning and characterization of a mammalian prenyl protein-specific protease
-
Otto, J. C., Kim, E., Young, S. G. & Casey, P. J. Cloning and characterization of a mammalian prenyl protein-specific protease. J. Biol. Chem. 274, 8379-8382 (1999)
-
(1999)
J. Biol. Chem.
, vol.274
, pp. 8379-8382
-
-
Otto, J.C.1
Kim, E.2
Young, S.G.3
Casey, P.J.4
-
22
-
-
0034327206
-
Human Ras-converting enzyme (hRCE1) endoproteolytic activity on K-Ras-derived peptides
-
Hollander, I., Frommer, E. & Mallon, R. Human Ras-converting enzyme (hRCE1) endoproteolytic activity on K-Ras-derived peptides. Anal. Biochem. 286, 129-137 (2000)
-
(2000)
Anal. Biochem.
, vol.286
, pp. 129-137
-
-
Hollander, I.1
Frommer, E.2
Mallon, R.3
-
23
-
-
1242273732
-
Human Ras converting enzyme endoproteolytic specificity at the P29 and P39 positions of K-Ras-derived peptides
-
Hollander, I. J., Frommer, E., Aulabaugh, A. & Mallon, R. Human Ras converting enzyme endoproteolytic specificity at the P29 and P39 positions of K-Ras-derived peptides. Biochim. Biophys. Acta 1649, 24-29 (2003)
-
(2003)
Biochim. Biophys. Acta
, vol.1649
, pp. 24-29
-
-
Hollander, I.J.1
Frommer, E.2
Aulabaugh, A.3
Mallon, R.4
-
24
-
-
33845365770
-
Structural analysis of a rhomboid family intramembrane protease reveals a gating mechanism for substrate entry
-
Wu, Z. et al. Structural analysis of a rhomboid family intramembrane protease reveals a gating mechanism for substrate entry. Nature Struct. Mol. Biol. 13, 1084-1091 (2006)
-
(2006)
Nature Struct. Mol. Biol.
, vol.13
, pp. 1084-1091
-
-
Wu, Z.1
-
25
-
-
34347250499
-
Enzymatic analysis of a rhomboid intramembrane protease implicates transmembrane helix 5 as the lateral substrate gate
-
Baker, R. P., Young, K., Feng, L., Shi, Y. &Urban, S. Enzymatic analysis of a rhomboid intramembrane protease implicates transmembrane helix 5 as the lateral substrate gate. Proc. Natl Acad. Sci. USA 104, 8257-8262 (2007)
-
(2007)
Proc. Natl Acad. Sci. USA
, vol.104
, pp. 8257-8262
-
-
Baker, R.P.1
Young, K.2
Feng, L.3
Shi, Y.4
Urban, S.5
-
26
-
-
33846275257
-
Structural basis for intramembrane proteolysis by rhomboid serine proteases
-
Ben-Shem, A., Fass, D. & Bibi, E. Structural basis for intramembrane proteolysis by rhomboid serine proteases. Proc. Natl Acad. Sci. USA 104, 462-466 (2007)
-
(2007)
Proc. Natl Acad. Sci. USA
, vol.104
, pp. 462-466
-
-
Ben-Shem, A.1
Fass, D.2
Bibi, E.3
-
27
-
-
33847793631
-
Open-cap conformation of intramembrane protease GlpG
-
Wang, Y. & Ha, Y. Open-cap conformation of intramembrane protease GlpG. Proc. Natl Acad. Sci. USA 104, 2098-2102 (2007)
-
(2007)
Proc. Natl Acad. Sci. USA
, vol.104
, pp. 2098-2102
-
-
Wang, Y.1
Ha, Y.2
-
28
-
-
1542723495
-
The molecular structure and catalyticmechanismof a novel carboxyl peptidase fromScytalidium lignicolum
-
Fujinaga, M., Cherney, M. M., Oyama, H., Oda, K. & James, M. N. The molecular structure and catalyticmechanismof a novel carboxyl peptidase fromScytalidium lignicolum. Proc. Natl Acad. Sci. USA 101, 3364-3369 (2004)
-
(2004)
Proc. Natl Acad. Sci. USA
, vol.101
, pp. 3364-3369
-
-
Fujinaga, M.1
Cherney, M.M.2
Oyama, H.3
Oda, K.4
James, M.N.5
-
29
-
-
78449268297
-
The structural basis for catalysis and substrate specificity of a rhomboid protease
-
Vinothkumar, K. R. et al. The structural basis for catalysis and substrate specificity of a rhomboid protease. EMBO J. 29, 3797-3809 (2010)
-
(2010)
EMBO J.
, vol.29
, pp. 3797-3809
-
-
Vinothkumar, K.R.1
-
30
-
-
0034119314
-
The CaaX proteases, Afc1p and Rce1p, have overlapping but distinct substrate specificities
-
Trueblood, C. E. et al. The CaaX proteases, Afc1p and Rce1p, have overlapping but distinct substrate specificities. Mol. Cell. Biol. 20, 4381-4392 (2000)
-
(2000)
Mol. Cell. Biol.
, vol.20
, pp. 4381-4392
-
-
Trueblood, C.E.1
-
31
-
-
35748947246
-
A monoclonal antibody for G protein-coupled receptor crystallography
-
Day, P. W. et al. A monoclonal antibody for G protein-coupled receptor crystallography. Nature Methods 4, 927-929 (2007)
-
(2007)
Nature Methods
, vol.4
, pp. 927-929
-
-
Day, P.W.1
-
32
-
-
84862776818
-
G-protein-coupled receptor inactivation by an allosteric inverse-agonist antibody
-
Hino, T. et al. G-protein-coupled receptor inactivation by an allosteric inverse-agonist antibody. Nature 482, 237-240 (2012)
-
(2012)
Nature
, vol.482
, pp. 237-240
-
-
Hino, T.1
-
34
-
-
76449098262
-
PHENIX: A comprehensive Python-based system for macromolecular structure solution
-
Adams, P. D. et al. PHENIX: a comprehensive Python-based system for macromolecular structure solution. Acta Crystallogr. D 66, 213-221 (2010)
-
(2010)
Acta Crystallogr. D
, vol.66
, pp. 213-221
-
-
Adams, P.D.1
-
35
-
-
33644875355
-
Scaling and assessment of data quality
-
Evans, P. Scaling and assessment of data quality. Acta Crystallogr. D 62, 72-82 (2006)
-
(2006)
Acta Crystallogr. D
, vol.62
, pp. 72-82
-
-
Evans, P.1
-
36
-
-
79953737180
-
Overview of the CCP4 suite and current developments
-
Winn, M. D. et al. Overview of the CCP4 suite and current developments. Acta Crystallogr. D 67, 235-242 (2011)
-
(2011)
Acta Crystallogr. D
, vol.67
, pp. 235-242
-
-
Winn, M.D.1
-
37
-
-
34447508216
-
Phaser crystallographic software
-
McCoy, A. J. et al. Phaser crystallographic software. J. Appl. Cryst. 40, 658-674 (2007
-
(2007)
J. Appl. Cryst.
, vol.40
, pp. 658-674
-
-
McCoy, A.J.1
-
38
-
-
77950798648
-
Recent developments in classical density modification
-
Cowtan, K. Recent developments in classical density modification. Acta Crystallogr. D 66, 470-478 (2010)
-
(2010)
Acta Crystallogr. D
, vol.66
, pp. 470-478
-
-
Cowtan, K.1
-
39
-
-
77949535720
-
Features and development of Coot
-
Emsley, P., Lohkamp, B., Scott, W. G. & Cowtan, K. Features and development of Coot. Acta Crystallogr. D 66, 486-501 (2010)
-
(2010)
Acta Crystallogr. D
, vol.66
, pp. 486-501
-
-
Emsley, P.1
Lohkamp, B.2
Scott, W.G.3
Cowtan, K.4
-
40
-
-
34547592557
-
MolProbity: All-atomcontacts and structure validation for proteins and nucleic acids
-
Davis, I. W. et al. MolProbity: all-atomcontacts and structure validation for proteins and nucleic acids. Nucleic Acids Res. 35, W375-W383 (2007)
-
(2007)
Nucleic Acids Res.
, vol.35
-
-
Davis, I.W.1
-
41
-
-
79955716232
-
Rosetta FlexPepDock ab-initio: Simultaneous folding, docking and refinement of peptides onto their receptors
-
Raveh, B., London, N., Zimmerman, L. &Schueler-Furman, O. Rosetta FlexPepDock ab-initio: simultaneous folding, docking and refinement of peptides onto their receptors. PLoS ONE 6, e18934 (2011)
-
(2011)
PLoS ONE
, vol.6
-
-
Raveh, B.1
London, N.2
Zimmerman, L.3
Schueler-Furman, O.4
-
42
-
-
27344454932
-
GROMACS: Fast, flexible, and free
-
Van Der Spoel, D. et al. GROMACS: fast, flexible, and free. J. Comput. Chem. 26, 1701-1718 (2005)
-
(2005)
J. Comput. Chem.
, vol.26
, pp. 1701-1718
-
-
Van Der Spoel, D.1
-
43
-
-
0027136282
-
Comparative protein modelling by satisfaction of spatial restraints
-
S? ali, A. & Blundell, T. L. Comparative protein modelling by satisfaction of spatial restraints. J. Mol. Biol. 234, 779-815 (1993)
-
(1993)
J. Mol. Biol.
, vol.234
, pp. 779-815
-
-
Ali A, S.1
Blundell, T.L.2
-
45
-
-
0019873820
-
Estimation of globular protein secondary structure from circular dichroism
-
Provencher, S. W. &Glockner, J. Estimation of globular protein secondary structure from circular dichroism. Biochemistry 20, 33-37 (1981)
-
(1981)
Biochemistry
, vol.20
, pp. 33-37
-
-
Provencher, S.W.1
Glockner, J.2
-
46
-
-
0027447099
-
A self-consistent method for the analysis of protein secondary structure from circular dichroism
-
Sreerama, N. & Woody, R. W. A self-consistent method for the analysis of protein secondary structure from circular dichroism. Anal. Biochem. 209, 32-44 (1993)
-
(1993)
Anal. Biochem.
, vol.209
, pp. 32-44
-
-
Sreerama, N.1
Woody, R.W.2
-
47
-
-
0033042935
-
Estimation of the number of a-helical and b-strand segments in proteins using circular dichroism spectroscopy
-
Sreerama, N., Venyaminov, S. Y. & Woody, R. W. Estimation of the number of a-helical and b-strand segments in proteins using circular dichroism spectroscopy. Protein Sci. 8, 370-380 (1999)
-
(1999)
Protein Sci.
, vol.8
, pp. 370-380
-
-
Sreerama, N.1
Venyaminov, S.Y.2
Woody, R.W.3
-
48
-
-
3242877618
-
DICHROWEB, an online server for protein secondary structure analyses from circular dichroism spectroscopic data
-
Whitmore, L. & Wallace, B. A. DICHROWEB, an online server for protein secondary structure analyses from circular dichroism spectroscopic data. Nucleic Acids Res. 32, W668-W673 (2004)
-
(2004)
Nucleic Acids Res.
, vol.32
-
-
Whitmore, L.1
Wallace, B.A.2
-
49
-
-
33747855587
-
A reference database for circular dichroism spectroscopy covering fold and secondary structure space
-
Lees, J. G., Miles, A. J., Wien, F. & Wallace, B. A. A reference database for circular dichroism spectroscopy covering fold and secondary structure space. Bioinformatics 22, 1955-1962 (2006)
-
(2006)
Bioinformatics
, vol.22
, pp. 1955-1962
-
-
Lees, J.G.1
Miles, A.J.2
Wien, F.3
Wallace, B.A.4
-
50
-
-
40049099087
-
Microscale fluorescent thermal stability assay formembrane proteins
-
Alexandrov, A. I., Mileni, M., Chien, E. Y., Hanson, M. A. & Stevens, R. C. Microscale fluorescent thermal stability assay formembrane proteins. Structure 16, 351-359 (2008)
-
(2008)
Structure
, vol.16
, pp. 351-359
-
-
Alexandrov, A.I.1
Mileni, M.2
Chien, E.Y.3
Hanson, M.A.4
Stevens, R.C.5
-
51
-
-
84876937357
-
14-3-3 proteins interact with a hybrid prenyl-phosphorylation motif to inhibit G proteins
-
Riou, P. et al. 14-3-3 proteins interact with a hybrid prenyl-phosphorylation motif to inhibit G proteins. Cell 153, 640-653 (2013)
-
(2013)
Cell
, vol.153
, pp. 640-653
-
-
Riou, P.1
|