The Abi proteins and their involvement in bacteriocin self-immunity

Journal of Bacteriology

Volumn 192, Issue 8, 2010, Pages 2068-2076

  Kjos, Morten ^a   Snipen, Lars ^a   Salehian, Zhian ^a   Nes, Ingolf F ^a   Diep, Dzung B ^a  

^a NORWEGIAN UNIVERSITY OF LIFE SCIENCES   (Norway)

Author keywords

[No Author keywords available]

Indexed keywords

ABI PROTEIN; BACTERIAL PROTEIN; BACTERIOCIN; UNCLASSIFIED DRUG;

ANTIMICROBIAL ACTIVITY; ARTICLE; BACTERIAL GENE; BACTERIAL IMMUNITY; BACTERIAL STRAIN; GENE LOCUS; HOST; LACTOBACILLUS PLANTARUM; LACTOBACILLUS SAKEI; MOLECULAR RECOGNITION; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; PROTEIN DEGRADATION; SITE DIRECTED MUTAGENESIS;

BACTERIAL PROTEINS; BACTERIOCINS; LACTOBACILLUS; MUTAGENESIS, SITE-DIRECTED;

EUKARYOTA; LACTOBACILLUS PLANTARUM; LACTOBACILLUS SAKEI; POSIBACTERIA; PROKARYOTA; STREPTOCOCCUS PYOGENES;

EID: 77950652492     PISSN: 00219193     EISSN: None     Source Type: Journal    
DOI: 10.1128/JB.01553-09     Document Type: Article

References (48)

1. Allison, G. E., C. Fremaux, and T. R. Klaenhammer. 1994. Expansion of bacteriocin activity and host range upon complementation of two peptides encoded within the lactacin F operon. J. Bacteriol. 176:2235-2241.
2. Altschul, S. F., T. L. Madden, A. A. Schaffer, J. Zhang, Z. Zhang, W. Miller, and D. J. Lipman. 1997. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res. 25:3389-3402.
3. Aukrust, T. W., M. B. Brurberg, and I. F. Nes. 1995. Transformation of Lactobacillus by electroporation. Methods Mol. Biol. 47:201-208.
4. Axelsson, L., and A. Holck. 1995. The genes involved in production of and immunity to sakacin A, a bacteriocin from Lactobacillus sake Lb706. J. Bacteriol. 177:2125-2137.
5. Axelsson, L., T. Katla, M. Bjornslett, V. G. Eijsink, and A. Holck. 1998. A system for heterologous expression of bacteriocins in Lactobacillus sake. FEMS Microbiol. Lett. 168:137-143.
6. Begley, M., P. D. Cotter, C. Hill, and R. P. Ross. 2009. Identification of a novel two-peptide lantibiotic, lichenicidin, following rational genome mining for LanM proteins. Appl. Environ. Microbiol. 75:5451-5460.
7. W-dependent genes that provide intrinsic resistance to antimicrobial compounds produced by bacilli. Mol. Microbiol. 60:765-782.
8. Cotter, P. D., C. Hill, and R. P. Ross. 2005. Bacteriocins: developing innate immunity for food. Nat. Rev. Microbiol. 3:777-788.
9. Daeschel, M., M. C. McKenny, and L. C. McDonald. 1990. Bacteriocidal activity of Lactobacillus plantarum C11. Food Microbiol. 7:91-99.
10. Datta, V., S. M. Myskowski, L. A. Kwinn, D. N. Chiem, N. Varki, R. G. Kansal, M. Kotb, and V. Nizet. 2005. Mutational analysis of the group A streptococcal operon encoding streptolysin S and its virulence role in invasive infection. Mol. Microbiol. 56:681-695.
11. Diep, D. B., L. Godager, D. Brede, and I. F. Nes. 2006. Data mining and characterization of a novel pediocin-like bacteriocin system from the genome of Pediococcus pentosaceus ATCC 25745. Microbiology 152:1649-1659.
12. Diep, D. B., L. S. Håvarstein, and I. F. Nes. 1996. Characterization of the locus responsible for the bacteriocin production in Lactobacillus plantarum C11. J. Bacteriol. 178:4472-4483.
13. Diep, D. B., M. Skaugen, Z. Salehian, H. Holo, and I. F. Nes. 2007. Common mechanisms of target cell recognition and immunity for class II bacteriocins. Proc. Natl. Acad. Sci. USA 104:2384-2389.
14. Diep, D. B., D. Straume, M. Kjos, C. Torres, and I. F. Nes. 2009. An overview of the mosaic bacteriocin pln loci from Lactobacillus plantarum. Peptides 30:1562-1574.
15. Dolence, J. M., L. E. Steward, E. K. Dolence, D. H. Wong, and C. D. Poulter. 2000. Studies with recombinant Saccharomyces cerevisiae CaaX prenyl protease Rce1p. Biochemistry 39:4096-4104.
16. Ellermeier, C. D., and R. Losick. 2006. Evidence for a novel protease governing regulated intramembrane proteolysis and resistance to antimicrobial peptides in Bacillus subtilis. Genes Dev. 20:1911-1922.
17. Fimland, G., L. Johnsen, B. Dalhus, and J. Nissen-Meyer. 2005. Pediocin-like antimicrobial peptides (class IIa bacteriocins) and their immunity proteins: biosynthesis, structure, and mode of action. J. Pept. Sci. 11:688-696.
18. Finn, R. D., J. Tate, J. Mistry, P. C. Coggill, S. J. Sammut, H. R. Hotz, G. Ceric, K. Forslund, S. R. Eddy, E. L. Sonnhammer, and A. Bateman. 2008. The Pfam protein families database. Nucleic Acids Res. 36:D281-D288.
19. Fraley, C., and A. E. Raftery. 2006. MCLUST version 3 for R: normal mixture modeling and model-based clustering. Technical report no. 504. Department of Statistics, University of Washington, Seattle, WA.
20. Higuchi, R. 1990. Recombinant PCR, p. 177-183. In M. L. Innes, D. H. Gelfand, J. J. Sninsky, and T. J. White (ed.), PCR protocols. A guide to methods and applications. Academic Press Inc., San Diego, CA.
21. Holo, H., O. Nilssen, and I. F. Nes. 1991. Lactococcin A, a new bacteriocin from Lactococcus lactis subsp. cremoris: isolation and characterization of the protein and its gene. J. Bacteriol. 173:3879-3887.
22. Jimenez-Diaz, R., J. L. Ruiz-Barba, D. P. Cathcart, H. Holo, I. F. Nes, K. H. Sletten, and P. J. Warner. 1995. Purification and partial amino acid sequence of plantaricin S, a bacteriocin produced by Lactobacillus plantarum LPCO10, the activity of which depends on the complementary action of two peptides. Appl. Environ. Microbiol. 61:4459-4463.
23. Kim, E., P. Ambroziak, J. C. Otto, B. Taylor, M. Ashby, K. Shannon, P. J. Casey, and S. G. Young. 1999. Disruption of the mouse Rce1 gene results in defective Ras processing and mislocalization of Ras within cells. J. Biol. Chem. 274:8383-8390.
24. Kjos, M., I. F. Nes, and D. B. Diep. 2009. Class II one-peptide bacteriocins target a phylogenetically defined subgroup of mannose phosphotransferase systems on sensitive cells. Microbiology 155:2949-2961.
25. Lux, T., M. Nuhn, R. Hakenbeck, and P. Reichmann. 2007. Diversity of bacteriocins and activity spectrum in Streptococcus pneumoniae. J. Bacteriol. 189:7741-7751.
26. Majhenic, A. C., K. Venema, G. E. Allison, B. B. Matijasic, I. Rogelj, and T. R. Klaenhammer. 2004. DNA analysis of the genes encoding acidocin LF221 A and acidocin LF221 B, two bacteriocins produced by Lactobacillus gasseri LF221. Appl. Microbiol. Biotechnol. 63:705-714.
27. Makinen, P. L., D. B. Clewell, F. An, and K. K. Makinen. 1989. Purification and substrate specificity of a strongly hydrophobic extracellular metalloendopeptidase ("gelatinase") from Streptococcus faecalis (strain 0G1-10). J. Biol. Chem. 264:3325-3334.
28. Marciset, O., M. C. Jeronimus-Stratingh, B. Mollet, and B. Poolman. 1997. Thermophilin 13, a nontypical antilisterial poration complex bacteriocin, that functions without a receptor. J. Biol. Chem. 272:14277-14284.
29. Mathiesen, G., K. Huehne, L. Kroeckel, L. Axelsson, and V. G. Eijsink. 2005. Characterization of a new bacteriocin operon in sakacin P-producing Lactobacillus sakei, showing strong translational coupling between the bacteriocin and immunity genes. Appl. Environ. Microbiol. 71:3565-3574.
30. Møretrø, T., K. Naterstad, E. Wang, I. M. Aasen, S. Chaillou, M. Zagorec, and L. Axelsson. 2005. Sakacin P non-producing Lactobacillus sakei strains contain homologues of the sakacin P gene cluster. Res. Microbiol. 156:949-960.
31. Navarro, L., B. Rojo-Bezares, Y. Saenz, L. Diez, M. Zarazaga, F. Ruiz-Larrea, and C. Torres. 2008. Comparative study of the pln locus of the quorum-sensing regulated bacteriocin-producing L. plantarum J51 strain. Int. J. Food Microbiol. 128:390-394.
32. Nes, I. F., D. B. Diep, L. S. Havarstein, M. B. Brurberg, V. Eijsink, and H. Holo. 1996. Biosynthesis of bacteriocins in lactic acid bacteria. Antonie Van Leeuwenhoek 70:113-128. (Pubitemid 26355496)
33. Nes, I. F., S.-S. Yoon, and D. B. Diep. 2007. Ribosomally synthesized antimicrobial peptides (bacteriocins) in lactic acid bacteria: a review. Food Sci. Biotechnol. 16:675-690.
34. Nissen-Meyer, J., P. Rogne, C. Oppegard, H. S. Haugen, and P. E. Kristiansen. 2009. Structure-function relationships of the non-lanthionine- containing peptide (class II) bacteriocins produced by gram-positive bacteria. Curr. Pharm. Biotechnol. 10:19-37.
35. Nizet, V., B. Beall, D. J. Bast, V. Datta, L. Kilburn, D. E. Low, and J. C. De Azavedo. 2000. Genetic locus for streptolysin S production by group A streptococcus. Infect. Immun. 68:4245-4254.
36. Oppegard, C., G. Fimland, L. Thorbaek, and J. Nissen-Meyer. 2007. Analysis of the two-peptide bacteriocins lactococcin G and enterocin 1071 by site-directed mutagenesis. Appl. Environ. Microbiol. 73:2931-2938.
37. Oppegard, C., P. Rogne, L. Emanuelsen, P. E. Kristiansen, G. Fimland, and J. Nissen-Meyer. 2007. The two-peptide class II bacteriocins: structure, production, and mode of action. J. Mol. Microbiol. Biotechnol. 13:210-219.
38. Pei, J., and N. V. Grishin. 2001. Type II CAAX prenyl endopeptidases belong to a novel superfamily of putative membrane-bound metalloproteases. Trends Biochem. Sci. 26:275-277.
39. Ra, R., M. M. Beerthuyzen, W. M. de Vos, P. E. Saris, and O. P. Kuipers. 1999. Effects of gene disruptions in the nisin gene cluster of Lactococcus lactis on nisin production and producer immunity. Microbiology 145:1227-1233.
40. Sanchez, J., D. B. Diep, C. Herranz, I. F. Nes, L. M. Cintas, and P. E. Hernandez. 2007. Amino acid and nucleotide sequence, adjacent genes, and heterologous expression of hiracin JM79, a sec-dependent bacteriocin produced by Enterococcus hirae DCH5, isolated from Mallard ducks (Anas platyrhynchos). FEMS Microbiol. Lett. 270:227-236.
41. Schillinger, U., and F. K. Lucke. 1989. Antibacterial activity of Lactobacillus sake isolated from meat. Appl. Environ. Microbiol. 55:1901-1906.
42. Sedgley, C. M., D. B. Clewell, and S. E. Flannagan. 2009. Plasmid pAMS1-encoded, bacteriocin-related "Siblicide" in Enterococcus faecalis. J. Bacteriol. 191:3183-3188.
43. Sonnhammer, E. L., S. R. Eddy, and R. Durbin. 1997. Pfam: a comprehensive database of protein domain families based on seed alignments. Proteins 28:405-420.
44. Stein, T., S. Heinzmann, I. Solovieva, and K. D. Entian. 2003. Function of Lactococcus lactis nisin immunity genes nisI and nisFEG after coordinated expression in the surrogate host Bacillus subtilis. J. Biol. Chem. 278:89-94. (Pubitemid 36043548)
45. Stephens, S. K., B. Floriano, D. P. Cathcart, S. A. Bayley, V. F. Witt, R. Jimenez-Diaz, P. J. Warner, and J. L. Ruiz-Barba. 1998. Molecular analysis of the locus responsible for production of plantaricin S, a two-peptide bacteriocin produced by Lactobacillus plantarum LPCO10. Appl. Environ. Microbiol. 64:1871-1877.
46. Tahara, T., M. Oshimura, C. Umezawa, and K. Kanatani. 1996. Isolation, partial characterization, and mode of action of acidocin J1132, a two-component bacteriocin produced by Lactobacillus acidophilus JCM 1132. Appl. Environ. Microbiol. 62:892-897.
47. van Belkum, M. J., B. J. Hayema, R. E. Jeeninga, J. Kok, and G. Venema. 1991. Organization and nucleotide sequences of two lactococcal bacteriocin operons. Appl. Environ. Microbiol. 57:492-498.
48. van de Guchte, M., J. M. van der Vossen, J. Kok, and G. Venema. 1989. Construction of a lactococcal expression vector: expression of hen egg white lysozyme in Lactococcus lactis subsp. lactis. Appl. Environ. Microbiol. 55: 224-228.