-
1
-
-
0035256698
-
Untangling the ErbB signalling network.
-
Yarden, Y., Sliwkowski, M. X., Untangling the ErbB signalling network. Nat. Rev. Mol. Cell. Biol. 2001, 2, 127-137.
-
(2001)
Nat. Rev. Mol. Cell. Biol.
, vol.2
, pp. 127-137
-
-
Yarden, Y.1
Sliwkowski, M.X.2
-
2
-
-
33745828702
-
EGF-ERBB signalling: Towards the systems level.
-
Citri, A., Yarden, Y., EGF-ERBB signalling: Towards the systems level. Nat. Rev. Mol. Cell. Biol. 2006, 7, 505-516.
-
(2006)
Nat. Rev. Mol. Cell. Biol.
, vol.7
, pp. 505-516
-
-
Citri, A.1
Yarden, Y.2
-
3
-
-
0035933795
-
Growth factor-specific signaling pathway stimulation and gene expression mediated by ErbB receptors.
-
Sweeney, C., Fambrough, D., Huard, C., Diamonti, A. J. et al., Growth factor-specific signaling pathway stimulation and gene expression mediated by ErbB receptors. J. Biol. Chem. 2001, 276, 22685-22698.
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 22685-22698
-
-
Sweeney, C.1
Fambrough, D.2
Huard, C.3
Diamonti, A.J.4
-
4
-
-
0034644539
-
Cell signaling by receptor tyrosine kinases.
-
Schlessinger, J., Cell signaling by receptor tyrosine kinases. Cell 2000, 103, 211-225.
-
(2000)
Cell
, vol.103
, pp. 211-225
-
-
Schlessinger, J.1
-
5
-
-
0033786922
-
Protein tyrosine kinase structure and function.
-
Hubbard, S. R., Till, J. H., Protein tyrosine kinase structure and function. Ann. Rev. Biochem. 2000, 69, 373-398.
-
(2000)
Ann. Rev. Biochem.
, vol.69
, pp. 373-398
-
-
Hubbard, S.R.1
Till, J.H.2
-
6
-
-
33751328082
-
ErbB receptors: New insights on mechanisms and biology.
-
Linggi, B., Carpenter, G., ErbB receptors: New insights on mechanisms and biology. Trends Cell. Biol. 2006, 16, 649-656.
-
(2006)
Trends Cell. Biol.
, vol.16
, pp. 649-656
-
-
Linggi, B.1
Carpenter, G.2
-
7
-
-
33746905531
-
Phosphotyrosine interactome of the ErbB-receptor kinase family.
-
2005.0008.
-
Schulze, W. X., Deng, L., Mann, M., Phosphotyrosine interactome of the ErbB-receptor kinase family. Mol. Syst. Biol. 2005, 1, 2005.0008.
-
(2005)
Mol. Syst. Biol.
, vol.1
-
-
Schulze, W.X.1
Deng, L.2
Mann, M.3
-
8
-
-
36248988538
-
Ligand-dependent responses of the ErbB signaling network: Experimental and modeling analyses.
-
Birtwistle, M. R., Hatakeyama, M., Yumoto, N., Ogunnaike, B. A. et al., Ligand-dependent responses of the ErbB signaling network: Experimental and modeling analyses. Mol. Syst. Biol. 2007, 3, 144.
-
(2007)
Mol. Syst. Biol.
, vol.3
, pp. 144
-
-
Birtwistle, M.R.1
Hatakeyama, M.2
Yumoto, N.3
Ogunnaike, B.A.4
-
9
-
-
33947170007
-
EGF-independent activation of cell-surface EGFreceptors harboring mutations found in gefitinib-sensitive lung cancer.
-
Choi, S. H., Mendrola, J. M., Lemmon, M. A., EGF-independent activation of cell-surface EGFreceptors harboring mutations found in gefitinib-sensitive lung cancer. Oncogene 2007, 26, 1567-1576.
-
(2007)
Oncogene
, vol.26
, pp. 1567-1576
-
-
Choi, S.H.1
Mendrola, J.M.2
Lemmon, M.A.3
-
10
-
-
33744788136
-
The impact of human EGFRkinase domain mutations on lung tumorigenesis and in vivo sensitivity to EGFR-targeted therapies.
-
Ji, H., Li, D., Chen, L., Shimamura, T. et al., The impact of human EGFRkinase domain mutations on lung tumorigenesis and in vivo sensitivity to EGFR-targeted therapies. Cancer Cell 2006, 9, 485-495.
-
(2006)
Cancer Cell
, vol.9
, pp. 485-495
-
-
Ji, H.1
Li, D.2
Chen, L.3
Shimamura, T.4
-
11
-
-
33745689525
-
ERBB2 kinase domain mutation in the lung squamous cell carcinoma.
-
Lee, J. W., Soung, Y. H., Kim, S. Y., Nam, S. W. et al., ERBB2 kinase domain mutation in the lung squamous cell carcinoma. Cancer Lett. 2006, 237, 89-94.
-
(2006)
Cancer Lett.
, vol.237
, pp. 89-94
-
-
Lee, J.W.1
Soung, Y.H.2
Kim, S.Y.3
Nam, S.W.4
-
12
-
-
34547470997
-
The major lung cancer-derived mutants of ERBB2 are oncogenic and are associated with sensitivity to the irreversible EGFR/ERBB2 inhibitor HKI-272.
-
Minami, Y., Shimamura, T., Shah, K., LaFramboise, T. et al., The major lung cancer-derived mutants of ERBB2 are oncogenic and are associated with sensitivity to the irreversible EGFR/ERBB2 inhibitor HKI-272. Oncogene 2007, 26, 5023-5027.
-
(2007)
Oncogene
, vol.26
, pp. 5023-5027
-
-
Minami, Y.1
Shimamura, T.2
Shah, K.3
LaFramboise, T.4
-
13
-
-
20144386787
-
Somatic mutations of the HER2 kinase domain in lung adenocarcinomas.
-
Shigematsu, H., Takahashi, T., Nomura, M., Majmudar, K. et al., Somatic mutations of the HER2 kinase domain in lung adenocarcinomas. Cancer Res. 2005, 65, 1642-1646.
-
(2005)
Cancer Res.
, vol.65
, pp. 1642-1646
-
-
Shigematsu, H.1
Takahashi, T.2
Nomura, M.3
Majmudar, K.4
-
14
-
-
33745441548
-
Detection of epidermal growth factor receptor and human epidermal growth factor receptor 2 activating mutations in lung adenocarcinoma by high-resolution melting amplicon analysis: Correlation with gene copy number, protein expression, and hormone receptor expression.
-
Willmore-Payne, C., Holden, J. A., Layfield, L. J., Detection of epidermal growth factor receptor and human epidermal growth factor receptor 2 activating mutations in lung adenocarcinoma by high-resolution melting amplicon analysis: Correlation with gene copy number, protein expression, and hormone receptor expression. Hum. Pathol. 2006, 37, 755-763.
-
(2006)
Hum. Pathol.
, vol.37
, pp. 755-763
-
-
Willmore-Payne, C.1
Holden, J.A.2
Layfield, L.J.3
-
15
-
-
0029053716
-
Cooperative signaling of ErbB3 and ErbB2 in neoplastic transformation and human mammary carcinomas.
-
Alimandi, M., Romano, A., Curia, M. C., Muraro, R. et al., Cooperative signaling of ErbB3 and ErbB2 in neoplastic transformation and human mammary carcinomas. Oncogene 1995, 10, 1813-1821.
-
(1995)
Oncogene
, vol.10
, pp. 1813-1821
-
-
Alimandi, M.1
Romano, A.2
Curia, M.C.3
Muraro, R.4
-
16
-
-
78650880204
-
HER3 and downstream pathways are involved in colonization of brain metastases from breast cancer.
-
R46.
-
Da Silva, L., Simpson, P., Smart, C., Cocciardi, S. et al., HER3 and downstream pathways are involved in colonization of brain metastases from breast cancer. Breast Cancer Res. 2010, 12, R46.
-
(2010)
Breast Cancer Res.
, vol.12
-
-
Da Silva, L.1
Simpson, P.2
Smart, C.3
Cocciardi, S.4
-
17
-
-
33745727112
-
HER2 kinase domain mutation results in constitutive phosphorylation and activation of HER2 and EGFR and resistance to EGFR tyrosine kinase inhibitors.
-
Wang, S. E., Narasanna, A., Perez-Torres, M., Xiang, B. et al., HER2 kinase domain mutation results in constitutive phosphorylation and activation of HER2 and EGFR and resistance to EGFR tyrosine kinase inhibitors. Cancer Cell 2006, 10, 25-38.
-
(2006)
Cancer Cell
, vol.10
, pp. 25-38
-
-
Wang, S.E.1
Narasanna, A.2
Perez-Torres, M.3
Xiang, B.4
-
18
-
-
56449104265
-
Mutation of ERBB2 provides a novel alternative mechanism for the ubiquitous activation of RAS-MAPK in ovarian serous low malignant potential tumors.
-
Anglesio, M. S., Arnold, J. M., George, J., Tinker, A. V. et al., Mutation of ERBB2 provides a novel alternative mechanism for the ubiquitous activation of RAS-MAPK in ovarian serous low malignant potential tumors. Mol. Cancer Res. 2008, 6, 1678-1690.
-
(2008)
Mol. Cancer Res.
, vol.6
, pp. 1678-1690
-
-
Anglesio, M.S.1
Arnold, J.M.2
George, J.3
Tinker, A.V.4
-
19
-
-
34547450199
-
The HER4 cytoplasmic domain, but not its C terminus, inhibits mammary cell proliferation.
-
Feng, S. M., Sartor, C. I., Hunter, D., Zhou, H. et al., The HER4 cytoplasmic domain, but not its C terminus, inhibits mammary cell proliferation. Mol. Endocrinol. 2007, 21, 1861-1876.
-
(2007)
Mol. Endocrinol.
, vol.21
, pp. 1861-1876
-
-
Feng, S.M.1
Sartor, C.I.2
Hunter, D.3
Zhou, H.4
-
20
-
-
44149123049
-
3rd, ErbB4/HER4: Role in mammary gland development, differentiation and growth inhibition.
-
Muraoka-Cook, R. S., Feng, S. M., Strunk, K. E., Earp, H. S., 3rd, ErbB4/HER4: Role in mammary gland development, differentiation and growth inhibition. J. Mammary Gland Biol. Neoplasia 2008, 13, 235-246.
-
(2008)
J. Mammary Gland Biol. Neoplasia
, vol.13
, pp. 235-246
-
-
Muraoka-Cook, R.S.1
Feng, S.M.2
Strunk, K.E.3
Earp, H.S.4
-
21
-
-
0037478651
-
Neural and mammary gland defects in ErbB4 knockout mice genetically rescued from embryonic lethality.
-
Tidcombe, H., Jackson-Fisher, A., Mathers, K., Stern, D. F. et al., Neural and mammary gland defects in ErbB4 knockout mice genetically rescued from embryonic lethality. Proc. Natl. Acad. Sci. USA 2003, 100, 8281-8286.
-
(2003)
Proc. Natl. Acad. Sci. USA
, vol.100
, pp. 8281-8286
-
-
Tidcombe, H.1
Jackson-Fisher, A.2
Mathers, K.3
Stern, D.F.4
-
22
-
-
21244475659
-
ErbB4/HER4 potentiates STAT5A transcriptional activity by regulating novel STAT5A serine phosphorylation events.
-
Clark, D. E., Williams, C. C., Duplessis, T. T., Moring, K. L. et al., ErbB4/HER4 potentiates STAT5A transcriptional activity by regulating novel STAT5A serine phosphorylation events. J. Biol. Chem. 2005, 280, 24175-24180.
-
(2005)
J. Biol. Chem.
, vol.280
, pp. 24175-24180
-
-
Clark, D.E.1
Williams, C.C.2
Duplessis, T.T.3
Moring, K.L.4
-
23
-
-
8444243682
-
The ErbB4/HER4 receptor tyrosine kinase regulates gene expression by functioning as a STAT5A nuclear chaperone.
-
Williams, C. C., Allison, J. G., Vidal, G. A., Burow, M. E. et al., The ErbB4/HER4 receptor tyrosine kinase regulates gene expression by functioning as a STAT5A nuclear chaperone. J. Cell Biol. 2004, 167, 469-478.
-
(2004)
J. Cell Biol.
, vol.167
, pp. 469-478
-
-
Williams, C.C.1
Allison, J.G.2
Vidal, G.A.3
Burow, M.E.4
-
24
-
-
33749322525
-
Integration of prolactin and glucocorticoid signaling at the beta-casein promoter and enhancer by ordered recruitment of specific transcription factors and chromatin modifiers.
-
Kabotyanski, E. B., Huetter, M., Xian, W., Rijnkels, M., Rosen, J. M., Integration of prolactin and glucocorticoid signaling at the beta-casein promoter and enhancer by ordered recruitment of specific transcription factors and chromatin modifiers. Mol. Endocrinol. 2006, 20, 2355-2368.
-
(2006)
Mol. Endocrinol.
, vol.20
, pp. 2355-2368
-
-
Kabotyanski, E.B.1
Huetter, M.2
Xian, W.3
Rijnkels, M.4
Rosen, J.M.5
-
25
-
-
69249142860
-
Lactogenic hormonal induction of long distance interactions between beta-casein gene regulatory elements.
-
Kabotyanski, E. B., Rijnkels, M., Freeman-Zadrowski, C., Buser, A. C. et al., Lactogenic hormonal induction of long distance interactions between beta-casein gene regulatory elements. J. Biol. Chem. 2009, 284, 22815-22824.
-
(2009)
J. Biol. Chem.
, vol.284
, pp. 22815-22824
-
-
Kabotyanski, E.B.1
Rijnkels, M.2
Freeman-Zadrowski, C.3
Buser, A.C.4
-
26
-
-
52949083209
-
3rd, Prolactin and ErbB4/HER4 signaling interact via janus kinase 2 to induce mammary epithelial cell gene expression differentiation.
-
Muraoka-Cook, R. S., Sandahl, M., Hunter, D., Miraglia, L., Earp, H. S., 3rd, Prolactin and ErbB4/HER4 signaling interact via janus kinase 2 to induce mammary epithelial cell gene expression differentiation. Mol. Endocrinol. 2008, 22, 2307-2321.
-
(2008)
Mol. Endocrinol.
, vol.22
, pp. 2307-2321
-
-
Muraoka-Cook, R.S.1
Sandahl, M.2
Hunter, D.3
Miraglia, L.4
Earp, H.S.5
-
27
-
-
33748288086
-
The intracellular domain of ErbB4 induces differentiation of mammary epithelial cells.
-
Muraoka-Cook, R. S., Sandahl, M., Husted, C., Hunter, D. et al., The intracellular domain of ErbB4 induces differentiation of mammary epithelial cells. Mol. Biol. Cell 2006, 17, 4118-4129.
-
(2006)
Mol. Biol. Cell
, vol.17
, pp. 4118-4129
-
-
Muraoka-Cook, R.S.1
Sandahl, M.2
Husted, C.3
Hunter, D.4
-
28
-
-
1442308347
-
Gene expression profiling of ErbB receptor and ligand-dependent transcription.
-
Amin, D. N., Perkins, A. S., Stern, D. F., Gene expression profiling of ErbB receptor and ligand-dependent transcription. Oncogene 2004, 23, 1428-1438.
-
(2004)
Oncogene
, vol.23
, pp. 1428-1438
-
-
Amin, D.N.1
Perkins, A.S.2
Stern, D.F.3
-
29
-
-
23944502850
-
Neuregulin-regulated gene expression in mammary carcinoma cells.
-
Amin, D. N., Tuck, D., Stern, D. F., Neuregulin-regulated gene expression in mammary carcinoma cells. Exp. Cell Res. 2005, 309, 12-23.
-
(2005)
Exp. Cell Res.
, vol.309
, pp. 12-23
-
-
Amin, D.N.1
Tuck, D.2
Stern, D.F.3
-
30
-
-
33644515295
-
Somatic mutations of the ERBB4 kinase domain in human cancers.
-
Soung, Y. H., Lee, J. W., Kim, S. Y., Wang, Y. P. et al., Somatic mutations of the ERBB4 kinase domain in human cancers. Int. J. Cancer 2006, 118, 1426-1429.
-
(2006)
Int. J. Cancer
, vol.118
, pp. 1426-1429
-
-
Soung, Y.H.1
Lee, J.W.2
Kim, S.Y.3
Wang, Y.P.4
-
31
-
-
65549104656
-
Somatic mutations of ErbB4: Selective loss-of-function phenotype affecting signal transduction pathways in cancer.
-
Tvorogov, D., Sundvall, M., Kurppa, K., Hollmen, M. et al., Somatic mutations of ErbB4: Selective loss-of-function phenotype affecting signal transduction pathways in cancer. J. Biol. Chem. 2009, 284, 5582-5591.
-
(2009)
J. Biol. Chem.
, vol.284
, pp. 5582-5591
-
-
Tvorogov, D.1
Sundvall, M.2
Kurppa, K.3
Hollmen, M.4
-
32
-
-
84868374977
-
Structural systems biology and multiscale signaling models.
-
Telesco, S. E., Radhakrishnan, R., Structural systems biology and multiscale signaling models. Ann. Biomed. Eng. 2012, 40, 2295-2306.
-
(2012)
Ann. Biomed. Eng.
, vol.40
, pp. 2295-2306
-
-
Telesco, S.E.1
Radhakrishnan, R.2
-
33
-
-
79956098237
-
A multiscale modeling approach to investigate molecular mechanisms of pseudokinase activation and drug resistance in the HER3/ErbB3 receptor tyrosine kinase signaling network.
-
Telesco, S. E., Shih, A. J., Jia, F., Radhakrishnan, R., A multiscale modeling approach to investigate molecular mechanisms of pseudokinase activation and drug resistance in the HER3/ErbB3 receptor tyrosine kinase signaling network. Mol. Biosyst. 2011, 7, 2066-2080.
-
(2011)
Mol. Biosyst.
, vol.7
, pp. 2066-2080
-
-
Telesco, S.E.1
Shih, A.J.2
Jia, F.3
Radhakrishnan, R.4
-
34
-
-
77952786405
-
A multiscale red blood cell model with accurate mechanics, rheology, and dynamics.
-
Fedosov, D. A., Caswell, B., Karniadakis, G. E., A multiscale red blood cell model with accurate mechanics, rheology, and dynamics. Biophys. J. 2010, 98, 2215-2225.
-
(2010)
Biophys. J.
, vol.98
, pp. 2215-2225
-
-
Fedosov, D.A.1
Caswell, B.2
Karniadakis, G.E.3
-
35
-
-
34249650622
-
A multiscale computational approach to dissect early events in the Erb family receptor mediated activation, differential signaling, and relevance to oncogenic transformations.
-
Liu, Y., Purvis, J., Shih, A., Weinstein, J. et al., A multiscale computational approach to dissect early events in the Erb family receptor mediated activation, differential signaling, and relevance to oncogenic transformations. Ann. Biomed. Eng. 2007, 35, 1012-1025.
-
(2007)
Ann. Biomed. Eng.
, vol.35
, pp. 1012-1025
-
-
Liu, Y.1
Purvis, J.2
Shih, A.3
Weinstein, J.4
-
36
-
-
77956507569
-
An integrative model for phytochrome B mediated photomorphogenesis: From protein dynamics to physiology.
-
e10721.
-
Rausenberger, J., Hussong, A., Kircher, S., Kirchenbauer, D. et al., An integrative model for phytochrome B mediated photomorphogenesis: From protein dynamics to physiology. PLoS One 2010, 5, e10721.
-
(2010)
PLoS One
, vol.5
-
-
Rausenberger, J.1
Hussong, A.2
Kircher, S.3
Kirchenbauer, D.4
-
37
-
-
56349159166
-
Molecular systems biology of ErbB1 signaling: Bridging the gap through multiscale modeling and high-performance computing.
-
Shih, A. J., Purvis, J., Radhakrishnan, R., Molecular systems biology of ErbB1 signaling: Bridging the gap through multiscale modeling and high-performance computing. Mol. Biosyst. 2008, 4, 1151-1159.
-
(2008)
Mol. Biosyst.
, vol.4
, pp. 1151-1159
-
-
Shih, A.J.1
Purvis, J.2
Radhakrishnan, R.3
-
38
-
-
77950793989
-
A multiscale model to investigate circadian rhythmicity of pacemaker neurons in the suprachiasmatic nucleus.
-
e1000706.
-
Vasalou, C., Henson, M. A., A multiscale model to investigate circadian rhythmicity of pacemaker neurons in the suprachiasmatic nucleus. PLoS Comput. Biol. 2010, 6, e1000706.
-
(2010)
PLoS Comput. Biol.
, vol.6
-
-
Vasalou, C.1
Henson, M.A.2
-
39
-
-
79953703252
-
Efficacy of tyrosine kinase inhibitors in the mutants of the epidermal growth factor receptor: A multiscale molecular/ systems model for phosphorylation and inhibition.
-
IRBVerlagStuttgart
-
Purvis, J., Liu, Y., Ilango, V., Radhakrishnan, R., Efficacy of tyrosine kinase inhibitors in the mutants of the epidermal growth factor receptor: A multiscale molecular/ systems model for phosphorylation and inhibition. Proc. Foundations in Systems Biology II 2007, IRBVerlagStuttgart, 289-294.
-
(2007)
Proc. Foundations in Systems Biology II
, pp. 289-294
-
-
Purvis, J.1
Liu, Y.2
Ilango, V.3
Radhakrishnan, R.4
-
40
-
-
40049099848
-
Mechanism of activation and inhibition of the HER4/ErbB4 kinase.
-
Qiu, C., Tarrant, M. K., Choi, S. H., Sathyamurthy, A. et al., Mechanism of activation and inhibition of the HER4/ErbB4 kinase. Structure 2008, 16, 460-467.
-
(2008)
Structure
, vol.16
, pp. 460-467
-
-
Qiu, C.1
Tarrant, M.K.2
Choi, S.H.3
Sathyamurthy, A.4
-
41
-
-
0347383758
-
Modeller: Generation and refinement of homology-based protein structure models.
-
Fiser, A., Sali, A., Modeller: Generation and refinement of homology-based protein structure models. Meth. Enzymol. 2003, 374, 461-491.
-
(2003)
Meth. Enzymol.
, vol.374
, pp. 461-491
-
-
Fiser, A.1
Sali, A.2
-
42
-
-
0027136282
-
Comparative protein modelling by satisfaction of spatial restraints.
-
Sali, A., Blundell, T. L., Comparative protein modelling by satisfaction of spatial restraints. J. Mol. Biol. 1993, 234, 779-815.
-
(1993)
J. Mol. Biol.
, vol.234
, pp. 779-815
-
-
Sali, A.1
Blundell, T.L.2
-
43
-
-
33745002702
-
An allosteric mechanism for activation of the kinase domain of epidermal growth factor receptor.
-
Zhang, X., Gureasko, J., Shen, K., Cole, P. A., Kuriyan, J., An allosteric mechanism for activation of the kinase domain of epidermal growth factor receptor. Cell 2006, 125, 1137-1149.
-
(2006)
Cell
, vol.125
, pp. 1137-1149
-
-
Zhang, X.1
Gureasko, J.2
Shen, K.3
Cole, P.A.4
Kuriyan, J.5
-
44
-
-
67449146917
-
The juxtamembrane region of the egf receptor functions as an activation domain.
-
Red Brewer, M., Choi, S. H., Alvarado, D., Moravcevic, K. et al., The juxtamembrane region of the egf receptor functions as an activation domain. Mol. Cell 2009, 34, 641-651.
-
(2009)
Mol. Cell
, vol.34
, pp. 641-651
-
-
Red Brewer, M.1
Choi, S.H.2
Alvarado, D.3
Moravcevic, K.4
-
45
-
-
37649013040
-
Epidermal growth factor receptor juxtamembrane region regulates allosteric tyrosine kinase activation.
-
Thiel, K. W., Carpenter, G., Epidermal growth factor receptor juxtamembrane region regulates allosteric tyrosine kinase activation. Proc. Natl. Acad. Sci. USA 2007, 104, 19238-19243.
-
(2007)
Proc. Natl. Acad. Sci. USA
, vol.104
, pp. 19238-19243
-
-
Thiel, K.W.1
Carpenter, G.2
-
46
-
-
70149117469
-
Hierarchical modeling of activation mechanisms in the ABL and EGFR kinase domains: Thermodynamic and mechanistic catalysts of kinase activation by cancer mutations.
-
e1000487.
-
Dixit, A., Verkhivker, G. M., Hierarchical modeling of activation mechanisms in the ABL and EGFR kinase domains: Thermodynamic and mechanistic catalysts of kinase activation by cancer mutations. PLoS Comput. Biol. 2009, 5, e1000487.
-
(2009)
PLoS Comput. Biol.
, vol.5
-
-
Dixit, A.1
Verkhivker, G.M.2
-
47
-
-
67650236882
-
Conformational dynamics of the EGFR kinase domain reveals structural features involved in activation.
-
Papakyriakou, A., Vourloumis, D., Tzortzatou-Stathopoulou, F., Karpusas, M., Conformational dynamics of the EGFR kinase domain reveals structural features involved in activation. Proteins 2009, 76, 375-386.
-
(2009)
Proteins
, vol.76
, pp. 375-386
-
-
Papakyriakou, A.1
Vourloumis, D.2
Tzortzatou-Stathopoulou, F.3
Karpusas, M.4
-
48
-
-
0041784950
-
All-atom empirical potential for molecular modeling and dynamics studies of proteins.
-
MacKerell, A. D., Bashford, D., Bellott, M., Dunbrack, R. L. et al., All-atom empirical potential for molecular modeling and dynamics studies of proteins. J. Phys. Chem. B 1998, 102, 3586-3616.
-
(1998)
J. Phys. Chem. B
, vol.102
, pp. 3586-3616
-
-
MacKerell, A.D.1
Bashford, D.2
Bellott, M.3
Dunbrack, R.L.4
-
49
-
-
0004016501
-
Comparison of simple potential functions for simulating liquid water.
-
Jorgensen, W. L., Chandrasekhar, J., Madura, J. D., Impey, R. W., Klein, M. L., Comparison of simple potential functions for simulating liquid water. J. Chem. Phys. 1983, 79, 926-935.
-
(1983)
J. Chem. Phys.
, vol.79
, pp. 926-935
-
-
Jorgensen, W.L.1
Chandrasekhar, J.2
Madura, J.D.3
Impey, R.W.4
Klein, M.L.5
-
50
-
-
36449007836
-
Constant pressure molecular dynamics simulation: The Langevin piston method.
-
Feller, S. E., Zhang, Y., Pastor, R. W., Brooks, B. R., Constant pressure molecular dynamics simulation: The Langevin piston method. J. Chem. Phys. 1995, 103, 4613-4621.
-
(1995)
J. Chem. Phys.
, vol.103
, pp. 4613-4621
-
-
Feller, S.E.1
Zhang, Y.2
Pastor, R.W.3
Brooks, B.R.4
-
51
-
-
27344436659
-
Scalable molecular dynamics with NAMD.
-
Phillips, J. C., Braun, R., Wang, W., Gumbart, J. et al., Scalable molecular dynamics with NAMD. J. Comput. Chem. 2005, 26, 1781-1802.
-
(2005)
J. Comput. Chem.
, vol.26
, pp. 1781-1802
-
-
Phillips, J.C.1
Braun, R.2
Wang, W.3
Gumbart, J.4
-
52
-
-
0029878720
-
VMD: Visual molecular dynamics.
-
Humphrey, W., Dalke, A., Schulten, K., VMD: Visual molecular dynamics. J. Mol. Graph. 1996, 14, 33-38.
-
(1996)
J. Mol. Graph.
, vol.14
, pp. 33-38
-
-
Humphrey, W.1
Dalke, A.2
Schulten, K.3
-
53
-
-
33749172039
-
Software news and updates. CARMA: A molecular dynamics analysis program.
-
Glykos, N. M., Software news and updates. CARMA: A molecular dynamics analysis program. J. Comput.Chem. 2006, 27, 1765-1768.
-
(2006)
J. Comput.Chem.
, vol.27
, pp. 1765-1768
-
-
Glykos, N.M.1
-
54
-
-
69849115198
-
Therapeutically targeting ErbB3: A key node in ligand-induced activation of the ErbB receptor-PI3K axis.
-
ra31.
-
Schoeberl, B., Pace, E. A., Fitzgerald, J. B., Harms, B. D. et al., Therapeutically targeting ErbB3: A key node in ligand-induced activation of the ErbB receptor-PI3K axis. Sci. Signal 2009, 2, ra31.
-
(2009)
Sci. Signal
, vol.2
-
-
Schoeberl, B.1
Pace, E.A.2
Fitzgerald, J.B.3
Harms, B.D.4
-
55
-
-
0037448456
-
Control mechanism of Jak/Stat signal transduction pathway.
-
Yamada, S., Shiono, S., Joo, A., Yoshimura, A., Control mechanism of Jak/Stat signal transduction pathway. FEBS Lett. 2003, 534, 190-196.
-
(2003)
FEBS Lett.
, vol.534
, pp. 190-196
-
-
Yamada, S.1
Shiono, S.2
Joo, A.3
Yoshimura, A.4
-
56
-
-
51249086247
-
SBML-SAT: A systems biology markup language (SBML) based sensitivity analysis tool.
-
Zi, Z., Zheng, Y., Rundell, A. E., Klipp, E., SBML-SAT: A systems biology markup language (SBML) based sensitivity analysis tool. BMC Bioinf. 2008, 9, 342.
-
(2008)
BMC Bioinf.
, vol.9
, pp. 342
-
-
Zi, Z.1
Zheng, Y.2
Rundell, A.E.3
Klipp, E.4
-
57
-
-
79953726111
-
Molecular dynamics analysis of conserved hydrophobic and hydrophilic bond interaction networks in ErbB family kinases.
-
Shih, A. J., Telesco, S. E., Choi, S. H., Lemmon, M.A., Radhakrishnan, R., Molecular dynamics analysis of conserved hydrophobic and hydrophilic bond interaction networks in ErbB family kinases. Biochem. J. 2011, 436, 241-251.
-
(2011)
Biochem. J.
, vol.436
, pp. 241-251
-
-
Shih, A.J.1
Telesco, S.E.2
Choi, S.H.3
Lemmon, M.A.4
Radhakrishnan, R.5
-
58
-
-
62649161772
-
Mapping the conformational transition in Src activation by cumulating the information from multiple molecular dynamics trajectories.
-
Yang, S., Banavali, N. K., Roux, B., Mapping the conformational transition in Src activation by cumulating the information from multiple molecular dynamics trajectories. Proc. Natl. Acad. Sci. USA 2009, 106, 3776-3781.
-
(2009)
Proc. Natl. Acad. Sci. USA
, vol.106
, pp. 3776-3781
-
-
Yang, S.1
Banavali, N.K.2
Roux, B.3
-
59
-
-
66149084032
-
Atomistic insights into regulatory mechanisms of the HER2 tyrosine kinase domain: A molecular dynamics study.
-
Telesco, S. E., Radhakrishnan, R., Atomistic insights into regulatory mechanisms of the HER2 tyrosine kinase domain: A molecular dynamics study. Biophys. J. 2009, 96, 2321-2334.
-
(2009)
Biophys. J.
, vol.96
, pp. 2321-2334
-
-
Telesco, S.E.1
Radhakrishnan, R.2
-
60
-
-
79956076840
-
Molecular simulation of structure, dynamics, and function in the HER2 receptor tyrosine kinase and relevance to cancer mutations.
-
Telesco, S. E., Shih, A. J., Liu, Y., Radhakrishnan, R., Molecular simulation of structure, dynamics, and function in the HER2 receptor tyrosine kinase and relevance to cancer mutations. Cancer Res. J. 2011, 4, 1-35.
-
(2011)
Cancer Res. J.
, vol.4
, pp. 1-35
-
-
Telesco, S.E.1
Shih, A.J.2
Liu, Y.3
Radhakrishnan, R.4
-
61
-
-
2342471392
-
Activating mutations in the epidermal growth factor receptor underlying responsiveness of non-small-cell lung cancer to gefitinib.
-
Lynch, T. J., Bell, D. W., Sordella, R., Gurubhagavatula, S. et al., Activating mutations in the epidermal growth factor receptor underlying responsiveness of non-small-cell lung cancer to gefitinib. New Engl. J. Med. 2004, 350, 2129-2139.
-
(2004)
New Engl. J. Med.
, vol.350
, pp. 2129-2139
-
-
Lynch, T.J.1
Bell, D.W.2
Sordella, R.3
Gurubhagavatula, S.4
-
62
-
-
2342624080
-
EGFR mutations in lung cancer: Correlation with clinical response to gefitinib therapy.
-
Paez, J. G., Janne, P. A., Lee, J. C., Tracy, S. et al., EGFR mutations in lung cancer: Correlation with clinical response to gefitinib therapy. Science 2004, 304, 1497-1500.
-
(2004)
Science
, vol.304
, pp. 1497-1500
-
-
Paez, J.G.1
Janne, P.A.2
Lee, J.C.3
Tracy, S.4
-
63
-
-
69249154741
-
EGFR mutation in kidney carcinoma confers sensitivity to gefitinib treatment: A case report.
-
Iyevleva, A. G., Novik, A. V., Moiseyenko, V. M., Imyanitov, E. N., EGFR mutation in kidney carcinoma confers sensitivity to gefitinib treatment: A case report. Urol. Oncol.-Semin Ori. 2009, 27, 548-550.
-
(2009)
Urol. Oncol.-Semin Ori.
, vol.27
, pp. 548-550
-
-
Iyevleva, A.G.1
Novik, A.V.2
Moiseyenko, V.M.3
Imyanitov, E.N.4
-
64
-
-
33947287270
-
Epidermal growth factor receptor mutants from human lung cancers exhibit enhanced catalytic activity and increased sensitivity to gefitinib.
-
Mulloy, R., Ferrand, A., Kim, Y., Sordella, R. et al., Epidermal growth factor receptor mutants from human lung cancers exhibit enhanced catalytic activity and increased sensitivity to gefitinib. Cancer Res. 2007, 67, 2325-2330.
-
(2007)
Cancer Res.
, vol.67
, pp. 2325-2330
-
-
Mulloy, R.1
Ferrand, A.2
Kim, Y.3
Sordella, R.4
-
65
-
-
4143066760
-
Gefitinib-sensitizing EGFR mutations in lung cancer activate anti-apoptotic pathways.
-
Sordella, R., Bell, D. W., Haber, D. A., Settleman, J., Gefitinib-sensitizing EGFR mutations in lung cancer activate anti-apoptotic pathways. Science 2004, 305, 1163-1167.
-
(2004)
Science
, vol.305
, pp. 1163-1167
-
-
Sordella, R.1
Bell, D.W.2
Haber, D.A.3
Settleman, J.4
-
66
-
-
77952338791
-
ErbB3/HER3 intracellular domain is competent to bind atp and catalyze autophosphorylation.
-
Shi, F., Telesco, S. E., Liu, Y., Radhakrishnan, R., Lemmon, M. A., ErbB3/HER3 intracellular domain is competent to bind atp and catalyze autophosphorylation. Proc. Natl. Acad. Sci. USA 2010, 107, 7692-7697.
-
(2010)
Proc. Natl. Acad. Sci. USA
, vol.107
, pp. 7692-7697
-
-
Shi, F.1
Telesco, S.E.2
Liu, Y.3
Radhakrishnan, R.4
Lemmon, M.A.5
-
67
-
-
79953684580
-
Analysis of somatic mutations in cancer: Molecular mechanisms of activation in the ErbB family of receptor tyrosine kinases.
-
Shih, A. J., Telesco, S. E., Radhakrishnan, R., Analysis of somatic mutations in cancer: Molecular mechanisms of activation in the ErbB family of receptor tyrosine kinases. Cancers 2011, 3, 1195-1231.
-
(2011)
Cancers
, vol.3
, pp. 1195-1231
-
-
Shih, A.J.1
Telesco, S.E.2
Radhakrishnan, R.3
|