Software news and updates carma: A molecular dynamics analysis program

Journal of Computational Chemistry

Volumn 27, Issue 14, 2006, Pages 1765-1768

  Glykos, Nicholas M ^a  

^a DEMOCRITUS UNIVERSITY OF THRACE   (Greece)

Author keywords

Essential dynamics; Molecular dynamics; Principal component analysis; Trajectory viewer

Indexed keywords

COMPUTATIONAL METHODS; COMPUTER SOFTWARE; EIGENVALUES AND EIGENFUNCTIONS; MACROMOLECULES; MATRIX ALGEBRA; PRINCIPAL COMPONENT ANALYSIS;

CROSS-CORRELATION MATRICES; ESSENTIAL DYNAMICS; TRAJECTORY VIEWER;

MOLECULAR DYNAMICS;

WATER;

ARTICLE; CHEMISTRY; COMPUTER PROGRAM; COMPUTER SIMULATION; MACROMOLECULE; MOTION; PRINCIPAL COMPONENT ANALYSIS; ROTATION;

COMPUTER SIMULATION; MACROMOLECULAR SUBSTANCES; MOTION; PRINCIPAL COMPONENT ANALYSIS; ROTATION; SOFTWARE; WATER;

EID: 33749172039     PISSN: 01928651     EISSN: 1096987X     Source Type: Journal    
DOI: 10.1002/jcc.20482     Document Type: Article

References (7)

1. Garcia, A. E. Phys Rev Lett 1992, 68, 2696.
2. Amadei, A.; Linssen, A. B. M; Berendsen, H. J. C. Protein Struct Funct Genet 1993, 17, 412.
3. Mongan, J. J Comput Aid Mol Des 2004, 18, 433.
4. Vriend, G. J Mol Graph 1990, 8, 52.
5. Lindahl, E.; Hess, B.; van der Spoel D. J Mol Model 2001, 7, 306.
6. Kendall, R. A.; Apra, E.; Bernholdt, D. E.; Bylaska, E. J.; Dupius, M.; Fann, G. I.; Harrison, R. J.; Ju, J.; Nichols, J. A.; Nieplocha, J.; Straatsma, T. P.; Windus, T. L.; Wong, A. T. Comput Phys Commun 2000, 128, 260.
7. Kabsch, W. Acta Cryst 1976, A32, 922.