-
2
-
-
82955167894
-
NSP-Cas protein structures reveal a promiscuous interaction module in cell signaling
-
Mace, P. D., Wallez, Y., Dobaczewska, M. K., et al. (2011). NSP-Cas protein structures reveal a promiscuous interaction module in cell signaling. Nature Structural & Molecular Biology, 18, 1381-1387.
-
(2011)
Nature Structural & Molecular Biology
, vol.18
, pp. 1381-1387
-
-
Mace, P.D.1
Wallez, Y.2
Dobaczewska, M.K.3
-
3
-
-
28844479472
-
The Cas family docking protein, HEF1, promotes the formation of neurite-like membrane extensions
-
Bargon, S. D., Gunning, P. W., & O'Neill, G. M. (2005). The Cas family docking protein, HEF1, promotes the formation of neurite-like membrane extensions. Biochimica et Biophysica Acta, 1746, 143-154.
-
(2005)
Biochimica Et Biophysica Acta
, vol.1746
, pp. 143-154
-
-
Bargon, S.D.1
Gunning, P.W.2
O'Neill, G.M.3
-
4
-
-
0037011055
-
FRNK blocks v-Src-stimulated invasion and experimental metastases without effects on cell motility or growth
-
Hauck, C. R., Hsia, D. A., Puente, X. S., Cheresh, D. A., & Schlaepfer, D. D. (2002). FRNK blocks v-Src-stimulated invasion and experimental metastases without effects on cell motility or growth. The EMBO Journal, 21, 6289-6302.
-
(2002)
The EMBO Journal
, vol.21
, pp. 6289-6302
-
-
Hauck, C.R.1
Hsia, D.A.2
Puente, X.S.3
Cheresh, D.A.4
Schlaepfer, D.D.5
-
5
-
-
21344443681
-
Crk-associated substrate tyrosine phosphorylation sites are critical for invasion and metastasis of SRC-transformed cells
-
Brábek, J., Constancio, S. S., Siesser, P. F., et al. (2005). Crk-associated substrate tyrosine phosphorylation sites are critical for invasion and metastasis of SRC-transformed cells. Molecular Cancer Research, 3, 307-315.
-
(2005)
Molecular Cancer Research
, vol.3
, pp. 307-315
-
-
Brábek, J.1
Constancio, S.S.2
Siesser, P.F.3
-
6
-
-
12244263457
-
Novel function of chat in controlling cell adhesion via Cas-Crk-C3G-pathway-mediated Rap1 activation
-
Sakakibara, A., Ohba, Y., Kurokawa, K., Matsuda, M., & Hattori, S. (2002). Novel function of chat in controlling cell adhesion via Cas-Crk-C3G-pathway-mediated Rap1 activation. Journal of Cell Science, 115, 4915-4924.
-
(2002)
Journal of Cell Science
, vol.115
, pp. 4915-4924
-
-
Sakakibara, A.1
Ohba, Y.2
Kurokawa, K.3
Matsuda, M.4
Hattori, S.5
-
7
-
-
0033584466
-
p130(Cas), an assembling molecule of actin filaments, promotes cell movement, cell migration, and cell spreading in fibroblasts
-
Honda, H., Nakamoto, T., Sakai, R., & Hirai, R. (1999). p130(Cas), an assembling molecule of actin filaments, promotes cell movement, cell migration, and cell spreading in fibroblasts. Biochemical and Biophysical Research Communications, 262, 25-30.
-
(1999)
Biochemical and Biophysical Research Communications
, vol.262
, pp. 25-30
-
-
Honda, H.1
Nakamoto, T.2
Sakai, R.3
Hirai, R.4
-
8
-
-
58849146735
-
Structural insights into the association between BCAR3 and Cas family members, an atypical complex implicated in anti-oestrogen resistance
-
Garron, M. L., Arsenieva, D., Zhong, J., et al. (2009). Structural insights into the association between BCAR3 and Cas family members, an atypical complex implicated in anti-oestrogen resistance. Journal of Molecular Biology, 386, 190-203.
-
(2009)
Journal of Molecular Biology
, vol.386
, pp. 190-203
-
-
Garron, M.L.1
Arsenieva, D.2
Zhong, J.3
-
9
-
-
77956194979
-
The adaptor protein sh2d3c is critical for marginal zone B cell development and function
-
Al-Shami, A., Wilkins, C., Crisostomo, J., Seshasayee, D., Martin, F., Xu, N., et al. (2010). The adaptor protein sh2d3c is critical for marginal zone B cell development and function. Journal of Immunology, 185, 327-334.
-
(2010)
Journal of Immunology
, vol.185
, pp. 327-334
-
-
Al-Shami, A.1
Wilkins, C.2
Crisostomo, J.3
Seshasayee, D.4
Martin, F.5
Xu, N.6
-
10
-
-
77950605242
-
CAS proteins in normal and pathological cell growth control
-
Tikhmyanova, N., Little, J. L., & Golemis, E. A. (2010). CAS proteins in normal and pathological cell growth control. Cellular and Molecular Life Sciences, 67, 1025-1048.
-
(2010)
Cellular and Molecular Life Sciences
, vol.67
, pp. 1025-1048
-
-
Tikhmyanova, N.1
Little, J.L.2
Golemis, E.A.3
-
11
-
-
78650442669
-
SHEP1 partners with CasL to promote marginal zone B-cell maturation
-
Browne, C. D., Hoefer, M. M., Chintalapati, S. K., et al. (2010). SHEP1 partners with CasL to promote marginal zone B-cell maturation. Proceedings of the National Academy of Sciences of the United States of America, 107, 18944-18949.
-
(2010)
Proceedings of the National Academy of Sciences of the United States of America
, vol.107
, pp. 18944-18949
-
-
Browne, C.D.1
Hoefer, M.M.2
Chintalapati, S.K.3
-
12
-
-
79952698124
-
BCAR3/AND-34 can signal independent of complex formation with CAS family members of the presence of p130Cas
-
Borre, P. V., Near, R. I., Makkinje, A., Mostoslavsky, G., & Lerner, A. (2011). BCAR3/AND-34 can signal independent of complex formation with CAS family members of the presence of p130Cas. Cell Signalling, 23, 1030-1040.
-
(2011)
Cell Signalling
, vol.23
, pp. 1030-1040
-
-
Borre, P.V.1
Near, R.I.2
Makkinje, A.3
Mostoslavsky, G.4
Lerner, A.5
-
13
-
-
0032559562
-
CAS/Crk coupling serves as a 'molecular switch" for induction of cell migration
-
Klemke, R. L., Leng, J., Molander, R., et al. (1998). CAS/Crk coupling serves as a 'molecular switch" for induction of cell migration. Journal of Cell Biology, 140, 961-972.
-
(1998)
Journal of Cell Biology
, vol.140
, pp. 961-972
-
-
Klemke, R.L.1
Leng, J.2
Molander, R.3
-
14
-
-
84864771186
-
In silico investigation of molecular mechanism of laminopathy cause by a point mutation (R482 W) in lamin A/C protein
-
Rajendran, V., Purohit, R., & Sethumadhavan, R. (2012). In silico investigation of molecular mechanism of laminopathy cause by a point mutation (R482 W) in lamin A/C protein. Amino Acids, 43, 603-615.
-
(2012)
Amino Acids
, vol.43
, pp. 603-615
-
-
Rajendran, V.1
Purohit, R.2
Sethumadhavan, R.3
-
15
-
-
79959449643
-
Studies on adaptability of binding residues and flap region of TMC-114 resistance HIV-1 protease mutants
-
Purohit, R., Rajendran, V., & Sethumadhavan, R. (2011). Studies on adaptability of binding residues and flap region of TMC-114 resistance HIV-1 protease mutants. Journal of Biomolecular Structure & Dynamics, 29, 137-152.
-
(2011)
Journal of Biomolecular Structure & Dynamics
, vol.29
, pp. 137-152
-
-
Purohit, R.1
Rajendran, V.2
Sethumadhavan, R.3
-
16
-
-
77956634216
-
Structural basis for the resilience of Darunavir (TMC114) resistance major flap mutations of HIV-1 protease
-
Purohit, R., & Sethumadhavan, R. (2009). Structural basis for the resilience of Darunavir (TMC114) resistance major flap mutations of HIV-1 protease. Interdisciplinary Reviews, 1, 320-328.
-
(2009)
Interdisciplinary Reviews
, vol.1
, pp. 320-328
-
-
Purohit, R.1
Sethumadhavan, R.2
-
17
-
-
79958089433
-
Relationship between mutation of serine residue at 315th position in M. tuberculosis catalase-peroxidase enzyme and isoniazid susceptibility: An in silico analysis
-
Purohit, R., Rajendran, V., & Sethumadhavan, R. (2011). Relationship between mutation of serine residue at 315th position in M. tuberculosis catalase-peroxidase enzyme and isoniazid susceptibility: An in silico analysis. Journal of Molecular Modelling, 17, 869-877.
-
(2011)
Journal of Molecular Modelling
, vol.17
, pp. 869-877
-
-
Purohit, R.1
Rajendran, V.2
Sethumadhavan, R.3
-
18
-
-
41549120492
-
Studies on flexibility and binding affinity of Asp25 of HIV-1 protease mutants
-
Purohit, R., Rajasekaran, R., Sudandiradoss, C., et al. (2008). Studies on flexibility and binding affinity of Asp25 of HIV-1 protease mutants. International Journal of Biological Macromolecules, 42, 386-391.
-
(2008)
International Journal of Biological Macromolecules
, vol.42
, pp. 386-391
-
-
Purohit, R.1
Rajasekaran, R.2
Sudandiradoss, C.3
-
19
-
-
84861790146
-
Computational investigation of pathogenic nsSNPs in CEP63 protein
-
Kumar, A., & Purohit, R. (2012). Computational investigation of pathogenic nsSNPs in CEP63 protein. Gene, 503, 75-82.
-
(2012)
Gene
, vol.503
, pp. 75-82
-
-
Kumar, A.1
Purohit, R.2
-
20
-
-
84872270918
-
Computational screening and molecular dynamics simulation of disease associated nsSNPs in CENP-E
-
Kumar, A., & Purohit, R. (2012). Computational screening and molecular dynamics simulation of disease associated nsSNPs in CENP-E. Mutation Research, 738-739, 28-37.
-
(2012)
Mutation Research
, vol.738-739
, pp. 28-37
-
-
Kumar, A.1
Purohit, R.2
-
21
-
-
84872379319
-
Mutational analysis of TYR gene and its structural consequences in OCA1A
-
Balu, K., & Rituraj, P. (2013). Mutational analysis of TYR gene and its structural consequences in OCA1A. Gene, 513, 184-195.
-
(2013)
Gene
, vol.513
, pp. 184-195
-
-
Balu, K.1
Rituraj, P.2
-
22
-
-
84867464864
-
In silico prediction of a disease-associated STIL mutant and its affect on the recruitment of centromere protein J (CENPJ)
-
Kumar, A., Rajendran, V., Sethumadhavan, R., & Purohit, R. (2012). In silico prediction of a disease-associated STIL mutant and its affect on the recruitment of centromere protein J (CENPJ). FEBS Open Biology, 2, 285-293.
-
(2012)
FEBS Open Biology
, vol.2
, pp. 285-293
-
-
Kumar, A.1
Rajendran, V.2
Sethumadhavan, R.3
Purohit, R.4
-
23
-
-
84867629652
-
Computational centrosomics: An approach to understand the dynamic behaviour of centrosome
-
Kumar, A., & Purohit, R. (2012). Computational centrosomics: An approach to understand the dynamic behaviour of centrosome. Gene, 511, 125-126.
-
(2012)
Gene
, vol.511
, pp. 125-126
-
-
Kumar, A.1
Purohit, R.2
-
24
-
-
0033954256
-
The protein data bank
-
Berman, H. M., Westbrook, J., Feng, Z., et al. (2000). The protein data bank. Nucleic Acids Research, 28, 235-242.
-
(2000)
Nucleic Acids Research
, vol.28
, pp. 235-242
-
-
Berman, H.M.1
Westbrook, J.2
Feng, Z.3
-
26
-
-
46249092554
-
GROMACS 4: Algorithms for highly efficient, load-balanced, and scalable molecular simulation
-
Hess, B., Kutzner, C., Spoel, D. V. D., & Lindahl, E. (2008). GROMACS 4: Algorithms for highly efficient, load-balanced, and scalable molecular simulation. Journal of Chemical Theory and Computation, 4, 435-447.
-
(2008)
Journal of Chemical Theory and Computation
, vol.4
, pp. 435-447
-
-
Hess, B.1
Kutzner, C.2
Spoel, D.V.D.3
Lindahl, E.4
-
27
-
-
0037442962
-
HADDOCK: A protein-protein docking approach based on biochemical or biophysical information
-
Dominguez, C., Boelens, R., & Bonvin, A. M. (2003). HADDOCK: A protein-protein docking approach based on biochemical or biophysical information. Journal of the American Chemical Society, 125, 1731-1737.
-
(2003)
Journal of the American Chemical Society
, vol.125
, pp. 1731-1737
-
-
Dominguez, C.1
Boelens, R.2
Bonvin, A.M.3
-
28
-
-
77955391393
-
The HADDOCK web server for data driven biomolecular docking
-
de Vries, S. J., van Dijk, M., & Bonvin, A. M. J. J. (2010). The HADDOCK web server for data driven biomolecular docking. Nature Protocols, 5, 883-897.
-
(2010)
Nature Protocols
, vol.5
, pp. 883-897
-
-
de Vries, S.J.1
van Dijk, M.2
Bonvin, A.M.J.J.3
-
29
-
-
0028907436
-
Calculation of protein structures with ambiguous distance restraints. Automated assignment of ambiguous NOE crosspeaks and disulphide connectivities
-
Nilges, M. (1995). Calculation of protein structures with ambiguous distance restraints. Automated assignment of ambiguous NOE crosspeaks and disulphide connectivities. Journal of Molecular Biology, 245, 645-660.
-
(1995)
Journal of Molecular Biology
, vol.245
, pp. 645-660
-
-
Nilges, M.1
-
30
-
-
0031566434
-
Automated NOESY interpretation with ambiguous distance restraints: The refined NMR solution structure of the pleckstrin homology domain from beta-spectrin
-
Nilges, M., Macias, M. J., O'Donoghue, S. I., & Oschkinat, H. (1997). Automated NOESY interpretation with ambiguous distance restraints: The refined NMR solution structure of the pleckstrin homology domain from beta-spectrin. Journal of Molecular Biology, 269, 408-422.
-
(1997)
Journal of Molecular Biology
, vol.269
, pp. 408-422
-
-
Nilges, M.1
Macias, M.J.2
O'Donoghue, S.I.3
Oschkinat, H.4
-
31
-
-
3543012707
-
Crystallography & NMR system: A new software suite for macromolecular structure determination
-
Brunger, A. T., Adams, P. D., Clore, G. M., et al. (1998). Crystallography & NMR system: A new software suite for macromolecular structure determination. Acta Crystallographica. Section D, Biological Crystallography, 54, 905-921.
-
(1998)
Acta Crystallographica. Section D, Biological Crystallography
, vol.54
, pp. 905-921
-
-
Brunger, A.T.1
Adams, P.D.2
Clore, G.M.3
-
32
-
-
0028922586
-
LIGPLOT: A program to generate schematic diagrams of protein-ligand interactions
-
Wallace, A. C., Laskowski, R. A., & Thornton, J. M. (1995). LIGPLOT: A program to generate schematic diagrams of protein-ligand interactions. Protein Engineering, 8, 127-134.
-
(1995)
Protein Engineering
, vol.8
, pp. 127-134
-
-
Wallace, A.C.1
Laskowski, R.A.2
Thornton, J.M.3
-
33
-
-
0028304962
-
Satisfying hydrogen bonding potential in proteins
-
McDonald, I. K., & Thornton, J. M. (1994). Satisfying hydrogen bonding potential in proteins. Journal of Molecular Biology, 238, 777-793.
-
(1994)
Journal of Molecular Biology
, vol.238
, pp. 777-793
-
-
McDonald, I.K.1
Thornton, J.M.2
-
34
-
-
33750587438
-
Molecular dynamics with coupling to an external bath
-
Berendsen, H. J. C., Postma, J. P. M., van Gunsteren, W. F., et al. (1984). Molecular dynamics with coupling to an external bath. The Journal of Chemical Physics, 8, 3684-3690.
-
(1984)
The Journal of Chemical Physics
, vol.8
, pp. 3684-3690
-
-
Berendsen, H.J.C.1
Postma, J.P.M.2
van Gunsteren, W.F.3
-
35
-
-
0029170114
-
Molecular dynamics simulations on solvated biomolecular systems: The particle mesh Ewald method leads to stable trajectories of DNA, RNA, and proteins
-
Cheatham, T. E, I. I. I., Miller, J. L., Fox, T., et al. (1995). Molecular dynamics simulations on solvated biomolecular systems: The particle mesh Ewald method leads to stable trajectories of DNA, RNA, and proteins. Journal of the American Chemical Society, 14, 4193-4194.
-
(1995)
Journal of the American Chemical Society
, vol.14
, pp. 4193-4194
-
-
Cheatham III, T.E.1
Miller, J.L.2
Fox, T.3
-
36
-
-
33845430353
-
-
Beaverton, OR: Center for Coastal and Land-Margin Research, Oregon Graduate Institute of Science and Technology
-
Turner, P. J. (2005). XMGRACE, version 5. 1. 19. Beaverton, OR: Center for Coastal and Land-Margin Research, Oregon Graduate Institute of Science and Technology.
-
(2005)
XMGRACE, Version 5. 1. 19
-
-
Turner, P.J.1
-
37
-
-
0027441950
-
Essential dynamics of proteins
-
Amadei, A., Linssen, A. B., & Berendsen, H. J. C. (1993). Essential dynamics of proteins. Proteins, 17, 412-425.
-
(1993)
Proteins
, vol.17
, pp. 412-425
-
-
Amadei, A.1
Linssen, A.B.2
Berendsen, H.J.C.3
-
38
-
-
0036606483
-
Principle of docking: An overview of search algorithms and a guide to scoring functions
-
Halperin, I., Ma, B., Wolfson, H., & Nussinov, R. (2002). Principle of docking: An overview of search algorithms and a guide to scoring functions. Proteins, 47, 409-443.
-
(2002)
Proteins
, vol.47
, pp. 409-443
-
-
Halperin, I.1
Ma, B.2
Wolfson, H.3
Nussinov, R.4
-
39
-
-
0038359614
-
CAPRI: A critical assessment of predicted interactions
-
Janin, J., Henrick, K., Moult, J., et al. (2003). CAPRI: A critical assessment of predicted interactions. Proteins, 52, 2-9.
-
(2003)
Proteins
, vol.52
, pp. 2-9
-
-
Janin, J.1
Henrick, K.2
Moult, J.3
-
40
-
-
33746285812
-
Information-driven protein-DNA docking using HADDOCK: It is a matter of flexibility
-
Dijk, M. V., Dijk, A. D. V., Hsu, V., et al. (2006). Information-driven protein-DNA docking using HADDOCK: It is a matter of flexibility. Nucleic Acids Research, 34, 3317-3325.
-
(2006)
Nucleic Acids Research
, vol.34
, pp. 3317-3325
-
-
Dijk, M.V.1
Dijk, A.D.V.2
Hsu, V.3
-
41
-
-
66149102833
-
Modelling effects of human single nucleotide polymorphisms on protein-protein interactions
-
Teng, S., Madej, T., Panchenko, A., & Alexov, E. (2009). Modelling effects of human single nucleotide polymorphisms on protein-protein interactions. Biophysical Journal, 96, 2178-2188.
-
(2009)
Biophysical Journal
, vol.96
, pp. 2178-2188
-
-
Teng, S.1
Madej, T.2
Panchenko, A.3
Alexov, E.4
-
42
-
-
79957582046
-
In silico and in vitro investigations of the mutability of disease-causing missense mutation sites in spermine synthase
-
Zhang, Z., Norris, J., Schwartz, C., & Alexov, E. (2011). In silico and in vitro investigations of the mutability of disease-causing missense mutation sites in spermine synthase. PLoS ONE, 6(5), e20373.
-
(2011)
PLoS ONE
, vol.6
, Issue.5
-
-
Zhang, Z.1
Norris, J.2
Schwartz, C.3
Alexov, E.4
-
43
-
-
0000570024
-
Basis of biological specificity
-
Fersht, A. R. (1984). Basis of biological specificity. Trends in Biochemical Sciences, 9, 145-147.
-
(1984)
Trends in Biochemical Sciences
, vol.9
, pp. 145-147
-
-
Fersht, A.R.1
-
45
-
-
0023105721
-
Evaluation of the intrinsic binding energy from hydrogen bonding group in an enzyme inhibitor
-
Bartlett, P. A., & Marlowe, C. K. (1987). Evaluation of the intrinsic binding energy from hydrogen bonding group in an enzyme inhibitor. Science, 235, 569-571.
-
(1987)
Science
, vol.235
, pp. 569-571
-
-
Bartlett, P.A.1
Marlowe, C.K.2
-
46
-
-
0029984673
-
Evaluating electrostatic contributions to binding with the use of protein charge ladders
-
Gao, J., Mammen, M., & Whitesides, G. M. (1996). Evaluating electrostatic contributions to binding with the use of protein charge ladders. Science, 272, 535-537.
-
(1996)
Science
, vol.272
, pp. 535-537
-
-
Gao, J.1
Mammen, M.2
Whitesides, G.M.3
-
47
-
-
84880943928
-
Computational investigation of cancer-associated molecular mechanism in Aurora A (S155R) mutation
-
doi:10.1007/s12013-013-9524-9
-
Kumar, A., Rajendran, V., Sethumadhavan, R., & Purohit, R. (2013). Computational investigation of cancer-associated molecular mechanism in Aurora A (S155R) mutation. Cell Biochemistry and Biophysics,. doi: 10. 1007/s12013-013-9524-9.
-
(2013)
Cell Biochemistry and Biophysics
-
-
Kumar, A.1
Rajendran, V.2
Sethumadhavan, R.3
Purohit, R.4
-
48
-
-
84889685004
-
Drug resistance mechanism of PncA in mycobacterium tuberculosis
-
doi:10.1080/07391102.2012.759885
-
Rajendran, V., & Sethumadhavan, R. (2013). Drug resistance mechanism of PncA in mycobacterium tuberculosis. Journal of Biomolecular Structure & Dynamics,. doi: 10. 1080/07391102. 2012. 759885.
-
(2013)
Journal of Biomolecular Structure & Dynamics
-
-
Rajendran, V.1
Sethumadhavan, R.2
|