-
1
-
-
84863200223
-
Origins and evolution of microRNA genes in plant species
-
Nozawa M, Miura S, Nei M: Origins and evolution of microRNA genes in plant species. Genome Biol Evol 2012;4: 230-239.
-
(2012)
Genome Biol Evol
, vol.4
, pp. 230-239
-
-
Nozawa, M.1
Miura, S.2
Nei, M.3
-
2
-
-
58249088751
-
MicroRNAs: Target recognition and regulatory functions
-
Bartel DP. MicroRNAs: target recognition and regulatory functions. Cell 2009;136: 215-233.
-
(2009)
Cell
, vol.136
, pp. 215-233
-
-
Bartel, D.P.1
-
3
-
-
0027751663
-
The C. Elegans heterochnmic gene lin-4 encodes small RNAs with antisense complementarity to lin-14
-
Lee RC, Feinbaum RL, Ambros V: The C. elegans heterochnmic gene lin-4 encodes small RNAs with antisense complementarity to lin-14. Cell 1993;75: 843-854.
-
(1993)
Cell
, vol.75
, pp. 843-854
-
-
Lee, R.C.1
Feinbaum, R.L.2
Ambros, V.3
-
4
-
-
84860324470
-
Roles for microRNAs in conferring robustness to biological processes
-
Ebert MS, Sharp PA: Roles for microRNAs in conferring robustness to biological processes. Cell 2012;149: 515-524.
-
(2012)
Cell
, vol.149
, pp. 515-524
-
-
Ebert, M.S.1
Sharp, P.A.2
-
5
-
-
77958460848
-
Discovering conserved insect microRNAs from expressed sequence tags
-
Jia Q, Lin K, Liang J, Yu L, Li F: Discovering conserved insect microRNAs from expressed sequence tags. J Insect Physiol 2010;56: 1763-1769.
-
(2010)
J Insect Physiol
, vol.56
, pp. 1763-1769
-
-
Jia, Q.1
Lin, K.2
Liang, J.3
Yu, L.4
Li, F.5
-
6
-
-
84874071709
-
MicroRNAs as mediators of viral evasion of the immune system
-
Cullen BR: MicroRNAs as mediators of viral evasion of the immune system. Nat Immunol 2013;14: 205-210.
-
(2013)
Nat Immunol
, vol.14
, pp. 205-210
-
-
Cullen, B.R.1
-
7
-
-
84876335568
-
MicroRNA-27a regulates lipid metabolism and inhibits hepatitis C virus replication in human hepatoma cells
-
Shirasaki T, Honda M, Shimakami T, Horii R, Yamashita T, Sakai Y, Sakai A, Okada H, Watanabe R, Murakami S, Yi M, Lemon SM, Kaneko S: MicroRNA-27a Regulates Lipid Metabolism and Inhibits Hepatitis C Virus Replication in Human Hepatoma Cells. J Virol 2013;87: 5270-5286.
-
(2013)
J Virol
, vol.87
, pp. 5270-5286
-
-
Shirasaki, T.1
Honda, M.2
Shimakami, T.3
Horii, R.4
Yamashita, T.5
Sakai, Y.6
Sakai, A.7
Okada, H.8
Watanabe, R.9
Murakami, S.10
Yi, M.11
Lemon, S.M.12
Kaneko, S.13
-
8
-
-
84883750693
-
Micrornas and the genetic network in aging
-
doi: 10.1016/j. jmb.2013.01.023. [Epub ahead of print]
-
Inukai S, Slack F. MicroRNAs and the Genetic Network in Aging. J Mol Biol 2013; doi: 10.1016/j. jmb.2013.01.023. [Epub ahead of print].
-
(2013)
J Mol Biol
-
-
Inukai, S.1
Slack, F.2
-
9
-
-
77954664186
-
A viral microRNA down-regulates multiple cell cycle genes through mRNA 5'UTRs
-
Grey F, Tirabassi R, Meyers H, Wu G, McWeeney S, Hook L, Nelson JA: A viral microRNA down-regulates multiple cell cycle genes through mRNA 5'UTRs. PLoS Pathog 2010;6:e1000967.
-
(2010)
PLoS Pathog
, vol.6
-
-
Grey, F.1
Tirabassi, R.2
Meyers, H.3
Wu, G.4
McWeeney, S.5
Hook, L.6
Nelson, J.A.7
-
10
-
-
34250805982
-
MicroRNA targeting specificity in mammals: Determinants beyond seed pairing
-
Grimson A, Farh KK, Johnston WK, Garrett-Engele P, Lim LP, Bartel DP: MicroRNA targeting specificity in mammals: determinants beyond seed pairing. Mol Cell 2007;27: 91-105.
-
(2007)
Mol Cell
, vol.27
, pp. 91-105
-
-
Grimson, A.1
Farh, K.K.2
Johnston, W.K.3
Garrett-Engele, P.4
Lim, L.P.5
Bartel, D.P.6
-
11
-
-
34547441263
-
Target mRNAs are repressed as efficiently by microRNA-binding sites in the 5'UTR as in the 3' UTR
-
Lytle JR, Yario TA, Steitz JA: Target mRNAs are repressed as efficiently by microRNA-binding sites in the 5'UTR as in the 3' UTR. Proc Natl Acad Sci USA 2007;104: 9667-9672.
-
(2007)
Proc Natl Acad Sci USA
, vol.104
, pp. 9667-9672
-
-
Lytle, J.R.1
Yario, T.A.2
Steitz, J.A.3
-
13
-
-
79955379930
-
Vive la différence: Biogenesis and evolution of microRNAs in plants and animals
-
Axtell MJ, Westholm JO, Lai EC: Vive la différence: biogenesis and evolution of microRNAs in plants and animals. Genome Biol 2011;12: 221.
-
(2011)
Genome Biol
, vol.12
, pp. 221
-
-
Axtell, M.J.1
Westholm, J.O.2
Lai, E.C.3
-
14
-
-
84873450117
-
Deep sequencing reveals abundant noncanonical retroviral microRNAs in B-cell leukemia/lymphoma
-
Rosewick N, Momont M, Durkin K, Takeda H, Caiment F, Cleuter Y, Vernin C, Mortreux F, Wattel E, Burny A, Georges M, Van den Broeke A: Deep sequencing reveals abundant noncanonical retroviral microRNAs in B-cell leukemia/lymphoma. Proc Natl Acad Sci USA 2013;110: 2306-2311.
-
(2013)
Proc Natl Acad Sci USA
, vol.110
, pp. 2306-2311
-
-
Rosewick, N.1
Momont, M.2
Durkin, K.3
Takeda, H.4
Caiment, F.5
Cleuter, Y.6
Vernin, C.7
Mortreux, F.8
Wattel, E.9
Burny, A.10
Georges, M.11
Van Den Broeke, A.12
-
15
-
-
77349092849
-
Deep sequencing of small RNA libraries reveals dynamic regulation of conserved and novel microRNAs and microRNA-stars during silkworm development
-
Jagadeeswaran G, Zheng Y, Sumathipala N, Jiang H, Arrese EL, Soulages JL, Zhang W, Sunkar R: Deep sequencing of small RNA libraries reveals dynamic regulation of conserved and novel microRNAs and microRNA-stars during silkworm development. BMC Genomics 2010;11: 52: 1-18.
-
(2010)
BMC Genomics
, vol.11
, Issue.52
, pp. 1-18
-
-
Jagadeeswaran, G.1
Zheng, Y.2
Sumathipala, N.3
Jiang, H.4
Arrese, E.L.5
Soulages, J.L.6
Zhang, W.7
Sunkar, R.8
-
16
-
-
84872864743
-
On measuring miRNAs after transient transfection of mimics or antisense inhibitors
-
Thomson DW, Bracken CP, Szubert JM, Goodall GJ: On measuring miRNAs after transient transfection of mimics or antisense inhibitors. PLoS One 2013;8:e55214.
-
(2013)
PLoS One
, vol.8
-
-
Thomson, D.W.1
Bracken, C.P.2
Szubert, J.M.3
Goodall, G.J.4
-
17
-
-
78651271681
-
RepTar: A database of predicted cellular targets of host and viral miRNAs
-
Elefant N, Berger A, Shein H, Hofree M, Margalit H, Altuvia Y: RepTar: a database of predicted cellular targets of host and viral miRNAs. Nucleic Acids Res 2011;39:D188-94.
-
(2011)
Nucleic Acids Res
, vol.39
-
-
Elefant, N.1
Berger, A.2
Shein, H.3
Hofree, M.4
Margalit, H.5
Altuvia, Y.6
-
18
-
-
78651293534
-
MiRBase: Integrating microRNA annotation and deep-sequencing data
-
Kozomara A, Griffiths-Jones S: miRBase: integrating microRNA annotation and deep-sequencing data. Nucleic Acids Res 2011;D152-157.
-
(2011)
Nucleic Acids Res
-
-
Kozomara, A.1
Griffiths-Jones, S.2
-
19
-
-
38549102535
-
FlyBase Consortium: FlyBase: Integration and improvements to query tools
-
Wilson RJ, Goodman JL, Strelets VB: FlyBase Consortium: FlyBase: integration and improvements to query tools. Nucleic Acids Res 2008;D588-D593.
-
(2008)
Nucleic Acids Res
-
-
Wilson, R.J.1
Goodman, J.L.2
Strelets, V.B.3
-
20
-
-
12544255565
-
Recognition and cleavage of primary microRNA precursors by the nuclear processing enzyme Drosha
-
Zeng Y, Yi R, Cullen BR: Recognition and cleavage of primary microRNA precursors by the nuclear processing enzyme Drosha. EMBO J 2005;24: 138-148.
-
(2005)
EMBO J
, vol.24
, pp. 138-148
-
-
Zeng, Y.1
Yi, R.2
Cullen, B.R.3
-
21
-
-
60149088848
-
Origins and mechanisms of miRNAs and siRNAs
-
Carthew RW, Sontheimer EJ: Origins and mechanisms of miRNAs and siRNAs. Cell 2009;136: 642-655.
-
(2009)
Cell
, vol.136
, pp. 642-655
-
-
Carthew, R.W.1
Sontheimer, E.J.2
-
22
-
-
77955328547
-
The fate of miRNA strand through evolutionary analysis: Implication for degradation as merely carrier strand or potential regulatory molecule?
-
Guo L, Lu Z: The fate of miRNA strand through evolutionary analysis: implication for degradation as merely carrier strand or potential regulatory molecule? PLoS One 2010;5:e11387.
-
(2010)
PLoS One
, vol.5
-
-
Guo, L.1
Lu, Z.2
-
23
-
-
41649089309
-
The regulatory activity of microRNA species has substantial influence on microRNA and 3' UTR evolution
-
Okamura K, Phillips MD, Tyler DM, Duan H, Chou YT, Lai EC: The regulatory activity of microRNA species has substantial influence on microRNA and 3' UTR evolution. Nat Struct Mol Biol 2008;15: 354-363.
-
(2008)
Nat Struct Mol Biol
, vol.15
, pp. 354-363
-
-
Okamura, K.1
Phillips, M.D.2
Tyler, D.M.3
Duan, H.4
Chou, Y.T.5
Lai, E.C.6
-
24
-
-
84871447722
-
Passenger strand miRNA miR-31 regulates the phenotypes of oral cancer cells by targeting RhoA
-
Chang KW, Kao SY, Wu YH, Tsai MM, Tu HF, Liu CJ, Lui MT, Lin SC: Passenger strand miRNA miR-31 regulates the phenotypes of oral cancer cells by targeting RhoA. Oral Oncol 2013;49: 27-33.
-
(2013)
Oral Oncol
, vol.49
, pp. 27-33
-
-
Chang, K.W.1
Kao, S.Y.2
Wu, Y.H.3
Tsai, M.M.4
Tu, H.F.5
Liu, C.J.6
Lui, M.T.7
Lin, S.C.8
-
25
-
-
84884994860
-
MicroRNA Biogenesis and Turnover in Plants
-
[Epub ahead of print]
-
Rogers K, Chen X: microRNA Biogenesis and Turnover in Plants. Cold Spring Harb Symp Quant Biol 2013, [Epub ahead of print]
-
(2013)
Cold Spring Harb Symp Quant Biol
-
-
Rogers, K.1
Chen, X.2
-
26
-
-
60149086351
-
Origin, biogenesis, and activity of plant microRNAs
-
Voinnet O: Origin, biogenesis, and activity of plant microRNAs. Cell 2009;136: 669-687.
-
(2009)
Cell
, vol.136
, pp. 669-687
-
-
Voinnet, O.1
-
27
-
-
34247368510
-
Identification of nuclear dicing bodies containing proteins for microRNA biogenesis in living Arabidopsis plants
-
Fang Y and Spector DL: Identification of nuclear dicing bodies containing proteins for microRNA biogenesis in living Arabidopsis plants. Curr Biol 2007;17: 818-823.
-
(2007)
Curr Biol
, vol.17
, pp. 818-823
-
-
Fang, Y.1
Spector, D.L.2
-
28
-
-
31044434491
-
The interaction between DCL1 and HYL1 is important for efficient and precise processing of pri-miRNA in plant microRNA biogenesis
-
Kurihara Y, Takashi Y, Watanabe Y: The interaction between DCL1 and HYL1 is important for efficient and precise processing of pri-miRNA in plant microRNA biogenesis. RNA 2006;12: 206-212.
-
(2006)
RNA
, vol.12
, pp. 206-212
-
-
Kurihara, Y.1
Takashi, Y.2
Watanabe, Y.3
-
29
-
-
80053023566
-
A primate herpesvirus uses the integrator complex to generate viral microRNAs
-
Cazalla D, Xie M, Steitz JA: A primate herpesvirus uses the integrator complex to generate viral microRNAs. Mol Cell 2011;43: 982-992.
-
(2011)
Mol Cell
, vol.43
, pp. 982-992
-
-
Cazalla, D.1
Xie, M.2
Steitz, J.A.3
-
30
-
-
84873450117
-
Deep sequencing reveals abundant noncanonical retroviral microRNAs in B-cell leukemia/lymphoma
-
Rosewick N, Momont M, Durkin K, Takeda H, Caiment F, Cleuter Y, Vernin C, Mortreux F, Wattel E, Burny A, Georges M, Van den Broeke A: Deep sequencing reveals abundant noncanonical retroviral microRNAs in B-cell leukemia/lymphoma. Proc Natl Acad Sci USA 2013;110 : 2306-2311.
-
(2013)
Proc Natl Acad Sci USA
, vol.110
, pp. 2306-2311
-
-
Rosewick, N.1
Momont, M.2
Durkin, K.3
Takeda, H.4
Caiment, F.5
Cleuter, Y.6
Vernin, C.7
Mortreux, F.8
Wattel, E.9
Burny, A.10
Georges, M.11
Van Den Broeke, A.12
-
32
-
-
75649119703
-
Mature and functional viral miRNAs transcribed from novel RNA polymerase III promoters
-
Diebel KW, Smith AL, van Dyk LF: Mature and functional viral miRNAs transcribed from novel RNA polymerase III promoters. RNA 2010;16: 170-185.
-
(2010)
RNA
, vol.16
, pp. 170-185
-
-
Diebel, K.W.1
Smith, A.L.2
Van Dyk, L.F.3
-
33
-
-
73649109602
-
A mammalian herpesvirus uses noncanonical expression and processing mechanisms to generate viral MicroRNAs
-
Bogerd HP, Karnowski HW, Cai X, Shin J, Pohlers M, Cullen BR: A mammalian herpesvirus uses noncanonical expression and processing mechanisms to generate viral MicroRNAs. Mol Cell 2010;37: 135-142.
-
(2010)
Mol Cell
, vol.37
, pp. 135-142
-
-
Bogerd, H.P.1
Karnowski, H.W.2
Cai, X.3
Shin, J.4
Pohlers, M.5
Cullen, B.R.6
-
34
-
-
20844463414
-
Identification of microRNAs of the herpesvirus family
-
Pfeffer S, Sewer A, Lagos-Quintana M, Sheridan R, Sander C, Grässer FA, van Dyk LF, Ho CK, Shuman S, Chien M, Russo JJ, Ju J, Randall G, Lindenbach BD, Rice CM, Simon V, Ho DD, Zavolan M, Tuschl T: Identification of microRNAs of the herpesvirus family. Nat Methods 2005;2: 269-276.
-
(2005)
Nat Methods
, vol.2
, pp. 269-276
-
-
Pfeffer, S.1
Sewer, A.2
Lagos-Quintana, M.3
Sheridan, R.4
Sander, C.5
Grässer, F.A.6
Van Dyk, L.F.7
Ho, C.K.8
Shuman, S.9
Chien, M.10
Russo, J.J.11
Ju, J.12
Randall, G.13
Lindenbach, B.D.14
Rice, C.M.15
Simon, V.16
Ho, D.D.17
Zavolan, M.18
Tuschl, T.19
-
36
-
-
78651453511
-
Coexpression of an intronic microRNA and its host gene reveals a potential role formiR-483-5p as an IGF2 partner
-
Ma N, Wang X, Qiao Y, Li F, Hui Y, Zou C, Jin J, Lv G, Peng Y, Wang L, Huang H, Zhou L, Zheng X, Gao X: Coexpression of an intronic microRNA and its host gene reveals a potential role formiR-483-5p as an IGF2 partner. Mol Cell Endocrinol 2011;333: 96-101.
-
(2011)
Mol Cell Endocrinol
, vol.333
, pp. 96-101
-
-
Ma, N.1
Wang, X.2
Qiao, Y.3
Li, F.4
Hui, Y.5
Zou, C.6
Jin, J.7
Lv, G.8
Peng, Y.9
Wang, L.10
Huang, H.11
Zhou, L.12
Zheng, X.13
Gao, X.14
-
38
-
-
51349103700
-
Primary microRNA transcripts are processed co-transcriptionally
-
Morlando M, Ballarino M, Gromak N, Pagano F, Bozzoni I, Proudfoot NJ: Primary microRNA transcripts are processed co-transcriptionally. Nat Struct Mol Biol 2008;15: 902-909.
-
(2008)
Nat Struct Mol Biol
, vol.15
, pp. 902-909
-
-
Morlando, M.1
Ballarino, M.2
Gromak, N.3
Pagano, F.4
Bozzoni, I.5
Proudfoot, N.J.6
-
39
-
-
52649167919
-
An intronic microRNA silences genes that are functionally antagonistic to its host gene
-
Barik S: An intronic microRNA silences genes that are functionally antagonistic to its host gene. Nucleic Acids Res 2008;36: 5232-5241.
-
(2008)
Nucleic Acids Res
, vol.36
, pp. 5232-5241
-
-
Barik, S.1
-
40
-
-
77950546627
-
Intronic microRNAs support their host genes by mediating synergistic and antagonistic regulatory effects
-
Lutter D, Marr C, Krumsiek J, Lang EW: Intronic microRNAs support their host genes by mediating synergistic and antagonistic regulatory effects. BMC Genomics 2010;11: 224.
-
(2010)
BMC Genomics
, vol.11
, pp. 224
-
-
Lutter, D.1
Marr, C.2
Krumsiek, J.3
Lang, E.W.4
-
41
-
-
84861357388
-
Young intragenic miRNAs are less coexpressed with host genes than old ones: Implications of miRNA-host gene coevolution
-
He C, Li Z, Chen P, Huang H, Hurst LD, Chen J: Young intragenic miRNAs are less coexpressed with host genes than old ones: implications of miRNA-host gene coevolution. Nucleic Acids Res 2012;40: 4002-4012.
-
(2012)
Nucleic Acids Res
, vol.40
, pp. 4002-4012
-
-
He, C.1
Li, Z.2
Chen, P.3
Huang, H.4
Hurst, L.D.5
Chen, J.6
-
42
-
-
33845452609
-
Insect microRNAs: Structure, function and evolution
-
Behura SK: Insect microRNAs: Structure, function and evolution. Insect Biochem Mol Biol 2007;37: 3-9.
-
(2007)
Insect Biochem Mol Biol
, vol.37
, pp. 3-9
-
-
Behura, S.K.1
-
43
-
-
76349105277
-
Plant polycistronic precursors containing non-homologous microRNAs target transcripts encoding functionally related proteins
-
Merchan F, Boualem A, Crespi M, Frugier F: Plant polycistronic precursors containing non-homologous microRNAs target transcripts encoding functionally related proteins. Genome Biol 2009;10,R136.
-
(2009)
Genome Biol
, vol.10
-
-
Merchan, F.1
Boualem, A.2
Crespi, M.3
Frugier, F.4
-
44
-
-
84876352366
-
Structure, evolution and function of the bi-directionally transcribed iab-4/iab-8 microRNA locus in arthropods
-
Hui JH, Marco A, Hunt S, Melling J, Griffiths-Jones S, Ronshaugen M: Structure, evolution and function of the bi-directionally transcribed iab-4/iab-8 microRNA locus in arthropods. Nucleic Acids Res 2013;41: 3352-3361.
-
(2013)
Nucleic Acids Res
, vol.41
, pp. 3352-3361
-
-
Hui, J.H.1
Marco, A.2
Hunt, S.3
Melling, J.4
Griffiths-Jones, S.5
Ronshaugen, M.6
-
45
-
-
38149026919
-
A single Hox locus in Drosophila produces functional microRNAs from opposite DNA strands
-
Stark A, Bushati N, Jan CH, Kheradpour P, Hodges E, Brennecke J, Bartel DP, Cohen SM, Kellis M: A single Hox locus in Drosophila produces functional microRNAs from opposite DNA strands. Genes Dev 2008;22: 8-13.
-
(2008)
Genes Dev
, vol.22
, pp. 8-13
-
-
Stark, A.1
Bushati, N.2
Jan, C.H.3
Kheradpour, P.4
Hodges, E.5
Brennecke, J.6
Bartel, D.P.7
Cohen, S.M.8
Kellis, M.9
-
46
-
-
38149022486
-
Functionally distinct regulatory RNAs generated by bidirectional transcription and processing of microRNA loci
-
Tyler DM, Okamura K, Chung WJ, Hagen JS, Berezikov E, Hannon GJ, Lai EC: Functionally distinct regulatory RNAs generated by bidirectional transcription and processing of microRNA loci. Genes Dev 2008;22: 26-36.
-
(2008)
Genes Dev
, vol.22
, pp. 26-36
-
-
Tyler, D.M.1
Okamura, K.2
Chung, W.J.3
Hagen, J.S.4
Berezikov, E.5
Hannon, G.J.6
Lai, E.C.7
-
47
-
-
2342450524
-
Molecular evolution of a microRNA cluster
-
Tanzer A, Stadler PF: Molecular evolution of a microRNA cluster. J Mol Biol 2004;339: 327-335.
-
(2004)
J Mol Biol
, vol.339
, pp. 327-335
-
-
Tanzer, A.1
Stadler, P.F.2
-
48
-
-
34250776711
-
A family of human microRNA genes from miniature inverted-repeat transposable elements
-
Piriyapongsa J, Jordan IK: A family of human microRNA genes from miniature inverted-repeat transposable elements. PLoS One 2007;2:e203.
-
(2007)
PLoS One
, vol.2
-
-
Piriyapongsa, J.1
Jordan, I.K.2
-
49
-
-
57049169777
-
Evolution of Arabidopsis thaliana microRNAs from random sequences
-
Felippes FF, Schneeberger K, Dezulian T, Huson DH, Weigel D: Evolution of Arabidopsis thaliana microRNAs from random sequences. RNA 2008;14: 2455-2459.
-
(2008)
RNA
, vol.14
, pp. 2455-2459
-
-
Felippes, F.F.1
Schneeberger, K.2
Dezulian, T.3
Huson, D.H.4
Weigel, D.5
-
50
-
-
22844440427
-
Identification of hundreds of conserved and nonconserved human microRNAs
-
Bentwich I, Avniel A, Karov Y, Aharonov R, Gilad S, Barad O, Barzilai A, Einat P, Einav U, Meiri E, Sharon E, Spector Y, Bentwich Z: Identification of hundreds of conserved and nonconserved human microRNAs. Nat Genet 2005;37: 766-770.
-
(2005)
Nat Genet
, vol.37
, pp. 766-770
-
-
Bentwich, I.1
Avniel, A.2
Karov, Y.3
Aharonov, R.4
Gilad, S.5
Barad, O.6
Barzilai, A.7
Einat, P.8
Einav, U.9
Meiri, E.10
Sharon, E.11
Spector, Y.12
Bentwich, Z.13
-
51
-
-
77958462907
-
Origins and evolution of microRNA genes in Drosophila species
-
Nozawa M, Miura S, Nei M: Origins and evolution of microRNA genes in Drosophila species. Genome Biol Evol 2010; 2: 180-189.
-
(2010)
Genome Biol Evol
, vol.2
, pp. 180-189
-
-
Nozawa, M.1
Miura, S.2
Nei, M.3
-
53
-
-
58549086017
-
The deep evolution of metazoan microRNAs
-
Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ: The deep evolution of metazoan microRNAs. Evol Dev 2009;11: 50-68.
-
(2009)
Evol Dev
, vol.11
, pp. 50-68
-
-
Wheeler, B.M.1
Heimberg, A.M.2
Moy, V.N.3
Sperling, E.A.4
Holstein, T.W.5
Heber, S.6
Peterson, K.J.7
-
55
-
-
84872021739
-
Virus-encoded microRNAs: An overview and a look to the future
-
Kincaid RP, Sullivan CS: Virus-encoded microRNAs: an overview and a look to the future. PLoS Pathog 2012;8:e1003018.
-
(2012)
PLoS Pathog
, vol.8
-
-
Kincaid, R.P.1
Sullivan, C.S.2
-
56
-
-
84876074773
-
Complex role of microRNAs in HTLV-1 infections
-
Sampey GC, Van Duyne R, Currer R, Das R, Narayanan A, Kashanchi F: Complex role of microRNAs in HTLV-1 infections. Front Genet 2012;3: 295.
-
(2012)
Front Genet
, vol.3
, pp. 295
-
-
Sampey, G.C.1
Van Duyne, R.2
Currer, R.3
Das, R.4
Narayanan, A.5
Kashanchi, F.6
-
57
-
-
62749139614
-
HIV-1 TAR miRNA protects against apoptosis by altering cellular gene expression
-
Klase Z, Winograd R, Davis J, Carpio L, Hildreth R, Heydarian M, Fu S, McCaffrey T, Meiri E, Ayash- Rashkovsky M, Gilad S, Bentwich Z, Kashanchi F: HIV-1 TAR miRNA protects against apoptosis by altering cellular gene expression. Retrovirology 2009;6,18: 1-17.
-
(2009)
Retrovirology
, vol.6
, Issue.18
, pp. 1-17
-
-
Klase, Z.1
Winograd, R.2
Davis, J.3
Carpio, L.4
Hildreth, R.5
Heydarian, M.6
Fu, S.7
McCaffrey, T.8
Meiri, E.9
Ayash-Rashkovsky, M.10
Gilad, S.11
Bentwich, Z.12
Kashanchi, F.13
-
58
-
-
84864387168
-
A baculovirus-encoded MicroRNA (miRNA) suppresses its host miRNA biogenesis by regulating the exportin-5 cofactor Ran
-
Singh CP, Singh J, Nagaraju J: A baculovirus-encoded MicroRNA (miRNA) suppresses its host miRNA biogenesis by regulating the exportin-5 cofactor Ran. J Virol 2012;15: 7867-7879.
-
(2012)
J Virol
, vol.15
, pp. 7867-7879
-
-
Singh, C.P.1
Singh, J.2
Nagaraju, J.3
-
59
-
-
77956915143
-
Discovering microRNAs from Bombyx mori nucleopolyhedrosis virus
-
Singh J, Singh CP, Bhavani A, Nagaraju J: Discovering microRNAs from Bombyx mori nucleopolyhedrosis virus. Virology 2010;407: 120-128.
-
(2010)
Virology
, vol.407
, pp. 120-128
-
-
Singh, J.1
Singh, C.P.2
Bhavani, A.3
Nagaraju, J.4
-
60
-
-
84866158252
-
Role of MicroRNAs in insect host-microorganism interactions
-
48;
-
Asgari S: Role of MicroRNAs in insect host-microorganism interactions. Front Physiol 2011; 2,48;1-8
-
(2011)
Front Physiol
, vol.2
, pp. 1-8
-
-
Asgari, S.1
-
61
-
-
44649110160
-
Viral and cellular microRNAs as determinants of viral pathogenesis and immunity
-
Gottwein E, Cullen BR: Viral and cellular microRNAs as determinants of viral pathogenesis and immunity. Cell Host Microbe 2008;3: 375-387.
-
(2008)
Cell Host Microbe
, vol.3
, pp. 375-387
-
-
Gottwein, E.1
Cullen, B.R.2
-
62
-
-
25844528520
-
MicroRNAs and viral infection
-
Sullivan CS, Ganem D: MicroRNAs and viral infection. Mol Cell 2005;20: 3-7.
-
(2005)
Mol Cell
, vol.20
, pp. 3-7
-
-
Sullivan, C.S.1
Ganem, D.2
-
63
-
-
44449105456
-
Suppression of immediate-early viral gene expression by herpesvirus-coded microRNAs: Implications for latency
-
Murphy E, Vanicek J, Robins H, Shenk T, Levine AJ: Suppression of immediate-early viral gene expression by herpesvirus-coded microRNAs: implications for latency. Proc Natl Acad Sci USA 2008;105: 5453-5458.
-
(2008)
Proc Natl Acad Sci USA
, vol.105
, pp. 5453-5458
-
-
Murphy, E.1
Vanicek, J.2
Robins, H.3
Shenk, T.4
Levine, A.J.5
-
64
-
-
50949097481
-
An insect virus-encoded microRNA regulates viral replication
-
Hussain M, Taft RJ, Asgari S: An insect virus-encoded microRNA regulates viral replication. J Virol 2008;82: 9164-9170.
-
(2008)
J Virol
, vol.82
, pp. 9164-9170
-
-
Hussain, M.1
Taft, R.J.2
Asgari, S.3
-
65
-
-
58149145659
-
An Epstein-Barr virus-encoded microRNA targets PUMA to promote host cell survival
-
Choy EY, Siu KL, Kok KH, Lung RW, Tsang CM, To KF, Kwong DL, Tsao SW, Jin DY: An Epstein-Barr virus-encoded microRNA targets PUMA to promote host cell survival. J Exp Med 2008;205: 2551-2560.
-
(2008)
J Exp Med
, vol.205
, pp. 2551-2560
-
-
Choy, E.Y.1
Siu, K.L.2
Kok, K.H.3
Lung, R.W.4
Tsang, C.M.5
To, K.F.6
Kwong, D.L.7
Tsao, S.W.8
Jin, D.Y.9
-
66
-
-
33746018653
-
Anti-apoptotic function of a microRNA encoded by the HSV-1 latency-associated transcript
-
Gupta A, Gartner JJ, Sethupathy P, Hatzigeorgiou AG, Fraser NW: Anti-apoptotic function of a microRNA encoded by the HSV-1 latency-associated transcript. Nature 2006;442: 82-85.
-
(2006)
Nature
, vol.442
, pp. 82-85
-
-
Gupta, A.1
Gartner, J.J.2
Sethupathy, P.3
Hatzigeorgiou, A.G.4
Fraser, N.W.5
-
67
-
-
77951443166
-
A human herpesvirus microRNA inhibits p21 expression and attenuates p21- mediated cell cycle arrest
-
Gottwein E, Cullen BR: A human herpesvirus microRNA inhibits p21 expression and attenuates p21- mediated cell cycle arrest. J Virol 2010;84: 5229-5237.
-
(2010)
J Virol
, vol.84
, pp. 5229-5237
-
-
Gottwein, E.1
Cullen, B.R.2
-
68
-
-
84875248780
-
MiR-132 enhances HIV-1 replication
-
Chiang K, Liu H, Rice AP: miR-132 enhances HIV-1 replication. Virology 2013;438: 1-4.
-
(2013)
Virology
, vol.438
, pp. 1-4
-
-
Chiang, K.1
Liu, H.2
Rice, A.P.3
-
69
-
-
84873556662
-
MicroRNA-122 dependent binding of Ago2 protein to Hepatitis C virus RNA is associated with enhanced RNA stability and translation stimulation
-
Conrad KD, Giering F, Erfurth C, Neumann A, Fehr C, Meister G, Niepmann M: microRNA-122 dependent binding of Ago2 protein to Hepatitis C virus RNA is associated with enhanced RNA stability and translation stimulation. PLoS One 2013;8:e56272.
-
(2013)
PLoS One
, vol.8
-
-
Conrad, K.D.1
Giering, F.2
Erfurth, C.3
Neumann, A.4
Fehr, C.5
Meister, G.6
Niepmann, M.7
-
70
-
-
84862161373
-
Characterization of host microRNAs that respond to DNA virus infection in a crustacean
-
Huang T, Xu D, Zhang X: Characterization of host microRNAs that respond to DNA virus infection in a crustacean. BMC Genomics 2012;13,159.
-
(2012)
BMC Genomics
, vol.13
, pp. 159
-
-
Huang, T.1
Xu, D.2
Zhang, X.3
-
71
-
-
77951976180
-
MiR-132 regulates antiviral innate immunity through suppression of the p300 transcriptional co-activator
-
Lagos D, Pollara G, Henderson S, Gratrix F, Fabani M, Milne RS, Gotch F, Boshoff C: miR-132 regulates antiviral innate immunity through suppression of the p300 transcriptional co-activator. Nat Cell Biol 2010;12: 513-519.
-
(2010)
Nat Cell Biol
, vol.12
, pp. 513-519
-
-
Lagos, D.1
Pollara, G.2
Henderson, S.3
Gratrix, F.4
Fabani, M.5
Milne, R.S.6
Gotch, F.7
Boshoff, C.8
-
72
-
-
58049217312
-
MicroRNA-122 stimulates translation of hepatitis C virus RNA
-
Henke JI, Goergen D, Zheng J, Song Y, Schuttler CG, Fehr C, Junemann C, Niepmann M: microRNA-122 stimulates translation of hepatitis C virus RNA. EMBO J 2008;27: 3300-3310.
-
(2008)
EMBO J
, vol.27
, pp. 3300-3310
-
-
Henke, J.I.1
Goergen, D.2
Zheng, J.3
Song, Y.4
Schuttler, C.G.5
Fehr, C.6
Junemann, C.7
Niepmann, M.8
-
73
-
-
49949117302
-
Widespread changes in protein synthesis induced by microRNAs
-
Selbach M, Schwanhäusser B, Thierfelder N, Fang Z, Khanin R, Rajewsky N: Widespread changes in protein synthesis induced by microRNAs. Nature 2008;455: 58-63.
-
(2008)
Nature
, vol.455
, pp. 58-63
-
-
Selbach, M.1
Schwanhäusser, B.2
Thierfelder, N.3
Fang, Z.4
Khanin, R.5
Rajewsky, N.6
-
74
-
-
37049002638
-
MicroRNA-155 regulates the generation of immunoglobulin class-switched plasma cells
-
Vigorito E, Perks KL, Abreu-Goodger C, Bunting S, Xiang Z, Kohlhaas S, Das PP, Miska EA, Rodriguez A, Bradley A, Smith KG, Rada C, Enright AJ, Toellner KM, Maclennan IC, Turner M: MicroRNA-155 regulates the generation of immunoglobulin class-switched plasma cells. Immunity 2007;27: 847-859.
-
(2007)
Immunity
, vol.27
, pp. 847-859
-
-
Vigorito, E.1
Perks, K.L.2
Abreu-Goodger, C.3
Bunting, S.4
Xiang, Z.5
Kohlhaas, S.6
Das, P.P.7
Miska, E.A.8
Rodriguez, A.9
Bradley, A.10
Smith, K.G.11
Rada, C.12
Enright, A.J.13
Toellner, K.M.14
MacLennan, I.C.15
Turner, M.16
-
75
-
-
37049017580
-
MicroRNA-155 function in B cells
-
Calame K: MicroRNA-155 function in B cells. Immunity 2007;27: 825-827.
-
(2007)
Immunity
, vol.27
, pp. 825-827
-
-
Calame, K.1
-
76
-
-
37249092180
-
A viral microRNA functions as an orthologue of cellular miR-155
-
Gottwein E, Mukherjee N, Sachse C, Frenzel C, Majoros WH, Chi JT, Braich R, Manoharan M, Soutschek J, Ohler U, Cullen BR: A viral microRNA functions as an orthologue of cellular miR-155. Nature 2007;450: 1096-1099.
-
(2007)
Nature
, vol.450
, pp. 1096-1099
-
-
Gottwein, E.1
Mukherjee, N.2
Sachse, C.3
Frenzel, C.4
Majoros, W.H.5
Chi, J.T.6
Braich, R.7
Manoharan, M.8
Soutschek, J.9
Ohler, U.10
Cullen, B.R.11
-
77
-
-
79952224195
-
Critical role of the virus-encoded microRNA-155 ortholog in the induction of Marek's disease lymphomas
-
Zhao Y, Xu H, Yao Y, Smith LP, Kgosana L, Green J, Petherbridge L, Baigent SJ, Nair V: Critical role of the virus-encoded microRNA-155 ortholog in the induction of Marek's disease lymphomas. PLoS Pathog 2011;7:e1001305.
-
(2011)
PLoS Pathog
, vol.7
-
-
Zhao, Y.1
Xu, H.2
Yao, Y.3
Smith, L.P.4
Kgosana, L.5
Green, J.6
Petherbridge, L.7
Baigent, S.J.8
Nair, V.9
-
78
-
-
58149396889
-
A functional MicroRNA-155 ortholog encoded by the oncogenic Marek's disease virus
-
Zhao Y, Yao Y, Xu H, Lambeth L, Smith LP, Kgosana L, Wang X, Nair V: A functional MicroRNA-155 ortholog encoded by the oncogenic Marek's disease virus. J Virol 2009; 83: 489-492.
-
(2009)
J Virol
, vol.83
, pp. 489-492
-
-
Zhao, Y.1
Yao, Y.2
Xu, H.3
Lambeth, L.4
Smith, L.P.5
Kgosana, L.6
Wang, X.7
Nair, V.8
-
79
-
-
36349035211
-
Kaposi's sarcoma-associated herpesvirus encodes an ortholog of miR-155
-
Skalsky RL, Samols MA, Plaisance KB, Boss IW, Riva A, Lopez MC, Baker HV, Renne R: Kaposi's sarcoma-associated herpesvirus encodes an ortholog of miR-155. J Virol 2007;81: 12836-12845.
-
(2007)
J Virol
, vol.81
, pp. 12836-12845
-
-
Skalsky, R.L.1
Samols, M.A.2
Plaisance, K.B.3
Boss, I.W.4
Riva, A.5
Lopez, M.C.6
Baker, H.V.7
Renne, R.8
-
80
-
-
0034712014
-
Virus-induced neuronal apoptosis blocked by the herpes simplex virus latency-associated transcript
-
Perng GC, Jones C, Ciacci-Zanella J, Stone M, Henderson G, Yukht A, Slanina SM, Hofman FM, Ghiasi H, Nesburn AB, Wechsler SL: Virus-induced neuronal apoptosis blocked by the herpes simplex virus latency-associated transcript. Science 2000;287: 1500-1503.
-
(2000)
Science
, vol.287
, pp. 1500-1503
-
-
Perng, G.C.1
Jones, C.2
Ciacci-Zanella, J.3
Stone, M.4
Henderson, G.5
Yukht, A.6
Slanina, S.M.7
Hofman, F.M.8
Ghiasi, H.9
Nesburn, A.B.10
Wechsler, S.L.11
-
81
-
-
0034785348
-
TGF-b signaling in tumor suppression and cancer progression
-
Derynck R, Akhurst RJ & Balmain A: TGF-b signaling in tumor suppression and cancer progression. Nature Genet 2001;29: 117-129.
-
(2001)
Nature Genet
, vol.29
, pp. 117-129
-
-
Derynck, R.1
Akhurst, R.J.2
Balmain, A.3
-
82
-
-
0033624137
-
ICP0, a regulator of herpes simplex virus during lytic and latent infection
-
Everett RD: ICP0, a regulator of herpes simplex virus during lytic and latent infection. Bioessays 2000;22;761-770.
-
(2000)
Bioessays
, vol.22
, pp. 761-770
-
-
Everett, R.D.1
-
83
-
-
49649119633
-
MicroRNAs expressed by herpes simplex virus 1 during latent infection regulate viral mRNAs
-
Umbach JL, Kramer MF, Jurak I, Karnowski HW, Coen DM, Cullen BR: MicroRNAs expressed by herpes simplex virus 1 during latent infection regulate viral mRNAs. Nature 2008;454: 780-783.
-
(2008)
Nature
, vol.454
, pp. 780-783
-
-
Umbach, J.L.1
Kramer, M.F.2
Jurak, I.3
Karnowski, H.W.4
Coen, D.M.5
Cullen, B.R.6
-
84
-
-
34548304523
-
HIV-1 TAR element is processed by Dicer to yield a viral micro-RNA involved in chromatin remodeling of the viral LTR
-
Klase Z, Kale P, Winograd R, Gupta MV, Heydarian M, Berro R, McCaffrey T, Kashanchi F: HIV-1 TAR element is processed by Dicer to yield a viral micro-RNA involved in chromatin remodeling of the viral LTR. BMC Mol Biol 2007;8: 63.
-
(2007)
BMC Mol Biol
, vol.8
, pp. 63
-
-
Klase, Z.1
Kale, P.2
Winograd, R.3
Gupta, M.V.4
Heydarian, M.5
Berro, R.6
McCaffrey, T.7
Kashanchi, F.8
-
85
-
-
34547132780
-
Host immune system gene targeting by a viral miRNA
-
Stern-Ginossar N, Elefant N, Zimmermann A, Wolf DG, Saleh N, Biton M, Horwitz E, Prokocimer Z, Prichard M, Hahn G, Goldman-Wohl D, Greenfield C, Yagel S, Hengel H, Altuvia Y, Margalit H, Mandelboim O: Host immune system gene targeting by a viral miRNA. Science 2007;317: 376-381.
-
(2007)
Science
, vol.317
, pp. 376-381
-
-
Stern-Ginossar, N.1
Elefant, N.2
Zimmermann, A.3
Wolf, D.G.4
Saleh, N.5
Biton, M.6
Horwitz, E.7
Prokocimer, Z.8
Prichard, M.9
Hahn, G.10
Goldman-Wohl, D.11
Greenfield, C.12
Yagel, S.13
Hengel, H.14
Altuvia, Y.15
Margalit, H.16
Mandelboim, O.17
-
86
-
-
33646693646
-
The human polyomaviruses
-
Eash S, Manley K, Gasparovic M, Querbes W, Atwood WJ: The human polyomaviruses. Cell Mol Life Sci 2006;63: 865-876.
-
(2006)
Cell Mol Life Sci
, vol.63
, pp. 865-876
-
-
Eash, S.1
Manley, K.2
Gasparovic, M.3
Querbes, W.4
Atwood, W.J.5
-
87
-
-
79951603090
-
An identical miRNA of the human JC and BK polyoma viruses targets the stress-induced ligand ULBP3 to escape immune elimination
-
Bauman Y, Nachmani D, Vitenshtein A, Tsukerman P, Drayman N, Stern-Ginossar N, Lankry D, Gruda R, Mandelboim O: An identical miRNA of the human JC and BK polyoma viruses targets the stress-induced ligand ULBP3 to escape immune elimination. Cell Host Microbe 2011;9: 93-102.
-
(2011)
Cell Host Microbe
, vol.9
, pp. 93-102
-
-
Bauman, Y.1
Nachmani, D.2
Vitenshtein, A.3
Tsukerman, P.4
Drayman, N.5
Stern-Ginossar, N.6
Lankry, D.7
Gruda, R.8
Mandelboim, O.9
-
88
-
-
80053208713
-
MiR-122 activates hepatitis C virus translation by a specialized mechanism requiring particular RNA components
-
Roberts AP, Lewis AP, Jopling CL: miR-122 activates hepatitis C virus translation by a specialized mechanism requiring particular RNA components. Nucleic Acids Res 2011;39: 7716-7729.
-
(2011)
Nucleic Acids Res
, vol.39
, pp. 7716-7729
-
-
Roberts, A.P.1
Lewis, A.P.2
Jopling, C.L.3
-
89
-
-
78049489278
-
Virally induced cellular microRNA miR-155 plays a key role in B-cell immortalization by Epstein-Barr virus
-
Linnstaedt SD, Gottwein E, Skalsky RL, Luftig MA and Cullen BR: Virally induced cellular microRNA miR-155 plays a key role in B-cell immortalization by Epstein-Barr virus. J Virol 2010; 84: 11670-11678.
-
(2010)
J Virol
, vol.84
, pp. 11670-11678
-
-
Linnstaedt, S.D.1
Gottwein, E.2
Skalsky, R.L.3
Luftig, M.A.4
Cullen, B.R.5
-
90
-
-
55249124589
-
Epstein-Barr virus-induced miR-155 attenuates NF-kappaB signaling and stabilizes latent virus persistence
-
Lu F, Weidmer A, Liu CG, Volinia S, Croce CM, Lieberman PM: Epstein-Barr virus-induced miR-155 attenuates NF-kappaB signaling and stabilizes latent virus persistence. J Virol 2008;82: 10436-10443.
-
(2008)
J Virol
, vol.82
, pp. 10436-10443
-
-
Lu, F.1
Weidmer, A.2
Liu, C.G.3
Volinia, S.4
Croce, C.M.5
Lieberman, P.M.6
-
91
-
-
64249144494
-
A microRNA imparts robustness against environmental fluctuation during development
-
Li X, Cassidy JJ, Reinke CA, Fischboeck S, Carthew RW: A microRNA imparts robustness against environmental fluctuation during development. Cell 2009;137: 273-282.
-
(2009)
Cell
, vol.137
, pp. 273-282
-
-
Li, X.1
Cassidy, J.J.2
Reinke, C.A.3
Fischboeck, S.4
Carthew, R.W.5
-
92
-
-
84886090197
-
MicroRNAs in liver disease: From diagnostics to therapeutics
-
doi: 10.1016/j.clinbiochem.2013.01.025. [Epub ahead of print]
-
Takahashi K, Yan I, Wen HJ, Patel T: microRNAs in liver disease: From diagnostics to therapeutics. Clin Biochem 2013;2. doi: 10.1016/j.clinbiochem. 2013.01.025. [Epub ahead of print]
-
(2013)
Clin Biochem
, pp. 2
-
-
Takahashi, K.1
Yan, I.2
Wen, H.J.3
Patel, T.4
-
93
-
-
84868302860
-
MiRNA-101: A potential target for tumor therapy
-
Gui T, Shen K: miRNA-101: a potential target for tumor therapy. Cancer Epidemiol 2012;36: 537-540.
-
(2012)
Cancer Epidemiol
, vol.36
, pp. 537-540
-
-
Gui, T.1
Shen, K.2
-
94
-
-
51049109002
-
Harnessing endogenous miRNAs to control virus tissue tropism as a strategy for developing attenuated virus vaccines
-
Barnes D, Kunitomi M, Vignuzzi M, Saksela K, Andino R. Harnessing endogenous miRNAs to control virus tissue tropism as a strategy for developing attenuated virus vaccines. Cell Host Microbe 2008;4: 239-248.
-
(2008)
Cell Host Microbe
, vol.4
, pp. 239-248
-
-
Barnes, D.1
Kunitomi, M.2
Vignuzzi, M.3
Saksela, K.4
Andino, R.5
-
95
-
-
55549100223
-
Engineering microRNA responsiveness to decrease virus pathogenicity
-
Kelly EJ, Hadac EM, Greiner S, Russell SJ: Engineering microRNA responsiveness to decrease virus pathogenicity. Nat Med 2008;14: 1278-1283
-
(2008)
Nat Med
, vol.14
, pp. 1278-1283
-
-
Kelly, E.J.1
Hadac, E.M.2
Greiner, S.3
Russell, S.J.4
|