메뉴 건너뛰기




Volumn 16, Issue 1, 2010, Pages 170-185

Mature and functional viral miRNAs transcribed from novel RNA polymerase III promoters

Author keywords

Herpesvirus; MicroRNA; Noncoding RNA; Reverse ligation mediated reverse transcription polymerase chain reaction; RNA polymerase III

Indexed keywords

HERPESVIRUS ENTRY MEDIATOR; MICRORNA; RNA POLYMERASE; VIRUS RNA; DNA DIRECTED RNA POLYMERASE III;

EID: 75649119703     PISSN: 13558382     EISSN: 14699001     Source Type: Journal    
DOI: 10.1261/rna.1873910     Document Type: Article
Times cited : (72)

References (55)
  • 1
    • 28044471565 scopus 로고    scopus 로고
    • MicroRNA functions in animal development and human disease
    • DOI 10.1242/dev.02073
    • Alvarez-Garcia I, Miska EA. 2005. MicroRNA functions in animal development and human disease. Development 132: 4653-4662. (Pubitemid 41685276)
    • (2005) Development , vol.132 , Issue.21 , pp. 4653-4662
    • Alvarez-Garcia, I.1    Miska, E.A.2
  • 3
    • 0347444723 scopus 로고    scopus 로고
    • MicroRNAs: Genomics, biogenesis, mechanism, and function
    • Bartel DP. 2004. MicroRNAs: Genomics, biogenesis, mechanism, and function. Cell 116: 281-297.
    • (2004) Cell , vol.116 , pp. 281-297
    • Bartel, D.P.1
  • 4
    • 0019266011 scopus 로고
    • Isolation of five strains of herpesviruses from two species of free living small rodents
    • Blaskovic D, Stanceková M, Svobodová J, Mistríková J. 1980. Isolation of five strains of herpesviruses from two species of free living small rodents. Acta Virol 24: 468.
    • (1980) Acta Virol , vol.24 , pp. 468
    • Blaskovic, D.1    Stanceková, M.2    Svobodová, J.3    Mistríková, J.4
  • 6
    • 0030808292 scopus 로고    scopus 로고
    • Murine gammaherpesvirus 68 encodes tRNA-like sequences which are expressed during latency
    • Bowden RJ, Simas JP, Davis AJ, Efstathiou S. 1997. Murine gamma-herpesvirus 68 encodes tRNA-like sequences which are expressed during latency. J Gen Virol 78: 1675-1687. (Pubitemid 27343108)
    • (1997) Journal of General Virology , vol.78 , Issue.7 , pp. 1675-1687
    • Bowden, R.J.1    Simas, J.P.2    Davis, A.J.3    Efstathiou, S.4
  • 7
    • 33144466305 scopus 로고    scopus 로고
    • Transcriptional origin of Kaposi's sarcoma-associated herpesvirus microRNAs
    • DOI 10.1128/JVI.80.5.2234-2242.2006
    • Cai X, Cullen BR. 2006. Transcriptional origin of Kaposi's sarcoma-associated herpesvirus microRNAs. J Virol 80: 2234-2242. (Pubitemid 43271530)
    • (2006) Journal of Virology , vol.80 , Issue.5 , pp. 2234-2242
    • Cai, X.1    Cullen, B.R.2
  • 10
    • 60149088848 scopus 로고    scopus 로고
    • Origins and mechanisms of miRNAs and siRNAs
    • Carthew RW, Sontheimer EJ. 2009. Origins and mechanisms of miRNAs and siRNAs. Cell 136: 642-655.
    • (2009) Cell , vol.136 , pp. 642-655
    • Carthew, R.W.1    Sontheimer, E.J.2
  • 11
    • 0036281954 scopus 로고    scopus 로고
    • Characterization of a spontaneous 9.5-kilobase-deletion mutant of murine gamma-herpesvirus 68 reveals tissue-specific genetic requirements for latency
    • Clambey ET, Virgin HW, Speck SH. 2002. Characterization of a spontaneous 9.5-kilobase-deletion mutant of murine gamma-herpesvirus 68 reveals tissue-specific genetic requirements for latency. J Virol 76: 6532-6544.
    • (2002) J Virol , vol.76 , pp. 6532-6544
    • Clambey, E.T.1    Virgin, H.W.2    Speck, S.H.3
  • 12
    • 58749095112 scopus 로고    scopus 로고
    • Viral and cellular messenger RNA targets of viral microRNAs
    • Cullen BR. 2009. Viral and cellular messenger RNA targets of viral microRNAs. Nature 457: 421-425.
    • (2009) Nature , vol.457 , pp. 421-425
    • Cullen, B.R.1
  • 13
    • 2942672641 scopus 로고    scopus 로고
    • Identification of a region of the virus genome involved in murine gammaherpesvirus 68-induced splenic pathology
    • DOI 10.1099/vir.0.79908-0
    • Dutia BM, Roy DJ, Ebrahimi B, Gangadharan B, Efstathiou S, Stewart JP, Nash AA. 2004. Identification of a region of the virus genome involved in murine gammaherpesvirus 68-induced splenic pathology. J Gen Virol 85: 1393-1400. (Pubitemid 38807735)
    • (2004) Journal of General Virology , vol.85 , Issue.6 , pp. 1393-1400
    • Dutia, B.M.1    Roy, D.J.2    Ebrahimi, B.3    Gangadharan, B.4    Efstathiou, S.5    Stewart, J.P.6    Nash, A.A.7
  • 15
    • 0035863097 scopus 로고    scopus 로고
    • RNA interference is mediated by 21- And 22-nucleotide RNAs
    • DOI 10.1101/gad.862301
    • Elbashir SM, Lendeckel W, Tuschl T. 2001. RNA interference is mediated by 21- and 22-nucleotide RNAs. Genes & Dev 15: 188-200. (Pubitemid 32107664)
    • (2001) Genes and Development , vol.15 , Issue.2 , pp. 188-200
    • Elbashir, S.M.1    Lendeckel, W.2    Tuschl, T.3
  • 17
    • 0037131972 scopus 로고    scopus 로고
    • Gamma-Herpesvirus latency is preferentially maintained in splenic germinal center and memory B cells
    • DOI 10.1084/jem.20020890
    • Flaño E, Kim I, Woodland DL, Blackman MA. 2002. Gamma-herpesvirus latency is preferentially maintained in splenic germinal center and memory B cells. J Exp Med 196: 1363-1372. (Pubitemid 35375555)
    • (2002) Journal of Experimental Medicine , vol.196 , Issue.10 , pp. 1363-1372
    • Flano, E.1    Kim, I.-J.2    Woodland, D.L.3    Blackman, M.A.4
  • 18
    • 44649110160 scopus 로고    scopus 로고
    • Viral and Cellular MicroRNAs as Determinants of Viral Pathogenesis and Immunity
    • DOI 10.1016/j.chom.2008.05.002, PII S1931312808001509
    • Gottwein E, Cullen BR. 2008. Viral and cellular microRNAs as determinants of viral pathogenesis and immunity. Cell Host Microbe 3: 375-387. (Pubitemid 351773098)
    • (2008) Cell Host and Microbe , vol.3 , Issue.6 , pp. 375-387
    • Gottwein, E.1    Cullen, B.R.2
  • 19
    • 33144466305 scopus 로고    scopus 로고
    • Transcriptional origin of Kaposi's sarcoma-associated herpesvirus microRNAs
    • DOI 10.1128/JVI.80.5.2234-2242.2006
    • Gottwein E, Cai X, Cullen BR. 2006. Expression and function of microRNAs encoded by Kaposi's sarcoma-associated herpesvirus. Cold Spring Harb Symp Quant Biol 71: 357-364. (Pubitemid 43271530)
    • (2006) Journal of Virology , vol.80 , Issue.5 , pp. 2234-2242
    • Cai, X.1    Cullen, B.R.2
  • 20
    • 55049086337 scopus 로고    scopus 로고
    • The roles of microRNAs in mammalian virus infection
    • Grassmann R, Jeang K. 2008. The roles of microRNAs in mammalian virus infection. Biochim Biophys Acta 1779: 706-711.
    • (2008) Biochim Biophys Acta , vol.1779 , pp. 706-711
    • Grassmann, R.1    Jeang, K.2
  • 21
    • 18144365478 scopus 로고    scopus 로고
    • MicroRNA biogenesis and cancer
    • Gregory RI, Shiekhattar R. 2005. MicroRNA biogenesis and cancer. Cancer Res 65: 3509-3512.
    • (2005) Cancer Res , vol.65 , pp. 3509-3512
    • Gregory, R.I.1    Shiekhattar, R.2
  • 22
    • 0034813205 scopus 로고    scopus 로고
    • Widespread use of TATA elements in the core promoters for RNA polymerases III, II, and I in fission yeast
    • DOI 10.1128/MCB.21.20.6870-6881.2001
    • Hamada M, Huang Y, Lowe TM, Maraia RJ. 2001. Widespread use of TATA elements in the core promoters for RNA polymerases III, II, and I in fission yeast. Mol Cell Biol 21: 6870-6881. (Pubitemid 32911248)
    • (2001) Molecular and Cellular Biology , vol.21 , Issue.20 , pp. 6870-6881
    • Hamada, M.1    Huang, Y.2    Lowe, T.M.3    Maraia, R.J.4
  • 23
    • 34447647842 scopus 로고    scopus 로고
    • Useful 'junk': Alu RNAs in the human transcriptome
    • Häsler J, Samuelsson T, Strub K. 2007. Useful 'junk': Alu RNAs in the human transcriptome. Cell Mol Life Sci 64: 1793-1800.
    • (2007) Cell Mol Life Sci , vol.64 , pp. 1793-1800
    • Häsler, J.1    Samuelsson, T.2    Strub, K.3
  • 25
    • 0035800521 scopus 로고    scopus 로고
    • A cellular function for the RNA-interference enzyme dicer in the maturation of the let-7 small temporal RNA
    • DOI 10.1126/science.1062961
    • Hutvágner G, McLachlan J, Pasquinelli AE, Bálint E, Tuschl T, Zamore PD. 2001. A cellular function for the RNA-interference enzyme Dicer in the maturation of the let-7 small temporal RNA. Science 293: 834-838. (Pubitemid 32743968)
    • (2001) Science , vol.293 , Issue.5531 , pp. 834-838
    • Hutvagner, G.1    McLachlan, J.2    Pasquinelli, A.E.3    Balint, E.4    Tuschl, T.5    Zamore, P.D.6
  • 26
    • 0142165224 scopus 로고    scopus 로고
    • Functional siRNAs and miRNAs exhibit strand bias
    • DOI 10.1016/S0092-8674(03)00801-8
    • Khvorova A, Reynolds A, Jayasena SD. 2003. Functional siRNAs and miRNAs exhibit strand bias. Cell 115: 209-216. (Pubitemid 37329584)
    • (2003) Cell , vol.115 , Issue.2 , pp. 209-216
    • Khvorova, A.1    Reynolds, A.2    Jayasena, S.D.3
  • 27
    • 18344369543 scopus 로고    scopus 로고
    • MicroRNA biogenesis: Coordinated cropping and dicing
    • Kim VN. 2005. MicroRNA biogenesis: Coordinated cropping and dicing. Nat Rev Mol Cell Biol 6: 376-385.
    • (2005) Nat Rev Mol Cell Biol , vol.6 , pp. 376-385
    • Kim, V.N.1
  • 29
    • 84984765629 scopus 로고    scopus 로고
    • Strategies to determine the biological function of microRNAs
    • DOI 10.1038/ng1799, PII N1799
    • Krützfeldt J, Poy MN, Stoffel M. 2006. Strategies to determine the biological function of microRNAs. Nat Genet 38 (Suppl): S14-S19. (Pubitemid 43920938)
    • (2006) Nature Genetics , vol.38 , Issue.SUPPL. 1
    • Krutzfeldt, J.1    Poy, M.N.2    Stoffel, M.3
  • 32
    • 8144225486 scopus 로고    scopus 로고
    • MicroRNA genes are transcribed by RNA polymerase II
    • DOI 10.1038/sj.emboj.7600385
    • Lee Y, Kim M, Han J, Yeom K, Lee S, Baek SH, Kim VN. 2004. MicroRNA genes are transcribed by RNA polymerase II. EMBO J 23: 4051-4060. (Pubitemid 39472426)
    • (2004) EMBO Journal , vol.23 , Issue.20 , pp. 4051-4060
    • Lee, Y.1    Kim, M.2    Han, J.3    Yeom, K.-H.4    Lee, S.5    Baek, S.H.6    Kim, V.N.7
  • 33
    • 8644247492 scopus 로고    scopus 로고
    • Adenovirus VA1 noncoding RNA can inhibit small interfering RNA and microRNA biogenesis
    • DOI 10.1128/JVI.78.23.12868-12876.2004
    • Lu S, Cullen BR. 2004. Adenovirus VA1 noncoding RNA can inhibit small interfering RNA and microRNA biogenesis. J Virol 78: 12868-12876. (Pubitemid 39507795)
    • (2004) Journal of Virology , vol.78 , Issue.23 , pp. 12868-12876
    • Lu, S.1    Cullen, B.R.2
  • 34
    • 29144431656 scopus 로고    scopus 로고
    • A human, ATP-independent, RISC assembly machine fueled by pre-miRNA
    • DOI 10.1101/gad.1384005
    • Maniataki E, Mourelatos Z. 2005. A human, ATP-independent, RISC assembly machine fueled by pre-miRNA. Genes & Dev 19: 2979-2990. (Pubitemid 41798114)
    • (2005) Genes and Development , vol.19 , Issue.24 , pp. 2979-2990
    • Maniataki, E.1    Mourelatos, Z.2
  • 35
    • 0025931571 scopus 로고
    • Adenovirus virus-associated RNA and translation control
    • Mathews MB, Shenk T. 1991. Adenovirus virus-associated RNA and translation control. J Virol 65: 5657-5662.
    • (1991) J Virol , vol.65 , pp. 5657-5662
    • Mathews, M.B.1    Shenk, T.2
  • 37
    • 0346727383 scopus 로고    scopus 로고
    • High Expression of Precursor MicroRNA-155/BIC RNA in Children with Burkitt Lymphoma
    • DOI 10.1002/gcc.10316
    • Metzler M, Wilda M, Busch K, Viehmann S, Borkhardt A. 2004. High expression of precursor microRNA-155/BIC RNA in children with Burkitt lymphoma. Genes Chromosomes Cancer 39: 167-169. (Pubitemid 38056091)
    • (2004) Genes Chromosomes and Cancer , vol.39 , Issue.2 , pp. 167-169
    • Metzler, M.1    Wilda, M.2    Busch, K.3    Viehmann, S.4    Borkhardt, A.5
  • 38
    • 0034652838 scopus 로고    scopus 로고
    • Survey and summary: Transcription by RNA polymerases I and III
    • Paule M, White R. 2000. Survey and summary: Transcription by RNA polymerases I and III. Nucleic Acids Res 28: 1283-1298.
    • (2000) Nucleic Acids Res , vol.28 , pp. 1283-1298
    • Paule, M.1    White, R.2
  • 41
    • 62749097257 scopus 로고    scopus 로고
    • The microRNAs of Epstein-Barr virus are expressed at dramatically differing levels among cell lines
    • Pratt ZL, Kuzembayeva M, Sengupta S, Sugden B. 2009. The microRNAs of Epstein-Barr virus are expressed at dramatically differing levels among cell lines. Virology 386: 387-397.
    • (2009) Virology , vol.386 , pp. 387-397
    • Pratt, Z.L.1    Kuzembayeva, M.2    Sengupta, S.3    Sugden, B.4
  • 42
    • 0020971301 scopus 로고
    • Joining of RNA molecules with RNA ligase
    • Romaniuk P, Uhlenbeck O. 1983. Joining of RNA molecules with RNA ligase. Methods Enzymol 100: 52-59.
    • (1983) Methods Enzymol , vol.100 , pp. 52-59
    • Romaniuk, P.1    Uhlenbeck, O.2
  • 43
    • 33344465450 scopus 로고    scopus 로고
    • Sequence-specific interference by small RNAs derived from adenovirus VAI RNA
    • DOI 10.1016/j.febslet.2006.01.085, PII S0014579306001554
    • Sano M, Kato Y, Taira K. 2006. Sequence-specific interference by small RNAs derived from adenovirus VAI RNA. FEBS Lett 580: 1553-1564. (Pubitemid 43290350)
    • (2006) FEBS Letters , vol.580 , Issue.6 , pp. 1553-1564
    • Sano, M.1    Kato, Y.2    Taira, K.3
  • 44
    • 34250357616 scopus 로고    scopus 로고
    • Optimization and characterization of tRNA-shRNA expression constructs
    • DOI 10.1093/nar/gkm103
    • Scherer LJ, Frank R, Rossi JJ. 2007. Optimization and characterization of tRNA-shRNA expression constructs. Nucleic Acids Res 35: 2620-2628. (Pubitemid 47073675)
    • (2007) Nucleic Acids Research , vol.35 , Issue.8 , pp. 2620-2628
    • Scherer, L.J.1    Frank, R.2    Rossi, J.J.3
  • 45
    • 0037108150 scopus 로고    scopus 로고
    • Recruitment of RNA polymerase III to its target promoters
    • Schramm L, Hernandez N. 2002. Recruitment of RNA polymerase III to its target promoters. Genes & Dev 16: 2593-2620.
    • (2002) Genes & Dev , vol.16 , pp. 2593-2620
    • Schramm, L.1    Hernandez, N.2
  • 46
    • 0032126387 scopus 로고    scopus 로고
    • Murine gammaherpesvirus 68: A model for the study of gammaherpesvirus pathogenesis
    • DOI 10.1016/S0966-842X(98)01306-7, PII S0966842X98013067
    • Simas J, Efstathiou S. 1998. Murine gammaherpesvirus 68: A model for the study of gammaherpesvirus pathogenesis. Trends Microbiol 6: 276-282. (Pubitemid 28343308)
    • (1998) Trends in Microbiology , vol.6 , Issue.7 , pp. 276-282
    • Pedro Simas, J.1    Efstathiou, S.2
  • 47
    • 0032892928 scopus 로고    scopus 로고
    • Analysis of murine gammaherpesvirus-68 transcription during lytic and latent infection
    • Simas J, Swann D, Bowden R, Efstathiou S. 1999. Analysis of murine gammaherpesvirus-68 transcription during lytic and latent infection. J Gen Virol 80: 75-82. (Pubitemid 29041683)
    • (1999) Journal of General Virology , vol.80 , Issue.1 , pp. 75-82
    • Simas, J.P.1    Swann, D.2    Bowden, R.3    Efstathiou, S.4
  • 48
    • 0033179090 scopus 로고    scopus 로고
    • Host and viral genetics of chronic infection: A mouse model of gamma- Herpesvirus pathogenesis
    • DOI 10.1016/S1369-5274(99)80071-X
    • Speck S, Virgin H. 1999. Host and viral genetics of chronic infection: A mouse model of gamma-herpesvirus pathogenesis. Curr Opin Microbiol 2: 403-409. (Pubitemid 29366963)
    • (1999) Current Opinion in Microbiology , vol.2 , Issue.4 , pp. 403-409
    • Speck, S.H.1    Virgin IV, H.W.2
  • 49
    • 46049121347 scopus 로고    scopus 로고
    • Noncoding RNAs produced by oncogenic human herpesviruses
    • DOI 10.1002/jcp.21480
    • Swaminathan S. 2008. Noncoding RNAs produced by oncogenic human herpesviruses. J Cell Physiol 216: 321-326. (Pubitemid 351898457)
    • (2008) Journal of Cellular Physiology , vol.216 , Issue.2 , pp. 321-326
    • Swaminathan, S.1
  • 50
    • 0029813372 scopus 로고    scopus 로고
    • Characterization of tumor cell lines derived from murine gammaherpesvirus-68-infected mice
    • Usherwood E, Stewart J, Nash A. 1996. Characterization of tumor cell lines derived from murine gammaherpesvirus-68-infected mice. J Virol 70: 6516-6518. (Pubitemid 26266884)
    • (1996) Journal of Virology , vol.70 , Issue.9 , pp. 6516-6518
    • Usherwood, E.J.1    Stewart, J.P.2    Nash, A.A.3
  • 52
    • 0038784895 scopus 로고    scopus 로고
    • Long-term latent murine gammaherpesvirus 68 infection is preferentially found within the surface immunoglobulin D-negative subset of splenic B cells in vivo
    • Willer DO, Speck SH. 2003. Long-term latent murine gammaherpesvirus 68 infection is preferentially found within the surface immunoglobulin D-negative subset of splenic B cells in vivo. J Virol 77: 8310-8321.
    • (2003) J Virol , vol.77 , pp. 8310-8321
    • Willer, D.O.1    Speck, S.H.2
  • 53
    • 61849137222 scopus 로고    scopus 로고
    • Many roads to maturity: MicroRNA biogenesis pathways and their regulation
    • Winter J, Jung S, Keller S, Gregory RI, Diederichs S. 2009. Many roads to maturity: MicroRNA biogenesis pathways and their regulation. Nat Cell Biol 11: 228-234.
    • (2009) Nat Cell Biol , vol.11 , pp. 228-234
    • Winter, J.1    Jung, S.2    Keller, S.3    Gregory, R.I.4    Diederichs, S.5
  • 54
    • 0347361541 scopus 로고    scopus 로고
    • Exportin-5 mediates the nuclear export of pre-microRNAs and short hairpin RNAs
    • DOI 10.1101/gad.1158803
    • Yi R, Qin Y, Macara I, Cullen B. 2003. Exportin-5 mediates the nuclear export of pre-microRNAs and short hairpin RNAs. Genes & Dev 17: 3011-3016. (Pubitemid 38040764)
    • (2003) Genes and Development , vol.17 , Issue.24 , pp. 3011-3016
    • Yi, R.1    Qin, Y.2    Macara, I.G.3    Cullen, B.R.4
  • 55
    • 33749070342 scopus 로고    scopus 로고
    • Recognition and cleavage of primary microRNA transcripts
    • Zeng Y, Cullen B. 2006. Recognition and cleavage of primary microRNA transcripts. Methods Mol Biol 342: 49-56.
    • (2006) Methods Mol Biol , vol.342 , pp. 49-56
    • Zeng, Y.1    Cullen, B.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.