-
1
-
-
70349312354
-
ChIP-seq: Advantages and challenges of a maturing technology
-
Park PJ (2009) ChIP-seq: advantages and challenges of a maturing technology. Nature Rev Genet (10):669-680
-
(2009)
Nature Rev Genet
, Issue.10
, pp. 669-680
-
-
Park, P.J.1
-
3
-
-
68949213578
-
Insights from genomic profiling of transcription factors
-
Farnham PJ (2009) Insights from genomic profiling of transcription factors. Nature Rev Genet (10):605-616
-
(2009)
Nature Rev Genet
, Issue.10
, pp. 605-616
-
-
Farnham, P.J.1
-
4
-
-
34250305146
-
Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project
-
Birney E, Stamatoyannopoulos JA, Dutta A, Guigo R, Gingeras TR, Margulies EH et al. (2007) Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project. Nature 447 (7146):799-816
-
(2007)
Nature
, vol.447
, Issue.7146
, pp. 799-816
-
-
Birney, E.1
Stamatoyannopoulos, J.A.2
Dutta, A.3
Guigo, R.4
Gingeras, T.R.5
Margulies, E.H.6
-
5
-
-
62549128139
-
A census of human transcription factors: Function, expression and evolution
-
Vaquerizas JM, Kummerfeld SK, Teichmann SA, Luscombe NM (2009) A census of human transcription factors: function, expression and evolution. Nat Reviews Genetics 10 (4): 252-263
-
(2009)
Nat Reviews Genetics
, vol.10
, Issue.4
, pp. 2
-
-
Vaquerizas, J.M.1
Kummerfeld, S.K.2
Teichmann, S.A.3
Luscombe, N.M.4
-
6
-
-
0022622235
-
Separation of DNA binding from the transcription-activating function of a eukaryotic regulatory protein
-
Keegan L, Gill G, Ptashne M (1986) Separation of DNA binding from the transcription-activating function of a eukaryotic regulatory protein. Science 231 (4739):699-704
-
(1986)
Science
, vol.231
, Issue.4739
, pp. 699-704
-
-
Keegan, L.1
Gill, G.2
Ptashne, M.3
-
7
-
-
0023742799
-
GAL4 derivatives function alone and synergistically with mammalian activators in vitro
-
Lin YS, Carey MF, Ptashne M, Green MR (1988) GAL4 derivatives function alone and synergistically with mammalian activators in vitro. Cell 54 (5):659-664
-
(1988)
Cell
, vol.54
, Issue.5
, pp. 659-664
-
-
Lin, Y.S.1
Carey, M.F.2
Ptashne, M.3
Green, M.R.4
-
8
-
-
0022328481
-
A eukaryotic transcriptional activator bearing the DNA specificity of a prokaryotic repressor
-
Brent R, Ptashne M (1985) A eukaryotic transcriptional activator bearing the DNA specificity of a prokaryotic repressor. Cell 43 (3 Pt 2):729-736
-
(1985)
Cell
, vol.43
, Issue.3
, pp. 729-736
-
-
Brent, R.1
Ptashne, M.2
-
9
-
-
70349329405
-
Many paths to one goal? The proteins that recognize methylated DNA in eukaryotes
-
Sasai N, Defossez PA (2009) Many paths to one goal? The proteins that recognize methylated DNA in eukaryotes. Int J Dev Biol 53 (2-3):323-334
-
(2009)
Int J Dev Biol
, vol.53
, Issue.2-3
, pp. 323-334
-
-
Sasai, N.1
Defossez, P.A.2
-
10
-
-
0031837109
-
Methylated DNA and MeCP2 recruit histone deacetylases to repress transcription
-
Jones PL, Veenstra GJ, Wade PA, Vermaak D, Kass SU, Landsberger N et al. (1998) Methylated DNA and MeCP2 recruit histone deacetylases to repress transcription. Nat Genet 19:187-191
-
(1998)
Nat Genet
, vol.1
, pp. 187-191
-
-
Jones, P.L.1
Veenstra, G.J.2
Vermaak, P.A.3
Kass, D.S.4
Landsberger, N.5
-
11
-
-
0032574977
-
Transcriptional repression by the methyl-CpG-binding protein MeCP2 involves a histone deacetylase complex
-
Nan X, Ng HH, Johnson CA, Laherty CD, Turner BM, Eisenman RN et al. (1998) Transcriptional repression by the methyl-CpG-binding protein MeCP2 involves a histone deacetylase complex. Nature 393 (6683):386-389
-
(1998)
Nature
, vol.393
, Issue.6683
, pp. 386-389
-
-
Nan, X.1
Ng, H.H.2
Johnson, C.A.3
Laherty, C.D.4
Turner, B.M.5
Eisenman, R.N.6
-
12
-
-
0037310947
-
The Tudor domain 'Royal Family': Tudor, plant Agenet, Chromo, PWWP and MBT domains
-
Maurer-Stroh S, Dickens NJ, Hughes-Davies L, Kouzarides T, Eisenhaber F, Ponting CP (2003) The Tudor domain 'Royal Family': Tudor, plant Agenet, Chromo, PWWP and MBT domains. Trends Biochem Sci 28 (2):69-74
-
(2003)
Trends Biochem Sci
, vol.28
, Issue.2
, pp. 69-74
-
-
Maurer-Stroh, S.1
Dickens, N.J.2
Hughes-Davies, L.3
Kouzarides, T.4
Eisenhaber, F.5
Ponting, C.P.6
-
13
-
-
33846019277
-
Methylation of lysine 4 on histone H3: Intricacy of writing and reading a single epigenetic mark
-
Ruthenburg AJ, Allis CD, Wysocka J (2007) Methylation of lysine 4 on histone H3: intricacy of writing and reading a single epigenetic mark. Mol Cell 25 (1):15-30
-
(2007)
Mol Cell
, vol.25
, Issue.1
, pp. 15-30
-
-
Ruthenburg, A.1
Allis, A.2
Wysocka, J.3
-
14
-
-
35848961668
-
How chromatin-binding modules interpret histone modifications: Lessons from professional pocket pickers
-
Taverna SD, Li H, Ruthenburg AJ, Allis CD, Patel DJ (2007) How chromatin-binding modules interpret histone modifications: lessons from professional pocket pickers. Nat Struct Mol Biol 14 (11):1025-1040
-
(2007)
Nat Structmol Biol
, vol.14
, Issue.11
, pp. 1025-1040
-
-
Taverna, S.D.1
Li, H.2
Ruthenburg, A.J.3
Allis, C.D.4
Patel, D.J.5
-
15
-
-
0035282458
-
Selective recognition of methylated lysine 9 on histone H3 by the HP1 chromo domain
-
Bannister AJ, Zegerman P, Partridge JF, Miska EA, Thomas JO, Allshire RC et al. (2001) Selective recognition of methylated lysine 9 on histone H3 by the HP1 chromo domain. Nature 410 (6824):120-124
-
(2001)
Nature
, vol.410
, Issue.6824
, pp. 120-124
-
-
Bannister, A.J.1
Zegerman, P.2
Partridge, J.F.3
Miska, E.A.4
Thomas, J.O.5
Allshire, R.C.6
-
16
-
-
0035282573
-
Methylation of histone H3 lysine 9 creates abinding site for HP1 proteins
-
Lachner M, O'Carroll D, Rea S, Mechtler K, Jenuwein T (2001) Methylation of histone H3 lysine 9 creates abinding site for HP1 proteins. Nature410 (6824):116-120
-
(2001)
Nature
, vol.410
, Issue.6824
, pp. 116-120
-
-
Lachner, M.D.1
O'carroll, M.D.2
Rea, S.3
Mechtler, K.4
Jenuwein, T.5
-
17
-
-
33845666681
-
Structural basis for the methylation state-specific recognition of histone H4-K20 by 53BP1 andCrb2 in DNA repair
-
Botuyan MV, Lee J, Ward IM, Kim JE, Thompson JR, Chen J et al. (2006) Structural basis for the methylation state-specific recognition of histone H4-K20 by 53BP1 andCrb2 in DNA repair. Cell 127 (7):1361-1373
-
(2006)
Cell
, vol.127
, Issue.7
, pp. 1361-1373
-
-
Botuyan, M.V.1
Lee, J.2
Ward, I.M.3
Kim, J.E.4
Thompson, J.R.5
Chen, J.6
-
18
-
-
33645502395
-
Tudor, MBT and chromo domains gauge the degree of lysine methylation
-
Kim J, Daniel J, Espejo A, Lake A, Krishna M, Xia L et al. (2006) Tudor, MBT and chromo domains gauge the degree of lysine methylation. EMBO Rep 7 (4):397-403
-
(2006)
EMBO Rep
, vol.7
, Issue.4
, pp. 397-403
-
-
Kim, J.1
Daniel, J.2
Espejo, A.3
Lake, A.4
Krishna, M.5
Xia, L.6
-
19
-
-
34547858913
-
Structure and acetyl-lysine recognition of the bromodomain
-
Mujtaba S, Zeng L, Zhou MM (2007) Structure and acetyl-lysine recognition of the bromodomain. Oncogene 26 (37):5521-5527
-
(2007)
Oncogene
, vol.26
, Issue.37
, pp. 5521-5527
-
-
Mujtaba, S.1
Zeng, L.2
Zhou, M.M.3
-
20
-
-
67650921949
-
Many human large intergenic noncoding RNAs associate with chromatin-modifying complexes and affect gene expression
-
Khalil AM, Guttman M, Huarte M, Garber M, Raj A, Rivea Morales D et al. (2009) Many human large intergenic noncoding RNAs associate with chromatin-modifying complexes and affect gene expression. Proc Natl Acad Sci U S A 106 (28):11667-11672
-
(2009)
Proc Natl Acad Sci U S A
, vol.106
, Issue.28
, pp. 11667-11672
-
-
Khalil, A.M.1
Guttman, M.2
Huarte, M.3
Garber, M.4
Raj, A.5
Rivea Morales, D.6
-
21
-
-
78650081714
-
ZNF274 recruits the histone methyltransferase SETDB1 to the 3' ends of ZNF genes
-
Frietze S, O'Geen H, Blahnik KR, Jin VX, Farnham PJ (2010) ZNF274 recruits the histone methyltransferase SETDB1 to the 3' ends of ZNF genes. PLoS One 5 (12):e15082
-
(2010)
Plos One
, vol.5
, Issue.12
-
-
Frietze, S.1
O'geen, H.2
Blahnik, K.R.3
Jin, V.X.4
Farnham, P.J.5
-
22
-
-
0029858585
-
KAP-1, a novel corepressor for the highly conserved KRAB repression domain
-
Friedman JR, Fredericks WJ, Jensen DE, Speicher DW, Huang X-P, Neilson EG et al. (1996) KAP-1, a novel corepressor for the highly conserved KRAB repression domain. Genes & Dev 10 (16):2067-2078
-
(1996)
Genes &Amp; Dev
, vol.10
, Issue.16
, pp. 2067-2078
-
-
Friedman, J.R.1
Fredericks, W.J.2
Jensen, D.E.3
Speicher, H.W.4
Huang, X.-P.5
Neilson, E.G.6
-
23
-
-
33751007001
-
The KAP1 corepressor functions to coordinate the assembly of de novo HP1-demarcated microenvironments of heterochromatin required for KRAB zinc finger protein-mediated transcriptional repression
-
Sripathy SP, Stevens J, Schultz DC (2006) The KAP1 corepressor functions to coordinate the assembly of de novo HP1-demarcated microenvironments of heterochromatin required for KRAB zinc finger protein-mediated transcriptional repression. Mol Cell Biol 26 (22): 8623-8638
-
(2006)
Mol Cell Biol
, vol.26
, Issue.22
, pp. 8
-
-
Sripathy, S.P.1
Stevens, J.2
Schultz, D.C.3
-
24
-
-
27744511919
-
Structure and function of steroid receptor AF1 transactiva-tion domains: Induction of active conformations
-
Lavery DN, McEwan IJ (2005) Structure and function of steroid receptor AF1 transactiva-tion domains: induction of active conformations. Biochem J 391 (Pt 3):449-464
-
(2005)
Biochem J
, vol.391
, pp. 449-464
-
-
Lavery, D.N.1
McEwan, I.J.2
-
25
-
-
0034866270
-
Regulation of the rat glutathione S-transferase A2 gene by glucocorticoids: Involvement of both the glucocorticoid and pregnane X receptors
-
Falkner KC, Pinaire JA, Xiao GH, Geoghegan TE, Prough RA (2001) Regulation of the rat glutathione S-transferase A2 gene by glucocorticoids: involvement of both the glucocorticoid and pregnane X receptors. Mol Pharmacol 60 (3):611-619
-
(2001)
Mol Pharmacol
, vol.60
, Issue.3
, pp. 611-619
-
-
Falkner, K.C.1
Pinaire, J.A.2
Xiao, G.H.3
Geoghegan, T.E.4
Prough, R.A.5
-
26
-
-
0033347396
-
Opposing effects of corepressor and coacti-vators in determining the dose-response curve of agonists, and residual agonist activity of antagonists, for glucocorticoid receptor-regulated gene expression
-
Szapary D, Huang Y, Simons SS. (1999) Opposing effects of corepressor and coacti-vators in determining the dose-response curve of agonists, and residual agonist activity of antagonists, for glucocorticoid receptor-regulated gene expression. Mol Endocrinol 13 (12):2108-2121
-
(1999)
Mol Endocrinol
, vol.13
, Issue.12
, pp. 2108-2121
-
-
Szapary, D.1
Huang, Y.2
Simons, S.S.3
-
27
-
-
65249167505
-
DNA binding site sequence directs glucocorticoid receptor structure and activity
-
Meijsing SH, Pufall MA, So AY, Bates DL, Chen L, Yamamoto KR (2009) DNA binding site sequence directs glucocorticoid receptor structure and activity. Science 324 (5925):407-410
-
(2009)
Science
, vol.324
, Issue.5925
, pp. 407-410
-
-
Meijsing, S.H.1
Pufall, M.A.2
So, A.Y.3
Bates, D.L.4
Chen, L.5
Yamamoto, K.R.6
-
28
-
-
33747881750
-
The general transcription machinery and general cofactors
-
Thomas MC, Chiang CM (2006) The general transcription machinery and general cofactors. Crit Rev Biochem Mol Biol 41 (3):105-178
-
(2006)
Crit Rev Biochem Mol Biol
, vol.41
, Issue.3
, pp. 105-178
-
-
Thomas, M.C.1
Chiang, C.M.2
-
29
-
-
0034507632
-
Transcription of eukaryotic protein-coding genes
-
Lee TI, Young RA (2000) Transcription of eukaryotic protein-coding genes. Annu Rev Genet 34:77-137
-
(2000)
Annu Rev Genet
, vol.34
, pp. 77-137
-
-
Lee, T.I.1
Young, R.A.2
-
30
-
-
0030901305
-
The human immunodeficiency virus transactivator Tat interacts with the RNA polymerase II holoen-zyme
-
Cujec TP, Cho H, Maldonado E, Meyer J, Reinberg D, Peterlin BM (1997) The human immunodeficiency virus transactivator Tat interacts with the RNA polymerase II holoen-zyme. Mol Cell Biol 17 (4):1817-1823
-
(1997)
Mol Cell Biol
, vol.17
, Issue.4
, pp. 1817-1823
-
-
Cujec, T.P.1
Cho, H.2
Maldonado, E.3
Meyer, J.4
Reinberg, D.5
Peterlin, B.M.6
-
31
-
-
0030943297
-
Position-dependent transcriptional regulation of the murine dihydrofolate reductase promoter by the E2F transactivation domain
-
Fry CJ, Slansky JE, Farnham PJ (1997) Position-dependent transcriptional regulation of the murine dihydrofolate reductase promoter by the E2F transactivation domain. Mol Cell Biol 17(4):1966-1976
-
(1997)
Mol Cell Biol
, vol.17
, Issue.4
, pp. 1966-1976
-
-
Fry, C.J.1
Slansky, J.E.2
Farnham, P.J.3
-
32
-
-
0028036190
-
A glutamine-rich hydrophobic patch in transcription factor Sp1 contacts the dTAFII110 component of the Drosophila TFIID complex and mediates transcriptional activation
-
Gill G, Pascal E, Tseng ZH, Tjian R (1994) A glutamine-rich hydrophobic patch in transcription factor Sp1 contacts the dTAFII110 component of the Drosophila TFIID complex and mediates transcriptional activation. Proc Natl Acad Sci USA 91 (1):192-196
-
(1994)
Proc Natl Acad Sci USA
, vol.91
, Issue.1
, pp. 192-196
-
-
Gill, G.1
Pascal, E.2
Tseng, Z.H.3
Tjian, R.4
-
33
-
-
0027332365
-
Drosophila TAFII40 interacts with both a VP16 activation domain and the basal transcription factor TFIIB
-
Goodrich JA, Hoey T, Thut C, Admon A, Tjian R (1993) Drosophila TAFII40 interacts with both a VP16 activation domain and the basal transcription factor TFIIB. Cell 75 (3):519-530
-
(1993)
Cell
, vol.75
, Issue.3
, pp. 519-530
-
-
Goodrich, J.A.1
Hoey, T.2
Thut, C.3
Admon, A.4
Tjian, R.5
-
34
-
-
0023773323
-
Transcription factor ATF interacts with the TATA factor to facilitate establishment of a preinitiation complex
-
Horikoshi M, Hai T, Lin YS, Green MR, Roeder RG (1988) Transcription factor ATF interacts with the TATA factor to facilitate establishment of a preinitiation complex. Cell 54 (7):1033-1042
-
(1988)
Cell
, vol.54
, Issue.7
, pp. 1033-1042
-
-
Horikoshi, M.1
Lin, T.Y.2
Green, M.R.3
Roeder, R.G.4
-
35
-
-
0028181310
-
Direct interaction of human TFIID with the HIV-1 transactivator tat
-
Kashanchi F, Piras G, Radonovich MF, Duvall JF, Fattaey A, Chiang CM et al. (1994) Direct interaction of human TFIID with the HIV-1 transactivator tat. Nature 367 (6460):295-299
-
(1994)
Nature
, vol.367
, Issue.6460
, pp. 295-299
-
-
Kashanchi, F.1
Piras, G.2
Radonovich, M.F.3
Duvall, J.F.4
Fattaey, A.5
Chiang, C.M.6
-
36
-
-
0026076314
-
Binding of general transcription factor TFIIB to an acidic activating region
-
Lin Y-S, Ha I, Maldonado E, Reinberg D, Green MR (1991) Binding of general transcription factor TFIIB to an acidic activating region. Nature 353 (6344):569-571
-
(1991)
Nature
, vol.353
, Issue.6344
, pp. 569-571
-
-
Lin, Y.-S.1
Green, D.M.2
-
37
-
-
0029294548
-
A role for activator-mediated TFIIB recruitment in diverse aspects of transcriptional regulation
-
Roberts SG, Choy B, Walker SS, Lin YS, Green MR (1995) A role for activator-mediated TFIIB recruitment in diverse aspects of transcriptional regulation. Curr Biol 5 (5):508-516
-
(1995)
Curr Biol
, vol.5
, Issue.5
, pp. 508-516
-
-
Roberts, S.G.1
Choy, B.2
Walker, S.S.3
Lin, Y.S.4
Green, M.R.5
-
38
-
-
0025345242
-
Direct and selective binding of an acidic transcriptional activation domain to the TATA-box factor TFIID
-
Stringer KF, Ingles CJ, Greenblatt J (1990) Direct and selective binding of an acidic transcriptional activation domain to the TATA-box factor TFIID. Nature 345 (6278):783-786
-
(1990)
Nature
, vol.345
, Issue.6278
, pp. 783-786
-
-
Stringer, K.F.1
Ingles, C.J.2
Greenblatt, J.3
-
39
-
-
0028060212
-
Role of transcription factor TFIIF in serum response factor-activated transcription
-
Zhu H, Joliot V, Prywes R (1994) Role of transcription factor TFIIF in serum response factor-activated transcription. J Biol Chem 269 (5):3489-3497
-
(1994)
J Biol Chem
, vol.269
, Issue.5
, pp. 3489-3497
-
-
Zhu, H.1
Joliot, V.2
Prywes, R.3
-
40
-
-
0000127106
-
Proline-rich activator CTF1 targets the TFIIB assembly step during transcriptional activation
-
Kim TK, Roeder RG (1994) Proline-rich activator CTF1 targets the TFIIB assembly step during transcriptional activation. Proc Natl Acad Sci U S A 91 (10):4170-4174
-
(1994)
Proc Natl Acad Sci U S A
, vol.91
, Issue.10
, pp. 4170-4174
-
-
Kim, T.K.1
Roeder, R.G.2
-
41
-
-
0028949844
-
Cloning of an intrinsic human TFIID subunit that interacts with multiple transcriptional activators
-
Chiang C-M, Roeder RG (1995) Cloning of an intrinsic human TFIID subunit that interacts with multiple transcriptional activators. Science 267 (5197):531-536
-
(1995)
Science
, vol.267
, Issue.5197
, pp. 531-536
-
-
Chiang, C.-M.1
Roeder, R.G.2
-
42
-
-
0025786590
-
Coactivators for a proline-rich activator purified from the multisubunit human TFIID complex
-
Tanese N, Pugh BF, Tjian R (1991) Coactivators for a proline-rich activator purified from the multisubunit human TFIID complex. Genes Dev 5:2212-2224
-
(1991)
Genes Dev
, vol.5
, pp. 2212-2224
-
-
Tanese, N.1
Pugh, B.F.2
Tjian, R.3
-
43
-
-
0027406964
-
Molecular cloning and functional analysis of Drosophila TAF110 reveal properties expected of coactivators
-
Hoey T, Weinzierl RO, Gill G, Chen JL, Dynlacht BD, Tjian R (1993) Molecular cloning and functional analysis of Drosophila TAF110 reveal properties expected of coactivators. Cell 72 (2):247-260
-
(1993)
Cell
, vol.72
, Issue.2
, pp. 247-260
-
-
Hoey, T.1
Weinzierl, R.O.2
Gill, G.3
Chen, J.L.4
Dynlacht, B.D.5
Tjian, R.6
-
44
-
-
0028108925
-
Assembly of recombinant TFIID reveals differential coactivator requirements for distinct transcriptional activators
-
Chen J-L, Attardi DL, Verrijzer CP, Yokomori K, Tjian R (1994) Assembly of recombinant TFIID reveals differential coactivator requirements for distinct transcriptional activators. Cell 79 (1):93-105
-
(1994)
Cell
, vol.79
, Issue.1
, pp. 93-105
-
-
Chen, J.-L.1
Attardi, D.L.2
Verrijzer, C.P.3
Yokomori, K.4
Tjian, R.5
-
45
-
-
0027945048
-
Mutational analysis of the transcription activation domain of RelA: Identification of a highly synergistic minimal acidic activation module
-
Blair WS, Bogerd HP, Madore SJ, Cullen BR (1994) Mutational analysis of the transcription activation domain of RelA: identification of a highly synergistic minimal acidic activation module. Mol Cell Biol 14 (11):7226-7234
-
(1994)
Mol Cell Biol
, vol.14
, Issue.11
, pp. 7226-7234
-
-
Blair, W.S.1
Bogerd, H.P.2
Madore, S.J.3
Cullen, B.R.4
-
46
-
-
0028303752
-
Several hydrophobic amino acids in the p53 amino-terminal domain are required for transcriptional activation, binding to mdm-2 and the adenovirus 5 E1B 55-kD protein
-
Lin J, Chen J, Elenbaas B, Levine AJ (1994) Several hydrophobic amino acids in the p53 amino-terminal domain are required for transcriptional activation, binding to mdm-2 and the adenovirus 5 E1B 55-kD protein. Genes & Dev 8 (10):1235-1246
-
(1994)
Genes &Amp; Dev
, vol.8
, Issue.10
, pp. 1235-1246
-
-
Lin, J.1
Chen, J.2
Elenbaas, B.3
Levine, A.J.4
-
47
-
-
0029880348
-
Three functional classes of transcriptional activation domains
-
Blau J, Xiao H, McCracken S, O'Hare P, Greenblatt J, Bentley D (1996) Three functional classes of transcriptional activation domains. Mol Cell Biol 16 (5):2044-2055
-
(1996)
Mol Cell Biol
, vol.16
, Issue.5
, pp. 2044-2055
-
-
Blau, J.1
Xiao, J.H.2
McCracken, S.3
O'hare, P.4
Greenblatt, P.J.5
Bentley, D.6
-
48
-
-
0027772890
-
Eukaryotic activators function during multiple steps of preinitiation complex assembly
-
Choy B, Green MR (1993) Eukaryotic activators function during multiple steps of preinitiation complex assembly. Nature 366 (6455):531-536
-
(1993)
Nature
, vol.366
, Issue.6455
, pp. 531-536
-
-
Choy, B.1
Green, M.R.2
-
49
-
-
0028924386
-
Promoter-proximal pausing of RNA polymerase II defines a general rate-limiting step after transcription initiation
-
Krumm A, Hickey LB, Groudine M (1995) Promoter-proximal pausing of RNA polymerase II defines a general rate-limiting step after transcription initiation. Genes Dev 9 (5):559-572
-
(1995)
Genes Dev
, vol.9
, Issue.5
, pp. 559-572
-
-
Krumm, A.1
Hickey, A.L.2
Groudine, M.3
-
50
-
-
0030987367
-
Transactivation by CIITA, the type II bare lymphocyte syndrome-associated factor, requires participation of multiple regions of the TATA box binding protein
-
Mahanta SK, Scholl T, Yang FC, Strominger JL (1997) Transactivation by CIITA, the type II bare lymphocyte syndrome-associated factor, requires participation of multiple regions of the TATA box binding protein. Proc Natl Acad Sci U S A 94 (12):6324-6329
-
(1997)
Proc Natl Acad Sci U S A
, vol.94
, Issue.12
, pp. 6324-6329
-
-
Mahanta, S.K.1
Yang, F.C.2
-
51
-
-
0028236808
-
Transcriptional elongation by RNA polymerase II is stimulated by transactivators
-
Yankulov K, Blau J, Purton T, Roberts S, Bentley DL (1994) Transcriptional elongation by RNA polymerase II is stimulated by transactivators. Cell 77 (5):749-759
-
(1994)
Cell
, vol.77
, Issue.5
, pp. 749-759
-
-
Yankulov, K.1
Roberts, T.S.2
Bentley, D.L.3
-
52
-
-
70249104647
-
Defining mechanisms that regulate RNA polymerase II transcription in vivo
-
Fuda NJ, Ardehali MB, Lis JT (2009) Defining mechanisms that regulate RNA polymerase II transcription in vivo. Nature 461 (7261):186-192
-
(2009)
Nature
, vol.461
, Issue.7261
, pp. 186-192
-
-
Fuda, N.J.1
Ardehali, M.B.2
Lis, J.T.3
-
53
-
-
77951920690
-
C-Myc regulates transcriptional pause release
-
Rahl PB, Lin CY, Seila AC, Flynn RA, McCuine S, Burge CB et al. (2010) c-Myc regulates transcriptional pause release. Cell 141 (3):432-445
-
(2010)
Cell
, vol.141
, Issue.3
, pp. 432-445
-
-
Rahl, P.B.1
Lin, C.Y.2
Seila, A.C.3
Flynn, R.A.4
McCuine, S.5
Burge, C.B.6
-
55
-
-
0037131186
-
Myc recruits P-TEFb to mediate the final step in the transcriptional activation of the cad promoter
-
Eberhardy SR, Farnham PJ (2002) Myc recruits P-TEFb to mediate the final step in the transcriptional activation of the cad promoter. J Biol Chem 277 (42):40156-40162
-
(2002)
J Biol Chem
, vol.277
, Issue.42
, pp. 40156-40162
-
-
Eberhardy, S.R.1
Farnham, P.J.2
-
56
-
-
33947285072
-
The Myc transactivation domain promotes global phospho-rylation of the RNA polymerase II carboxy-terminal domain independently of direct DNA binding
-
Cowling VH, Cole MD (2007) The Myc transactivation domain promotes global phospho-rylation of the RNA polymerase II carboxy-terminal domain independently of direct DNA binding. Mol Cell Biol 27 (6):2059-2073
-
(2007)
Mol Cell Biol
, vol.27
, Issue.6
, pp. 2059-2073
-
-
Cowling, V.H.1
Cole, M.D.2
-
57
-
-
33744829805
-
Human transcription factors contain a high fraction of intrinsically disordered regions essential for transcriptional regulation
-
Minezaki Y, Homma K, Kinjo AR, Nishikawa K (2006) Human transcription factors contain a high fraction of intrinsically disordered regions essential for transcriptional regulation. J Mol Biol 359 (4):1137-1149
-
(2006)
J Mol Biol
, vol.359
, Issue.4
, pp. 1137-1149
-
-
Minezaki, Y.1
Homma, K.2
Kinjo, A.R.3
Nishikawa, K.4
-
58
-
-
0034869859
-
Latent and active p53 are identical in conformation
-
Ayed A, Mulder FA, Yi GS, Lu Y, Kay LE, Arrowsmith CH (2001) Latent and active p53 are identical in conformation. Nat Struct Biol 8 (9):756-760
-
(2001)
Nat Struct Biol
, vol.8
, Issue.9
, pp. 756-760
-
-
Ayed, A.1
Mulder, F.A.2
Yi, G.S.3
Lu, Y.4
Kay, L.E.5
Arrowsmith, C.H.6
-
59
-
-
0041384333
-
The N-terminal domain of p53 is natively unfolded
-
Dawson R, Muller L, Dehner A, Klein C, Kessler H, Buchner J (2003) The N-terminal domain of p53 is natively unfolded. J Mol Biol 332 (5):1131-1141
-
(2003)
J Mol Biol
, vol.332
, Issue.5
, pp. 1131-1141
-
-
Dawson, R.1
Muller, L.2
Dehner, A.3
Klein, C.4
Kessler, H.5
Buchner, J.6
-
60
-
-
33644673642
-
Structural details on mdm2-p53 interaction
-
Chi SW, Lee SH, Kim DH, Ahn MJ, Kim JS, Woo JY et al. (2005) Structural details on mdm2-p53 interaction. J Biol Chem 280 (46):38795-38802
-
(2005)
J Biol Chem
, vol.280
, Issue.46
, pp. 38795-38802
-
-
Chi, S.W.1
Lee, S.H.2
Kim, D.H.3
Ahn, M.J.4
Kim, J.S.5
Woo, J.Y.6
-
61
-
-
0033592822
-
The alpha-helical FXXPhiPhi motif in p53: TAF interaction and discrimination by MDM2
-
Uesugi M, Verdine GL (1999) The alpha-helical FXXPhiPhi motif in p53: TAF interaction and discrimination by MDM2. Proc Natl Acad Sci U S A 96 (26):14801-14806
-
(1999)
Proc Natl Acad Sci U S A
, vol.96
, Issue.26
, pp. 14801-14806
-
-
Uesugi, M.1
Verdine, M.G.2
-
62
-
-
58249105355
-
Role of intrinsically disordered protein regions/domains in transcriptional regulation
-
Garza AS, Ahmad N, Kumar R (2009) Role of intrinsically disordered protein regions/domains in transcriptional regulation. Life Sci 84 (7-8):189-193
-
(2009)
Life Sci
, vol.84
, Issue.7-8
, pp. 189-193
-
-
Garza, A.S.1
Ahmad, N.2
Kumar, R.3
-
63
-
-
1542743970
-
Induced alpha-helix structure in AF1 of the androgen receptor upon binding transcription factor TFIIF
-
Kumar R, Betney R, Li J, Thompson EB, McEwan IJ (2004) Induced alpha-helix structure in AF1 of the androgen receptor upon binding transcription factor TFIIF. Biochemistry 43 (11):3008-3013
-
(2004)
Biochemistry
, vol.43
, Issue.11
, pp. 3008-3013
-
-
Kumar, R.1
Betney, R.2
Li, J.3
Thompson, E.B.4
McEwan, I.J.5
-
64
-
-
0033198735
-
Structure of the ligand-binding domain of oestrogen receptor beta in the presence of a partial agonist and a full antagonist
-
Pike AC, Brzozowski AM, Hubbard RE, Bonn T, Thorsell AG, Engstrom O et al. (1999) Structure of the ligand-binding domain of oestrogen receptor beta in the presence of a partial agonist and a full antagonist. EMBO J 18 (17):4608-4618
-
(1999)
EMBO J
, vol.18
, Issue.17
, pp. 4608-4618
-
-
Pike, A.C.1
Brzozowski, A.M.2
Hubbard, R.E.3
Bonn, T.4
Thorsell, A.G.5
Engstrom, O.6
-
65
-
-
69949131670
-
Structural and functional relationships of the steroid hormone receptors' N-terminal transactivation domain
-
Kumar R, Litwack G (2009) Structural and functional relationships of the steroid hormone receptors' N-terminal transactivation domain. Steroids 74 (12):877-883
-
(2009)
Steroids
, vol.74
, Issue.12
, pp. 877-883
-
-
Kumar, R.1
Litwack, G.2
-
66
-
-
41949113742
-
The enhanceosome
-
Panne D (2008) The enhanceosome. Curr Opin Structural Biol 18 (2):236-242
-
(2008)
Curr Opin Structural Biol
, vol.18
, Issue.2
, pp. 236-242
-
-
Panne, D.1
-
67
-
-
0027538475
-
Transcription factor E2F binds as a heterodimer
-
Huber HE, Edwards G, Goodhart PJ, Patrick DR, Huang PS, Ivey-Hoyle M et al. (1993) Transcription factor E2F binds as a heterodimer. Proc Natl Acad Sci USA 90 (8):3525-3529
-
(1993)
Proc Natl Acad Sci USA
, vol.90
, Issue.8
, pp. 3525-3529
-
-
Huber, H.E.1
Edwards, G.2
Goodhart, P.J.3
Patrick, D.R.4
Huang, P.S.5
-
68
-
-
0027426917
-
Heterodimerization of the transcription factors E2F-1 and DP-1 leads to cooperative iraws-activation
-
Helin K, Wu C-L, Fattaey AR, Lees JA, Dynlacht BD, Ngwu C et al. (1993) Heterodimerization of the transcription factors E2F-1 and DP-1 leads to cooperative iraws-activation. Genes Dev 7 (10):1850-1861
-
(1993)
Genes Dev
, vol.7
, Issue.10
, pp. 1850-1861
-
-
Helin, K.1
Wu, C.-L.2
Fattaey, A.R.3
Lees, J.A.4
Dynlacht, B.D.5
Ngwu, C.6
-
69
-
-
0042161878
-
Crystal structure of a POU/HMG/DNA ternary complex suggests differential assembly of Oct4 and Sox2 on two enhancers
-
Remenyi A, Lins K, Nissen LJ, Reinbold R, Scholer HR, Wilmanns M (2003) Crystal structure of a POU/HMG/DNA ternary complex suggests differential assembly of Oct4 and Sox2 on two enhancers. Genes Dev 17 (16):2048-2059
-
(2003)
Genes Dev
, vol.17
, Issue.16
, pp. 2048-2059
-
-
Remenyi, A.1
Scholer, R.H.2
Wilmanns, M.3
-
70
-
-
0036710562
-
Differential activity by DNA-induced quarternary structures of POU transcription factors
-
Remenyi A, Tomilin A, Scholer HR, Wilmanns M (2002) Differential activity by DNA-induced quarternary structures of POU transcription factors. Biochem Pharmacol 64 (5-6):979-984
-
(2002)
Biochem Pharmacol
, vol.64
, Issue.5-6
, pp. 979-984
-
-
Remenyi, A.1
Tomilin, A.2
Scholer, H.R.3
Wilmanns, M.4
-
71
-
-
77950484709
-
Diversity in DNA recognition by p53 revealed by crystal structures with Hoogsteen base pairs
-
Kitayner M, Rozenberg H, Rohs R, Suad O, Rabinovich D, Honig B et al. (2010) Diversity in DNA recognition by p53 revealed by crystal structures with Hoogsteen base pairs. Nat Struct Mol Biol 17 (4):423-429
-
(2010)
Nat Struct Mol Biol
, vol.17
, Issue.4
, pp. 423-429
-
-
Kitayner, M.1
Rozenberg, H.2
Rohs, R.3
Suad, O.4
Rabinovich, D.5
Honig, B.6
-
72
-
-
0028152915
-
Mechanisms for syner-gistic activation of thyroid hormone receptor and retinoid X receptor on different response elements
-
Leng X, Blanco J, Tsai SY, Ozato K, O'Malley BW, Tsai MJ (1994) Mechanisms for syner-gistic activation of thyroid hormone receptor and retinoid X receptor on different response elements. J Biol Chem 269 (50):31436-31442
-
(1994)
J Biol Chem
, vol.269
, Issue.50
, pp. 31436-31442
-
-
Leng, X.1
Blanco, X.J.2
Tsai, S.Y.3
Ozato, K.4
O'malley, B.W.5
Tsai, M.J.6
-
73
-
-
0029946449
-
DNA-independent and DNA-dependent mechanisms regulate the differential heterodimerization of the isoforms of the thyroid hormone receptor with retinoid X receptor
-
Reginato MJ, Zhang J, Lazar MA (1996) DNA-independent and DNA-dependent mechanisms regulate the differential heterodimerization of the isoforms of the thyroid hormone receptor with retinoid X receptor. J Biol Chem 271 (45):28199-28205
-
(1996)
J Biol Chem
, vol.271
, Issue.45
, pp. 28199-28205
-
-
Reginato, M.J.1
Zhang, J.2
Lazar, M.A.3
-
74
-
-
34250369235
-
Identification of an OCT4 and SRY regulatory module using integrated computational and experimental genomics approaches
-
Jin VX, O'Geen H, Iyengar S, Green R, Farnham PJ (2007) Identification of an OCT4 and SRY regulatory module using integrated computational and experimental genomics approaches. Genome Research 17 (6):807-817
-
(2007)
Genome Research
, vol.17
, Issue.6
, pp. 807-817
-
-
Jin, V.X.1
O'geen, H.2
Iyengar, S.3
Green, R.4
Farnham, P.J.5
-
75
-
-
50849115172
-
Analysis of the mouse embryonic stem cell regulatory networks obtained by ChIP-chip and ChIP-PET
-
Mathur D, Danford TW, Boyer LA, Young RA, Gifford DK, Jaenisch R (2008) Analysis of the mouse embryonic stem cell regulatory networks obtained by ChIP-chip and ChIP-PET. Genome Biol 9 (8):R126
-
(2008)
Genome Biol
, vol.9
, Issue.8
-
-
Mathur, D.1
Danford, T.W.2
Boyer, L.A.3
Young, R.A.4
Gifford, D.K.5
Jaenisch, R.6
-
76
-
-
44649117905
-
Integration of external signaling pathways with the core transcriptional network in embryonic stem cells
-
Chen X, Xu H, Yuan P, Fang F, Huss M, Vega VB et al. (2008) Integration of external signaling pathways with the core transcriptional network in embryonic stem cells. Cell 133 (6):1106-1117
-
(2008)
Cell
, vol.133
, Issue.6
, pp. 1106-1117
-
-
Chen, X.1
Yuan, H.P.2
Huss, F.M.3
Vega, V.B.4
-
77
-
-
21644434480
-
Transcriptional regulation of nanog by OCT4 and SOX2
-
Rodda DJ, Chew JL, Lim LH, Loh YH, Wang B, Ng HH et al. (2005) Transcriptional regulation of nanog by OCT4 and SOX2. J Biol Chem 280 (26):24731-24737
-
(2005)
J Biol Chem
, vol.280
, Issue.26
, pp. 24731-24737
-
-
Rodda, D.J.1
Chew, J.L.2
Lim, L.H.3
Loh, Y.H.4
Wang, B.5
Ng, H.H.6
-
78
-
-
33847076849
-
Chromatin modifications and their function
-
Kouzarides T (2007) Chromatin modifications and their function. Cell 128:693-705
-
(2007)
Cell
, vol.128
, pp. 693-705
-
-
Kouzarides, T.1
-
79
-
-
0029997146
-
The CBP co-activator stimulates E2F1/DP1 activity
-
Trouche D, Cook A, Kouzarides T (1996) The CBP co-activator stimulates E2F1/DP1 activity. Nucleic Acids Res 24 (21):4139-4145
-
(1996)
Nucleic Acids Res
, vol.24
, Issue.21
, pp. 4139-4145
-
-
Trouche, D.1
Cook, A.2
Kouzarides, T.3
-
80
-
-
0032984610
-
Activation of the murine dihydrofolate reductase promoter by E2F1: A requirement for CBP recruitment
-
Fry CJ, Pearson A, Malinowski E, Bartley SM, Greenblatt J, Farnham PJ (1999) Activation of the murine dihydrofolate reductase promoter by E2F1: A requirement for CBP recruitment. J Biol Chem 274 (22):15883-15891
-
(1999)
J Biol Chem
, vol.274
, Issue.22
, pp. 15883-15891
-
-
Fry, C.J.1
Pearson, A.2
Malinowski, E.3
Bartley, S.M.4
Greenblatt, J.5
Farnham, P.J.6
-
81
-
-
0037052539
-
A complex with chro-matin modifiers that occupies E2F- and Myc-responsive genes in G0 cells
-
Ogawa H, Ishiguro K, Gaubatz S, Livingston DM, Nakatani Y (2002) A complex with chro-matin modifiers that occupies E2F- and Myc-responsive genes in G0 cells. Science 296 (5570):1132-1136
-
(2002)
Science
, vol.296
, Issue.5570
, pp. 1132-1136
-
-
Ogawa, H.1
Ishiguro, K.2
Gaubatz, S.3
Livingston, D.M.4
Nakatani, Y.5
-
82
-
-
35949003052
-
The E2F6 transcription factor is a component of the mammalian Bmi1-containing polycomb complex
-
Trimarchi JM, Fairchild B, Wen J, Lees JA (2001) The E2F6 transcription factor is a component of the mammalian Bmi1-containing polycomb complex. Proc Natl Acad Sci USA 95 (6):2850-2855
-
(2001)
Proc Natl Acad Sci USA
, vol.9
, Issue.6
, pp. 2850-2855
-
-
Trimarchi, J.M.1
Fairchild, B.2
Wen, J.3
Lees, J.A.4
-
83
-
-
19944431321
-
A novel repressive E2F6 complex containing the polycomb group protein, EPC1, that interacts with EZH2 in a proliferation-specific manner
-
Attwooll C, Oddi S, Cartwright P, Prosperini E, Agger K, Steensgaard P et al. (2005) A novel repressive E2F6 complex containing the polycomb group protein, EPC1, that interacts with EZH2 in a proliferation-specific manner. J Biol Chem 280 (2):1199-1208
-
(2005)
J Biol Chem
, vol.280
, Issue.2
, pp. 1199-1208
-
-
Attwooll, C.1
Oddi, S.2
Cartwright, P.3
Prosperini, E.4
Agger, K.5
Steensgaard, P.6
-
84
-
-
35949000033
-
A comprehensive ChIP-chip analysis of E2F1, E2F4, and E2F6 in normal and tumor cells reveals iterchangeable roles of E2F family members
-
Xu X, Bieda M, Jin VX, Rabinovich A, Oberley MJ, Green R et al. (2007) A comprehensive ChIP-chip analysis of E2F1, E2F4, and E2F6 in normal and tumor cells reveals iterchangeable roles of E2F family members. Genome Res 17 (11):1550-1561
-
(2007)
Genome Res
, vol.17
, Issue.11
, pp. 1550-1561
-
-
Xu, X.1
Bieda, M.2
Jin, V.X.3
Rabinovich, A.4
Oberley, M.J.5
Green, R.6
-
85
-
-
0142180081
-
E2F6 negatively regulates BRCA1 in human cancer cells without methylation of histone H3 on lysine 9
-
Oberley MJ, Inman D, Farnham PJ (2003) E2F6 negatively regulates BRCA1 in human cancer cells without methylation of histone H3 on lysine 9. J Biol Chem 278 (43):42466-42476
-
(2003)
J Biol Chem
, vol.278
, Issue.43
, pp. 42466-42476
-
-
Oberley, M.J.1
Inman, D.2
Farnham, P.J.3
-
86
-
-
0034811677
-
Transcriptional repression by the retinoblastoma protein through the recruitment of a histone methyltrans-ferase
-
Vandel L, Nicolas E, Vaute O, Ferreira R, Ait-si-ali S, Trouche D (2001) Transcriptional repression by the retinoblastoma protein through the recruitment of a histone methyltrans-ferase. Mol Cell Biol 21 (19):6484-6494
-
(2001)
Mol Cell Biol
, vol.21
, Issue.19
, pp. 6484-6494
-
-
Vandel, L.1
Nicolas, E.2
Vaute, O.3
Ait-Si-Ali, R.S.4
Trouche, D.5
-
87
-
-
20244376464
-
Role of the RB1 family in stabilizing histone methylation at constitutive heterochromatin
-
Gonzalo S, Garcia-Cao M, Fraga MF, Schotta G, Peters AH, Cotter SE et al. (2005) Role of the RB1 family in stabilizing histone methylation at constitutive heterochromatin. Nat Cell Biol 7 (4):420-428
-
(2005)
Nat Cell Biol
, vol.7
, Issue.4
, pp. 420-428
-
-
Gonzalo, S.1
Garcia-Cao, M.2
Schotta, G.3
Cotter, A.4
-
88
-
-
0033919595
-
DNMT1 forms a complex with Rb, E2F1 and HDAC1 and represses transcription from E2F-responsive promoters
-
Robertson KD, Ait-Si-Ali S, Yokochi T, Wade PA, Jones PL, Wolffe AP (2000) DNMT1 forms a complex with Rb, E2F1 and HDAC1 and represses transcription from E2F-responsive promoters. Nature genetics 25 (3):338-342
-
(2000)
Nature Genetics
, vol.25
, Issue.3
, pp. 338-342
-
-
Robertson, K.D.1
Ait-Si-Ali, S.2
Yokochi, T.3
Wade, P.A.4
Jones, P.L.5
Wolffe, A.P.6
-
89
-
-
0037083752
-
The retinoblastoma gene product interacts with maintenance human DNA (Cytosine-5) methyltransferase and modulates its activity
-
Pradhan S, Kim G-D (2002) The retinoblastoma gene product interacts with maintenance human DNA (cytosine-5) methyltransferase and modulates its activity. EMBO J 21:779-788
-
(2002)
EMBO J
, vol.21
, pp. 779-788
-
-
Pradhan, S.1
Kim, G.-D.2
-
90
-
-
34249048369
-
L3MBTL1, a histone-methylation-dependent chromatin lock
-
Trojer P, Li G, Sims RJ, 3rd, Vaquero A, Kalakonda N, Boccuni P et al. (2007) L3MBTL1, a histone-methylation-dependent chromatin lock. Cell 129 (5):915-928
-
(2007)
Cell
, vol.129
, Issue.5
, pp. 915-928
-
-
Trojer, P.1
Li, G.2
Sims, R.J.3
Vaquero, A.4
Boccuni, P.5
-
91
-
-
41849100358
-
Beyond histone methyl-lysine binding: How malignant brain tumor (MBT) protein L3MBTL1 impacts chromatin structure
-
Trojer P, Reinberg D (2008) Beyond histone methyl-lysine binding: how malignant brain tumor (MBT) protein L3MBTL1 impacts chromatin structure. Cell Cycle 7 (5): 578-585
-
(2008)
Cell Cycle
, vol.7
, Issue.5
, pp. 578-585
-
-
Trojer, P.1
Reinberg, D.2
-
92
-
-
67649800263
-
Dynamic Histone H1 Isotype 4 Methylation and Demethylation by Histone Lysine Methyltransferase G9a/KMT1C and the Jumonji Domain-containing JMJD2/KDM4 Proteins
-
Trojer P, Zhang J, Yonezawa M, Schmidt A, Zheng H, Jenuwein T et al. (2009) Dynamic Histone H1 Isotype 4 Methylation and Demethylation by Histone Lysine Methyltransferase G9a/KMT1C and the Jumonji Domain-containing JMJD2/KDM4 Proteins. J Biol Chem 284 (13):8395-8405
-
(2009)
J Biol Chem
, vol.284
, Issue.13
, pp. 8395-8405
-
-
Trojer, P.1
Zhang, J.2
Yonezawa, M.3
Schmidt, A.4
Zheng, H.5
Jenuwein, T.6
-
93
-
-
74149083175
-
PRb, a local chromatin organizer with global possibilities
-
Longworth MS, Dyson NJ (2010) pRb, a local chromatin organizer with global possibilities. Chromosoma 119(1):1–11
-
(2010)
Chromosoma
, vol.119
, Issue.1
, pp. 1-11
-
-
Longworth, M.S.1
Dyson, M.2
-
94
-
-
33744792310
-
Sensors and signals: A coactiva-tor/corepressor/epigenetic code for integrating signal-dependent programs oftranscriptional response
-
Rosenfeld MG, Lunyak VV, Glass CK (2006) Sensors and signals: a coactiva-tor/corepressor/epigenetic code for integrating signal-dependent programs oftranscriptional response. Genes Dev 20 (11):1405-1428
-
(2006)
Genes Dev
, vol.20
, Issue.11
, pp. 1405-1428
-
-
Rosenfeld, M.G.1
Lunyak, V.V.2
Glass, C.K.3
-
95
-
-
64749109224
-
Minireview: Protein arginine methylation of nonhistone proteins in transcriptional regulation
-
Lee YH, Stallcup MR (2009) Minireview: protein arginine methylation of nonhistone proteins in transcriptional regulation. Mol Endocrinol 23 (4):425-433
-
(2009)
Mol Endocrinol
, vol.23
, Issue.4
, pp. 425-433
-
-
Lee, Y.H.1
Stallcup, M.R.2
-
96
-
-
56049090769
-
Acetylation of non-histone proteins modulates cellular signalling at multiple levels
-
Spange S, Wagner T, Heinzel T, Kramer OH (2009) Acetylation of non-histone proteins modulates cellular signalling at multiple levels. Int J Biochem Cell Biol 41 (1):185-198
-
(2009)
Int J Biochem Cell Biol
, vol.41
, Issue.1
, pp. 185-198
-
-
Spange, S.1
Wagner, T.2
Heinzel, T.3
Kramer, O.H.4
-
97
-
-
0032479304
-
Steroid receptor coactivator-1 coactivates activating protein-1-mediated transactivations through interaction with the c-Jun and c-Fos subunits
-
Lee SK, Kim HJ, Na SY, Kim TS, Choi HS, Im SY et al. (1998) Steroid receptor coactivator-1 coactivates activating protein-1-mediated transactivations through interaction with the c-Jun and c-Fos subunits. J Biol Chem 273 (27):16651-16654
-
(1998)
J Biol Chem
, vol.273
, Issue.27
, pp. 16651-16654
-
-
Lee, S.K.1
Kim, S.2
Na, S.Y.3
Kim, S.4
Choi, H.S.5
-
98
-
-
33746539852
-
Role of steroid receptor coactivators in glucocorti-coid and transforming growth factor beta regulation of plasminogen activator inhibitor gene expression
-
Li G, Heaton JH, Gelehrter TD (2006) Role of steroid receptor coactivators in glucocorti-coid and transforming growth factor beta regulation of plasminogen activator inhibitor gene expression. Mol Endocrinol 20 (5):1025-1034
-
(2006)
Mol Endocrinol
, vol.20
, Issue.5
, pp. 1025-1034
-
-
Li, G.1
Heaton, J.H.2
Gelehrter, T.D.3
-
99
-
-
20444417421
-
Coactivators and corepressors of NF-kappaB in IkappaB alpha gene promoter
-
Gao Z, Chiao P, Zhang X, Lazar MA, Seto E, Young HA et al. (2005) Coactivators and corepressors of NF-kappaB in IkappaB alpha gene promoter. J Biol Chem 280 (22): 21091-21098
-
(2005)
J Biol Chem
, vol.280
, Issue.22
, pp. 21091-21098
-
-
Gao, Z.1
Chiao, P.2
Zhang, X.3
Lazar, M.A.4
Seto, E.5
Young, H.A.6
-
100
-
-
2942628182
-
ACTR/AIB1 functions as an E2F1 coactivator to promote breast cancer cell proliferation and antiestrogen resistance
-
Louie MC, Zou JX, Rabinovich A, Chen HW (2004) ACTR/AIB1 functions as an E2F1 coactivator to promote breast cancer cell proliferation and antiestrogen resistance. Mol Cell Biol 24 (12):5157-5171
-
(2004)
Mol Cell Biol
, vol.24
, Issue.12
, pp. 5157-5171
-
-
Louie, M.C.1
Zou, J.X.2
Rabinovich, A.3
Chen, H.W.4
-
101
-
-
21244446214
-
Rb enhances p160/SRC coactivator-dependent activity of nuclear receptors and hormone responsiveness
-
Batsche E, Desroches J, Bilodeau S, Gauthier Y, Drouin J (2005) Rb enhances p160/SRC coactivator-dependent activity of nuclear receptors and hormone responsiveness. J Biol Chem 280 (20):19746-19756
-
(2005)
J Biol Chem
, vol.280
, Issue.20
, pp. 19746-19756
-
-
Batsche, E.1
Desroches, J.2
Bilodeau, S.3
Gauthier, Y.4
Drouin, J.5
-
102
-
-
0033305404
-
Steroid receptor coactivator-1 and its family members differentially regulate transactivation by the tumor suppressor protein p53
-
Lee SK, Kim HJ, Kim JW, Lee JW (1999) Steroid receptor coactivator-1 and its family members differentially regulate transactivation by the tumor suppressor protein p53. Mol Endocrinol 13 (11):1924-1933
-
(1999)
Mol Endocrinol
, vol.13
, Issue.11
, pp. 1924-1933
-
-
Lee, S.K.1
Kim, H.J.2
Kim, J.W.3
Lee, J.W.4
-
103
-
-
0041589541
-
Nuclear receptors: A rendezvous for chromatin remodeling factors
-
Belandia B, Parker MG (2003) Nuclear receptors: a rendezvous for chromatin remodeling factors. Cell 114 (3):277-280
-
(2003)
Cell
, vol.114
, Issue.3
, pp. 277-280
-
-
Belandia, B.1
Parker, M.G.2
-
104
-
-
2342573009
-
The role of corepressors in transcriptional regulation by nuclear hormone receptors
-
Privalsky ML (2004) The role of corepressors in transcriptional regulation by nuclear hormone receptors. Annu Rev Physiol 66:315-360
-
(2004)
Annu Rev Physiol
, vol.66
, pp. 315-360
-
-
Privalsky, M.L.1
-
105
-
-
0036183641
-
Critical residues within the BTB domain of PLZF and Bcl-6 modulate interaction with corepressors
-
Melnick A, Carlile G, Ahmad KF, Kiang CL, Corcoran C, Bardwell V et al. (2002) Critical residues within the BTB domain of PLZF and Bcl-6 modulate interaction with corepressors. Mol Cell Biol 22 (6):1804-1818
-
(2002)
Mol Cell Biol
, vol.22
, Issue.6
, pp. 1804-1818
-
-
Melnick, A.1
Carlile, G.2
Ahmad, K.F.3
Kiang, C.L.4
Corcoran, C.5
Bardwell, V.6
-
106
-
-
0141638426
-
N-CoR mediates DNA methylation-dependent repression through a methyl CpG binding protein Kaiso
-
Yoon HG, Chan DW, Reynolds AB, Qin J, Wong J (2003) N-CoR mediates DNA methylation-dependent repression through a methyl CpG binding protein Kaiso. Mol Cell 12 (3):723-734
-
(2003)
Mol Cell
, vol.12
, Issue.3
, pp. 723-734
-
-
Yoon, H.G.1
Chan, D.W.2
Reynolds, A.B.3
Qin, J.4
Wong, J.5
-
107
-
-
0032189224
-
Identification of Bach2 as a B-cell-specific partner for small maf proteins that negatively regulate the immunoglobulin heavy chain gene 3' enhancer
-
Muto A, Hoshino H, Madisen L, Yanai N, Obinata M, Karasuyama H et al. (1998) Identification of Bach2 as a B-cell-specific partner for small maf proteins that negatively regulate the immunoglobulin heavy chain gene 3' enhancer. EMBO J 17 (19):5734-5743
-
(1998)
EMBO J
, vol.17
, Issue.19
, pp. 5734-5743
-
-
Muto, A.1
Hoshino, H.2
Madisen, L.3
Yanai, L.N.4
Obinata, M.5
Karasuyama, H.6
-
108
-
-
0030923519
-
Corepressor SMRT binds the BTB/POZ repressing domain of the LAZ3/BCL6 oncoprotein
-
Dhordain P, Albagli O, Lin RJ, Ansieau S, Quief S, Leutz A et al. (1997) Corepressor SMRT binds the BTB/POZ repressing domain of the LAZ3/BCL6 oncoprotein. Proc Natl Acad Sci US A 94 (20):10762-10767
-
(1997)
Proc Natl Acad Sci US A
, vol.94
, Issue.20
, pp. 10762-10767
-
-
Dhordain, P.1
Albagli, O.2
Lin, R.J.3
Ansieau, S.4
Quief, S.5
Leutz, A.6
-
109
-
-
33750333540
-
POZ for effect-POZ-ZF transcription factors in cancer and development
-
Kelly KF, Daniel JM (2006) POZ for effect-POZ-ZF transcription factors in cancer and development. Trends Cell Biol 16 (11):578-587
-
(2006)
Trends Cell Biol
, vol.16
, Issue.11
, pp. 578-587
-
-
Kelly, K.F.1
Daniel, J.M.2
-
110
-
-
0346274978
-
KRAB-containing zinc-finger repressor proteins
-
Urrutia R (2003) KRAB-containing zinc-finger repressor proteins. Genome Biol 4 (10):231
-
(2003)
Genome Biol
, vol.4
, Issue.10
, pp. 231
-
-
Urrutia, R.1
-
111
-
-
0037089626
-
SETDB1: A novel KAP-1-associated histone H3, lysine 9-specific methyltransferase that contributes to HP1-mediated silencing of euchromatic genes by KRAB zinc-finger proteins
-
Schultz DC, Ayyanathan K, Negorev D, Maul GG, Rauscher FJ, 3rd (2002) SETDB1: a novel KAP-1-associated histone H3, lysine 9-specific methyltransferase that contributes to HP1-mediated silencing of euchromatic genes by KRAB zinc-finger proteins. Genes Dev 16 (8):919-932
-
(2002)
Genes Dev
, vol.16
, Issue.8
, pp. 919-932
-
-
Schultz, D.C.1
Ayyanathan, K.2
Negorev, D.3
Maul, G.G.4
Rauscher, F.J.5
-
112
-
-
0035118229
-
Targeting histone deacetylase complexes via KRAB-zinc finger proteins: The PhD and bromodomains of KAP-1 form a coopeative unit that recruits a novel isoform of the Mi-2alpha subunit of NuRD
-
Schultz DC, Friedman JR, Rauscher F (2001) Targeting histone deacetylase complexes via KRAB-zinc finger proteins: the PhD and bromodomains of KAP-1 form a coopeative unit that recruits a novel isoform of the Mi-2alpha subunit of NuRD. Genes Dev 15 (4):428-443
-
(2001)
Genes Dev
, vol.15
, Issue.4
, pp. 428-443
-
-
Schultz, D.C.1
Friedman, D.2
Rauscher, F.3
-
113
-
-
77950421703
-
KRAB-zinc finger proteins and KAP1 can mediate long-range transcriptional repression through heterochromatin spreading
-
Groner AC, Meylan S, Ciuffi A, Zangger N, Ambrosini G, Denervaud N et al. (2010) KRAB-zinc finger proteins and KAP1 can mediate long-range transcriptional repression through heterochromatin spreading. PLoS Genet 6 (3):e1000869
-
(2010)
Plos Genet
, vol.6
, Issue.3
-
-
Groner, A.C.1
Meylan, S.2
Ciuffi, A.3
Zangger, N.4
Ambrosini, G.5
Denervaud, N.6
-
114
-
-
75549090603
-
The Pfam protein families database
-
(Database issue
-
Finn RD, Mistry J, Tate J, Coggill P, Heger A, Pollington JE et al. (2010) The Pfam protein families database. Nucleic Acids Res 38 (Database issue):211-222
-
(2010)
Nucleic Acids Res
, vol.38
, pp. 211-222
-
-
Finn, R.D.1
Mistry, J.2
Tate, J.3
Coggill, P.4
Heger, A.5
Pollington, J.E.6
|