-
1
-
-
0006132932
-
Fatty acids and eicosanoids regulate gene expression through direct interactions with peroxisome proliferator-activated receptors α and γ
-
Kliewer SA, Sundseth SS, Jones SA, Brown PJ, Wisely GB, Koble CS, Devchand P, Wahli W, Willson TM, Lenhard JM, et al. Fatty acids and eicosanoids regulate gene expression through direct interactions with peroxisome proliferator-activated receptors α and γ. Proc Natl Acad Sci U S A 1997, 94:4318-4323.
-
(1997)
Proc Natl Acad Sci U S A
, vol.94
, pp. 4318-4323
-
-
Kliewer, S.A.1
Sundseth, S.S.2
Jones, S.A.3
Brown, P.J.4
Wisely, G.B.5
Koble, C.S.6
Devchand, P.7
Wahli, W.8
Willson, T.M.9
Lenhard, J.M.10
-
2
-
-
0028225462
-
SREBP-1, a membrane-bound transcription factor released by sterol-regulated proteolysis
-
Wang X, Sato R, Brown MS, Hua X, Goldstein JL. SREBP-1, a membrane-bound transcription factor released by sterol-regulated proteolysis. Cell 1994, 77:53-62.
-
(1994)
Cell
, vol.77
, pp. 53-62
-
-
Wang, X.1
Sato, R.2
Brown, M.S.3
Hua, X.4
Goldstein, J.L.5
-
3
-
-
0036183630
-
The mechanisms of action of PPARs
-
Berger J, Moller DE. The mechanisms of action of PPARs. Annu Rev Med 2002, 53:409-435.
-
(2002)
Annu Rev Med
, vol.53
, pp. 409-435
-
-
Berger, J.1
Moller, D.E.2
-
4
-
-
80054976920
-
Molecular basis underlying LuxR family transcription factors and function diversity and implications for novel antibiotic drug targets
-
Zeng L-R, Xie J-P. Molecular basis underlying LuxR family transcription factors and function diversity and implications for novel antibiotic drug targets. J Cell Biochem 2011, 112:3079-3084.
-
(2011)
J Cell Biochem
, vol.112
, pp. 3079-3084
-
-
Zeng, L.-R.1
Xie, J.-P.2
-
5
-
-
79551565620
-
Amino acid signaling to mTOR mediated by inositol polyphosphate multikinase
-
Kim S, Kim SF, Maag D, Maxwell MJ, Resnick AC, Juluri KR, Chakraborty A, Koldobskiy MA, Cha SH, Barrow R, et al. Amino acid signaling to mTOR mediated by inositol polyphosphate multikinase. Cell Metab 2011, 13:215-221.
-
(2011)
Cell Metab
, vol.13
, pp. 215-221
-
-
Kim, S.1
Kim, S.F.2
Maag, D.3
Maxwell, M.J.4
Resnick, A.C.5
Juluri, K.R.6
Chakraborty, A.7
Koldobskiy, M.A.8
Cha, S.H.9
Barrow, R.10
-
6
-
-
38349148383
-
Inositol polyphosphates: a new frontier for regulating gene expression
-
Alcázar-Román AR, Wente SR. Inositol polyphosphates: a new frontier for regulating gene expression. Chromosoma 2007, 117:1-13.
-
(2007)
Chromosoma
, vol.117
, pp. 1-13
-
-
Alcázar-Román, A.R.1
Wente, S.R.2
-
7
-
-
0036753365
-
Genetic control by a metabolite binding mRNA
-
Nahvi A, Sudarsan N, Ebert MS, Zou X, Brown KL, Breaker RR. Genetic control by a metabolite binding mRNA. Chem Biol 2002, 9:1043.
-
(2002)
Chem Biol
, vol.9
, pp. 1043
-
-
Nahvi, A.1
Sudarsan, N.2
Ebert, M.S.3
Zou, X.4
Brown, K.L.5
Breaker, R.R.6
-
8
-
-
27144527479
-
Regulation of bacterial gene expression by riboswitches
-
Winkler WC, Breaker RR. Regulation of bacterial gene expression by riboswitches. Annu Rev Microbiol 2005, 59:487-517.
-
(2005)
Annu Rev Microbiol
, vol.59
, pp. 487-517
-
-
Winkler, W.C.1
Breaker, R.R.2
-
9
-
-
67650713931
-
The structural and functional diversity of metabolite-binding riboswitches
-
Roth A, Breaker RR. The structural and functional diversity of metabolite-binding riboswitches. Annu Rev Biochem 2009, 78:305-334.
-
(2009)
Annu Rev Biochem
, vol.78
, pp. 305-334
-
-
Roth, A.1
Breaker, R.R.2
-
11
-
-
0346366823
-
Thiamine-regulated gene expression of Aspergillus oryzae thiA requires splicing of the intron containing a riboswitch-like domain in the 5′-UTR
-
Kubodera T, Watanabe M, Yoshiuchi K, Yamashita N, Nishimura A, Nakai S, Gomi K, Hanamoto H. Thiamine-regulated gene expression of Aspergillus oryzae thiA requires splicing of the intron containing a riboswitch-like domain in the 5′-UTR. FEBS Lett 2003, 555:516-520.
-
(2003)
FEBS Lett
, vol.555
, pp. 516-520
-
-
Kubodera, T.1
Watanabe, M.2
Yoshiuchi, K.3
Yamashita, N.4
Nishimura, A.5
Nakai, S.6
Gomi, K.7
Hanamoto, H.8
-
12
-
-
34249278470
-
Control of alternative RNA splicing and gene expression by eukaryotic riboswitches
-
Cheah MT, Wachter A, Sudarsan N, Breaker RR. Control of alternative RNA splicing and gene expression by eukaryotic riboswitches. Nature 2007, 447:497-500.
-
(2007)
Nature
, vol.447
, pp. 497-500
-
-
Cheah, M.T.1
Wachter, A.2
Sudarsan, N.3
Breaker, R.R.4
-
13
-
-
38049169167
-
Thiamine biosynthesis in algae is regulated by riboswitches
-
Croft MT, Moulin M, Webb ME, Smith AG. Thiamine biosynthesis in algae is regulated by riboswitches. Proc Natl Acad Sci 2007, 104:20770-20775.
-
(2007)
Proc Natl Acad Sci
, vol.104
, pp. 20770-20775
-
-
Croft, M.T.1
Moulin, M.2
Webb, M.E.3
Smith, A.G.4
-
14
-
-
53149095767
-
Switching the light on plant riboswitches
-
Bocobza SE, Aharoni A. Switching the light on plant riboswitches. Trends Plant Sci 2008, 13:526-533.
-
(2008)
Trends Plant Sci
, vol.13
, pp. 526-533
-
-
Bocobza, S.E.1
Aharoni, A.2
-
15
-
-
0038136962
-
Metabolite-binding RNA domains are present in the genes of eukaryotes
-
Sudarsan N, Barrick JE, Breaker RR. Metabolite-binding RNA domains are present in the genes of eukaryotes. RNA 2003, 9:644-647.
-
(2003)
RNA
, vol.9
, pp. 644-647
-
-
Sudarsan, N.1
Barrick, J.E.2
Breaker, R.R.3
-
16
-
-
46049091176
-
Structural basis of thiamine pyrophosphate analogues binding to the eukaryotic riboswitch
-
Thore S, Frick C, Ban N. Structural basis of thiamine pyrophosphate analogues binding to the eukaryotic riboswitch. J Am Chem Soc 2008, 130:8116-8117.
-
(2008)
J Am Chem Soc
, vol.130
, pp. 8116-8117
-
-
Thore, S.1
Frick, C.2
Ban, N.3
-
17
-
-
33744469562
-
Structure of the eukaryotic thiamine pyrophosphate riboswitch with its regulatory ligand
-
Thore S, Leibundgut M, Ban N. Structure of the eukaryotic thiamine pyrophosphate riboswitch with its regulatory ligand. Science 2006, 312:1208-1211.
-
(2006)
Science
, vol.312
, pp. 1208-1211
-
-
Thore, S.1
Leibundgut, M.2
Ban, N.3
-
18
-
-
0042834096
-
Regulation of the vitamin B12 metabolism and transport in bacteria by a conserved RNA structural element
-
Vitreschak AG, Rodionov DA, Mironov AA, Gelfand MS. Regulation of the vitamin B12 metabolism and transport in bacteria by a conserved RNA structural element. RNA 2003, 9:1084-1097.
-
(2003)
RNA
, vol.9
, pp. 1084-1097
-
-
Vitreschak, A.G.1
Rodionov, D.A.2
Mironov, A.A.3
Gelfand, M.S.4
-
19
-
-
2342511433
-
New RNA motifs suggest an expanded scope for riboswitches in bacterial genetic control
-
Barrick JE, Corbino KA, Winkler WC, Nahvi A, Mandal M, Collins J, Lee M, Roth A, Sudarsan N, Jona I, et al. New RNA motifs suggest an expanded scope for riboswitches in bacterial genetic control. Proc Natl Acad Sci U S A 2004, 101:6421-6426.
-
(2004)
Proc Natl Acad Sci U S A
, vol.101
, pp. 6421-6426
-
-
Barrick, J.E.1
Corbino, K.A.2
Winkler, W.C.3
Nahvi, A.4
Mandal, M.5
Collins, J.6
Lee, M.7
Roth, A.8
Sudarsan, N.9
Jona, I.10
-
20
-
-
4444378880
-
Conserved regulatory motifs in bacteria: riboswitches and beyond
-
Abreu-Goodger C, Ontiveros-Palacios N, Ciria R, Merino E. Conserved regulatory motifs in bacteria: riboswitches and beyond. Trends Genet 2004, 20:475-479.
-
(2004)
Trends Genet
, vol.20
, pp. 475-479
-
-
Abreu-Goodger, C.1
Ontiveros-Palacios, N.2
Ciria, R.3
Merino, E.4
-
21
-
-
34547873145
-
Identification of 22 candidate structured RNAs in bacteria using the CMfinder comparative genomics pipeline
-
Weinberg Z, Barrick JE, Yao Z, Roth A, Kim JN, Gore J, Wang JX, Lee ER, Block KF, Sudarsan N, et al. Identification of 22 candidate structured RNAs in bacteria using the CMfinder comparative genomics pipeline. Nucleic Acids Res 2007, 35:4809-4819.
-
(2007)
Nucleic Acids Res
, vol.35
, pp. 4809-4819
-
-
Weinberg, Z.1
Barrick, J.E.2
Yao, Z.3
Roth, A.4
Kim, J.N.5
Gore, J.6
Wang, J.X.7
Lee, E.R.8
Block, K.F.9
Sudarsan, N.10
-
22
-
-
41649108068
-
Confirmation of a second natural preQ1 aptamer class in Streptococcaceae bacteria
-
Meyer MM, Roth A, Chervin SM, Garcia GA, Breaker RR. Confirmation of a second natural preQ1 aptamer class in Streptococcaceae bacteria. RNA 2008, 14:685-695.
-
(2008)
RNA
, vol.14
, pp. 685-695
-
-
Meyer, M.M.1
Roth, A.2
Chervin, S.M.3
Garcia, G.A.4
Breaker, R.R.5
-
23
-
-
23144463910
-
RibEx: a web server for locating riboswitches and other conserved bacterial regulatory elements
-
Abreu-Goodger C, Merino E. RibEx: a web server for locating riboswitches and other conserved bacterial regulatory elements. Nucleic Acids Res 2005, 33:W690-W692.
-
(2005)
Nucleic Acids Res
, vol.33
-
-
Abreu-Goodger, C.1
Merino, E.2
-
24
-
-
67849122320
-
MEME SUITE: tools for motif discovery and searching
-
Bailey TL, Boden M, Buske FA, Frith M, Grant CE, Clementi L, Ren J, Li WW, Noble WS. MEME SUITE: tools for motif discovery and searching. Nucleic Acids Res 2009, 37:W202-W208.
-
(2009)
Nucleic Acids Res
, vol.37
-
-
Bailey, T.L.1
Boden, M.2
Buske, F.A.3
Frith, M.4
Grant, C.E.5
Clementi, L.6
Ren, J.7
Li, W.W.8
Noble, W.S.9
-
26
-
-
71449114713
-
Exceptional structured noncoding RNAs revealed by bacterial metagenome analysis
-
Weinberg Z, Perreault J, Meyer MM, Breaker RR. Exceptional structured noncoding RNAs revealed by bacterial metagenome analysis. Nature 2009, 462:656-659.
-
(2009)
Nature
, vol.462
, pp. 656-659
-
-
Weinberg, Z.1
Perreault, J.2
Meyer, M.M.3
Breaker, R.R.4
-
27
-
-
79958251726
-
Identification of CRISPR and riboswitch related RNAs among novel noncoding RNAs of the euryarchaeon Pyrococcus abyssi
-
Phok K, Moisan A, Rinaldi D, Brucato N, Carpousis AJ, Gaspin C, Clouet-d'Orval B. Identification of CRISPR and riboswitch related RNAs among novel noncoding RNAs of the euryarchaeon Pyrococcus abyssi. BMC Genomics 2011, 12:312.
-
(2011)
BMC Genomics
, vol.12
, pp. 312
-
-
Phok, K.1
Moisan, A.2
Rinaldi, D.3
Brucato, N.4
Carpousis, A.J.5
Gaspin, C.6
Clouet-d'Orval, B.7
-
28
-
-
81855205059
-
ADAR proteins: double-stranded RNA and Z-DNA binding domains
-
Barraud P, Allain FH-T. ADAR proteins: double-stranded RNA and Z-DNA binding domains. Curr Top Microbiol Immunol 2012, 353:35-60.
-
(2012)
Curr Top Microbiol Immunol
, vol.353
, pp. 35-60
-
-
Barraud, P.1
Allain, F.-T.2
-
29
-
-
77951922861
-
Molecular diversity through RNA editing: a balancing act
-
Farajollahi S, Maas S. Molecular diversity through RNA editing: a balancing act. Trends Genet 2010, 26:221-230.
-
(2010)
Trends Genet
, vol.26
, pp. 221-230
-
-
Farajollahi, S.1
Maas, S.2
-
30
-
-
33646759917
-
A-to-I RNA editing and human disease
-
Maas S, Kawahara Y, Tamburro KM, Nishikura K. A-to-I RNA editing and human disease. RNA Biol 2006, 3:1-9.
-
(2006)
RNA Biol
, vol.3
, pp. 1-9
-
-
Maas, S.1
Kawahara, Y.2
Tamburro, K.M.3
Nishikura, K.4
-
31
-
-
33344477023
-
ADAR2-dependent RNA editing of AMPA receptor subunit GluR2 determines vulnerability of neurons in forebrain ischemia
-
Peng PL, Zhong X, Tu W, Soundarapandian MM, Molner P, Zhu D, Lau L, Liu S, Liu F, Lu Y. ADAR2-dependent RNA editing of AMPA receptor subunit GluR2 determines vulnerability of neurons in forebrain ischemia. Neuron 2006, 49:719-733.
-
(2006)
Neuron
, vol.49
, pp. 719-733
-
-
Peng, P.L.1
Zhong, X.2
Tu, W.3
Soundarapandian, M.M.4
Molner, P.5
Zhu, D.6
Lau, L.7
Liu, S.8
Liu, F.9
Lu, Y.10
-
32
-
-
0345133268
-
Modulation of RNA editing by functional nucleolar sequestration of ADAR2
-
Sansam CL, Wells KS, Emeson RB. Modulation of RNA editing by functional nucleolar sequestration of ADAR2. Proc Natl Acad Sci U S A 2003, 100:14018-14023.
-
(2003)
Proc Natl Acad Sci U S A
, vol.100
, pp. 14018-14023
-
-
Sansam, C.L.1
Wells, K.S.2
Emeson, R.B.3
-
33
-
-
73049104019
-
Identification of a selective nuclear import signal in adenosine deaminases acting on RNA
-
Nucleic Acids Res
-
Maas S, Gommans WM. Identification of a selective nuclear import signal in adenosine deaminases acting on RNA. Nucleic Acids Res 2009, 37:5822-5829.
-
(2009)
, vol.37
, pp. 5822-5829
-
-
Maas, S.1
Gommans, W.M.2
-
34
-
-
0033529064
-
Regulation of alternative splicing by RNA editing
-
Rueter SM, Dawson TR, Emeson RB. Regulation of alternative splicing by RNA editing. Nature 1999, 399:75-80.
-
(1999)
Nature
, vol.399
, pp. 75-80
-
-
Rueter, S.M.1
Dawson, T.R.2
Emeson, R.B.3
-
35
-
-
0033943052
-
dADAR, a Drosophila double-stranded RNA-specific adenosine deaminase is highly developmentally regulated and is itself a target for RNA editing
-
Palladino MJ, Keegan LP, O'Connell MA, Reenan RA. dADAR, a Drosophila double-stranded RNA-specific adenosine deaminase is highly developmentally regulated and is itself a target for RNA editing. RNA 2000, 6:1004-1018.
-
(2000)
RNA
, vol.6
, pp. 1004-1018
-
-
Palladino, M.J.1
Keegan, L.P.2
O'Connell, M.A.3
Reenan, R.A.4
-
36
-
-
34447542355
-
RNA binding-independent dimerization of adenosine deaminases acting on RNA and dominant negative effects of nonfunctional subunits on dimer functions
-
Valente L, Nishikura K. RNA binding-independent dimerization of adenosine deaminases acting on RNA and dominant negative effects of nonfunctional subunits on dimer functions. J Biol Chem 2007, 282:16054-16061.
-
(2007)
J Biol Chem
, vol.282
, pp. 16054-16061
-
-
Valente, L.1
Nishikura, K.2
-
37
-
-
17844384227
-
Regulation of serotonin 2C receptor pre-mRNA editing by serotonin A2
-
Schmauss C. Regulation of serotonin 2C receptor pre-mRNA editing by serotonin A2. Int Rev Neurobiol 2005, 63:83-100.
-
(2005)
Int Rev Neurobiol
, vol.63
, pp. 83-100
-
-
Schmauss, C.1
-
38
-
-
24644519954
-
Inositol hexakisphosphate is bound in the ADAR2 core and required for RNA editing
-
Macbeth MR, Schubert HL, Vandemark AP, Lingam AT, Hill CP, Bass BL. Inositol hexakisphosphate is bound in the ADAR2 core and required for RNA editing. Science 2005, 309:1534-1539.
-
(2005)
Science
, vol.309
, pp. 1534-1539
-
-
Macbeth, M.R.1
Schubert, H.L.2
Vandemark, A.P.3
Lingam, A.T.4
Hill, C.P.5
Bass, B.L.6
-
40
-
-
77955273674
-
The REM phase of gene regulation
-
Hentze MW, Preiss T. The REM phase of gene regulation. Trends Biochem Sci 2010, 35:423-426.
-
(2010)
Trends Biochem Sci
, vol.35
, pp. 423-426
-
-
Hentze, M.W.1
Preiss, T.2
-
41
-
-
0029758487
-
Molecular control of vertebrate iron metabolism: mRNA-based regulatory circuits operated by iron, nitric oxide, and oxidative stress
-
Hentze MW, Kühn LC. Molecular control of vertebrate iron metabolism: mRNA-based regulatory circuits operated by iron, nitric oxide, and oxidative stress. Proc Natl Acad Sci U S A 1996, 93:8175-8182.
-
(1996)
Proc Natl Acad Sci U S A
, vol.93
, pp. 8175-8182
-
-
Hentze, M.W.1
Kühn, L.C.2
-
42
-
-
0033826764
-
Iron regulatory proteins and the molecular control of mammalian iron metabolism
-
Eisenstein RS. Iron regulatory proteins and the molecular control of mammalian iron metabolism. Annu Rev Nutr 2000, 20:627-662.
-
(2000)
Annu Rev Nutr
, vol.20
, pp. 627-662
-
-
Eisenstein, R.S.1
-
44
-
-
0034731457
-
Combinatorial mRNA regulation: iron regulatory proteins and iso-iron-responsive elements (Iso-IREs)
-
Theil EC, Eisenstein RS. Combinatorial mRNA regulation: iron regulatory proteins and iso-iron-responsive elements (Iso-IREs). J Biol Chem 2000, 275:40659-40662.
-
(2000)
J Biol Chem
, vol.275
, pp. 40659-40662
-
-
Theil, E.C.1
Eisenstein, R.S.2
-
45
-
-
0027452550
-
Regulating the fate of mRNA: the control of cellular iron metabolism
-
Klausner RD, Rouault TA, Harford JB. Regulating the fate of mRNA: the control of cellular iron metabolism. Cell 1993, 72:19-28.
-
(1993)
Cell
, vol.72
, pp. 19-28
-
-
Klausner, R.D.1
Rouault, T.A.2
Harford, J.B.3
-
46
-
-
0642349271
-
Post-transcriptional regulation of human iron metabolism by iron regulatory proteins
-
Rouault TA. Post-transcriptional regulation of human iron metabolism by iron regulatory proteins. Blood Cells Mol Dis 2002, 29:309-314.
-
(2002)
Blood Cells Mol Dis
, vol.29
, pp. 309-314
-
-
Rouault, T.A.1
-
47
-
-
0037096190
-
The iron regulatory proteins: targets and modulators of free radical reactions and oxidative damage
-
Cairo G, Recalcati S, Pietrangelo A, Minotti G. The iron regulatory proteins: targets and modulators of free radical reactions and oxidative damage. Free Radic Biol Med 2002, 32:1237-1243.
-
(2002)
Free Radic Biol Med
, vol.32
, pp. 1237-1243
-
-
Cairo, G.1
Recalcati, S.2
Pietrangelo, A.3
Minotti, G.4
-
48
-
-
0027479724
-
A double life: cytosolic aconitase as a regulatory RNA binding protein
-
Klausner RD, Rouault TA. A double life: cytosolic aconitase as a regulatory RNA binding protein. Mol Biol Cell 1993, 4:1-5.
-
(1993)
Mol Biol Cell
, vol.4
, pp. 1-5
-
-
Klausner, R.D.1
Rouault, T.A.2
-
49
-
-
0024439456
-
The iron-responsive element binding protein: a method for the affinity purification of a regulatory RNA-binding protein
-
Rouault TA, Hentze MW, Haile DJ, Harford JB, Klausner RD. The iron-responsive element binding protein: a method for the affinity purification of a regulatory RNA-binding protein. Proc Natl Acad Sci U S A 1989, 86:5768-5772.
-
(1989)
Proc Natl Acad Sci U S A
, vol.86
, pp. 5768-5772
-
-
Rouault, T.A.1
Hentze, M.W.2
Haile, D.J.3
Harford, J.B.4
Klausner, R.D.5
-
50
-
-
0025099393
-
A high yield affinity purification method for specific RNA-binding proteins: isolation of the iron regulatory factor from human placenta
-
Neupert B, Thompson NA, Meyer C, Kühn LC. A high yield affinity purification method for specific RNA-binding proteins: isolation of the iron regulatory factor from human placenta. Nucleic Acids Res 1990, 18:51-55.
-
(1990)
Nucleic Acids Res
, vol.18
, pp. 51-55
-
-
Neupert, B.1
Thompson, N.A.2
Meyer, C.3
Kühn, L.C.4
-
51
-
-
0025009117
-
Cloning of the cDNA encoding an RNA regulatory protein-the human iron-responsive element-binding protein
-
Rouault TA, Tang CK, Kaptain S, Burgess WH, Haile DJ, Samaniego F, McBride OW, Harford JB, Klausner RD. Cloning of the cDNA encoding an RNA regulatory protein-the human iron-responsive element-binding protein. Proc Natl Acad Sci U S A 1990, 87:7958-7962.
-
(1990)
Proc Natl Acad Sci U S A
, vol.87
, pp. 7958-7962
-
-
Rouault, T.A.1
Tang, C.K.2
Kaptain, S.3
Burgess, W.H.4
Haile, D.J.5
Samaniego, F.6
McBride, O.W.7
Harford, J.B.8
Klausner, R.D.9
-
52
-
-
0026508809
-
Expression of active iron regulatory factor from a full-length human cDNA by in vitro transcription/translation
-
Hirling H, Emery-Goodman A, Thompson N, Neupert B, Seiser C, Kühn LC. Expression of active iron regulatory factor from a full-length human cDNA by in vitro transcription/translation. Nucleic Acids Res 1992, 20:33-39.
-
(1992)
Nucleic Acids Res
, vol.20
, pp. 33-39
-
-
Hirling, H.1
Emery-Goodman, A.2
Thompson, N.3
Neupert, B.4
Seiser, C.5
Kühn, L.C.6
-
53
-
-
0025865421
-
Homology between IRE-BP, a regulatory RNA-binding protein, aconitase, and isopropylmalate isomerase
-
Hentze MW, Argos P. Homology between IRE-BP, a regulatory RNA-binding protein, aconitase, and isopropylmalate isomerase. Nucleic Acids Res 1991, 19:1739-1740.
-
(1991)
Nucleic Acids Res
, vol.19
, pp. 1739-1740
-
-
Hentze, M.W.1
Argos, P.2
-
54
-
-
0026062191
-
Structural relationship between an iron-regulated RNA-binding protein (IRE-BP) and aconitase: functional implications
-
Rouault TA, Stout CD, Kaptain S, Harford JB, Klausner RD. Structural relationship between an iron-regulated RNA-binding protein (IRE-BP) and aconitase: functional implications. Cell 1991, 64:881-883.
-
(1991)
Cell
, vol.64
, pp. 881-883
-
-
Rouault, T.A.1
Stout, C.D.2
Kaptain, S.3
Harford, J.B.4
Klausner, R.D.5
-
55
-
-
0025748777
-
A regulated RNA binding protein also possesses aconitase activity
-
Kaptain S, Downey WE, Tang C, Philpott C, Haile D, Orloff DG, Harford JB, Rouault TA, Klausner RD. A regulated RNA binding protein also possesses aconitase activity. Proc Natl Acad Sci U S A 1991, 88:10109-10113.
-
(1991)
Proc Natl Acad Sci U S A
, vol.88
, pp. 10109-10113
-
-
Kaptain, S.1
Downey, W.E.2
Tang, C.3
Philpott, C.4
Haile, D.5
Orloff, D.G.6
Harford, J.B.7
Rouault, T.A.8
Klausner, R.D.9
-
56
-
-
0026756095
-
Reciprocal control of RNA-binding and aconitase activity in the regulation of the iron-responsive element binding protein: role of the iron-sulfur cluster
-
Haile DJ, Rouault TA, Tang CK, Chin J, Harford JB, Klausner RD. Reciprocal control of RNA-binding and aconitase activity in the regulation of the iron-responsive element binding protein: role of the iron-sulfur cluster. Proc Natl Acad Sci U S A 1992, 89:7536-7540.
-
(1992)
Proc Natl Acad Sci U S A
, vol.89
, pp. 7536-7540
-
-
Haile, D.J.1
Rouault, T.A.2
Tang, C.K.3
Chin, J.4
Harford, J.B.5
Klausner, R.D.6
-
57
-
-
0027081042
-
Purification and characterization of cytosolic aconitase from beef liver and its relationship to the iron-responsive element binding protein
-
Kennedy MC, Mende-Mueller L, Blondin GA, Beinert H. Purification and characterization of cytosolic aconitase from beef liver and its relationship to the iron-responsive element binding protein. Proc Natl Acad Sci U S A 1992, 89:11730-11734.
-
(1992)
Proc Natl Acad Sci U S A
, vol.89
, pp. 11730-11734
-
-
Kennedy, M.C.1
Mende-Mueller, L.2
Blondin, G.A.3
Beinert, H.4
-
58
-
-
33644804529
-
Crystal structure of human iron regulatory protein 1 as cytosolic aconitase
-
Dupuy J, Volbeda A, Carpentier P, Darnault C, Moulis J-M, Fontecilla-Camps JC. Crystal structure of human iron regulatory protein 1 as cytosolic aconitase. Structure 2006, 14:129-139.
-
(2006)
Structure
, vol.14
, pp. 129-139
-
-
Dupuy, J.1
Volbeda, A.2
Carpentier, P.3
Darnault, C.4
Moulis, J.-M.5
Fontecilla-Camps, J.C.6
-
59
-
-
33845865301
-
Structure of dual function iron regulatory protein 1 complexed with ferritin IRE-RNA
-
Walden WE, Selezneva AI, Dupuy J, Volbeda A, Fontecilla-Camps JC, Theil EC, Volz K. Structure of dual function iron regulatory protein 1 complexed with ferritin IRE-RNA. Science 2006, 314:1903-1908.
-
(2006)
Science
, vol.314
, pp. 1903-1908
-
-
Walden, W.E.1
Selezneva, A.I.2
Dupuy, J.3
Volbeda, A.4
Fontecilla-Camps, J.C.5
Theil, E.C.6
Volz, K.7
-
60
-
-
0028321733
-
Optimal sequence and structure of iron-responsive elements. Selection of RNA stem-loops with high affinity for iron regulatory factor
-
Henderson BR, Menotti E, Bonnard C, Kühn LC. Optimal sequence and structure of iron-responsive elements. Selection of RNA stem-loops with high affinity for iron regulatory factor. J Biol Chem 1994, 269:17481-17489.
-
(1994)
J Biol Chem
, vol.269
, pp. 17481-17489
-
-
Henderson, B.R.1
Menotti, E.2
Bonnard, C.3
Kühn, L.C.4
-
61
-
-
0029913831
-
Differences in the RNA binding sites of iron regulatory proteins and potential target diversity
-
Butt J, Kim HY, Basilion JP, Cohen S, Iwai K, Philpott CC, Altschul S, Klausner RD, Rouault TA. Differences in the RNA binding sites of iron regulatory proteins and potential target diversity. Proc Natl Acad Sci U S A 1996, 93:4345-4349.
-
(1996)
Proc Natl Acad Sci U S A
, vol.93
, pp. 4345-4349
-
-
Butt, J.1
Kim, H.Y.2
Basilion, J.P.3
Cohen, S.4
Iwai, K.5
Philpott, C.C.6
Altschul, S.7
Klausner, R.D.8
Rouault, T.A.9
-
62
-
-
10744223491
-
Genetic ablations of iron regulatory proteins 1 and 2 reveal why iron regulatory protein 2 dominates iron homeostasis
-
Meyron-Holtz EG, Ghosh MC, Iwai K, LaVaute T, Brazzolotto X, Berger UV, Land W, Ollivierre-Wilson H, Grinberg A, Love P, et al. Genetic ablations of iron regulatory proteins 1 and 2 reveal why iron regulatory protein 2 dominates iron homeostasis. EMBO J 2004, 23:386-395.
-
(2004)
EMBO J
, vol.23
, pp. 386-395
-
-
Meyron-Holtz, E.G.1
Ghosh, M.C.2
Iwai, K.3
LaVaute, T.4
Brazzolotto, X.5
Berger, U.V.6
Land, W.7
Ollivierre-Wilson, H.8
Grinberg, A.9
Love, P.10
-
63
-
-
0035138456
-
Targeted deletion of the gene encoding iron regulatory protein-2 causes misregulation of iron metabolism and neurodegenerative disease in mice
-
LaVaute T, Smith S, Cooperman S, Iwai K, Land W, Meyron-Holtz E, Drake SK, Miller G, Abu-Asab M, Tsokos M, et al. Targeted deletion of the gene encoding iron regulatory protein-2 causes misregulation of iron metabolism and neurodegenerative disease in mice. Nat Genet 2001, 27:209-214.
-
(2001)
Nat Genet
, vol.27
, pp. 209-214
-
-
LaVaute, T.1
Smith, S.2
Cooperman, S.3
Iwai, K.4
Land, W.5
Meyron-Holtz, E.6
Drake, S.K.7
Miller, G.8
Abu-Asab, M.9
Tsokos, M.10
-
64
-
-
23044503950
-
Microcytic anemia, erythropoietic protoporphyria, and neurodegeneration in mice with targeted deletion of iron-regulatory protein 2
-
Cooperman SS, Meyron-Holtz EG, Olivierre-Wilson H, Ghosh MC, McConnell JP, Rouault TA. Microcytic anemia, erythropoietic protoporphyria, and neurodegeneration in mice with targeted deletion of iron-regulatory protein 2. Blood 2005, 106:1084-1091.
-
(2005)
Blood
, vol.106
, pp. 1084-1091
-
-
Cooperman, S.S.1
Meyron-Holtz, E.G.2
Olivierre-Wilson, H.3
Ghosh, M.C.4
McConnell, J.P.5
Rouault, T.A.6
-
65
-
-
33645307993
-
Complete loss of iron regulatory proteins 1 and 2 prevents viability of murine zygotes beyond the blastocyst stage of embryonic development
-
Smith SR, Ghosh MC, Ollivierre-Wilson H, Hang Tong W, Rouault TA. Complete loss of iron regulatory proteins 1 and 2 prevents viability of murine zygotes beyond the blastocyst stage of embryonic development. Blood Cells Mol Dis 2006, 36:283-287.
-
(2006)
Blood Cells Mol Dis
, vol.36
, pp. 283-287
-
-
Smith, S.R.1
Ghosh, M.C.2
Ollivierre-Wilson, H.3
Hang Tong, W.4
Rouault, T.A.5
-
66
-
-
0032973950
-
New insights into an old protein: the functional diversity of mammalian glyceraldehyde-3-phosphate dehydrogenase
-
Sirover MA. New insights into an old protein: the functional diversity of mammalian glyceraldehyde-3-phosphate dehydrogenase. Biochim Biophys Acta 1999, 1432:159-184.
-
(1999)
Biochim Biophys Acta
, vol.1432
, pp. 159-184
-
-
Sirover, M.A.1
-
68
-
-
0022406559
-
Glyceraldehyde-3-phosphate dehydrogenase is one of the three major RNA-binding proteins of rabbit reticulocytes
-
Ryazanov AG. Glyceraldehyde-3-phosphate dehydrogenase is one of the three major RNA-binding proteins of rabbit reticulocytes. FEBS Lett 1985, 192:131-134.
-
(1985)
FEBS Lett
, vol.192
, pp. 131-134
-
-
Ryazanov, A.G.1
-
69
-
-
0027518424
-
Sequence-specific binding of transfer RNA by glyceraldehyde-3-phosphate dehydrogenase
-
Singh R, Green MR. Sequence-specific binding of transfer RNA by glyceraldehyde-3-phosphate dehydrogenase. Science 1993, 259:365-368.
-
(1993)
Science
, vol.259
, pp. 365-368
-
-
Singh, R.1
Green, M.R.2
-
70
-
-
0037316278
-
Interaction of glyceraldehyde-3-phosphate dehydrogenase with secondary and tertiary RNA structural elements of the hepatitis A virus 3′ translated and non-translated regions
-
Dollenmaier G. Interaction of glyceraldehyde-3-phosphate dehydrogenase with secondary and tertiary RNA structural elements of the hepatitis A virus 3′ translated and non-translated regions. J Gen Virol 2003, 84:403-414.
-
(2003)
J Gen Virol
, vol.84
, pp. 403-414
-
-
Dollenmaier, G.1
-
71
-
-
0028816615
-
Glyceraldehyde-3-phosphate dehydrogenase selectively binds AU-rich RNA in the NAD(+)-binding region (Rossmann fold)
-
Nagy E, Rigby WF. Glyceraldehyde-3-phosphate dehydrogenase selectively binds AU-rich RNA in the NAD(+)-binding region (Rossmann fold). J Biol Chem 1995, 270:2755-2763.
-
(1995)
J Biol Chem
, vol.270
, pp. 2755-2763
-
-
Nagy, E.1
Rigby, W.F.2
-
72
-
-
0035911221
-
Colony-stimulating factor 1 promotes progression of mammary tumors to malignancy
-
Lin EY, Nguyen AV, Russell RG, Pollard JW. Colony-stimulating factor 1 promotes progression of mammary tumors to malignancy. J Exp Med 2001, 193:727-740.
-
(2001)
J Exp Med
, vol.193
, pp. 727-740
-
-
Lin, E.Y.1
Nguyen, A.V.2
Russell, R.G.3
Pollard, J.W.4
-
73
-
-
57349120623
-
Glyceraldehyde-3-phosphate dehydrogenase regulates endothelin-1 expression by a novel, redox-sensitive mechanism involving mRNA stability
-
Rodríguez-Pascual F, Redondo-Horcajo M, Magán-Marchal N, Lagares D, Martínez-Ruiz A, Kleinert H, Lamas S. Glyceraldehyde-3-phosphate dehydrogenase regulates endothelin-1 expression by a novel, redox-sensitive mechanism involving mRNA stability. Mol Cell Biol 2008, 28:7139-7155.
-
(2008)
Mol Cell Biol
, vol.28
, pp. 7139-7155
-
-
Rodríguez-Pascual, F.1
Redondo-Horcajo, M.2
Magán-Marchal, N.3
Lagares, D.4
Martínez-Ruiz, A.5
Kleinert, H.6
Lamas, S.7
-
74
-
-
0034726714
-
Identification of the NAD(+)-binding fold of glyceraldehyde-3-phosphate dehydrogenase as a novel RNA-binding domain
-
Nagy E, Henics T, Eckert M, Miseta A, Lightowlers RN, Kellermayer M. Identification of the NAD(+)-binding fold of glyceraldehyde-3-phosphate dehydrogenase as a novel RNA-binding domain. Biochem Biophys Res Commun 2000, 275:253-260.
-
(2000)
Biochem Biophys Res Commun
, vol.275
, pp. 253-260
-
-
Nagy, E.1
Henics, T.2
Eckert, M.3
Miseta, A.4
Lightowlers, R.N.5
Kellermayer, M.6
-
75
-
-
0043173644
-
Oxidation of glyceraldehyde-3-phosphate dehydrogenase enhances its binding to nucleic acids
-
Arutyunova EI, Danshina PV, Domnina LV, Pleten AP, Muronetz VI. Oxidation of glyceraldehyde-3-phosphate dehydrogenase enhances its binding to nucleic acids. Biochem Biophys Res Commun 2003, 307:547-552.
-
(2003)
Biochem Biophys Res Commun
, vol.307
, pp. 547-552
-
-
Arutyunova, E.I.1
Danshina, P.V.2
Domnina, L.V.3
Pleten, A.P.4
Muronetz, V.I.5
-
76
-
-
33645220015
-
Metabolic enzymes that bind RNA: yet another level of cellular regulatory network?
-
Cieśla J. Metabolic enzymes that bind RNA: yet another level of cellular regulatory network? Acta Biochim Pol 2006, 53:11-32.
-
(2006)
Acta Biochim Pol
, vol.53
, pp. 11-32
-
-
Cieśla, J.1
-
77
-
-
56549105330
-
HITS-CLIP yields genome-wide insights into brain alternative RNA processing
-
Licatalosi DD, Mele A, Fak JJ, Ule J, Kayikci M, Chi SW, Clark TA, Schweitzer AC, Blume JE, Wang X, et al. HITS-CLIP yields genome-wide insights into brain alternative RNA processing. Nature 2008, 456:464-469.
-
(2008)
Nature
, vol.456
, pp. 464-469
-
-
Licatalosi, D.D.1
Mele, A.2
Fak, J.J.3
Ule, J.4
Kayikci, M.5
Chi, S.W.6
Clark, T.A.7
Schweitzer, A.C.8
Blume, J.E.9
Wang, X.10
-
78
-
-
80055101895
-
PAR-CliP-a method to identify transcriptome-wide the binding sites of RNA binding proteins
-
Hafner M, Landthaler M, Burger L, Khorshid M, Hausser J, Berninger P, Rothballer A, Ascano M, Jungkamp A-C, Munschauer M, et al. PAR-CliP-a method to identify transcriptome-wide the binding sites of RNA binding proteins. J Vis Exp 2010, 41:e2034.
-
(2010)
J Vis Exp
, vol.41
-
-
Hafner, M.1
Landthaler, M.2
Burger, L.3
Khorshid, M.4
Hausser, J.5
Berninger, P.6
Rothballer, A.7
Ascano, M.8
Jungkamp, A.-C.9
Munschauer, M.10
-
79
-
-
80455179726
-
iCLIP-transcriptome-wide mapping of protein-RNA interactions with individual nucleotide resolution
-
Konig J, Zarnack K, Rot G, Curk T, Kayikci M, Zupan B, Turner DJ, Luscombe NM, Ule J. iCLIP-transcriptome-wide mapping of protein-RNA interactions with individual nucleotide resolution. J Vis Exp 2011, 50:e2638.
-
(2011)
J Vis Exp
, vol.50
-
-
Konig, J.1
Zarnack, K.2
Rot, G.3
Curk, T.4
Kayikci, M.5
Zupan, B.6
Turner, D.J.7
Luscombe, N.M.8
Ule, J.9
-
80
-
-
84861969926
-
Insights into RNA biology from an atlas of mammalian mRNA-binding proteins
-
Castello A, Fischer B, Eichelbaum K, Horos R, Beckmann BM, Strein C, Davey NE, Humphreys DT, Preiss T, Steinmetz LM, et al. Insights into RNA biology from an atlas of mammalian mRNA-binding proteins. Cell 2012, 149:1393-1406.
-
(2012)
Cell
, vol.149
, pp. 1393-1406
-
-
Castello, A.1
Fischer, B.2
Eichelbaum, K.3
Horos, R.4
Beckmann, B.M.5
Strein, C.6
Davey, N.E.7
Humphreys, D.T.8
Preiss, T.9
Steinmetz, L.M.10
|