-
1
-
-
79958072421
-
Intrinsically disordered proteins: Regulation and disease
-
M. M. Babu, R. van der Lee, N. S. de Groot, J. Gsponer, Intrinsically disordered proteins: Regulation and disease. Curr. Opin. Struct. Biol. 21, 432-440 (2011).
-
(2011)
Curr. Opin. Struct. Biol.
, vol.21
, pp. 432-440
-
-
Babu, M.M.1
Van Der Lee, R.2
De Groot, N.S.3
Gsponer, J.4
-
2
-
-
79956322553
-
Global quantification of mammalian gene expression control
-
B. Schwanhäusser, D. Busse, N. Li, G. Dittmar, J. Schuchhardt, J. Wolf, W. Chen, M. Selbach, Global quantification of mammalian gene expression control. Nature 473, 337-342 (2011).
-
(2011)
Nature
, vol.473
, pp. 337-342
-
-
Schwanhäusser, B.1
Busse, D.2
Li, N.3
Dittmar, G.4
Schuchhardt, J.5
Wolf, J.6
Chen, W.7
Selbach, M.8
-
3
-
-
41149149041
-
The functional consequences of alternative promoter use in mammalian genomes
-
R. V. Davuluri, Y. Suzuki, S. Sugano, C. Plass, T. H. Huang, The functional consequences of alternative promoter use in mammalian genomes. Trends Genet. 24, 167-177 (2008).
-
(2008)
Trends Genet.
, vol.24
, pp. 167-177
-
-
Davuluri, R.V.1
Suzuki, Y.2
Sugano, S.3
Plass, C.4
Huang, T.H.5
-
4
-
-
12344250822
-
Function of alternative splicing
-
S. Stamm, S. Ben-Ari, I. Rafalska, Y. Tang, Z. Zhang, D. Toiber, T. A. Thanaraj, H. Soreq, Function of alternative splicing. Gene 344, 1-20 (2005).
-
(2005)
Gene
, vol.344
, pp. 1-20
-
-
Stamm, S.1
Ben-Ari, S.2
Rafalska, I.3
Tang, Y.4
Zhang, Z.5
Toiber, D.6
Thanaraj, T.A.7
Soreq, H.8
-
6
-
-
36749010218
-
The age of crosstalk: Phosphorylation, ubiquitination, and beyond
-
T. Hunter, The age of crosstalk: Phosphorylation, ubiquitination, and beyond. Mol. Cell 28, 730-738 (2007).
-
(2007)
Mol. Cell
, vol.28
, pp. 730-738
-
-
Hunter, T.1
-
7
-
-
70349308508
-
Cell regulation: Determined to signal discrete cooperation
-
T. J. Gibson, Cell regulation: Determined to signal discrete cooperation. Trends Biochem. Sci. 34, 471-482 (2009).
-
(2009)
Trends Biochem. Sci.
, vol.34
, pp. 471-482
-
-
Gibson, T.J.1
-
8
-
-
78649630513
-
Regulated protein kinases and phosphatases in cell cycle decisions
-
B. Novak, O. Kapuy, M. R. Domingo-Sananes, J. J. Tyson, Regulated protein kinases and phosphatases in cell cycle decisions. Curr. Opin. Cell Biol. 22, 801-808 (2010).
-
(2010)
Curr. Opin. Cell Biol.
, vol.22
, pp. 801-808
-
-
Novak, B.1
Kapuy, O.2
Domingo-Sananes, M.R.3
Tyson, J.J.4
-
10
-
-
0032749078
-
Intrinsically unstructured proteins: Re-assessing the protein structure-function paradigm
-
P. E. Wright, H. J. Dyson, Intrinsically unstructured proteins: Re-assessing the protein structure-function paradigm. J. Mol. Biol. 293, 321-331 (1999).
-
(1999)
J. Mol. Biol.
, vol.293
, pp. 321-331
-
-
Wright, P.E.1
Dyson, H.J.2
-
11
-
-
47649102449
-
Regulation of cell division by intrinsically unstructured proteins: Intrinsic flexibility, modularity, and signaling conduits
-
C. A. Galea, Y. Wang, S. G. Sivakolundu, R. W. Kriwacki, Regulation of cell division by intrinsically unstructured proteins: Intrinsic flexibility, modularity, and signaling conduits. Biochemistry 47, 7598-7609 (2008).
-
(2008)
Biochemistry
, vol.47
, pp. 7598-7609
-
-
Galea, C.A.1
Wang, Y.2
Sivakolundu, S.G.3
Kriwacki, R.W.4
-
12
-
-
52249085709
-
The unfoldomics decade: An update on intrinsically disordered proteins
-
A. K. Dunker, C. J. Oldfield, J. Meng, P. Romero, J. Y. Yang, J. W. Chen, V. Vacic, Z. Obradovic, V. N. Uversky, The unfoldomics decade: An update on intrinsically disordered proteins. BMC Genomics 9 (Suppl. 2), S1 (2008).
-
(2008)
BMC Genomics
, vol.9
, Issue.SUPPL. 2
-
-
Dunker, A.K.1
Oldfield, C.J.2
Meng, J.3
Romero, P.4
Yang, J.Y.5
Chen, J.W.6
Vacic, V.7
Obradovic, Z.8
Uversky, V.N.9
-
14
-
-
77953953091
-
Signal integration through blending, bolstering and bifurcating of intracellular information
-
C. T. Pawson, J. D. Scott, Signal integration through blending, bolstering and bifurcating of intracellular information. Nat. Struct. Mol. Biol. 17, 653-658 (2010).
-
(2010)
Nat. Struct. Mol. Biol.
, vol.17
, pp. 653-658
-
-
Pawson, C.T.1
Scott, J.D.2
-
16
-
-
84864616734
-
Beyond 'furballs' And 'dumpling Soups'- Towards a molecular architecture of signaling complexes and networks
-
M. Lewitzky, P. C. Simister, S. M. Feller, Beyond 'furballs' and 'dumpling soups' - Towards a molecular architecture of signaling complexes and networks. FEBS Lett. 586, 2740-2750 (2012).
-
(2012)
FEBS Lett.
, vol.586
, pp. 2740-2750
-
-
Lewitzky, M.1
Simister, P.C.2
Feller, S.M.3
-
17
-
-
2342473198
-
The importance of intrinsic disorder for protein phosphorylation
-
L. M. Iakoucheva, P. Radivojac, C. J. Brown, T. R. O'Connor, J. G. Sikes, Z. Obradovic, A. K. Dunker, The importance of intrinsic disorder for protein phosphorylation. Nucleic Acids Res. 32, 1037-1049 (2004).
-
(2004)
Nucleic Acids Res.
, vol.32
, pp. 1037-1049
-
-
Iakoucheva, L.M.1
Radivojac, P.2
Brown, C.J.3
O'Connor, T.R.4
Sikes, J.G.5
Obradovic, Z.6
Dunker, A.K.7
-
18
-
-
33847783298
-
Functional anthology of intrinsic disorder. 3. Ligands, post-translational modifications, and diseases associated with intrinsically disordered proteins
-
H. Xie, S. Vucetic, L. M. Iakoucheva, C. J. Oldfield, A. K. Dunker, Z. Obradovic, V. N. Uversky, Functional anthology of intrinsic disorder. 3. Ligands, post-translational modifications, and diseases associated with intrinsically disordered proteins. J. Proteome Res. 6, 1917-1932 (2007).
-
(2007)
J. Proteome Res.
, vol.6
, pp. 1917-1932
-
-
Xie, H.1
Vucetic, S.2
Iakoucheva, L.M.3
Oldfield, C.J.4
Dunker, A.K.5
Obradovic, Z.6
Uversky, V.N.7
-
19
-
-
47849089500
-
Phosphoproteomic analysis of the mouse brain cytosol reveals a predominance of protein phosphorylation in regions of intrinsic sequence disorder
-
M. O. Collins, L. Yu, I. Campuzano, S. G. Grant, J. S. Choudhary, Phosphoproteomic analysis of the mouse brain cytosol reveals a predominance of protein phosphorylation in regions of intrinsic sequence disorder. Mol. Cell. Proteomics 7, 1331-1348 (2008).
-
(2008)
Mol. Cell. Proteomics
, vol.7
, pp. 1331-1348
-
-
Collins, M.O.1
Yu, L.2
Campuzano, I.3
Grant, S.G.4
Choudhary, J.S.5
-
20
-
-
49549122501
-
Understanding eukaryotic linear motifs and their role in cell signaling and regulation
-
F. Diella, N. Haslam, C. Chica, A. Budd, S. Michael, N. P. Brown, G. Trave, T. J. Gibson, Understanding eukaryotic linear motifs and their role in cell signaling and regulation. Front. Biosci. 13, 6580-6603 (2008).
-
(2008)
Front. Biosci.
, vol.13
, pp. 6580-6603
-
-
Diella, F.1
Haslam, N.2
Chica, C.3
Budd, A.4
Michael, S.5
Brown, N.P.6
Trave, G.7
Gibson, T.J.8
-
21
-
-
20444414545
-
Linear motifs: Evolutionary interaction switches
-
V. Neduva, R. B. Russell, Linear motifs: Evolutionary interaction switches. FEBS Lett. 579, 3342-3345 (2005).
-
(2005)
FEBS Lett.
, vol.579
, pp. 3342-3345
-
-
Neduva, V.1
Russell, R.B.2
-
22
-
-
82655175482
-
Attributes of short linear motifs
-
N. E. Davey, K. Van Roey, R. J. Weatheritt, G. Toedt, B. Uyar, B. Altenberg, A. Budd, F. Diella, H. Dinkel, T. J. Gibson, Attributes of short linear motifs. Mol. Biosyst. 8, 268-281 (2012).
-
(2012)
Mol. Biosyst.
, vol.8
, pp. 268-281
-
-
Davey, N.E.1
Van Roey, K.2
Weatheritt, R.J.3
Toedt, G.4
Uyar, B.5
Altenberg, B.6
Budd, A.7
Diella, F.8
Dinkel, H.9
Gibson, T.J.10
-
23
-
-
84857495338
-
A dynamic view of domain-motif interactions
-
E. Akiva, G. Friedlander, Z. Itzhaki, H. Margalit, A dynamic view of domain-motif interactions. PLoS Comput. Biol. 8, e1002341 (2012).
-
(2012)
PLoS Comput. Biol.
, vol.8
-
-
Akiva, E.1
Friedlander, G.2
Itzhaki, Z.3
Margalit, H.4
-
24
-
-
84863928687
-
Linear motifs confer functional diversity onto splice variants
-
R. J. Weatheritt, N. E. Davey, T. J. Gibson, Linear motifs confer functional diversity onto splice variants. Nucleic Acids Res. 40, 7123-7131 (2012).
-
(2012)
Nucleic Acids Res.
, vol.40
, pp. 7123-7131
-
-
Weatheritt, R.J.1
Davey, N.E.2
Gibson, T.J.3
-
25
-
-
84862992463
-
Tissue-specific splicing of disordered segments that embed binding motifs rewires protein interaction networks
-
M. Buljan, G. Chalancon, S. Eustermann, G. P. Wagner, M. Fuxreiter, A. Bateman, M. M. Babu, Tissue-specific splicing of disordered segments that embed binding motifs rewires protein interaction networks. Mol. Cell 46, 871-883 (2012).
-
(2012)
Mol. Cell
, vol.46
, pp. 871-883
-
-
Buljan, M.1
Chalancon, G.2
Eustermann, S.3
Wagner, G.P.4
Fuxreiter, M.5
Bateman, A.6
Babu, M.M.7
-
26
-
-
84863657451
-
Rewiring the dynamic interactome
-
M. J. Davis, C. J. Shin, N. Jing, M. A. Ragan, Rewiring the dynamic interactome. Mol. Biosyst. 8, 2054-2066 (2012).
-
(2012)
Mol. Biosyst.
, vol.8
, pp. 2054-2066
-
-
Davis, M.J.1
Shin, C.J.2
Jing, N.3
Ragan, M.A.4
-
27
-
-
84863003268
-
Tissue-specific alternative splicing remodels protein-protein interaction networks
-
J. D. Ellis, M. Barrios-Rodiles, R. Colak, M. Irimia, T. Kim, J. A. Calarco, X.Wang, Q. Pan, D. O'Hanlon, P. M. Kim, J. L. Wrana, B. J. Blencowe, Tissue-specific alternative splicing remodels protein-protein interaction networks. Mol. Cell 46, 884-892 (2012).
-
(2012)
Mol. Cell
, vol.46
, pp. 884-892
-
-
Ellis, J.D.1
Barrios-Rodiles, M.2
Colak, R.3
Irimia, M.4
Kim, T.5
Calarco, J.A.6
Wang, X.7
Pan, Q.8
O'Hanlon, D.9
Kim, P.M.10
Wrana, J.L.11
Blencowe, B.J.12
-
28
-
-
4444272979
-
Cell signalling and the control of pre-mRNA splicing
-
C. Shin, J. L. Manley, Cell signalling and the control of pre-mRNA splicing. Nat. Rev. Mol. Cell Biol. 5, 727-738 (2004).
-
(2004)
Nat. Rev. Mol. Cell Biol.
, vol.5
, pp. 727-738
-
-
Shin, C.1
Manley, J.L.2
-
29
-
-
0037138365
-
Interaction domains: From simple binding events to complex cellular behavior
-
T. Pawson, M. Raina, P. Nash, Interaction domains: From simple binding events to complex cellular behavior. FEBS Lett. 513, 2-10 (2002).
-
(2002)
FEBS Lett.
, vol.513
, pp. 2-10
-
-
Pawson, T.1
Raina, M.2
Nash, P.3
-
30
-
-
33745813187
-
Reading protein modifications with interaction domains
-
B. T. Seet, I. Dikic, M. M. Zhou, T. Pawson, Reading protein modifications with interaction domains. Nat. Rev. Mol. Cell Biol. 7, 473-483 (2006).
-
(2006)
Nat. Rev. Mol. Cell Biol.
, vol.7
, pp. 473-483
-
-
Seet, B.T.1
Dikic, I.2
Zhou, M.M.3
Pawson, T.4
-
31
-
-
77953292595
-
Post-translational modifications in signal integration
-
Y. L. Deribe, T. Pawson, I. Dikic, Post-translational modifications in signal integration. Nat. Struct. Mol. Biol. 17, 666-672 (2010).
-
(2010)
Nat. Struct. Mol. Biol.
, vol.17
, pp. 666-672
-
-
Deribe, Y.L.1
Pawson, T.2
Dikic, I.3
-
32
-
-
78049274795
-
Timing control in regulatory networks by multisite protein modifications
-
C. Salazar, A. Brümmer, L. Alberghina, T. Höfer, Timing control in regulatory networks by multisite protein modifications. Trends Cell Biol. 20, 634-641 (2010).
-
(2010)
Trends Cell Biol.
, vol.20
, pp. 634-641
-
-
Salazar, C.1
Brümmer, A.2
Alberghina, L.3
Höfer, T.4
-
33
-
-
33745214419
-
Structure of the Tfb1/p53 complex: Insights into the interaction between the p62/Tfb1 subunit of TFIIH and the activation domain of p53
-
P. Di Lello, L. M. Jenkins, T. N. Jones, B. D. Nguyen, T. Hara, H. Yamaguchi, J. D. Dikeakos, E. Appella, P. Legault, J. G. Omichinski, Structure of the Tfb1/p53 complex: Insights into the interaction between the p62/Tfb1 subunit of TFIIH and the activation domain of p53. Mol. Cell 22, 731-740 (2006).
-
(2006)
Mol. Cell
, vol.22
, pp. 731-740
-
-
Di Lello, P.1
Jenkins, L.M.2
Jones, T.N.3
Nguyen, B.D.4
Hara, T.5
Yamaguchi, H.6
Dikeakos, J.D.7
Appella, E.8
Legault, P.9
Omichinski, J.G.10
-
34
-
-
78650590282
-
Graded enhancement of p53 binding to CREB-binding protein (CBP) by multisite phosphorylation
-
C. W. Lee, J. C. Ferreon, A. C. Ferreon, M. Arai, P. E. Wright, Graded enhancement of p53 binding to CREB-binding protein (CBP) by multisite phosphorylation. Proc. Natl. Acad. Sci. U.S.A. 107, 19290-19295 (2010).
-
(2010)
Proc. Natl. Acad. Sci. U.S.A.
, vol.107
, pp. 19290-19295
-
-
Lee, C.W.1
Ferreon, J.C.2
Ferreon, A.C.3
Arai, M.4
Wright, P.E.5
-
35
-
-
47649098600
-
Cooperativity and biological complexity
-
A. Whitty, Cooperativity and biological complexity. Nat. Chem. Biol. 4, 435-439 (2008).
-
(2008)
Nat. Chem. Biol.
, vol.4
, pp. 435-439
-
-
Whitty, A.1
-
36
-
-
69949148383
-
Recognition of an intra-chain tandem 14-3-3 binding site within PKCe
-
B. Kostelecky, A. T. Saurin, A. Purkiss, P. J. Parker, N. Q. McDonald, Recognition of an intra-chain tandem 14-3-3 binding site within PKCe. EMBO Rep. 10, 983-989 (2009).
-
(2009)
EMBO Rep.
, vol.10
, pp. 983-989
-
-
Kostelecky, B.1
Saurin, A.T.2
Purkiss, A.3
Parker, P.J.4
McDonald, N.Q.5
-
37
-
-
78349254619
-
The LAT story: A tale of cooperativity, coordination, and choreography
-
L. Balagopalan, N. P. Coussens, E. Sherman, L. E. Samelson, C. L. Sommers, The LAT story: A tale of cooperativity, coordination, and choreography. Cold Spring Harb. Perspect. Biol. 2, a005512 (2010).
-
(2010)
Cold Spring Harb. Perspect. Biol.
, vol.2
-
-
Balagopalan, L.1
Coussens, N.P.2
Sherman, E.3
Samelson, L.E.4
Sommers, C.L.5
-
38
-
-
84862776582
-
Phase transitions in the assembly of multivalent signalling proteins
-
P. Li, S. Banjade, H. C. Cheng, S. Kim, B. Chen, L. Guo, M. Llaguno, J. V. Hollingsworth, D. S. King, S. F. Banani, P. S. Russo, Q. X. Jiang, B. T. Nixon, M. K. Rosen, Phase transitions in the assembly of multivalent signalling proteins. Nature 483, 336-340 (2012).
-
(2012)
Nature
, vol.483
, pp. 336-340
-
-
Li, P.1
Banjade, S.2
Cheng, H.C.3
Kim, S.4
Chen, B.5
Guo, L.6
Llaguno, M.7
Hollingsworth, J.V.8
King, D.S.9
Banani, S.F.10
Russo, P.S.11
Jiang, Q.X.12
Nixon, B.T.13
Rosen, M.K.14
-
39
-
-
41949131361
-
An integrin phosphorylation switch: The effect of b3 integrin tail phosphorylation on Dok1 and talin binding
-
C. L. Oxley, N. J. Anthis, E. D. Lowe, I. Vakonakis, I. D. Campbell, K. L. Wegener, An integrin phosphorylation switch: The effect of b3 integrin tail phosphorylation on Dok1 and talin binding. J. Biol. Chem. 283, 5420-5426 (2008).
-
(2008)
J. Biol. Chem.
, vol.283
, pp. 5420-5426
-
-
Oxley, C.L.1
Anthis, N.J.2
Lowe, E.D.3
Vakonakis, I.4
Campbell, I.D.5
Wegener, K.L.6
-
40
-
-
77949455857
-
Dystroglycan versatility in cell adhesion: A tale of multiple motifs
-
C. J. Moore, S. J. Winder, Dystroglycan versatility in cell adhesion: A tale of multiple motifs. Cell Commun. Signal. 8, 3 (2010).
-
(2010)
Cell Commun. Signal.
, vol.8
, pp. 3
-
-
Moore, C.J.1
Winder, S.J.2
-
41
-
-
79959640061
-
A Smad action turnover switch operated by WW domain readers of a phosphoserine code
-
E. Aragón, N. Goerner, A. I. Zaromytidou, Q. Xi, A. Escobedo, J. Massagué, M. J. Macias, A Smad action turnover switch operated by WW domain readers of a phosphoserine code. Genes Dev. 25, 1275-1288 (2011).
-
(2011)
Genes Dev.
, vol.25
, pp. 1275-1288
-
-
Aragón, E.1
Goerner, N.2
Zaromytidou, A.I.3
Xi, Q.4
Escobedo, A.5
Massagué, J.6
Macias, M.J.7
-
42
-
-
82555205273
-
Cascades of multisite phosphorylation control Sic1 destruction at the onset of S phase
-
M. Kõivomägi, E. Valk, R. Venta, A. Iofik, M. Lepiku, E. R. Balog, S. M. Rubin, D. O. Morgan, M. Loog, Cascades of multisite phosphorylation control Sic1 destruction at the onset of S phase. Nature 480, 128-131 (2011).
-
(2011)
Nature
, vol.480
, pp. 128-131
-
-
Koivomägi, M.1
Valk, E.2
Venta, R.3
Iofik, A.4
Lepiku, M.5
Balog, E.R.6
Rubin, S.M.7
Morgan, D.O.8
Loog, M.9
-
43
-
-
84859051901
-
ELM - The database of eukaryotic linear motifs
-
H. Dinkel, S. Michael, R. J.Weatheritt, N. E. Davey, K. Van Roey, B. Altenberg, G. Toedt, B. Uyar, M. Seiler, A. Budd, L. Jödicke, M. A. Dammert, C. Schroeter, M. Hammer, T. Schmidt, P. Jehl, C.McGuigan, M. Dymecka, C. Chica, K. Luck, A. Via, A. Chatr-Aryamontri, N. Haslam, G. Grebnev, R. J. Edwards, M. O. Steinmetz, H. Meiselbach, F. Diella, T. J. Gibson, ELM - The database of eukaryotic linear motifs. Nucleic Acids Res. 40, D242-D251 (2012).
-
(2012)
Nucleic Acids Res.
, vol.40
-
-
Dinkel, H.1
Michael, S.2
Weatheritt, R.J.3
Davey, N.E.4
Van Roey, K.5
Altenberg, B.6
Toedt, G.7
Uyar, B.8
Seiler, M.9
Budd, A.10
Jödicke, L.11
Dammert, M.A.12
Schroeter, C.13
Hammer, M.14
Schmidt, T.15
Jehl, P.16
McGuigan, C.17
Dymecka, M.18
Chica, C.19
Luck, K.20
Via, A.21
Haslam, N.22
Grebnev, G.23
Edwards, R.J.24
Steinmetz, M.O.25
Meiselbach, H.26
Diella, F.27
Gibson, T.J.28
more..
-
44
-
-
84864005203
-
Splice-mediated motif switching regulates Disabled-1 phosphorylation and SH2 domain interactions
-
Z. Gao, H. Y. Poon, L. Li, X. Li, E. Palmesino, D. D. Glubrecht, K. Colwill, I. Dutta, A. Kania, T. Pawson, R. Godbout, Splice-mediated motif switching regulates Disabled-1 phosphorylation and SH2 domain interactions. Mol. Cell. Biol. 32, 2794-2808 (2012).
-
(2012)
Mol. Cell. Biol.
, vol.32
, pp. 2794-2808
-
-
Gao, Z.1
Poon, H.Y.2
Li, L.3
Li, X.4
Palmesino, E.5
Glubrecht, D.D.6
Colwill, K.7
Dutta, I.8
Kania, A.9
Pawson, T.10
Godbout, R.11
-
45
-
-
59649087451
-
Phospho-regulated SUMO interaction modules connect the SUMO system to CK2 signaling
-
P. Stehmeier, S. Muller, Phospho-regulated SUMO interaction modules connect the SUMO system to CK2 signaling. Mol. Cell 33, 400-409 (2009).
-
(2009)
Mol. Cell
, vol.33
, pp. 400-409
-
-
Stehmeier, P.1
Muller, S.2
-
46
-
-
0032168565
-
Phosphorylation regulates association of the transcription factor Pho4 with its import receptor Pse1/Kap121
-
A. Kaffman, N. M. Rank, E. K. O'Shea, Phosphorylation regulates association of the transcription factor Pho4 with its import receptor Pse1/Kap121. Genes Dev. 12, 2673-2683 (1998).
-
(1998)
Genes Dev.
, vol.12
, pp. 2673-2683
-
-
Kaffman, A.1
Rank, N.M.2
O'Shea, E.K.3
-
47
-
-
50449109973
-
Allostery: An illustrated definition for the 'second secret of life'
-
A. W. Fenton, Allostery: An illustrated definition for the 'second secret of life'. Trends Biochem. Sci. 33, 420-425 (2008).
-
(2008)
Trends Biochem. Sci.
, vol.33
, pp. 420-425
-
-
Fenton, A.W.1
-
48
-
-
77953637330
-
Physical mechanisms of signal integration by WASP family proteins
-
S. B. Padrick, M. K. Rosen, Physical mechanisms of signal integration by WASP family proteins. Annu. Rev. Biochem. 79, 707-735 (2010).
-
(2010)
Annu. Rev. Biochem.
, vol.79
, pp. 707-735
-
-
Padrick, S.B.1
Rosen, M.K.2
-
49
-
-
84866597525
-
Allosteric post-translational modification codes
-
R. Nussinov, C. J. Tsai, F. Xin, P. Radivojac, Allosteric post-translational modification codes. Trends Biochem. Sci. 37, 447-455 (2012).
-
(2012)
Trends Biochem. Sci.
, vol.37
, pp. 447-455
-
-
Nussinov, R.1
Tsai, C.J.2
Xin, F.3
Radivojac, P.4
-
50
-
-
78649781976
-
Structural diversity in integrin/talin interactions
-
N. J. Anthis, K. L. Wegener, D. R. Critchley, I. D. Campbell, Structural diversity in integrin/talin interactions. Structure 18, 1654-1666 (2010).
-
(2010)
Structure
, vol.18
, pp. 1654-1666
-
-
Anthis, N.J.1
Wegener, K.L.2
Critchley, D.R.3
Campbell, I.D.4
-
51
-
-
79959318254
-
Isoform-specific dephosphorylation of dynamin1 by calcineurin couples neurotrophin receptor endocytosis to axonal growth
-
D. Bodmer, M. Ascaño, R. Kuruvilla, Isoform-specific dephosphorylation of dynamin1 by calcineurin couples neurotrophin receptor endocytosis to axonal growth. Neuron 70, 1085-1099 (2011).
-
(2011)
Neuron
, vol.70
, pp. 1085-1099
-
-
Bodmer, D.1
Ascaño, M.2
Kuruvilla, R.3
-
52
-
-
78650895035
-
Angiomotin is a novel Hippo pathway component that inhibits YAP oncoprotein
-
B. Zhao, L. Li, Q. Lu, L. H. Wang, C. Y. Liu, Q. Lei, K. L. Guan, Angiomotin is a novel Hippo pathway component that inhibits YAP oncoprotein. Genes Dev. 25, 51-63 (2011).
-
(2011)
Genes Dev.
, vol.25
, pp. 51-63
-
-
Zhao, B.1
Li, L.2
Lu, Q.3
Wang, L.H.4
Liu, C.Y.5
Lei, Q.6
Guan, K.L.7
-
53
-
-
39149088327
-
Differential roles of p80- and p130-angiomotin in the switch between migration and stabilization of endothelial cells
-
M. Ernkvist, O. Birot, I. Sinha, N. Veitonmaki, S. Nyström, K. Aase, L. Holmgren, Differential roles of p80- and p130-angiomotin in the switch between migration and stabilization of endothelial cells. Biochim. Biophys. Acta 1783, 429-437 (2008).
-
(2008)
Biochim. Biophys. Acta
, vol.1783
, pp. 429-437
-
-
Ernkvist, M.1
Birot, O.2
Sinha, I.3
Veitonmaki, N.4
Nyström, S.5
Aase, K.6
Holmgren, L.7
-
54
-
-
77958506612
-
Additional serine/threonine phosphorylation reduces binding affinity but preserves interface topography of substrate proteins to the c-Cbl TKB domain
-
Q. Sun, R. A. Jackson, C. Ng, G. R. Guy, J. Sivaraman, Additional serine/threonine phosphorylation reduces binding affinity but preserves interface topography of substrate proteins to the c-Cbl TKB domain. PLoS One 5, e12819 (2010).
-
(2010)
PLoS One
, vol.5
-
-
Sun, Q.1
Jackson, R.A.2
Ng, C.3
Guy, G.R.4
Sivaraman, J.5
-
55
-
-
25844441096
-
Structural basis of the Cks1-dependent recognition of p27Kip1 by the SCFSkp2 ubiquitin ligase
-
B. Hao, N. Zheng, B. A. Schulman, G. Wu, J. J. Miller, M. Pagano, N. P. Pavletich, Structural basis of the Cks1-dependent recognition of p27Kip1 by the SCFSkp2 ubiquitin ligase. Mol. Cell 20, 9-19 (2005).
-
(2005)
Mol. Cell
, vol.20
, pp. 9-19
-
-
Hao, B.1
Zheng, N.2
Schulman, B.A.3
Wu, G.4
Miller, J.J.5
Pagano, M.6
Pavletich, N.P.7
-
56
-
-
0033915460
-
Characterization of the b-dystroglycan-growth factor receptor 2 (Grb2) interaction
-
K. Russo, E. Di Stasio, G. Macchia, G. Rosa, A. Brancaccio, T. C. Petrucci, Characterization of the b-dystroglycan-growth factor receptor 2 (Grb2) interaction. Biochem. Biophys. Res. Commun. 274, 93-98 (2000).
-
(2000)
Biochem. Biophys. Res. Commun.
, vol.274
, pp. 93-98
-
-
Russo, K.1
Di Stasio, E.2
Macchia, G.3
Rosa, G.4
Brancaccio, A.5
Petrucci, T.C.6
-
57
-
-
0343081091
-
Structure of a WW domain containing fragment of dystrophin in complex with b-dystroglycan
-
X. Huang, F. Poy, R. Zhang, A. Joachimiak, M. Sudol, M. J. Eck, Structure of a WW domain containing fragment of dystrophin in complex with b-dystroglycan. Nat. Struct. Biol. 7, 634-638 (2000).
-
(2000)
Nat. Struct. Biol.
, vol.7
, pp. 634-638
-
-
Huang, X.1
Poy, F.2
Zhang, R.3
Joachimiak, A.4
Sudol, M.5
Eck, M.J.6
-
58
-
-
33748800249
-
Efficient ADAM22 surface expression is mediated by phosphorylation- dependent interaction with 14-3-3 protein family members
-
N. J. Gödde, G. M. D'Abaco, L. Paradiso, U. Novak, Efficient ADAM22 surface expression is mediated by phosphorylation-dependent interaction with 14-3-3 protein family members. J. Cell Sci. 119, 3296-3305 (2006).
-
(2006)
J. Cell Sci.
, vol.119
, pp. 3296-3305
-
-
Gödde, N.J.1
D'Abaco, G.M.2
Paradiso, L.3
Novak, U.4
-
59
-
-
34247238159
-
Crystal structures of autoinhibitory PDZ domain of Tamalin: Implications for metabotropic glutamate receptor trafficking regulation
-
T. Sugi, T. Oyama, T. Muto, S. Nakanishi, K. Morikawa, H. Jingami, Crystal structures of autoinhibitory PDZ domain of Tamalin: Implications for metabotropic glutamate receptor trafficking regulation. EMBO J. 26, 2192-2205 (2007).
-
(2007)
EMBO J.
, vol.26
, pp. 2192-2205
-
-
Sugi, T.1
Oyama, T.2
Muto, T.3
Nakanishi, S.4
Morikawa, K.5
Jingami, H.6
-
60
-
-
22044446356
-
A structure-based model of the c-Myc/Bin1 protein interaction shows alternative splicing of Bin1 and c-Myc phosphorylation are key binding determinants
-
A. Pineda-Lucena, C. S. Ho, D. Y. Mao, Y. Sheng, R. C. Laister, R. Muhandiram, Y. Lu, B. T. Seet, S. Katz, T. Szyperski, L. Z. Penn, C. H. Arrowsmith, A structure-based model of the c-Myc/Bin1 protein interaction shows alternative splicing of Bin1 and c-Myc phosphorylation are key binding determinants. J. Mol. Biol. 351, 182-194 (2005).
-
(2005)
J. Mol. Biol.
, vol.351
, pp. 182-194
-
-
Pineda-Lucena, A.1
Ho, C.S.2
Mao, D.Y.3
Sheng, Y.4
Laister, R.C.5
Muhandiram, R.6
Lu, Y.7
Seet, B.T.8
Katz, S.9
Szyperski, T.10
Penn, L.Z.11
Arrowsmith, C.H.12
-
61
-
-
33744737611
-
14-3-3 Mediates phosphorylation-dependent inhibition of the interaction between the ubiquitin E3 ligase Nedd4-2 and epithelial Na+ channels
-
K. Nagaki, H. Yamamura, S. Shimada, T. Saito, S. Hisanaga, M. Taoka, T. Isobe, T. Ichimura, 14-3-3 Mediates phosphorylation-dependent inhibition of the interaction between the ubiquitin E3 ligase Nedd4-2 and epithelial Na+ channels. Biochemistry 45, 6733-6740 (2006).
-
(2006)
Biochemistry
, vol.45
, pp. 6733-6740
-
-
Nagaki, K.1
Yamamura, H.2
Shimada, S.3
Saito, T.4
Hisanaga, S.5
Taoka, M.6
Isobe, T.7
Ichimura, T.8
-
62
-
-
0034069495
-
Tool for the unification of biology. The Gene Ontology Consortium
-
M. Ashburner, C. A. Ball, J. A. Blake, D. Botstein, H. Butler, J. M. Cherry, A. P. Davis, K. Dolinski, S. S. Dwight, J. T. Eppig, M. A. Harris, D. P. Hill, L. Issel-Tarver, A. Kasarskis, S. Lewis, J. C. Matese, J. E. Richardson, M. Ringwald, G. M. Rubin, G. Sherlock, Gene Ontology: Tool for the unification of biology. The Gene Ontology Consortium. Nat. Genet. 25, 25-29 (2000).
-
(2000)
Nat. Genet.
, vol.25
, pp. 25-29
-
-
Ashburner, M.1
Ball, C.A.2
Blake, J.A.3
Botstein, D.4
Butler, H.5
Cherry, J.M.6
Davis, A.P.7
Dolinski, K.8
Dwight, S.S.9
Eppig, J.T.10
Harris, M.A.11
Hill, D.P.12
Issel-Tarver, L.13
Kasarskis, A.14
Lewis, S.15
Matese, J.C.16
Richardson, J.E.17
Ringwald, M.18
Rubin, G.M.19
Sherlock, G.20
Ontology, G.21
more..
-
63
-
-
84858983547
-
KEGG for integration and interpretation of large-scale molecular data sets
-
M. Kanehisa, S. Goto, Y. Sato, M. Furumichi, M. Tanabe, KEGG for integration and interpretation of large-scale molecular data sets. Nucleic Acids Res. 40, D109-D114 (2012).
-
(2012)
Nucleic Acids Res.
, vol.40
-
-
Kanehisa, M.1
Goto, S.2
Sato, Y.3
Furumichi, M.4
Tanabe, M.5
-
64
-
-
84857047339
-
PhosphoSitePlus: A comprehensive resource for investigating the structure and function of experimentally determined post-translational modifications in man and mouse
-
P. V. Hornbeck, J. M. Kornhauser, S. Tkachev, B. Zhang, E. Skrzypek, B. Murray, V. Latham, M. Sullivan, PhosphoSitePlus: A comprehensive resource for investigating the structure and function of experimentally determined post-translational modifications in man and mouse. Nucleic Acids Res. 40, D261-D270 (2012).
-
(2012)
Nucleic Acids Res.
, vol.40
-
-
Hornbeck, P.V.1
Kornhauser, J.M.2
Tkachev, S.3
Zhang, B.4
Skrzypek, E.5
Murray, B.6
Latham, V.7
Sullivan, M.8
-
65
-
-
78651320816
-
Phospho.ELM: A database of phosphorylation sites - Update 2011
-
H. Dinkel, C. Chica, A. Via, C. M. Gould, L. J. Jensen, T. J. Gibson, F. Diella, Phospho.ELM: A database of phosphorylation sites - Update 2011. Nucleic Acids Res. 39, D261-D267 (2011).
-
(2011)
Nucleic Acids Res.
, vol.39
-
-
Dinkel, H.1
Chica, C.2
Via, A.3
Gould, C.M.4
Jensen, L.J.5
Gibson, T.J.6
Diella, F.7
-
66
-
-
84860833500
-
Reorganizing the protein space at the Universal Protein Resource (UniProt)
-
UniProt Consortium
-
UniProt Consortium, Reorganizing the protein space at the Universal Protein Resource (UniProt). Nucleic Acids Res. 40, D71-D75 (2012).
-
(2012)
Nucleic Acids Res.
, vol.40
-
-
-
67
-
-
84858077472
-
The Pfam protein families database
-
M. Punta, P. C. Coggill, R. Y. Eberhardt, J. Mistry, J. Tate, C. Boursnell, N. Pang, K. Forslund, G. Ceric, J. Clements, A. Heger, L. Holm, E. L. Sonnhammer, S. R. Eddy, A. Bateman, R. D. Finn, The Pfam protein families database. Nucleic Acids Res. 40, D290-D301 (2012).
-
(2012)
Nucleic Acids Res.
, vol.40
-
-
Punta, M.1
Coggill, P.C.2
Eberhardt, R.Y.3
Mistry, J.4
Tate, J.5
Boursnell, C.6
Pang, N.7
Forslund, K.8
Ceric, G.9
Clements, J.10
Heger, A.11
Holm, L.12
Sonnhammer, E.L.13
Eddy, S.R.14
Bateman, A.15
Finn, R.D.16
-
68
-
-
0033954256
-
The protein data bank
-
H. M. Berman, J. Westbrook, Z. Feng, G. Gilliland, T. N. Bhat, H.Weissig, I. N. Shindyalov, P. E. Bourne, The Protein Data Bank. Nucleic Acids Res. 28, 235-242 (2000).
-
(2000)
Nucleic Acids Res.
, vol.28
, pp. 235-242
-
-
Berman, H.M.1
Westbrook, J.2
Feng, Z.3
Gilliland, G.4
Bhat, T.N.5
Weissig, H.6
Shindyalov, I.N.7
Bourne, P.E.8
-
69
-
-
24044538903
-
IUPred: Web server for the prediction of intrinsically unstructured regions of proteins based on estimated energy content
-
Z. Dosztányi, V. Csizmok, P. Tompa, I. Simon, IUPred: Web server for the prediction of intrinsically unstructured regions of proteins based on estimated energy content. Bioinformatics 21, 3433-3434 (2005).
-
(2005)
Bioinformatics
, vol.21
, pp. 3433-3434
-
-
Dosztányi, Z.1
Csizmok, V.2
Tompa, P.3
Simon, I.4
-
70
-
-
75549092202
-
Chemical Entities of Biological Interest: An update
-
P. de Matos, R. Alcántara, A. Dekker, M. Ennis, J. Hastings, K. Haug, I. Spiteri, S. Turner, C. Steinbeck, Chemical Entities of Biological Interest: An update. Nucleic Acids Res. 38, D249-D254 (2010).
-
(2010)
Nucleic Acids Res.
, vol.38
-
-
De Matos, P.1
Alcántara, R.2
Dekker, A.3
Ennis, M.4
Hastings, J.5
Haug, K.6
Spiteri, I.7
Turner, S.8
Steinbeck, C.9
-
71
-
-
78651317925
-
The European nucleotide archive
-
R. Leinonen, R. Akhtar, E. Birney, L. Bower, A. Cerdeño- Tárraga, Y. Cheng, I. Cleland, N. Faruque, N. Goodgame, R. Gibson, G. Hoad, M. Jang, N. Pakseresht, S. Plaister, R. Radhakrishnan, K. Reddy, S. Sobhany, P. Ten Hoopen, R. Vaughan, V. Zalunin, G. Cochrane, The European Nucleotide Archive. Nucleic Acids Res. 39, D28-D31 (2011).
-
(2011)
Nucleic Acids Res.
, vol.39
-
-
Leinonen, R.1
Akhtar, R.2
Birney, E.3
Bower, L.4
Cerdeno-Tárraga, A.5
Cheng, Y.6
Cleland, I.7
Faruque, N.8
Goodgame, N.9
Gibson, R.10
Hoad, G.11
Jang, M.12
Pakseresht, N.13
Plaister, S.14
Radhakrishnan, R.15
Reddy, K.16
Sobhany, S.17
Ten Hoopen, P.18
Vaughan, R.19
Zalunin, V.20
Cochrane, G.21
more..
-
72
-
-
84858602406
-
InterPro in 2011: New developments in the family and domain prediction database
-
S. Hunter, P. Jones, A. Mitchell, R. Apweiler, T. K. Attwood, A. Bateman, T. Bernard, D. Binns, P. Bork, S. Burge, E. de Castro, P. Coggill, M. Corbett, U. Das, L. Daugherty, L. Duquenne, R. D. Finn, M. Fraser, J. Gough, D. Haft, N. Hulo, D. Kahn, E. Kelly, I. Letunic, D. Lonsdale, R. Lopez, M. Madera, J. Maslen, C. McAnulla, J. McDowall, C. McMenamin, H. Mi, P. Mutowo-Muellenet, N. Mulder, D. Natale, C. Orengo, S. Pesseat, M. Punta, A. F. Quinn, C. Rivoire, A. Sangrador-Vegas, J. D. Selengut, C. J. Sigrist, M. Scheremetjew, J. Tate, M. Thimmajanarthanan, P. D. Thomas, C. H. Wu, C. Yeats, S. Y. Yong, InterPro in 2011: New developments in the family and domain prediction database. Nucleic Acids Res. 40, D306-D312 (2012).
-
(2012)
Nucleic Acids Res.
, vol.40
-
-
Hunter, S.1
Jones, P.2
Mitchell, A.3
Apweiler, R.4
Attwood, T.K.5
Bateman, A.6
Bernard, T.7
Binns, D.8
Bork, P.9
Burge, S.10
De Castro, E.11
Coggill, P.12
Corbett, M.13
Das, U.14
Daugherty, L.15
Duquenne, L.16
Finn, R.D.17
Fraser, M.18
Gough, J.19
Haft, D.20
Hulo, N.21
Kahn, D.22
Kelly, E.23
Letunic, I.24
Lonsdale, D.25
Lopez, R.26
Madera, M.27
Maslen, J.28
McAnulla, C.29
McDowall, J.30
McMenamin, C.31
Mi, H.32
Mulder, N.33
Natale, D.34
Orengo, C.35
Pesseat, S.36
Punta, M.37
Quinn, A.F.38
Rivoire, C.39
Selengut, J.D.40
Sigrist, C.J.41
Scheremetjew, M.42
Tate, J.43
Thimmajanarthanan, M.44
Thomas, P.D.45
Wu, C.H.46
Yeats, C.47
Yong, S.Y.48
more..
-
73
-
-
78651275182
-
Reactome: A database of reactions, pathways and biological processes
-
D. Croft, G. O'Kelly, G. Wu, R. Haw, M. Gillespie, L. Matthews, M. Caudy, P. Garapati, G. Gopinath, B. Jassal, S. Jupe, I. Kalatskaya, S. Mahajan, B. May, N. Ndegwa, E. Schmidt, V. Shamovsky, C. Yung, E. Birney, H. Hermjakob, P. D'Eustachio, L. Stein, Reactome: A database of reactions, pathways and biological processes. Nucleic Acids Res. 39, D691-D697 (2011).
-
(2011)
Nucleic Acids Res.
, vol.39
-
-
Croft, D.1
O'Kelly, G.2
Wu, G.3
Haw, R.4
Gillespie, M.5
Matthews, L.6
Caudy, M.7
Garapati, P.8
Gopinath, G.9
Jassal, B.10
Jupe, S.11
Kalatskaya, I.12
Mahajan, S.13
May, B.14
Ndegwa, N.15
Schmidt, E.16
Shamovsky, V.17
Yung, C.18
Birney, E.19
Hermjakob, H.20
D'Eustachio, P.21
Stein, L.22
more..
-
74
-
-
47749150659
-
Phosphorylation at Ser473 regulates heterochromatin protein 1 binding and corepressor function of TIF1beta/KAP1
-
C. W. Chang, H. Y. Chou, Y. S. Lin, K. H. Huang, C. J. Chang, T. C. Hsu, S. C. Lee, Phosphorylation at Ser473 regulates heterochromatin protein 1 binding and corepressor function of TIF1beta/KAP1. BMC Mol. Biol. 9, 61 (2008).
-
(2008)
BMC Mol. Biol.
, vol.9
, pp. 61
-
-
Chang, C.W.1
Chou, H.Y.2
Lin, Y.S.3
Huang, K.H.4
Chang, C.J.5
Hsu, T.C.6
Lee, S.C.7
-
75
-
-
49449085504
-
A quantitative atlas of mitotic phosphorylation
-
N. Dephoure, C. Zhou, J. Villén, S. A. Beausoleil, C. E. Bakalarski, S. J. Elledge, S. P. Gygi, A quantitative atlas of mitotic phosphorylation. Proc. Natl. Acad. Sci. U.S.A. 105, 10762-10767 (2008).
-
(2008)
Proc. Natl. Acad. Sci. U.S.A.
, vol.105
, pp. 10762-10767
-
-
Dephoure, N.1
Zhou, C.2
Villén, J.3
Beausoleil, S.A.4
Bakalarski, C.E.5
Elledge, S.J.6
Gygi, S.P.7
-
76
-
-
33645111789
-
Cell death mechanism and protective effect of erythropoietin after focal ischemia in the whisker-barrel cortex of neonatal rats
-
L. Wei, B. H. Han, Y. Li, C. L. Keogh, D. M. Holtzman, S. P. Yu, Cell death mechanism and protective effect of erythropoietin after focal ischemia in the whisker-barrel cortex of neonatal rats. J. Pharmacol. Exp. Ther. 317, 109-116 (2006).
-
(2006)
J. Pharmacol. Exp. Ther.
, vol.317
, pp. 109-116
-
-
Wei, L.1
Han, B.H.2
Li, Y.3
Keogh, C.L.4
Holtzman, D.M.5
Yu, S.P.6
-
77
-
-
33751114189
-
Signal transducers and activators of transcription 5 contributes to erythropoietin-mediated neuroprotection against hippocampal neuronal death after transient global cerebral ischemia
-
F. Zhang, S. Wang, G. Cao, Y. Gao, J. Chen, Signal transducers and activators of transcription 5 contributes to erythropoietin-mediated neuroprotection against hippocampal neuronal death after transient global cerebral ischemia. Neurobiol. Dis. 25, 45-53 (2007).
-
(2007)
Neurobiol. Dis.
, vol.25
, pp. 45-53
-
-
Zhang, F.1
Wang, S.2
Cao, G.3
Gao, Y.4
Chen, J.5
-
78
-
-
0026662127
-
A truncated erythropoietin receptor that fails to prevent programmed cell death of erythroid cells
-
Y. Nakamura, N. Komatsu, H. Nakauchi, A truncated erythropoietin receptor that fails to prevent programmed cell death of erythroid cells. Science 257, 1138-1141 (1992).
-
(1992)
Science
, vol.257
, pp. 1138-1141
-
-
Nakamura, Y.1
Komatsu, N.2
Nakauchi, H.3
-
79
-
-
14644435825
-
Intrinsically unstructured proteins and their functions
-
H. J. Dyson, P. E. Wright, Intrinsically unstructured proteins and their functions. Nat. Rev. Mol. Cell Biol. 6, 197-208 (2005).
-
(2005)
Nat. Rev. Mol. Cell Biol.
, vol.6
, pp. 197-208
-
-
Dyson, H.J.1
Wright, P.E.2
-
80
-
-
57049095821
-
Function and structure of inherently disordered proteins
-
A. K. Dunker, I. Silman, V. N. Uversky, J. L. Sussman, Function and structure of inherently disordered proteins. Curr. Opin. Struct. Biol. 18, 756-764 (2008).
-
(2008)
Curr. Opin. Struct. Biol.
, vol.18
, pp. 756-764
-
-
Dunker, A.K.1
Silman, I.2
Uversky, V.N.3
Sussman, J.L.4
-
81
-
-
77957771797
-
Transient proteinprotein interactions: Structural, functional, and network properties
-
J. R. Perkins, I. Diboun, B. H. Dessailly, J. G. Lees, C. Orengo, Transient proteinprotein interactions: Structural, functional, and network properties. Structure 18, 1233-1243 (2010).
-
(2010)
Structure
, vol.18
, pp. 1233-1243
-
-
Perkins, J.R.1
Diboun, I.2
Dessailly, B.H.3
Lees, J.G.4
Orengo, C.5
-
82
-
-
79958044914
-
Unstructural biology coming of age
-
P. Tompa, Unstructural biology coming of age. Curr. Opin. Struct. Biol. 21, 419-425 (2011).
-
(2011)
Curr. Opin. Struct. Biol.
, vol.21
, pp. 419-425
-
-
Tompa, P.1
-
83
-
-
33746363486
-
Domains, motifs, and scaffolds: The role of modular interactions in the evolution and wiring of cell signaling circuits
-
R. P. Bhattacharyya, A. Remenyi, B. J. Yeh, W. A. Lim, Domains, motifs, and scaffolds: The role of modular interactions in the evolution and wiring of cell signaling circuits. Annu. Rev. Biochem. 75, 655-680 (2006).
-
(2006)
Annu. Rev. Biochem.
, vol.75
, pp. 655-680
-
-
Bhattacharyya, R.P.1
Remenyi, A.2
Yeh, B.J.3
Lim, W.A.4
-
84
-
-
1542358787
-
Prediction and functional analysis of native disorder in proteins from the three kingdoms of life
-
J. J. Ward, J. S. Sodhi, L. J. McGuffin, B. F. Buxton, D. T. Jones, Prediction and functional analysis of native disorder in proteins from the three kingdoms of life. J. Mol. Biol. 337, 635-645 (2004).
-
(2004)
J. Mol. Biol.
, vol.337
, pp. 635-645
-
-
Ward, J.J.1
Sodhi, J.S.2
McGuffin, L.J.3
Buxton, B.F.4
Jones, D.T.5
-
85
-
-
33644550021
-
Structural systems biology: Modelling protein interactions
-
P. Aloy, R. B. Russell, Structural systems biology: Modelling protein interactions. Nat. Rev. Mol. Cell Biol. 7, 188-197 (2006).
-
(2006)
Nat. Rev. Mol. Cell Biol.
, vol.7
, pp. 188-197
-
-
Aloy, P.1
Russell, R.B.2
-
86
-
-
33747824163
-
DILIMOT: Discovery of linear motifs in proteins
-
V. Neduva, R. B. Russell, DILIMOT: Discovery of linear motifs in proteins. Nucleic Acids Res. 34, W350-W355 (2006).
-
(2006)
Nucleic Acids Res.
, vol.34
-
-
Neduva, V.1
Russell, R.B.2
-
87
-
-
79959984707
-
SLiMSearch 2.0: Biological context for short linear motifs in proteins
-
N. E. Davey, N. J. Haslam, D. C. Shields, R. J. Edwards, SLiMSearch 2.0: Biological context for short linear motifs in proteins. Nucleic Acids Res. 39, W56-W60 (2011).
-
(2011)
Nucleic Acids Res.
, vol.39
-
-
Davey, N.E.1
Haslam, N.J.2
Shields, D.C.3
Edwards, R.J.4
-
88
-
-
84864465529
-
IELM - A web server to explore short linear motif-mediated interactions
-
R. J. Weatheritt, P. Jehl, H. Dinkel, T. J. Gibson, iELM - A web server to explore short linear motif-mediated interactions. Nucleic Acids Res. 40, W364-W369 (2012).
-
(2012)
Nucleic Acids Res.
, vol.40
-
-
Weatheritt, R.J.1
Jehl, P.2
Dinkel, H.3
Gibson, T.J.4
-
89
-
-
84858267844
-
Proteome-wide discovery of evolutionary conserved sequences in disordered regions
-
A. N. Nguyen Ba, B. J. Yeh, D. van Dyk, A. R. Davidson, B. J. Andrews, E. L. Weiss, A. M. Moses, Proteome-wide discovery of evolutionary conserved sequences in disordered regions. Sci. Signal. 5, rs1 (2012).
-
(2012)
Sci. Signal.
, vol.5
-
-
Nguyen Ba, A.N.1
Yeh, B.J.2
Van Dyk, D.3
Davidson, A.R.4
Andrews, B.J.5
Weiss, E.L.6
Moses, A.M.7
-
90
-
-
49449097859
-
The PSI-MOD community standard for representation of protein modification data
-
L. Montecchi-Palazzi, R. Beavis, P. A. Binz, R. J. Chalkley, J. Cottrell, D. Creasy, J. Shofstahl, S. L. Seymour, J. S. Garavelli, The PSI-MOD community standard for representation of protein modification data. Nat. Biotechnol. 26, 864-866 (2008).
-
(2008)
Nat. Biotechnol.
, vol.26
, pp. 864-866
-
-
Montecchi-Palazzi, L.1
Beavis, R.2
Binz, P.A.3
Chalkley, R.J.4
Cottrell, J.5
Creasy, D.6
Shofstahl, J.7
Seymour, S.L.8
Garavelli, J.S.9
-
91
-
-
43349092663
-
CompariMotif: Quick and easy comparisons of sequence motifs
-
R. J. Edwards, N. E. Davey, D. C. Shields, CompariMotif: Quick and easy comparisons of sequence motifs. Bioinformatics 24, 1307-1309 (2008).
-
(2008)
Bioinformatics
, vol.24
, pp. 1307-1309
-
-
Edwards, R.J.1
Davey, N.E.2
Shields, D.C.3
-
92
-
-
0034624753
-
Autoinhibition and activation mechanisms of theWiskott-Aldrich syndrome protein
-
A. S. Kim, L. T. Kakalis, N. Abdul-Manan, G. A. Liu, M. K. Rosen, Autoinhibition and activation mechanisms of theWiskott-Aldrich syndrome protein. Nature 404, 151-158 (2000).
-
(2000)
Nature
, vol.404
, pp. 151-158
-
-
Kim, A.S.1
Kakalis, L.T.2
Abdul-Manan, N.3
Liu, G.A.4
Rosen, M.K.5
-
93
-
-
0029063151
-
Analysis of the interaction of ZAP-70 and syk proteintyrosine kinases with the T-cell antigen receptor by plasmon resonance
-
J. Y. Bu, A. S. Shaw, A. C. Chan, Analysis of the interaction of ZAP-70 and syk proteintyrosine kinases with the T-cell antigen receptor by plasmon resonance. Proc. Natl. Acad. Sci. U.S.A. 92, 5106-5110 (1995).
-
(1995)
Proc. Natl. Acad. Sci. U.S.A.
, vol.92
, pp. 5106-5110
-
-
Bu, J.Y.1
Shaw, A.S.2
Chan, A.C.3
-
94
-
-
0030739987
-
Functional analysis of immunoreceptor tyrosine-based activation motif (ITAM)-mediated signal transduction: The two YxxL segments within a single CD3z-ITAM are functionally distinct
-
R. Sunder-Plassmann, F. Lialios, M. Madsen, S. Koyasu, E. L. Reinherz, Functional analysis of immunoreceptor tyrosine-based activation motif (ITAM)-mediated signal transduction: The two YxxL segments within a single CD3z-ITAM are functionally distinct. Eur. J. Immunol. 27, 2001-2009 (1997).
-
(1997)
Eur. J. Immunol.
, vol.27
, pp. 2001-2009
-
-
Sunder-Plassmann, R.1
Lialios, F.2
Madsen, M.3
Koyasu, S.4
Reinherz, E.L.5
|