-
1
-
-
0024376173
-
Ras Oncogenes in Human Cancer: A Review
-
J. L. Bos Ras Oncogenes in Human Cancer: A Review Cancer Res. 1989 49 4682 4689
-
(1989)
Cancer Res.
, vol.49
, pp. 4682-4689
-
-
Bos, J.L.1
-
2
-
-
79958735965
-
Actomyosin-Mediated Cellular Tension Drives Increased Tissue Stiffness and beta-Catenin Activation to Induce Epidermal Hyperplasia and Tumor Growth
-
M. S. Samuel J. I. Lopez E. J. McGhee D. R. Croft D. Strachan P. Timpson J. Munro E. Schroder J. Zhou V. G. Brunton N. Barker H. Clevers O. J. Sansom K. I. Anderson V. M. Weaver M. F. Olson Actomyosin-Mediated Cellular Tension Drives Increased Tissue Stiffness and beta-Catenin Activation to Induce Epidermal Hyperplasia and Tumor Growth Cancer Cell 2011 19 776 791
-
(2011)
Cancer Cell
, vol.19
, pp. 776-791
-
-
Samuel, M.S.1
Lopez, J.I.2
McGhee, E.J.3
Croft, D.R.4
Strachan, D.5
Timpson, P.6
Munro, J.7
Schroder, E.8
Zhou, J.9
Brunton, V.G.10
Barker, N.11
Clevers, H.12
Sansom, O.J.13
Anderson, K.I.14
Weaver, V.M.15
Olson, M.F.16
-
3
-
-
0031042493
-
Rho, Rac and Cdc42 GTPases regulate the organization of the actin cytoskeleton
-
N. Tapon A. Hall Rho, Rac and Cdc42 GTPases regulate the organization of the actin cytoskeleton Curr. Opin. Cell Biol. 1997 9 86 92
-
(1997)
Curr. Opin. Cell Biol.
, vol.9
, pp. 86-92
-
-
Tapon, N.1
Hall, A.2
-
4
-
-
33645457715
-
Physiological role of ROCKs in the cardiovascular system
-
K. Noma N. Oyama J. K. Liao Physiological role of ROCKs in the cardiovascular system Am. J. Physiol. 2006 290 C661 C668
-
(2006)
Am. J. Physiol.
, vol.290
-
-
Noma, K.1
Oyama, N.2
Liao, J.K.3
-
5
-
-
62249102189
-
The role of the RhoA/rho-kinase pathway in pulmonary hypertension
-
B. D. Nossaman P. J. Kadowitz The role of the RhoA/rho-kinase pathway in pulmonary hypertension Curr. Drug Discovery Technol. 2009 6 59 71
-
(2009)
Curr. Drug Discovery Technol.
, vol.6
, pp. 59-71
-
-
Nossaman, B.D.1
Kadowitz, P.J.2
-
6
-
-
77955512464
-
Rho-kinase inhibition: A novel therapeutic target for the treatment of cardiovascular diseases
-
M. Dong B. P. Yan J. K. Liao Y. Y. Lam G. W. K. Yip C. M. Yu Rho-kinase inhibition: a novel therapeutic target for the treatment of cardiovascular diseases Drug Discovery Today 2010 15 622 629
-
(2010)
Drug Discovery Today
, vol.15
, pp. 622-629
-
-
Dong, M.1
Yan, B.P.2
Liao, J.K.3
Lam, Y.Y.4
Yip, G.W.K.5
Yu, C.M.6
-
7
-
-
79952455313
-
Rho-associated coiled-coil-forming kinases (ROCKs): Potential targets for the treatment of atherosclerosis and vascular disease
-
Q. A. Zhou C. Gensch J. K. Liao Rho-associated coiled-coil-forming kinases (ROCKs): potential targets for the treatment of atherosclerosis and vascular disease Trends Pharmacol. Sci. 2011 32 167 173
-
(2011)
Trends Pharmacol. Sci.
, vol.32
, pp. 167-173
-
-
Zhou, Q.A.1
Gensch, C.2
Liao, J.K.3
-
10
-
-
72249097073
-
Inhibition of Rho-Associated Kinase Signaling Prevents Breast Cancer Metastasis to Human Bone
-
S. J. Liu R. H. Goldstein E. M. Scepansky M. Rosenblatt Inhibition of Rho-Associated Kinase Signaling Prevents Breast Cancer Metastasis to Human Bone Cancer Res. 2009 69 8742 8751
-
(2009)
Cancer Res.
, vol.69
, pp. 8742-8751
-
-
Liu, S.J.1
Goldstein, R.H.2
Scepansky, E.M.3
Rosenblatt, M.4
-
12
-
-
78649475276
-
-
The Rho GTPases in Cancer, ed. K. Golen, Springer, New York
-
G. R. Wickman, M. S. Samuel, P. A. Lochhead and M. F. Olson, The Rho-Regulated ROCK Kinases in Cancer, The Rho GTPases in Cancer, ed., K. Golen, Springer, New York, 2010, pp. 163-192
-
(2010)
The Rho-Regulated ROCK Kinases in Cancer
, pp. 163-192
-
-
Wickman, G.R.1
Samuel, M.S.2
Lochhead, P.A.3
Olson, M.F.4
-
15
-
-
0030603119
-
ROCK-I and ROCK-II, two isoforms of Rho-associated coiled-coil forming protein serine/threonine kinase in mice
-
O. Nakagawa K. Fujisawa T. Ishizaki Y. Saito K. Nakao S. Narumiya ROCK-I and ROCK-II, two isoforms of Rho-associated coiled-coil forming protein serine/threonine kinase in mice FEBS Lett. 1996 392 189 193
-
(1996)
FEBS Lett.
, vol.392
, pp. 189-193
-
-
Nakagawa, O.1
Fujisawa, K.2
Ishizaki, T.3
Saito, Y.4
Nakao, K.5
Narumiya, S.6
-
16
-
-
18944372230
-
Rho kinase, a promising drug target for neurological disorders
-
B. K. Mueller H. Mack N. Teusch Rho kinase, a promising drug target for neurological disorders Nat. Rev. Drug Discovery 2005 4 387 398
-
(2005)
Nat. Rev. Drug Discovery
, vol.4
, pp. 387-398
-
-
Mueller, B.K.1
Mack, H.2
Teusch, N.3
-
18
-
-
72049085036
-
Benzothiazoles as Rho-associated kinase (ROCK-II) inhibitors
-
Y. Yin L. Lin C. Ruiz M. D. Cameron J. Pocas W. Grant T. Schroter W. M. Chen D. Duckett S. Schurer P. LoGrasso Y. B. Feng Benzothiazoles as Rho-associated kinase (ROCK-II) inhibitors Bioorg. Med. Chem. Lett. 2009 19 6686 6690
-
(2009)
Bioorg. Med. Chem. Lett.
, vol.19
, pp. 6686-6690
-
-
Yin, Y.1
Lin, L.2
Ruiz, C.3
Cameron, M.D.4
Pocas, J.5
Grant, W.6
Schroter, T.7
Chen, W.M.8
Duckett, D.9
Schurer, S.10
Lograsso, P.11
Feng, Y.B.12
-
19
-
-
79952361695
-
Synthesis and biological evaluation of 4-quinazolinones as Rho kinase inhibitors
-
X. A. Fang Y. T. Chen E. H. Sessions S. Chowdhury T. Vojkovsky Y. Yin J. R. Pocas W. Grant T. Schroter L. Lin C. Ruiz M. D. Cameron P. LoGrasso T. D. Bannister Y. B. Feng Synthesis and biological evaluation of 4-quinazolinones as Rho kinase inhibitors Bioorg. Med. Chem. Lett. 2011 21 1844 1848
-
(2011)
Bioorg. Med. Chem. Lett.
, vol.21
, pp. 1844-1848
-
-
Fang, X.A.1
Chen, Y.T.2
Sessions, E.H.3
Chowdhury, S.4
Vojkovsky, T.5
Yin, Y.6
Pocas, J.R.7
Grant, W.8
Schroter, T.9
Lin, L.10
Ruiz, C.11
Cameron, M.D.12
Lograsso, P.13
Bannister, T.D.14
Feng, Y.B.15
-
20
-
-
70349235617
-
Pharmacological characterization of SAR407899, a novel rho-kinase inhibitor
-
M. Lohn O. Plettenburg Y. Ivashchenko A. Kannt A. Hofmeister D. Kadereit M. Schaefer W. Linz M. Kohlmann J. M. Herbert Pharmacological characterization of SAR407899, a novel rho-kinase inhibitor Hypertension 2009 54 676 683
-
(2009)
Hypertension
, vol.54
, pp. 676-683
-
-
Lohn, M.1
Plettenburg, O.2
Ivashchenko, Y.3
Kannt, A.4
Hofmeister, A.5
Kadereit, D.6
Schaefer, M.7
Linz, W.8
Kohlmann, M.9
Herbert, J.M.10
-
21
-
-
80054998108
-
Ocular Hypotensive Effect of the Rho Kinase Inhibitor AR-12286 in Patients with Glaucoma and Ocular Hypertension
-
R. D. Williams G. D. Novack T. Van Haarlem C. Kopczynski Ocular Hypotensive Effect of the Rho Kinase Inhibitor AR-12286 in Patients With Glaucoma and Ocular Hypertension Am. J. Ophthalmol. 2011 152 834 841
-
(2011)
Am. J. Ophthalmol.
, vol.152
, pp. 834-841
-
-
Williams, R.D.1
Novack, G.D.2
Van Haarlem, T.3
Kopczynski, C.4
-
22
-
-
79958807531
-
Novel ocular antihypertensive compounds in clinical trials
-
J. Chen S. A. Runyan M. R. Robinson Novel ocular antihypertensive compounds in clinical trials Clin. Ophthalmol. 2011 5 667
-
(2011)
Clin. Ophthalmol.
, vol.5
, pp. 667
-
-
Chen, J.1
Runyan, S.A.2
Robinson, M.R.3
-
23
-
-
33646577132
-
Targeting Rho to stimulate repair after spinal cord injury
-
L. McKerracher H. Higuchi Targeting Rho to stimulate repair after spinal cord injury J. Neurotrauma 2006 23 309 317
-
(2006)
J. Neurotrauma
, vol.23
, pp. 309-317
-
-
McKerracher, L.1
Higuchi, H.2
-
24
-
-
18944372230
-
Rho kinase, a promising drug target for neurological disorders
-
B. K. Mueller H. Mack N. Teusch Rho kinase, a promising drug target for neurological disorders Nat. Rev. Drug Discovery 2005 4 387 398
-
(2005)
Nat. Rev. Drug Discovery
, vol.4
, pp. 387-398
-
-
Mueller, B.K.1
Mack, H.2
Teusch, N.3
-
25
-
-
33846108633
-
BindingDB: A web-accessible database of experimentally determined protein-ligand binding affinities
-
T. Liu Y. Lin X. Wen R. N. Jorissen M. K. Gilson BindingDB: a web-accessible database of experimentally determined protein-ligand binding affinities Nucleic Acids Res. 2007 35 D198 D201
-
(2007)
Nucleic Acids Res.
, vol.35
-
-
Liu, T.1
Lin, Y.2
Wen, X.3
Jorissen, R.N.4
Gilson, M.K.5
-
26
-
-
71749108355
-
Triazine and pyrimidine based ROCK inhibitors with efficacy in spontaneous hypertensive rat model
-
K.-K. Ho J. R. Beasley L. Belanger D. Black J.-H. Chan D. Dunn B. Hu A. Klon S. G. Kultgen M. Ohlmeyer S. M. Parlato P. C. Ray Q. Pham Y. Rong A. L. Roughton T. L. Walker J. Wright K. Xu Y. Xu L. Zhang M. Webb Triazine and pyrimidine based ROCK inhibitors with efficacy in spontaneous hypertensive rat model Bioorg. Med. Chem. Lett. 2009 19 6027 6031
-
(2009)
Bioorg. Med. Chem. Lett.
, vol.19
, pp. 6027-6031
-
-
Ho, K.-K.1
Beasley, J.R.2
Belanger, L.3
Black, D.4
Chan, J.-H.5
Dunn, D.6
Hu, B.7
Klon, A.8
Kultgen, S.G.9
Ohlmeyer, M.10
Parlato, S.M.11
Ray, P.C.12
Pham, Q.13
Rong, Y.14
Roughton, A.L.15
Walker, T.L.16
Wright, J.17
Xu, K.18
Xu, Y.19
Zhang, L.20
Webb, M.21
more..
-
28
-
-
0035913529
-
Evaluation and reparametrization of the OPLS-AA force field for proteins via comparison with accurate quantum chemical calculations on peptides
-
G. A. Kaminski R. A. Friesner J. Tirado-Rives W. L. Jorgensen Evaluation and reparametrization of the OPLS-AA force field for proteins via comparison with accurate quantum chemical calculations on peptides J. Phys. Chem. B 2001 105 6474 6487
-
(2001)
J. Phys. Chem. B
, vol.105
, pp. 6474-6487
-
-
Kaminski, G.A.1
Friesner, R.A.2
Tirado-Rives, J.3
Jorgensen, W.L.4
-
29
-
-
84875837142
-
-
LLC, New York. In NY
-
M. Schrödinger, LLC, New York. In NY, 2009
-
(2009)
-
-
Schrödinger, M.1
-
32
-
-
33748518255
-
Comparison of multiple Amber force fields and development of improved protein backbone parameters
-
V. Hornak R. Abel A. Okur B. Strockbine A. Roitberg C. Simmerling Comparison of multiple Amber force fields and development of improved protein backbone parameters Proteins: Struct., Funct., Bioinf. 2006 65 712 725
-
(2006)
Proteins: Struct., Funct., Bioinf.
, vol.65
, pp. 712-725
-
-
Hornak, V.1
Abel, R.2
Okur, A.3
Strockbine, B.4
Roitberg, A.5
Simmerling, C.6
-
33
-
-
11244282931
-
-
Gaussian, Inc, Wallingford, CT
-
M. Frisch, G. Trucks, H. Schlegel, G. Scuseria, M. Robb, J. Cheeseman, J. Montgomery Jr, T. Vreven, K. Kudin and J. Burant, Gaussian 03, revision D. 01, Gaussian, Inc, Wallingford, CT, 2004
-
(2004)
Gaussian 03, Revision D. 01
-
-
Frisch, M.1
Trucks, G.2
Schlegel, H.3
Scuseria, G.4
Robb, M.5
Cheeseman, J.6
Montgomery Jr., J.7
Vreven, T.8
Kudin, K.9
Burant, J.10
-
34
-
-
3042524904
-
Well-behaved electrostatic potential based method using charge restraints for deriving atomic charges: The RESP model
-
C. I. Bayly P. Cieplak W. D. Cornell P. A. A. Kollman Well-behaved electrostatic potential based method using charge restraints for deriving atomic charges: the RESP model J. Phys. Chem. 1993 97 10269 10280
-
(1993)
J. Phys. Chem.
, vol.97
, pp. 10269-10280
-
-
Bayly, C.I.1
Cieplak, P.2
Cornell, W.D.3
Kollman, P.A.A.4
-
35
-
-
33846823909
-
Particle mesh Ewald: An W log (N) method for Ewald sums in large systems
-
T. Darden D. York L. Pedersen Particle mesh Ewald: an W log (N) method for Ewald sums in large systems J. Chem. Phys. 1993 98 10089 10092
-
(1993)
J. Chem. Phys.
, vol.98
, pp. 10089-10092
-
-
Darden, T.1
York, D.2
Pedersen, L.3
-
36
-
-
33646940952
-
Numerical integration of the cartesian equations of motion of a system with constraints: Molecular dynamics of n-alkanes
-
J. P. Ryckaert G. Ciccotti H. J. C. Berendsen Numerical integration of the cartesian equations of motion of a system with constraints: molecular dynamics of n-alkanes J. Comput. Chem. 1977 23 327 341
-
(1977)
J. Comput. Chem.
, vol.23
, pp. 327-341
-
-
Ryckaert, J.P.1
Ciccotti, G.2
Berendsen, H.J.C.3
-
37
-
-
23444454552
-
The Amber biomolecular simulation programs
-
D. A. Case T. E. Cheatham T. Darden H. Gohlke R. Luo K. M. Merz A. Onufriev C. Simmerling B. Wang R. J. Woods The Amber biomolecular simulation programs J. Comput. Chem. 2005 26 1668 1688
-
(2005)
J. Comput. Chem.
, vol.26
, pp. 1668-1688
-
-
Case, D.A.1
Cheatham, T.E.2
Darden, T.3
Gohlke, H.4
Luo, R.5
Merz, K.M.6
Onufriev, A.7
Simmerling, C.8
Wang, B.9
Woods, R.J.10
-
38
-
-
33748637571
-
Recent advances in free energy calculations with a combination of molecular mechanics and continuum models
-
J. M. Wang T. J. Hou X. J. Xu Recent advances in free energy calculations with a combination of molecular mechanics and continuum models Curr. Comput.-Aided Drug Des. 2006 2 287 306
-
(2006)
Curr. Comput.-Aided Drug Des.
, vol.2
, pp. 287-306
-
-
Wang, J.M.1
Hou, T.J.2
Xu, X.J.3
-
39
-
-
33947644064
-
Molecular dynamics and free energy studies on the wild-type and double mutant HIV-1 protease complexed with amprenavir and two amprenavir-related inhibitors: Mechanism for binding and drug resistance
-
T. Hou R. Yu Molecular dynamics and free energy studies on the wild-type and double mutant HIV-1 protease complexed with amprenavir and two amprenavir-related inhibitors: mechanism for binding and drug resistance J. Med. Chem. 2007 50 1177 1188
-
(2007)
J. Med. Chem.
, vol.50
, pp. 1177-1188
-
-
Hou, T.1
Yu, R.2
-
40
-
-
77953267929
-
In silico identification of the potential drug resistance sites over 2009 influenza A (H1N1) virus neuraminidase
-
H. Liu X. Yao C. Wang J. Han In silico identification of the potential drug resistance sites over 2009 influenza A (H1N1) virus neuraminidase Mol. Pharmaceutics 2010 7 894 904
-
(2010)
Mol. Pharmaceutics
, vol.7
, pp. 894-904
-
-
Liu, H.1
Yao, X.2
Wang, C.3
Han, J.4
-
41
-
-
76549102880
-
Detecting and understanding combinatorial mutation patterns responsible for HIV drug resistance
-
J. Zhang T. Hou W. Wang J. S. Liu Detecting and understanding combinatorial mutation patterns responsible for HIV drug resistance Proc. Natl. Acad. Sci. U. S. A. 2010 107 1321 1326
-
(2010)
Proc. Natl. Acad. Sci. U. S. A.
, vol.107
, pp. 1321-1326
-
-
Zhang, J.1
Hou, T.2
Wang, W.3
Liu, J.S.4
-
42
-
-
79951996670
-
Assessing the performance of the molecular mechanics/Poisson Boltzmann surface area and molecular mechanics/generalized Born surface area methods. II. The accuracy of ranking poses generated from docking
-
T. J. Hou J. Wang Y. Y. Li W. Wang Assessing the performance of the molecular mechanics/Poisson Boltzmann surface area and molecular mechanics/generalized Born surface area methods. II. The accuracy of ranking poses generated from docking J. Comput. Chem. 2011 32 866 877
-
(2011)
J. Comput. Chem.
, vol.32
, pp. 866-877
-
-
Hou, T.J.1
Wang, J.2
Li, Y.Y.3
Wang, W.4
-
43
-
-
79952588669
-
Assessing the performance of the MM/PBSA and MM/GBSA methods. 1. The accuracy of binding free energy calculations based on molecular dynamics simulations
-
T. J. Hou J. M. Wang Y. Y. Li W. Wang Assessing the performance of the MM/PBSA and MM/GBSA methods. 1. The accuracy of binding free energy calculations based on molecular dynamics simulations J. Chem. Inf. Model. 2011 51 69 82
-
(2011)
J. Chem. Inf. Model.
, vol.51
, pp. 69-82
-
-
Hou, T.J.1
Wang, J.M.2
Li, Y.Y.3
Wang, W.4
-
44
-
-
84355166397
-
Molecular modeling study on the resistance mechanism of HCV NS3/4A serine protease mutants R155K, A156V and D168A to TMC435
-
W. W. Xue D. B. Pan Y. Yang H. X. Liu X. J. Yao Molecular modeling study on the resistance mechanism of HCV NS3/4A serine protease mutants R155K, A156V and D168A to TMC435 Antiviral Res. 2012 93 126 137
-
(2012)
Antiviral Res.
, vol.93
, pp. 126-137
-
-
Xue, W.W.1
Pan, D.B.2
Yang, Y.3
Liu, H.X.4
Yao, X.J.5
-
45
-
-
84857282935
-
Free Energy Calculations by the Molecular Mechanics Poisson-Boltzmann Surface Area Method
-
N. Homeyer H. Gohlke Free Energy Calculations by the Molecular Mechanics Poisson-Boltzmann Surface Area Method Mol. Inf. 2012 31 114 122
-
(2012)
Mol. Inf.
, vol.31
, pp. 114-122
-
-
Homeyer, N.1
Gohlke, H.2
-
46
-
-
0034521981
-
Calculating structures and free energies of complex molecules: Combining molecular mechanics and continuum models
-
P. A. Kollman I. Massova C. Reyes B. Kuhn S. Huo L. Chong M. Lee T. Lee Y. Duan W. Wang Calculating structures and free energies of complex molecules: combining molecular mechanics and continuum models Acc. Chem. Res. 2000 33 889 897
-
(2000)
Acc. Chem. Res.
, vol.33
, pp. 889-897
-
-
Kollman, P.A.1
Massova, I.2
Reyes, C.3
Kuhn, B.4
Huo, S.5
Chong, L.6
Lee, M.7
Lee, T.8
Duan, Y.9
Wang, W.10
-
47
-
-
0037187412
-
Molecular dynamics and free energy analyses of cathepsin d-inhibitor interactions: Insight into structure-based ligand design
-
S. Huo J. Wang P. Cieplak P. A. Kollman I. D. Kuntz Molecular dynamics and free energy analyses of cathepsin d-inhibitor interactions: insight into structure-based ligand design J. Med. Chem. 2002 45 1412 1419
-
(2002)
J. Med. Chem.
, vol.45
, pp. 1412-1419
-
-
Huo, S.1
Wang, J.2
Cieplak, P.3
Kollman, P.A.4
Kuntz, I.D.5
-
48
-
-
0037208314
-
Mapping the binding site of a large set of quinazoline type EGF-R inhibitors using molecular field analyses and molecular docking studies
-
T. J. Hou L. L. Zhu L. R. Chen X. J. Xu Mapping the binding site of a large set of quinazoline type EGF-R inhibitors using molecular field analyses and molecular docking studies J. Chem. Inf. Comput. Sci. 2003 43 273 287
-
(2003)
J. Chem. Inf. Comput. Sci.
, vol.43
, pp. 273-287
-
-
Hou, T.J.1
Zhu, L.L.2
Chen, L.R.3
Xu, X.J.4
-
49
-
-
20444377245
-
Validation and use of the MM-PBSA approach for drug discovery
-
B. Kuhn P. Gerber T. Schulz-Gasch M. Stahl Validation and use of the MM-PBSA approach for drug discovery J. Med. Chem. 2005 48 4040 4048
-
(2005)
J. Med. Chem.
, vol.48
, pp. 4040-4048
-
-
Kuhn, B.1
Gerber, P.2
Schulz-Gasch, T.3
Stahl, M.4
-
50
-
-
84961980685
-
Binding of a diverse set of ligands to avidin and streptavidin: An accurate quantitative prediction of their relative affinities by a combination of molecular mechanics and continuum solvent models
-
B. Kuhn P. A. Kollman Binding of a diverse set of ligands to avidin and streptavidin: an accurate quantitative prediction of their relative affinities by a combination of molecular mechanics and continuum solvent models J. Med. Chem. 2000 43 3786 3791
-
(2000)
J. Med. Chem.
, vol.43
, pp. 3786-3791
-
-
Kuhn, B.1
Kollman, P.A.2
-
51
-
-
0037079570
-
Computational alanine scanning of the 1:1 human growth hormone-receptor complex
-
S. Huo I. Massova P. A. Kollman Computational alanine scanning of the 1:1 human growth hormone-receptor complex J. Comput. Chem. 2002 23 15 27
-
(2002)
J. Comput. Chem.
, vol.23
, pp. 15-27
-
-
Huo, S.1
Massova, I.2
Kollman, P.A.3
-
52
-
-
79952588669
-
Assessing the Performance of the MM/PBSA and MM/GBSA Methods. 1. The Accuracy of Binding Free Energy Calculations Based on Molecular Dynamics Simulations
-
T. Hou J. Wang Y. Li W. Wang Assessing the Performance of the MM/PBSA and MM/GBSA Methods. 1. The Accuracy of Binding Free Energy Calculations Based on Molecular Dynamics Simulations J. Chem. Inf. Model. 2011 51 69 82
-
(2011)
J. Chem. Inf. Model.
, vol.51
, pp. 69-82
-
-
Hou, T.1
Wang, J.2
Li, Y.3
Wang, W.4
-
53
-
-
1842479952
-
Exploring protein native states and large-scale conformational changes with a modified generalized born model
-
A. Onufriev D. Bashford D. A. Case Exploring protein native states and large-scale conformational changes with a modified generalized born model Proteins 2004 55 383 394
-
(2004)
Proteins
, vol.55
, pp. 383-394
-
-
Onufriev, A.1
Bashford, D.2
Case, D.A.3
-
54
-
-
0000408363
-
Approximate atomic surfaces from linear combinations of pairwise overlaps (LCPO)
-
J. Weiser P. S. Shenkin W. C. Still Approximate atomic surfaces from linear combinations of pairwise overlaps (LCPO) J. Comput. Chem. 1999 20 217 230
-
(1999)
J. Comput. Chem.
, vol.20
, pp. 217-230
-
-
Weiser, J.1
Shenkin, P.S.2
Still, W.C.3
-
56
-
-
39049111013
-
Characterization of domain-peptide interaction interface: A case study on the amphiphysin-1 SH3 domain
-
T. Hou W. Zhang D. A. Case W. Wang Characterization of domain-peptide interaction interface: a case study on the amphiphysin-1 SH3 domain J. Mol. Biol. 2008 376 1201 1214
-
(2008)
J. Mol. Biol.
, vol.376
, pp. 1201-1214
-
-
Hou, T.1
Zhang, W.2
Case, D.A.3
Wang, W.4
-
57
-
-
0043245780
-
Insights into protein-protein binding by binding free energy calculation and free energy decomposition for the Ras-Raf and Ras-RaIGDS complexes
-
H. Gohlke C. Kiel D. A. Case Insights into protein-protein binding by binding free energy calculation and free energy decomposition for the Ras-Raf and Ras-RaIGDS complexes J. Mol. Biol. 2003 330 891 913
-
(2003)
J. Mol. Biol.
, vol.330
, pp. 891-913
-
-
Gohlke, H.1
Kiel, C.2
Case, D.A.3
-
58
-
-
84860635411
-
Characterization of Domain-peptide Interaction Interface: Prediction of SH3 Domain-Mediated Protein-protein Interaction Network in Yeast by Generic Structure-Based Models
-
T. Hou N. Li Y. Li W. Wang Characterization of Domain-peptide Interaction Interface: Prediction of SH3 Domain-Mediated Protein-protein Interaction Network in Yeast by Generic Structure-Based Models J. Proteome Res. 2012 11 2982
-
(2012)
J. Proteome Res.
, vol.11
, pp. 2982
-
-
Hou, T.1
Li, N.2
Li, Y.3
Wang, W.4
-
60
-
-
61449101624
-
Predicting drug resistance of the HIV-1 protease using molecular interaction energy components
-
T. Hou W. Zhang J. Wang W. Wang Predicting drug resistance of the HIV-1 protease using molecular interaction energy components Proteins: Struct., Funct., Bioinf. 2009 74 837 846
-
(2009)
Proteins: Struct., Funct., Bioinf.
, vol.74
, pp. 837-846
-
-
Hou, T.1
Zhang, W.2
Wang, J.3
Wang, W.4
-
61
-
-
79959405623
-
Prediction of peptides binding to the PKA RII alpha subunit using a hierarchical strategy
-
T. J. Hou Y. Y. Li W. Wang Prediction of peptides binding to the PKA RII alpha subunit using a hierarchical strategy Bioinformatics 2011 27 1814 1821
-
(2011)
Bioinformatics
, vol.27
, pp. 1814-1821
-
-
Hou, T.J.1
Li, Y.Y.2
Wang, W.3
-
62
-
-
84864672616
-
Understanding microscopic binding of macrophage migration inhibitory factor with phenolic hydrazones by molecular docking, molecular dynamics simulations and free energy calculations
-
L. Xu Y. Li S. Zhou T. Hou Understanding microscopic binding of macrophage migration inhibitory factor with phenolic hydrazones by molecular docking, molecular dynamics simulations and free energy calculations Mol. BioSyst. 2012 8 2260
-
(2012)
Mol. BioSyst.
, vol.8
, pp. 2260
-
-
Xu, L.1
Li, Y.2
Zhou, S.3
Hou, T.4
-
63
-
-
79960629696
-
Molecular Modeling Study of Checkpoint Kinase 1 Inhibitors by Multiple Docking Strategies and Prime/MM-GBSA Calculation
-
J. Du H. J. Sun L. L. Xi J. Z. Li Y. Yang H. X. Liu X. J. Yao Molecular Modeling Study of Checkpoint Kinase 1 Inhibitors by Multiple Docking Strategies and Prime/MM-GBSA Calculation J. Comput. Chem. 2011 32 2800 2809
-
(2011)
J. Comput. Chem.
, vol.32
, pp. 2800-2809
-
-
Du, J.1
Sun, H.J.2
Xi, L.L.3
Li, J.Z.4
Yang, Y.5
Liu, H.X.6
Yao, X.J.7
-
64
-
-
79953209388
-
Molecular Dynamics Simulation, Free Energy Calculation and Structure-Based 3D-QSAR Studies of B-RAF Kinase Inhibitors
-
Y. Yang J. Qin H. X. Liu X. J. Yao Molecular Dynamics Simulation, Free Energy Calculation and Structure-Based 3D-QSAR Studies of B-RAF Kinase Inhibitors J. Chem. Inf. Model. 2011 51 680 692
-
(2011)
J. Chem. Inf. Model.
, vol.51
, pp. 680-692
-
-
Yang, Y.1
Qin, J.2
Liu, H.X.3
Yao, X.J.4
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